Multiple sequence alignment - TraesCS3B01G492800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G492800 chr3B 100.000 4031 0 0 1 4031 738627159 738623129 0.000000e+00 7444.0
1 TraesCS3B01G492800 chr3B 82.379 1345 182 32 1284 2585 742110415 742109083 0.000000e+00 1120.0
2 TraesCS3B01G492800 chr3B 82.005 1317 198 22 1284 2578 738591835 738590536 0.000000e+00 1083.0
3 TraesCS3B01G492800 chr3B 81.146 1326 177 37 1297 2578 741968105 741966809 0.000000e+00 996.0
4 TraesCS3B01G492800 chr3B 79.161 1526 248 49 1208 2686 738156608 738155106 0.000000e+00 992.0
5 TraesCS3B01G492800 chr3B 79.750 1358 188 52 1290 2591 738289820 738288494 0.000000e+00 904.0
6 TraesCS3B01G492800 chr3B 86.611 478 50 7 1284 1755 742081228 742080759 2.150000e-142 516.0
7 TraesCS3B01G492800 chr3B 82.565 499 64 16 3401 3889 103906698 103907183 6.230000e-113 418.0
8 TraesCS3B01G492800 chr3B 100.000 30 0 0 3851 3880 103907106 103907135 5.630000e-04 56.5
9 TraesCS3B01G492800 chr3A 93.476 2008 89 17 992 2991 692495689 692493716 0.000000e+00 2944.0
10 TraesCS3B01G492800 chr3A 82.353 1343 183 36 1284 2585 695515187 695516516 0.000000e+00 1118.0
11 TraesCS3B01G492800 chr3A 81.390 1381 202 39 1290 2631 692316285 692314921 0.000000e+00 1075.0
12 TraesCS3B01G492800 chr3A 92.661 654 33 4 1957 2603 691982255 691981610 0.000000e+00 928.0
13 TraesCS3B01G492800 chr3A 79.214 1400 207 50 1290 2631 692057983 692056610 0.000000e+00 896.0
14 TraesCS3B01G492800 chr3A 90.328 548 42 6 1299 1835 691992449 691991902 0.000000e+00 708.0
15 TraesCS3B01G492800 chr3A 85.166 391 29 10 2614 2991 691958522 691958148 1.370000e-99 374.0
16 TraesCS3B01G492800 chr3A 91.371 197 16 1 743 938 692497007 692496811 6.640000e-68 268.0
17 TraesCS3B01G492800 chr3A 83.105 219 21 7 56 259 692499091 692498874 6.880000e-43 185.0
18 TraesCS3B01G492800 chr6B 91.918 928 42 17 2987 3891 633012744 633011827 0.000000e+00 1267.0
19 TraesCS3B01G492800 chr6B 91.720 930 44 13 2982 3888 633043858 633044777 0.000000e+00 1260.0
20 TraesCS3B01G492800 chr6B 91.694 927 43 13 2985 3888 709522440 709523355 0.000000e+00 1254.0
21 TraesCS3B01G492800 chr6B 93.069 101 7 0 3931 4031 633011748 633011648 9.030000e-32 148.0
22 TraesCS3B01G492800 chr6B 93.069 101 7 0 3931 4031 633044859 633044959 9.030000e-32 148.0
23 TraesCS3B01G492800 chr6B 93.069 101 7 0 3931 4031 709523437 709523537 9.030000e-32 148.0
24 TraesCS3B01G492800 chr6B 93.182 44 3 0 3891 3934 633011708 633011665 9.350000e-07 65.8
25 TraesCS3B01G492800 chr6B 93.182 44 3 0 3891 3934 633044899 633044942 9.350000e-07 65.8
26 TraesCS3B01G492800 chr6B 93.182 44 3 0 3891 3934 709523477 709523520 9.350000e-07 65.8
27 TraesCS3B01G492800 chr6D 94.167 840 29 5 3068 3888 456824716 456825554 0.000000e+00 1262.0
28 TraesCS3B01G492800 chr6D 97.619 42 1 0 3893 3934 456825678 456825719 5.590000e-09 73.1
29 TraesCS3B01G492800 chr1D 91.883 924 36 8 2982 3888 482243861 482244762 0.000000e+00 1254.0
30 TraesCS3B01G492800 chr1D 96.040 101 4 0 3931 4031 482244844 482244944 8.960000e-37 165.0
31 TraesCS3B01G492800 chr1D 97.778 45 1 0 3890 3934 482244883 482244927 1.200000e-10 78.7
32 TraesCS3B01G492800 chr3D 80.325 1601 240 52 1284 2830 555314534 555312955 0.000000e+00 1142.0
33 TraesCS3B01G492800 chr3D 82.357 1349 186 34 1284 2585 559120166 559121509 0.000000e+00 1125.0
34 TraesCS3B01G492800 chr3D 80.758 1398 204 41 1290 2631 555306154 555304766 0.000000e+00 1031.0
35 TraesCS3B01G492800 chr3D 80.127 1414 224 34 1208 2585 555144765 555143373 0.000000e+00 1002.0
36 TraesCS3B01G492800 chr3D 90.758 660 41 5 175 814 555333570 555332911 0.000000e+00 863.0
37 TraesCS3B01G492800 chr3D 93.144 423 24 2 1114 1536 555315331 555314914 2.060000e-172 616.0
38 TraesCS3B01G492800 chr3D 80.156 257 25 13 28 259 555429004 555428749 6.930000e-38 169.0
39 TraesCS3B01G492800 chr5B 92.408 382 21 6 2980 3354 211017737 211018117 4.580000e-149 538.0
40 TraesCS3B01G492800 chr5B 93.296 358 19 4 3405 3758 211019857 211020213 1.280000e-144 523.0
41 TraesCS3B01G492800 chr5B 80.228 263 42 6 323 575 610294308 610294046 5.320000e-44 189.0
42 TraesCS3B01G492800 chr1A 92.025 326 21 4 3405 3726 301862483 301862159 1.710000e-123 453.0
43 TraesCS3B01G492800 chr1A 89.286 168 17 1 3722 3888 301861404 301861237 4.080000e-50 209.0
44 TraesCS3B01G492800 chr1A 93.182 44 3 0 3891 3934 301861113 301861070 9.350000e-07 65.8
45 TraesCS3B01G492800 chr2A 85.480 427 54 3 259 677 245823502 245823076 4.780000e-119 438.0
46 TraesCS3B01G492800 chr1B 83.750 480 59 16 3418 3880 415214049 415214526 1.720000e-118 436.0
47 TraesCS3B01G492800 chr1B 87.446 231 23 5 2991 3215 598199222 598199452 1.110000e-65 261.0
48 TraesCS3B01G492800 chr5D 92.105 190 14 1 3700 3888 296365573 296365762 2.390000e-67 267.0
49 TraesCS3B01G492800 chr5D 79.554 269 38 9 323 575 494182261 494181994 4.140000e-40 176.0
50 TraesCS3B01G492800 chr5D 94.949 99 5 0 3931 4029 296365844 296365942 5.390000e-34 156.0
51 TraesCS3B01G492800 chr5D 94.000 100 6 0 3931 4030 296365955 296366054 6.980000e-33 152.0
52 TraesCS3B01G492800 chr5D 97.727 44 1 0 3891 3934 296365995 296366038 4.320000e-10 76.8
53 TraesCS3B01G492800 chr5D 95.455 44 2 0 3891 3934 296365884 296365927 2.010000e-08 71.3
54 TraesCS3B01G492800 chr4A 86.139 202 16 4 742 937 12378086 12378281 1.470000e-49 207.0
55 TraesCS3B01G492800 chr5A 84.314 153 17 4 323 468 617174431 617174279 4.200000e-30 143.0
56 TraesCS3B01G492800 chr6A 91.228 57 5 0 939 995 173189478 173189534 1.200000e-10 78.7
57 TraesCS3B01G492800 chr4D 100.000 36 0 0 3996 4031 309654904 309654869 2.600000e-07 67.6
58 TraesCS3B01G492800 chr2D 90.909 44 4 0 3891 3934 31747743 31747700 4.350000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G492800 chr3B 738623129 738627159 4030 True 7444.000000 7444 100.000000 1 4031 1 chr3B.!!$R4 4030
1 TraesCS3B01G492800 chr3B 742109083 742110415 1332 True 1120.000000 1120 82.379000 1284 2585 1 chr3B.!!$R7 1301
2 TraesCS3B01G492800 chr3B 738590536 738591835 1299 True 1083.000000 1083 82.005000 1284 2578 1 chr3B.!!$R3 1294
3 TraesCS3B01G492800 chr3B 741966809 741968105 1296 True 996.000000 996 81.146000 1297 2578 1 chr3B.!!$R5 1281
4 TraesCS3B01G492800 chr3B 738155106 738156608 1502 True 992.000000 992 79.161000 1208 2686 1 chr3B.!!$R1 1478
5 TraesCS3B01G492800 chr3B 738288494 738289820 1326 True 904.000000 904 79.750000 1290 2591 1 chr3B.!!$R2 1301
6 TraesCS3B01G492800 chr3A 692493716 692499091 5375 True 1132.333333 2944 89.317333 56 2991 3 chr3A.!!$R6 2935
7 TraesCS3B01G492800 chr3A 695515187 695516516 1329 False 1118.000000 1118 82.353000 1284 2585 1 chr3A.!!$F1 1301
8 TraesCS3B01G492800 chr3A 692314921 692316285 1364 True 1075.000000 1075 81.390000 1290 2631 1 chr3A.!!$R5 1341
9 TraesCS3B01G492800 chr3A 691981610 691982255 645 True 928.000000 928 92.661000 1957 2603 1 chr3A.!!$R2 646
10 TraesCS3B01G492800 chr3A 692056610 692057983 1373 True 896.000000 896 79.214000 1290 2631 1 chr3A.!!$R4 1341
11 TraesCS3B01G492800 chr3A 691991902 691992449 547 True 708.000000 708 90.328000 1299 1835 1 chr3A.!!$R3 536
12 TraesCS3B01G492800 chr6B 633011648 633012744 1096 True 493.600000 1267 92.723000 2987 4031 3 chr6B.!!$R1 1044
13 TraesCS3B01G492800 chr6B 633043858 633044959 1101 False 491.266667 1260 92.657000 2982 4031 3 chr6B.!!$F1 1049
14 TraesCS3B01G492800 chr6B 709522440 709523537 1097 False 489.266667 1254 92.648333 2985 4031 3 chr6B.!!$F2 1046
15 TraesCS3B01G492800 chr6D 456824716 456825719 1003 False 667.550000 1262 95.893000 3068 3934 2 chr6D.!!$F1 866
16 TraesCS3B01G492800 chr1D 482243861 482244944 1083 False 499.233333 1254 95.233667 2982 4031 3 chr1D.!!$F1 1049
17 TraesCS3B01G492800 chr3D 559120166 559121509 1343 False 1125.000000 1125 82.357000 1284 2585 1 chr3D.!!$F1 1301
18 TraesCS3B01G492800 chr3D 555304766 555306154 1388 True 1031.000000 1031 80.758000 1290 2631 1 chr3D.!!$R2 1341
19 TraesCS3B01G492800 chr3D 555143373 555144765 1392 True 1002.000000 1002 80.127000 1208 2585 1 chr3D.!!$R1 1377
20 TraesCS3B01G492800 chr3D 555312955 555315331 2376 True 879.000000 1142 86.734500 1114 2830 2 chr3D.!!$R5 1716
21 TraesCS3B01G492800 chr3D 555332911 555333570 659 True 863.000000 863 90.758000 175 814 1 chr3D.!!$R3 639
22 TraesCS3B01G492800 chr5B 211017737 211020213 2476 False 530.500000 538 92.852000 2980 3758 2 chr5B.!!$F1 778
23 TraesCS3B01G492800 chr1A 301861070 301862483 1413 True 242.600000 453 91.497667 3405 3934 3 chr1A.!!$R1 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
568 2306 0.038801 GGCAAACTCAAGCTCCAAGC 60.039 55.000 0.00 0.00 42.84 4.01 F
584 2322 0.331616 AAGCAAATTACTCCCGGGCT 59.668 50.000 18.49 5.53 0.00 5.19 F
724 2462 0.390603 CGTCCGGTGCTGGAACATAA 60.391 55.000 0.00 0.00 40.44 1.90 F
2362 6048 1.134946 GCACCCAGAACACAATATGGC 59.865 52.381 0.00 0.00 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2384 6070 0.955919 CAAGCTCTTGGAACCCCGAC 60.956 60.000 1.79 0.0 36.95 4.79 R
2472 6167 2.561478 TATGAAAGATAAGCCCGCCC 57.439 50.000 0.00 0.0 0.00 6.13 R
2612 6309 3.763057 ACAAAGGTCTACCCAAATCACC 58.237 45.455 0.00 0.0 36.42 4.02 R
3236 6967 1.271379 CCAAAGGAAGGGAGCGAAGAA 60.271 52.381 0.00 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.363990 CAGAGCGCGTGAGTGGGT 62.364 66.667 8.43 0.00 43.14 4.51
40 41 4.363990 AGAGCGCGTGAGTGGGTG 62.364 66.667 8.43 0.00 43.14 4.61
43 44 4.980805 GCGCGTGAGTGGGTGGAA 62.981 66.667 8.43 0.00 43.14 3.53
44 45 2.280524 CGCGTGAGTGGGTGGAAA 60.281 61.111 0.00 0.00 38.12 3.13
45 46 2.604174 CGCGTGAGTGGGTGGAAAC 61.604 63.158 0.00 0.00 38.12 2.78
46 47 2.604174 GCGTGAGTGGGTGGAAACG 61.604 63.158 0.00 0.00 0.00 3.60
47 48 1.227438 CGTGAGTGGGTGGAAACGT 60.227 57.895 0.00 0.00 0.00 3.99
48 49 1.495584 CGTGAGTGGGTGGAAACGTG 61.496 60.000 0.00 0.00 0.00 4.49
49 50 0.179067 GTGAGTGGGTGGAAACGTGA 60.179 55.000 0.00 0.00 0.00 4.35
50 51 0.105964 TGAGTGGGTGGAAACGTGAG 59.894 55.000 0.00 0.00 0.00 3.51
79 80 3.570212 GGCATGGCTCCGGGGTAT 61.570 66.667 12.86 0.00 0.00 2.73
89 90 2.047830 CTCCGGGGTATAAAGCCTCTT 58.952 52.381 0.00 0.00 43.23 2.85
91 92 2.047830 CCGGGGTATAAAGCCTCTTCT 58.952 52.381 0.00 0.00 43.23 2.85
108 109 1.803334 TCTGTGTCCGTTGTAATGGC 58.197 50.000 0.00 0.00 34.98 4.40
109 110 1.346395 TCTGTGTCCGTTGTAATGGCT 59.654 47.619 0.00 0.00 34.98 4.75
113 114 0.802494 GTCCGTTGTAATGGCTGTGG 59.198 55.000 0.00 0.00 34.98 4.17
114 115 0.322098 TCCGTTGTAATGGCTGTGGG 60.322 55.000 0.00 0.00 34.98 4.61
128 129 0.395586 TGTGGGCTGAGTTTGTGCTT 60.396 50.000 0.00 0.00 0.00 3.91
137 138 5.348164 GCTGAGTTTGTGCTTAAAGGAAAA 58.652 37.500 0.00 0.00 0.00 2.29
139 140 6.479990 GCTGAGTTTGTGCTTAAAGGAAAATT 59.520 34.615 0.00 0.00 0.00 1.82
140 141 7.517259 GCTGAGTTTGTGCTTAAAGGAAAATTG 60.517 37.037 0.00 0.00 0.00 2.32
141 142 6.257630 TGAGTTTGTGCTTAAAGGAAAATTGC 59.742 34.615 0.00 0.00 0.00 3.56
142 143 5.527214 AGTTTGTGCTTAAAGGAAAATTGCC 59.473 36.000 0.00 0.00 0.00 4.52
143 144 3.648009 TGTGCTTAAAGGAAAATTGCCG 58.352 40.909 0.00 0.00 0.00 5.69
159 174 1.577421 CCGTTCGTCGCCCAAAAAT 59.423 52.632 0.00 0.00 38.35 1.82
163 178 2.350498 CGTTCGTCGCCCAAAAATATCT 59.650 45.455 0.00 0.00 0.00 1.98
180 1173 7.510675 AAATATCTTGTGTCCCTCCTTTCTA 57.489 36.000 0.00 0.00 0.00 2.10
195 1188 4.761739 TCCTTTCTACTTTCTCGGTTCGTA 59.238 41.667 0.00 0.00 0.00 3.43
207 1200 1.446907 GGTTCGTACCAGAGAGACGA 58.553 55.000 6.31 0.00 44.36 4.20
210 1203 0.244721 TCGTACCAGAGAGACGACGA 59.755 55.000 0.00 0.00 40.45 4.20
227 1960 1.134220 ACGAGAGAGAGGGTGAGCTAG 60.134 57.143 0.00 0.00 0.00 3.42
307 2044 4.459089 GCAGGCGTGGGAGAGGAC 62.459 72.222 8.72 0.00 0.00 3.85
317 2054 3.827898 GAGAGGACAGGCGACCGG 61.828 72.222 0.00 0.00 31.56 5.28
319 2056 3.827898 GAGGACAGGCGACCGGAG 61.828 72.222 9.46 2.13 31.56 4.63
357 2095 2.187946 GTGCCTCATCCTCACCGG 59.812 66.667 0.00 0.00 0.00 5.28
374 2112 4.065110 GCAACGTGCCCTTTCTCT 57.935 55.556 0.00 0.00 37.42 3.10
376 2114 0.238553 GCAACGTGCCCTTTCTCTTC 59.761 55.000 0.00 0.00 37.42 2.87
378 2116 0.250770 AACGTGCCCTTTCTCTTCCC 60.251 55.000 0.00 0.00 0.00 3.97
379 2117 1.377333 CGTGCCCTTTCTCTTCCCC 60.377 63.158 0.00 0.00 0.00 4.81
383 2121 0.625849 GCCCTTTCTCTTCCCCATCA 59.374 55.000 0.00 0.00 0.00 3.07
387 2125 0.253044 TTTCTCTTCCCCATCAGCCG 59.747 55.000 0.00 0.00 0.00 5.52
390 2128 2.825836 CTTCCCCATCAGCCGCAC 60.826 66.667 0.00 0.00 0.00 5.34
394 2132 4.864334 CCCATCAGCCGCACCCTC 62.864 72.222 0.00 0.00 0.00 4.30
402 2140 4.899239 CCGCACCCTCGCCATCTC 62.899 72.222 0.00 0.00 0.00 2.75
403 2141 4.899239 CGCACCCTCGCCATCTCC 62.899 72.222 0.00 0.00 0.00 3.71
404 2142 3.474570 GCACCCTCGCCATCTCCT 61.475 66.667 0.00 0.00 0.00 3.69
405 2143 2.134287 GCACCCTCGCCATCTCCTA 61.134 63.158 0.00 0.00 0.00 2.94
406 2144 2.045280 CACCCTCGCCATCTCCTAG 58.955 63.158 0.00 0.00 0.00 3.02
407 2145 1.152440 ACCCTCGCCATCTCCTAGG 60.152 63.158 0.82 0.82 0.00 3.02
408 2146 1.152440 CCCTCGCCATCTCCTAGGT 60.152 63.158 9.08 0.00 0.00 3.08
409 2147 1.182385 CCCTCGCCATCTCCTAGGTC 61.182 65.000 9.08 0.00 0.00 3.85
410 2148 0.178975 CCTCGCCATCTCCTAGGTCT 60.179 60.000 9.08 0.00 0.00 3.85
411 2149 0.958091 CTCGCCATCTCCTAGGTCTG 59.042 60.000 9.08 4.94 0.00 3.51
412 2150 1.109920 TCGCCATCTCCTAGGTCTGC 61.110 60.000 9.08 5.18 0.00 4.26
413 2151 1.395045 CGCCATCTCCTAGGTCTGCA 61.395 60.000 9.08 0.00 0.00 4.41
414 2152 0.833287 GCCATCTCCTAGGTCTGCAA 59.167 55.000 9.08 0.00 0.00 4.08
415 2153 1.202627 GCCATCTCCTAGGTCTGCAAG 60.203 57.143 9.08 0.00 0.00 4.01
416 2154 2.114616 CCATCTCCTAGGTCTGCAAGT 58.885 52.381 9.08 0.00 33.76 3.16
417 2155 2.102252 CCATCTCCTAGGTCTGCAAGTC 59.898 54.545 9.08 0.00 33.76 3.01
418 2156 1.853963 TCTCCTAGGTCTGCAAGTCC 58.146 55.000 9.08 0.00 42.88 3.85
419 2157 0.827368 CTCCTAGGTCTGCAAGTCCC 59.173 60.000 9.08 0.00 43.64 4.46
420 2158 0.413832 TCCTAGGTCTGCAAGTCCCT 59.586 55.000 9.08 0.00 43.64 4.20
421 2159 0.827368 CCTAGGTCTGCAAGTCCCTC 59.173 60.000 0.00 0.00 43.64 4.30
422 2160 1.621072 CCTAGGTCTGCAAGTCCCTCT 60.621 57.143 0.00 0.00 43.64 3.69
423 2161 1.754226 CTAGGTCTGCAAGTCCCTCTC 59.246 57.143 0.00 0.00 43.64 3.20
424 2162 0.907230 AGGTCTGCAAGTCCCTCTCC 60.907 60.000 0.00 0.00 43.64 3.71
425 2163 1.216710 GTCTGCAAGTCCCTCTCCG 59.783 63.158 0.00 0.00 33.76 4.63
426 2164 1.228894 TCTGCAAGTCCCTCTCCGT 60.229 57.895 0.00 0.00 33.76 4.69
427 2165 1.216710 CTGCAAGTCCCTCTCCGTC 59.783 63.158 0.00 0.00 0.00 4.79
428 2166 2.232298 CTGCAAGTCCCTCTCCGTCC 62.232 65.000 0.00 0.00 0.00 4.79
429 2167 1.985116 GCAAGTCCCTCTCCGTCCT 60.985 63.158 0.00 0.00 0.00 3.85
430 2168 1.893786 CAAGTCCCTCTCCGTCCTG 59.106 63.158 0.00 0.00 0.00 3.86
431 2169 1.985116 AAGTCCCTCTCCGTCCTGC 60.985 63.158 0.00 0.00 0.00 4.85
432 2170 2.363147 GTCCCTCTCCGTCCTGCT 60.363 66.667 0.00 0.00 0.00 4.24
433 2171 2.043852 TCCCTCTCCGTCCTGCTC 60.044 66.667 0.00 0.00 0.00 4.26
434 2172 3.522731 CCCTCTCCGTCCTGCTCG 61.523 72.222 0.00 0.00 0.00 5.03
435 2173 2.752238 CCTCTCCGTCCTGCTCGT 60.752 66.667 0.00 0.00 0.00 4.18
436 2174 2.487428 CTCTCCGTCCTGCTCGTG 59.513 66.667 0.00 0.00 0.00 4.35
437 2175 2.282251 TCTCCGTCCTGCTCGTGT 60.282 61.111 0.00 0.00 0.00 4.49
438 2176 2.126307 CTCCGTCCTGCTCGTGTG 60.126 66.667 0.00 0.00 0.00 3.82
439 2177 4.357947 TCCGTCCTGCTCGTGTGC 62.358 66.667 0.00 0.00 0.00 4.57
440 2178 4.662961 CCGTCCTGCTCGTGTGCA 62.663 66.667 0.00 0.00 41.05 4.57
446 2184 4.314440 TGCTCGTGTGCAGGGGTC 62.314 66.667 0.00 0.00 38.12 4.46
448 2186 4.742201 CTCGTGTGCAGGGGTCCG 62.742 72.222 0.00 0.00 0.00 4.79
450 2188 4.619227 CGTGTGCAGGGGTCCGTT 62.619 66.667 0.00 0.00 0.00 4.44
451 2189 2.203294 GTGTGCAGGGGTCCGTTT 60.203 61.111 0.00 0.00 0.00 3.60
452 2190 2.112297 TGTGCAGGGGTCCGTTTC 59.888 61.111 0.00 0.00 0.00 2.78
453 2191 2.671963 GTGCAGGGGTCCGTTTCC 60.672 66.667 0.00 0.00 0.00 3.13
454 2192 3.172106 TGCAGGGGTCCGTTTCCA 61.172 61.111 0.00 0.00 0.00 3.53
455 2193 2.671963 GCAGGGGTCCGTTTCCAC 60.672 66.667 0.00 0.00 0.00 4.02
456 2194 3.157680 CAGGGGTCCGTTTCCACT 58.842 61.111 0.00 0.00 39.58 4.00
457 2195 1.454539 CAGGGGTCCGTTTCCACTT 59.545 57.895 0.00 0.00 36.45 3.16
458 2196 0.688487 CAGGGGTCCGTTTCCACTTA 59.312 55.000 0.00 0.00 36.45 2.24
459 2197 0.689055 AGGGGTCCGTTTCCACTTAC 59.311 55.000 0.00 0.00 34.74 2.34
460 2198 0.397564 GGGGTCCGTTTCCACTTACA 59.602 55.000 0.00 0.00 0.00 2.41
461 2199 1.003928 GGGGTCCGTTTCCACTTACAT 59.996 52.381 0.00 0.00 0.00 2.29
462 2200 2.353323 GGGTCCGTTTCCACTTACATC 58.647 52.381 0.00 0.00 0.00 3.06
463 2201 2.289819 GGGTCCGTTTCCACTTACATCA 60.290 50.000 0.00 0.00 0.00 3.07
464 2202 3.404899 GGTCCGTTTCCACTTACATCAA 58.595 45.455 0.00 0.00 0.00 2.57
465 2203 4.007659 GGTCCGTTTCCACTTACATCAAT 58.992 43.478 0.00 0.00 0.00 2.57
466 2204 4.457949 GGTCCGTTTCCACTTACATCAATT 59.542 41.667 0.00 0.00 0.00 2.32
467 2205 5.048294 GGTCCGTTTCCACTTACATCAATTT 60.048 40.000 0.00 0.00 0.00 1.82
468 2206 6.084277 GTCCGTTTCCACTTACATCAATTTC 58.916 40.000 0.00 0.00 0.00 2.17
469 2207 5.182380 TCCGTTTCCACTTACATCAATTTCC 59.818 40.000 0.00 0.00 0.00 3.13
470 2208 5.183140 CCGTTTCCACTTACATCAATTTCCT 59.817 40.000 0.00 0.00 0.00 3.36
471 2209 6.373216 CCGTTTCCACTTACATCAATTTCCTA 59.627 38.462 0.00 0.00 0.00 2.94
472 2210 7.067008 CCGTTTCCACTTACATCAATTTCCTAT 59.933 37.037 0.00 0.00 0.00 2.57
473 2211 8.122952 CGTTTCCACTTACATCAATTTCCTATC 58.877 37.037 0.00 0.00 0.00 2.08
474 2212 8.956426 GTTTCCACTTACATCAATTTCCTATCA 58.044 33.333 0.00 0.00 0.00 2.15
475 2213 8.737168 TTCCACTTACATCAATTTCCTATCAG 57.263 34.615 0.00 0.00 0.00 2.90
476 2214 7.282585 TCCACTTACATCAATTTCCTATCAGG 58.717 38.462 0.00 0.00 36.46 3.86
477 2215 6.488006 CCACTTACATCAATTTCCTATCAGGG 59.512 42.308 0.00 0.00 35.59 4.45
478 2216 7.282585 CACTTACATCAATTTCCTATCAGGGA 58.717 38.462 0.00 0.00 35.59 4.20
479 2217 7.775093 CACTTACATCAATTTCCTATCAGGGAA 59.225 37.037 0.00 0.00 42.86 3.97
480 2218 7.775561 ACTTACATCAATTTCCTATCAGGGAAC 59.224 37.037 0.00 0.00 44.05 3.62
495 2233 2.474410 GGAACCAACTGAACTCCGAT 57.526 50.000 0.00 0.00 0.00 4.18
496 2234 2.779506 GGAACCAACTGAACTCCGATT 58.220 47.619 0.00 0.00 0.00 3.34
497 2235 3.934068 GGAACCAACTGAACTCCGATTA 58.066 45.455 0.00 0.00 0.00 1.75
498 2236 4.320870 GGAACCAACTGAACTCCGATTAA 58.679 43.478 0.00 0.00 0.00 1.40
499 2237 4.153655 GGAACCAACTGAACTCCGATTAAC 59.846 45.833 0.00 0.00 0.00 2.01
500 2238 3.671716 ACCAACTGAACTCCGATTAACC 58.328 45.455 0.00 0.00 0.00 2.85
501 2239 3.071892 ACCAACTGAACTCCGATTAACCA 59.928 43.478 0.00 0.00 0.00 3.67
502 2240 4.069304 CCAACTGAACTCCGATTAACCAA 58.931 43.478 0.00 0.00 0.00 3.67
503 2241 4.517453 CCAACTGAACTCCGATTAACCAAA 59.483 41.667 0.00 0.00 0.00 3.28
504 2242 5.449304 CAACTGAACTCCGATTAACCAAAC 58.551 41.667 0.00 0.00 0.00 2.93
505 2243 4.710324 ACTGAACTCCGATTAACCAAACA 58.290 39.130 0.00 0.00 0.00 2.83
506 2244 5.127491 ACTGAACTCCGATTAACCAAACAA 58.873 37.500 0.00 0.00 0.00 2.83
507 2245 5.238650 ACTGAACTCCGATTAACCAAACAAG 59.761 40.000 0.00 0.00 0.00 3.16
508 2246 5.127491 TGAACTCCGATTAACCAAACAAGT 58.873 37.500 0.00 0.00 0.00 3.16
509 2247 5.591067 TGAACTCCGATTAACCAAACAAGTT 59.409 36.000 0.00 0.00 0.00 2.66
510 2248 5.684550 ACTCCGATTAACCAAACAAGTTC 57.315 39.130 0.00 0.00 0.00 3.01
511 2249 5.374071 ACTCCGATTAACCAAACAAGTTCT 58.626 37.500 0.00 0.00 0.00 3.01
512 2250 5.826208 ACTCCGATTAACCAAACAAGTTCTT 59.174 36.000 0.00 0.00 0.00 2.52
513 2251 6.067263 TCCGATTAACCAAACAAGTTCTTG 57.933 37.500 10.50 10.50 0.00 3.02
514 2252 5.591067 TCCGATTAACCAAACAAGTTCTTGT 59.409 36.000 11.75 11.75 36.59 3.16
515 2253 6.095720 TCCGATTAACCAAACAAGTTCTTGTT 59.904 34.615 20.68 20.68 46.12 2.83
516 2254 6.416750 CCGATTAACCAAACAAGTTCTTGTTC 59.583 38.462 24.64 12.89 43.66 3.18
517 2255 6.140108 CGATTAACCAAACAAGTTCTTGTTCG 59.860 38.462 24.64 20.21 43.66 3.95
518 2256 4.776795 AACCAAACAAGTTCTTGTTCGT 57.223 36.364 24.64 20.68 43.66 3.85
519 2257 4.351131 ACCAAACAAGTTCTTGTTCGTC 57.649 40.909 24.64 0.00 43.66 4.20
520 2258 3.128068 ACCAAACAAGTTCTTGTTCGTCC 59.872 43.478 24.64 0.00 43.66 4.79
521 2259 3.488553 CCAAACAAGTTCTTGTTCGTCCC 60.489 47.826 24.64 0.00 43.66 4.46
522 2260 2.702592 ACAAGTTCTTGTTCGTCCCA 57.297 45.000 11.75 0.00 0.00 4.37
523 2261 3.208747 ACAAGTTCTTGTTCGTCCCAT 57.791 42.857 11.75 0.00 0.00 4.00
524 2262 3.551846 ACAAGTTCTTGTTCGTCCCATT 58.448 40.909 11.75 0.00 0.00 3.16
525 2263 4.710324 ACAAGTTCTTGTTCGTCCCATTA 58.290 39.130 11.75 0.00 0.00 1.90
526 2264 5.313712 ACAAGTTCTTGTTCGTCCCATTAT 58.686 37.500 11.75 0.00 0.00 1.28
527 2265 5.768164 ACAAGTTCTTGTTCGTCCCATTATT 59.232 36.000 11.75 0.00 0.00 1.40
528 2266 6.264518 ACAAGTTCTTGTTCGTCCCATTATTT 59.735 34.615 11.75 0.00 0.00 1.40
529 2267 6.254281 AGTTCTTGTTCGTCCCATTATTTG 57.746 37.500 0.00 0.00 0.00 2.32
530 2268 5.768164 AGTTCTTGTTCGTCCCATTATTTGT 59.232 36.000 0.00 0.00 0.00 2.83
531 2269 5.621197 TCTTGTTCGTCCCATTATTTGTG 57.379 39.130 0.00 0.00 0.00 3.33
532 2270 5.309638 TCTTGTTCGTCCCATTATTTGTGA 58.690 37.500 0.00 0.00 0.00 3.58
533 2271 5.943416 TCTTGTTCGTCCCATTATTTGTGAT 59.057 36.000 0.00 0.00 0.00 3.06
534 2272 6.432783 TCTTGTTCGTCCCATTATTTGTGATT 59.567 34.615 0.00 0.00 0.00 2.57
535 2273 6.582677 TGTTCGTCCCATTATTTGTGATTT 57.417 33.333 0.00 0.00 0.00 2.17
536 2274 6.385843 TGTTCGTCCCATTATTTGTGATTTG 58.614 36.000 0.00 0.00 0.00 2.32
537 2275 4.992688 TCGTCCCATTATTTGTGATTTGC 58.007 39.130 0.00 0.00 0.00 3.68
538 2276 4.460731 TCGTCCCATTATTTGTGATTTGCA 59.539 37.500 0.00 0.00 0.00 4.08
539 2277 4.799949 CGTCCCATTATTTGTGATTTGCAG 59.200 41.667 0.00 0.00 0.00 4.41
540 2278 5.392919 CGTCCCATTATTTGTGATTTGCAGA 60.393 40.000 0.00 0.00 0.00 4.26
541 2279 6.576185 GTCCCATTATTTGTGATTTGCAGAT 58.424 36.000 0.00 0.00 0.00 2.90
542 2280 7.468494 CGTCCCATTATTTGTGATTTGCAGATA 60.468 37.037 0.00 0.00 0.00 1.98
543 2281 8.362639 GTCCCATTATTTGTGATTTGCAGATAT 58.637 33.333 0.00 0.00 0.00 1.63
544 2282 9.585369 TCCCATTATTTGTGATTTGCAGATATA 57.415 29.630 0.00 0.00 0.00 0.86
545 2283 9.850628 CCCATTATTTGTGATTTGCAGATATAG 57.149 33.333 0.00 0.00 0.00 1.31
546 2284 9.350357 CCATTATTTGTGATTTGCAGATATAGC 57.650 33.333 0.00 0.00 0.00 2.97
550 2288 7.734924 TTTGTGATTTGCAGATATAGCTAGG 57.265 36.000 0.00 0.00 0.00 3.02
551 2289 5.240891 TGTGATTTGCAGATATAGCTAGGC 58.759 41.667 0.00 0.00 0.00 3.93
552 2290 5.221702 TGTGATTTGCAGATATAGCTAGGCA 60.222 40.000 0.00 0.00 0.00 4.75
553 2291 5.702670 GTGATTTGCAGATATAGCTAGGCAA 59.297 40.000 10.67 10.67 39.24 4.52
556 2294 4.963318 TGCAGATATAGCTAGGCAAACT 57.037 40.909 0.00 0.00 0.00 2.66
557 2295 4.887748 TGCAGATATAGCTAGGCAAACTC 58.112 43.478 0.00 0.00 0.00 3.01
558 2296 4.344968 TGCAGATATAGCTAGGCAAACTCA 59.655 41.667 0.00 0.00 0.00 3.41
559 2297 5.163311 TGCAGATATAGCTAGGCAAACTCAA 60.163 40.000 0.00 0.00 0.00 3.02
560 2298 5.407995 GCAGATATAGCTAGGCAAACTCAAG 59.592 44.000 0.00 0.00 0.00 3.02
561 2299 5.407995 CAGATATAGCTAGGCAAACTCAAGC 59.592 44.000 0.00 0.00 0.00 4.01
562 2300 3.922171 ATAGCTAGGCAAACTCAAGCT 57.078 42.857 0.00 0.42 45.14 3.74
563 2301 2.106477 AGCTAGGCAAACTCAAGCTC 57.894 50.000 0.00 0.00 39.23 4.09
564 2302 1.090728 GCTAGGCAAACTCAAGCTCC 58.909 55.000 0.00 0.00 0.00 4.70
565 2303 1.611673 GCTAGGCAAACTCAAGCTCCA 60.612 52.381 0.00 0.00 0.00 3.86
566 2304 2.783135 CTAGGCAAACTCAAGCTCCAA 58.217 47.619 0.00 0.00 0.00 3.53
567 2305 1.613836 AGGCAAACTCAAGCTCCAAG 58.386 50.000 0.00 0.00 0.00 3.61
568 2306 0.038801 GGCAAACTCAAGCTCCAAGC 60.039 55.000 0.00 0.00 42.84 4.01
569 2307 0.670162 GCAAACTCAAGCTCCAAGCA 59.330 50.000 1.29 0.00 45.56 3.91
570 2308 1.067516 GCAAACTCAAGCTCCAAGCAA 59.932 47.619 1.29 0.00 45.56 3.91
571 2309 2.481795 GCAAACTCAAGCTCCAAGCAAA 60.482 45.455 1.29 0.00 45.56 3.68
572 2310 3.801293 GCAAACTCAAGCTCCAAGCAAAT 60.801 43.478 1.29 0.00 45.56 2.32
573 2311 4.374399 CAAACTCAAGCTCCAAGCAAATT 58.626 39.130 1.29 0.00 45.56 1.82
574 2312 5.531634 CAAACTCAAGCTCCAAGCAAATTA 58.468 37.500 1.29 0.00 45.56 1.40
575 2313 4.773323 ACTCAAGCTCCAAGCAAATTAC 57.227 40.909 1.29 0.00 45.56 1.89
576 2314 4.401925 ACTCAAGCTCCAAGCAAATTACT 58.598 39.130 1.29 0.00 45.56 2.24
577 2315 4.457257 ACTCAAGCTCCAAGCAAATTACTC 59.543 41.667 1.29 0.00 45.56 2.59
578 2316 3.758554 TCAAGCTCCAAGCAAATTACTCC 59.241 43.478 1.29 0.00 45.56 3.85
579 2317 2.728007 AGCTCCAAGCAAATTACTCCC 58.272 47.619 1.29 0.00 45.56 4.30
580 2318 1.401905 GCTCCAAGCAAATTACTCCCG 59.598 52.381 0.00 0.00 41.89 5.14
581 2319 2.017049 CTCCAAGCAAATTACTCCCGG 58.983 52.381 0.00 0.00 0.00 5.73
582 2320 1.102978 CCAAGCAAATTACTCCCGGG 58.897 55.000 16.85 16.85 0.00 5.73
583 2321 0.455815 CAAGCAAATTACTCCCGGGC 59.544 55.000 18.49 0.00 0.00 6.13
584 2322 0.331616 AAGCAAATTACTCCCGGGCT 59.668 50.000 18.49 5.53 0.00 5.19
585 2323 0.394352 AGCAAATTACTCCCGGGCTG 60.394 55.000 18.49 14.05 0.00 4.85
586 2324 2.004808 GCAAATTACTCCCGGGCTGC 62.005 60.000 18.49 11.42 0.00 5.25
587 2325 1.076995 AAATTACTCCCGGGCTGCC 60.077 57.895 18.49 11.05 0.00 4.85
588 2326 2.567664 AAATTACTCCCGGGCTGCCC 62.568 60.000 28.17 28.17 41.09 5.36
600 2338 2.435938 CTGCCCCGTGTGCGTAAT 60.436 61.111 0.00 0.00 36.15 1.89
601 2339 2.032834 TGCCCCGTGTGCGTAATT 59.967 55.556 0.00 0.00 36.15 1.40
602 2340 1.977594 CTGCCCCGTGTGCGTAATTC 61.978 60.000 0.00 0.00 36.15 2.17
603 2341 1.743995 GCCCCGTGTGCGTAATTCT 60.744 57.895 0.00 0.00 36.15 2.40
604 2342 1.303091 GCCCCGTGTGCGTAATTCTT 61.303 55.000 0.00 0.00 36.15 2.52
605 2343 0.725117 CCCCGTGTGCGTAATTCTTC 59.275 55.000 0.00 0.00 36.15 2.87
606 2344 1.674817 CCCCGTGTGCGTAATTCTTCT 60.675 52.381 0.00 0.00 36.15 2.85
607 2345 2.073816 CCCGTGTGCGTAATTCTTCTT 58.926 47.619 0.00 0.00 36.15 2.52
608 2346 2.159707 CCCGTGTGCGTAATTCTTCTTG 60.160 50.000 0.00 0.00 36.15 3.02
609 2347 2.495939 CGTGTGCGTAATTCTTCTTGC 58.504 47.619 0.00 0.00 0.00 4.01
610 2348 2.157668 CGTGTGCGTAATTCTTCTTGCT 59.842 45.455 0.00 0.00 0.00 3.91
611 2349 3.363970 CGTGTGCGTAATTCTTCTTGCTT 60.364 43.478 0.00 0.00 0.00 3.91
612 2350 4.143200 CGTGTGCGTAATTCTTCTTGCTTA 60.143 41.667 0.00 0.00 0.00 3.09
613 2351 5.613795 CGTGTGCGTAATTCTTCTTGCTTAA 60.614 40.000 0.00 0.00 0.00 1.85
614 2352 5.564127 GTGTGCGTAATTCTTCTTGCTTAAC 59.436 40.000 0.00 0.00 0.00 2.01
615 2353 5.086727 GTGCGTAATTCTTCTTGCTTAACC 58.913 41.667 0.00 0.00 0.00 2.85
616 2354 5.001232 TGCGTAATTCTTCTTGCTTAACCT 58.999 37.500 0.00 0.00 0.00 3.50
617 2355 5.106712 TGCGTAATTCTTCTTGCTTAACCTG 60.107 40.000 0.00 0.00 0.00 4.00
618 2356 5.106673 GCGTAATTCTTCTTGCTTAACCTGT 60.107 40.000 0.00 0.00 0.00 4.00
619 2357 6.534934 CGTAATTCTTCTTGCTTAACCTGTC 58.465 40.000 0.00 0.00 0.00 3.51
620 2358 6.147164 CGTAATTCTTCTTGCTTAACCTGTCA 59.853 38.462 0.00 0.00 0.00 3.58
621 2359 7.148407 CGTAATTCTTCTTGCTTAACCTGTCAT 60.148 37.037 0.00 0.00 0.00 3.06
622 2360 7.530426 AATTCTTCTTGCTTAACCTGTCATT 57.470 32.000 0.00 0.00 0.00 2.57
623 2361 5.947228 TCTTCTTGCTTAACCTGTCATTG 57.053 39.130 0.00 0.00 0.00 2.82
624 2362 4.216257 TCTTCTTGCTTAACCTGTCATTGC 59.784 41.667 0.00 0.00 0.00 3.56
625 2363 3.754965 TCTTGCTTAACCTGTCATTGCT 58.245 40.909 0.00 0.00 0.00 3.91
626 2364 4.905429 TCTTGCTTAACCTGTCATTGCTA 58.095 39.130 0.00 0.00 0.00 3.49
627 2365 5.500234 TCTTGCTTAACCTGTCATTGCTAT 58.500 37.500 0.00 0.00 0.00 2.97
628 2366 5.945784 TCTTGCTTAACCTGTCATTGCTATT 59.054 36.000 0.00 0.00 0.00 1.73
629 2367 5.565592 TGCTTAACCTGTCATTGCTATTG 57.434 39.130 0.00 0.00 0.00 1.90
630 2368 5.009631 TGCTTAACCTGTCATTGCTATTGT 58.990 37.500 0.00 0.00 0.00 2.71
631 2369 6.176896 TGCTTAACCTGTCATTGCTATTGTA 58.823 36.000 0.00 0.00 0.00 2.41
632 2370 6.093495 TGCTTAACCTGTCATTGCTATTGTAC 59.907 38.462 0.00 0.00 0.00 2.90
633 2371 6.093495 GCTTAACCTGTCATTGCTATTGTACA 59.907 38.462 0.00 0.00 0.00 2.90
634 2372 7.361713 GCTTAACCTGTCATTGCTATTGTACAA 60.362 37.037 11.41 11.41 0.00 2.41
635 2373 5.880054 ACCTGTCATTGCTATTGTACAAC 57.120 39.130 11.22 0.00 0.00 3.32
636 2374 5.560724 ACCTGTCATTGCTATTGTACAACT 58.439 37.500 11.22 3.26 0.00 3.16
637 2375 5.412594 ACCTGTCATTGCTATTGTACAACTG 59.587 40.000 11.22 7.82 0.00 3.16
638 2376 5.643348 CCTGTCATTGCTATTGTACAACTGA 59.357 40.000 11.22 4.83 0.00 3.41
639 2377 6.183360 CCTGTCATTGCTATTGTACAACTGAG 60.183 42.308 11.22 9.75 0.00 3.35
640 2378 6.230472 TGTCATTGCTATTGTACAACTGAGT 58.770 36.000 11.22 0.00 0.00 3.41
641 2379 6.147656 TGTCATTGCTATTGTACAACTGAGTG 59.852 38.462 11.22 6.43 0.00 3.51
642 2380 6.147821 GTCATTGCTATTGTACAACTGAGTGT 59.852 38.462 11.22 0.00 35.43 3.55
643 2381 7.330946 GTCATTGCTATTGTACAACTGAGTGTA 59.669 37.037 11.22 0.00 32.75 2.90
655 2393 5.696724 ACAACTGAGTGTACATTACTGAAGC 59.303 40.000 0.00 0.00 0.00 3.86
656 2394 5.730296 ACTGAGTGTACATTACTGAAGCT 57.270 39.130 0.00 0.00 0.00 3.74
657 2395 6.835819 ACTGAGTGTACATTACTGAAGCTA 57.164 37.500 0.00 0.00 0.00 3.32
658 2396 7.228314 ACTGAGTGTACATTACTGAAGCTAA 57.772 36.000 0.00 0.00 0.00 3.09
659 2397 7.841956 ACTGAGTGTACATTACTGAAGCTAAT 58.158 34.615 0.00 0.00 0.00 1.73
660 2398 7.976734 ACTGAGTGTACATTACTGAAGCTAATC 59.023 37.037 0.00 0.00 0.00 1.75
661 2399 6.972901 TGAGTGTACATTACTGAAGCTAATCG 59.027 38.462 0.00 0.00 0.00 3.34
662 2400 7.096884 AGTGTACATTACTGAAGCTAATCGA 57.903 36.000 0.00 0.00 0.00 3.59
663 2401 6.973474 AGTGTACATTACTGAAGCTAATCGAC 59.027 38.462 0.00 0.00 0.00 4.20
664 2402 6.750501 GTGTACATTACTGAAGCTAATCGACA 59.249 38.462 0.00 0.00 0.00 4.35
665 2403 6.750501 TGTACATTACTGAAGCTAATCGACAC 59.249 38.462 0.00 0.00 0.00 3.67
666 2404 5.967088 ACATTACTGAAGCTAATCGACACT 58.033 37.500 0.00 0.00 0.00 3.55
667 2405 5.807520 ACATTACTGAAGCTAATCGACACTG 59.192 40.000 0.00 0.00 0.00 3.66
668 2406 2.611518 ACTGAAGCTAATCGACACTGC 58.388 47.619 0.00 0.00 0.00 4.40
669 2407 2.029020 ACTGAAGCTAATCGACACTGCA 60.029 45.455 0.00 0.00 0.00 4.41
670 2408 2.337583 TGAAGCTAATCGACACTGCAC 58.662 47.619 0.00 0.00 0.00 4.57
671 2409 2.029020 TGAAGCTAATCGACACTGCACT 60.029 45.455 0.00 0.00 0.00 4.40
672 2410 3.192633 TGAAGCTAATCGACACTGCACTA 59.807 43.478 0.00 0.00 0.00 2.74
673 2411 4.142160 TGAAGCTAATCGACACTGCACTAT 60.142 41.667 0.00 0.00 0.00 2.12
674 2412 5.067283 TGAAGCTAATCGACACTGCACTATA 59.933 40.000 0.00 0.00 0.00 1.31
675 2413 5.515797 AGCTAATCGACACTGCACTATAA 57.484 39.130 0.00 0.00 0.00 0.98
676 2414 5.902681 AGCTAATCGACACTGCACTATAAA 58.097 37.500 0.00 0.00 0.00 1.40
677 2415 6.516718 AGCTAATCGACACTGCACTATAAAT 58.483 36.000 0.00 0.00 0.00 1.40
678 2416 6.422100 AGCTAATCGACACTGCACTATAAATG 59.578 38.462 0.00 0.00 0.00 2.32
679 2417 6.201044 GCTAATCGACACTGCACTATAAATGT 59.799 38.462 0.00 0.00 0.00 2.71
680 2418 7.381408 GCTAATCGACACTGCACTATAAATGTA 59.619 37.037 0.00 0.00 0.00 2.29
681 2419 9.244799 CTAATCGACACTGCACTATAAATGTAA 57.755 33.333 0.00 0.00 0.00 2.41
682 2420 8.487313 AATCGACACTGCACTATAAATGTAAA 57.513 30.769 0.00 0.00 0.00 2.01
683 2421 7.892778 TCGACACTGCACTATAAATGTAAAA 57.107 32.000 0.00 0.00 0.00 1.52
684 2422 8.312896 TCGACACTGCACTATAAATGTAAAAA 57.687 30.769 0.00 0.00 0.00 1.94
708 2446 9.716507 AAAATACAGTTAATATGATTGTGCGTC 57.283 29.630 0.00 0.00 0.00 5.19
709 2447 5.734855 ACAGTTAATATGATTGTGCGTCC 57.265 39.130 0.00 0.00 0.00 4.79
710 2448 4.270084 ACAGTTAATATGATTGTGCGTCCG 59.730 41.667 0.00 0.00 0.00 4.79
711 2449 3.807622 AGTTAATATGATTGTGCGTCCGG 59.192 43.478 0.00 0.00 0.00 5.14
712 2450 2.325583 AATATGATTGTGCGTCCGGT 57.674 45.000 0.00 0.00 0.00 5.28
713 2451 1.581934 ATATGATTGTGCGTCCGGTG 58.418 50.000 0.00 0.00 0.00 4.94
714 2452 1.087202 TATGATTGTGCGTCCGGTGC 61.087 55.000 13.43 13.43 0.00 5.01
715 2453 2.742372 GATTGTGCGTCCGGTGCT 60.742 61.111 19.38 2.46 0.00 4.40
716 2454 3.027170 GATTGTGCGTCCGGTGCTG 62.027 63.158 19.38 2.38 0.00 4.41
719 2457 4.980805 GTGCGTCCGGTGCTGGAA 62.981 66.667 19.38 0.03 40.44 3.53
720 2458 4.980805 TGCGTCCGGTGCTGGAAC 62.981 66.667 19.38 0.36 40.44 3.62
721 2459 4.980805 GCGTCCGGTGCTGGAACA 62.981 66.667 13.11 0.00 40.44 3.18
722 2460 2.047274 CGTCCGGTGCTGGAACAT 60.047 61.111 0.00 0.00 40.44 2.71
723 2461 1.216977 CGTCCGGTGCTGGAACATA 59.783 57.895 0.00 0.00 40.44 2.29
724 2462 0.390603 CGTCCGGTGCTGGAACATAA 60.391 55.000 0.00 0.00 40.44 1.90
725 2463 1.816074 GTCCGGTGCTGGAACATAAA 58.184 50.000 0.00 0.00 40.44 1.40
726 2464 1.737793 GTCCGGTGCTGGAACATAAAG 59.262 52.381 0.00 0.00 40.44 1.85
727 2465 1.349688 TCCGGTGCTGGAACATAAAGT 59.650 47.619 0.00 0.00 38.20 2.66
728 2466 1.468520 CCGGTGCTGGAACATAAAGTG 59.531 52.381 0.00 0.00 38.20 3.16
729 2467 2.151202 CGGTGCTGGAACATAAAGTGT 58.849 47.619 0.00 0.00 44.84 3.55
730 2468 3.331150 CGGTGCTGGAACATAAAGTGTA 58.669 45.455 0.00 0.00 41.14 2.90
731 2469 3.370978 CGGTGCTGGAACATAAAGTGTAG 59.629 47.826 0.00 0.00 41.14 2.74
732 2470 4.324267 GGTGCTGGAACATAAAGTGTAGT 58.676 43.478 0.00 0.00 41.14 2.73
733 2471 4.392138 GGTGCTGGAACATAAAGTGTAGTC 59.608 45.833 0.00 0.00 41.14 2.59
734 2472 5.238583 GTGCTGGAACATAAAGTGTAGTCT 58.761 41.667 0.00 0.00 41.14 3.24
735 2473 5.120830 GTGCTGGAACATAAAGTGTAGTCTG 59.879 44.000 0.00 0.00 41.14 3.51
736 2474 4.631813 GCTGGAACATAAAGTGTAGTCTGG 59.368 45.833 0.00 0.00 41.14 3.86
737 2475 5.160607 TGGAACATAAAGTGTAGTCTGGG 57.839 43.478 0.00 0.00 41.14 4.45
738 2476 4.595781 TGGAACATAAAGTGTAGTCTGGGT 59.404 41.667 0.00 0.00 41.14 4.51
739 2477 5.781306 TGGAACATAAAGTGTAGTCTGGGTA 59.219 40.000 0.00 0.00 41.14 3.69
740 2478 6.070995 TGGAACATAAAGTGTAGTCTGGGTAG 60.071 42.308 0.00 0.00 41.14 3.18
741 2479 6.070938 GGAACATAAAGTGTAGTCTGGGTAGT 60.071 42.308 0.00 0.00 41.14 2.73
751 2489 2.176889 GTCTGGGTAGTTGCTGGAGTA 58.823 52.381 0.00 0.00 0.00 2.59
820 2558 4.795970 GTGTACTCCACAACAAACTCTG 57.204 45.455 0.00 0.00 43.92 3.35
853 2591 4.907879 AAGAAAAACAACTCTGGCTCTG 57.092 40.909 0.00 0.00 0.00 3.35
854 2592 3.891049 AGAAAAACAACTCTGGCTCTGT 58.109 40.909 0.00 0.00 0.00 3.41
855 2593 3.879892 AGAAAAACAACTCTGGCTCTGTC 59.120 43.478 0.00 0.00 0.00 3.51
863 2602 1.898472 CTCTGGCTCTGTCTTGGAGAA 59.102 52.381 0.00 0.00 33.03 2.87
869 2608 5.630121 TGGCTCTGTCTTGGAGAATAAAAA 58.370 37.500 0.00 0.00 33.03 1.94
922 2661 1.909700 AGATGTGACGGTTGGCATTT 58.090 45.000 0.00 0.00 0.00 2.32
938 2677 7.148323 GGTTGGCATTTCATAATTTAACCCAAC 60.148 37.037 0.00 0.00 44.59 3.77
958 3327 2.094649 ACTCGGGTTCGAATCTTCTCAC 60.095 50.000 8.59 0.00 45.47 3.51
961 3330 2.735762 CGGGTTCGAATCTTCTCACCTC 60.736 54.545 8.59 0.00 39.00 3.85
970 3339 7.061054 TCGAATCTTCTCACCTCCTATAAGAA 58.939 38.462 0.00 0.00 0.00 2.52
982 3351 5.485708 CCTCCTATAAGAATAAGACAGGGGG 59.514 48.000 0.00 0.00 0.00 5.40
983 3352 6.303427 TCCTATAAGAATAAGACAGGGGGA 57.697 41.667 0.00 0.00 0.00 4.81
984 3353 6.323737 TCCTATAAGAATAAGACAGGGGGAG 58.676 44.000 0.00 0.00 0.00 4.30
985 3354 6.085416 CCTATAAGAATAAGACAGGGGGAGT 58.915 44.000 0.00 0.00 0.00 3.85
986 3355 7.075915 TCCTATAAGAATAAGACAGGGGGAGTA 59.924 40.741 0.00 0.00 0.00 2.59
987 3356 7.901861 CCTATAAGAATAAGACAGGGGGAGTAT 59.098 40.741 0.00 0.00 0.00 2.12
1056 3865 7.807907 TGAGAAACAAAGTGACTGTTTTCTTTC 59.192 33.333 14.04 3.98 44.85 2.62
1065 3874 6.201806 AGTGACTGTTTTCTTTCGAGAATCTG 59.798 38.462 0.00 0.00 0.00 2.90
1066 3875 5.050091 TGACTGTTTTCTTTCGAGAATCTGC 60.050 40.000 0.00 0.00 0.00 4.26
1073 3882 8.682895 GTTTTCTTTCGAGAATCTGCTTTTTAC 58.317 33.333 0.00 0.00 0.00 2.01
1089 3898 7.531716 TGCTTTTTACAAGAGTTTTCTTTCGA 58.468 30.769 0.00 0.00 41.71 3.71
1105 3914 6.576662 TCTTTCGAGAATCAAGTACTGACT 57.423 37.500 0.00 0.00 36.69 3.41
1106 3915 6.382608 TCTTTCGAGAATCAAGTACTGACTG 58.617 40.000 0.00 0.00 36.69 3.51
1107 3916 5.959618 TTCGAGAATCAAGTACTGACTGA 57.040 39.130 0.00 0.00 36.69 3.41
1108 3917 6.516739 TTCGAGAATCAAGTACTGACTGAT 57.483 37.500 0.00 0.00 36.69 2.90
1109 3918 7.625828 TTCGAGAATCAAGTACTGACTGATA 57.374 36.000 8.59 0.00 36.69 2.15
1110 3919 7.252965 TCGAGAATCAAGTACTGACTGATAG 57.747 40.000 8.59 3.09 36.69 2.08
1111 3920 5.912396 CGAGAATCAAGTACTGACTGATAGC 59.088 44.000 8.59 5.31 36.69 2.97
1119 3928 4.737946 AGTACTGACTGATAGCGAAATGCC 60.738 45.833 0.00 0.00 38.48 4.40
1130 3939 2.337583 GCGAAATGCCCTTTTCCTTTC 58.662 47.619 0.00 0.00 37.76 2.62
1174 3983 4.463891 CCAGTGAAAAGCCCAGATAAATGT 59.536 41.667 0.00 0.00 0.00 2.71
1175 3984 5.047092 CCAGTGAAAAGCCCAGATAAATGTT 60.047 40.000 0.00 0.00 0.00 2.71
1189 3998 7.106239 CAGATAAATGTTGTCCTACTTCCTGT 58.894 38.462 0.00 0.00 0.00 4.00
1201 4010 4.279671 CCTACTTCCTGTATTCATCTCGCT 59.720 45.833 0.00 0.00 0.00 4.93
1234 4043 2.429930 CCAGACCAAACCCTCGCA 59.570 61.111 0.00 0.00 0.00 5.10
1382 4837 1.135046 CACCGATCTGCAGATTAGCG 58.865 55.000 29.26 25.51 37.31 4.26
1429 4886 2.443394 GGATCCATGGAGACGGCCA 61.443 63.158 21.33 0.00 43.23 5.36
1921 5566 7.001674 TGTGTTTGAGTTGGTACCTATCAATT 58.998 34.615 20.41 3.33 30.56 2.32
1923 5568 7.174253 GTGTTTGAGTTGGTACCTATCAATTCA 59.826 37.037 20.41 18.77 40.02 2.57
1924 5569 7.721842 TGTTTGAGTTGGTACCTATCAATTCAA 59.278 33.333 20.41 16.99 45.29 2.69
2362 6048 1.134946 GCACCCAGAACACAATATGGC 59.865 52.381 0.00 0.00 0.00 4.40
2384 6070 4.621991 CATTCGTAACCATAGGACTGAGG 58.378 47.826 0.00 0.00 31.78 3.86
2408 6103 1.882623 GGGTTCCAAGAGCTTGTGAAG 59.117 52.381 9.18 0.00 38.85 3.02
2472 6167 2.101415 TCTGATCTTGGCTGGTATGTCG 59.899 50.000 0.00 0.00 0.00 4.35
2627 6324 2.774687 ACAACGGTGATTTGGGTAGAC 58.225 47.619 7.88 0.00 0.00 2.59
2632 6329 2.747446 CGGTGATTTGGGTAGACCTTTG 59.253 50.000 0.00 0.00 41.11 2.77
2766 6489 5.745227 AGGATAATTGATCGTCTTGTTGGT 58.255 37.500 0.00 0.00 35.12 3.67
2838 6562 8.243426 TCTGTTTGTGGATAATTTTATCTGTGC 58.757 33.333 9.53 0.00 39.53 4.57
2839 6563 7.890515 TGTTTGTGGATAATTTTATCTGTGCA 58.109 30.769 9.53 0.00 39.53 4.57
2840 6564 7.812191 TGTTTGTGGATAATTTTATCTGTGCAC 59.188 33.333 10.75 10.75 39.53 4.57
2841 6565 6.449635 TGTGGATAATTTTATCTGTGCACC 57.550 37.500 15.69 0.00 39.53 5.01
2842 6566 5.948758 TGTGGATAATTTTATCTGTGCACCA 59.051 36.000 15.69 0.34 39.53 4.17
2843 6567 6.435591 TGTGGATAATTTTATCTGTGCACCAA 59.564 34.615 15.69 2.03 39.53 3.67
2844 6568 6.751888 GTGGATAATTTTATCTGTGCACCAAC 59.248 38.462 15.69 0.00 39.53 3.77
2850 6574 6.900568 TTTTATCTGTGCACCAACTTTTTG 57.099 33.333 15.69 0.00 0.00 2.44
2859 6583 2.723124 CCAACTTTTTGGTGCGCTAT 57.277 45.000 9.73 0.00 46.63 2.97
2872 6596 4.141574 TGGTGCGCTATAGGTTATTTCCTT 60.142 41.667 9.73 0.00 38.86 3.36
2873 6597 4.213482 GGTGCGCTATAGGTTATTTCCTTG 59.787 45.833 9.73 0.00 38.86 3.61
2912 6636 7.368198 CTCTACCCTAGAGCCTAAGATTTTT 57.632 40.000 0.00 0.00 45.05 1.94
2924 6648 5.010617 GCCTAAGATTTTTCTGTTTGGGTGA 59.989 40.000 0.00 0.00 0.00 4.02
2954 6678 0.657840 GCTGTTGCATTACTAGGGCG 59.342 55.000 0.00 0.00 39.41 6.13
2956 6680 2.356135 CTGTTGCATTACTAGGGCGTT 58.644 47.619 0.00 0.00 0.00 4.84
2957 6681 2.351726 CTGTTGCATTACTAGGGCGTTC 59.648 50.000 0.00 0.00 0.00 3.95
2958 6682 2.027561 TGTTGCATTACTAGGGCGTTCT 60.028 45.455 0.00 0.00 0.00 3.01
2959 6683 2.309528 TGCATTACTAGGGCGTTCTG 57.690 50.000 0.00 0.00 0.00 3.02
2962 6686 3.007635 GCATTACTAGGGCGTTCTGTTT 58.992 45.455 0.00 0.00 0.00 2.83
2963 6687 3.181510 GCATTACTAGGGCGTTCTGTTTG 60.182 47.826 0.00 0.00 0.00 2.93
2964 6688 3.756933 TTACTAGGGCGTTCTGTTTGT 57.243 42.857 0.00 0.00 0.00 2.83
2965 6689 2.165319 ACTAGGGCGTTCTGTTTGTC 57.835 50.000 0.00 0.00 0.00 3.18
3116 6847 1.784358 AATCCTTCCCATACGTCCGA 58.216 50.000 0.00 0.00 0.00 4.55
3236 6967 7.400052 ACCATTTCAGTAAATATGGGCTTCTTT 59.600 33.333 0.00 0.00 33.45 2.52
3243 6974 4.639135 AATATGGGCTTCTTTTCTTCGC 57.361 40.909 0.00 0.00 0.00 4.70
3258 6989 2.044946 CGCTCCCTTCCTTTGGGG 60.045 66.667 0.00 0.00 44.67 4.96
3403 8823 4.651778 TCTAAAATGACAGGAGGTTGTGG 58.348 43.478 0.00 0.00 0.00 4.17
3746 9934 5.949735 TCATTTTCGCCTTCCTTTTATGTC 58.050 37.500 0.00 0.00 0.00 3.06
3841 10029 1.519408 AAGGCATAGTGCGTCGTTTT 58.481 45.000 0.00 0.00 46.21 2.43
3895 10085 8.212372 GGTACGCTTCTAAGAAAATTTGTTTC 57.788 34.615 0.00 0.00 0.00 2.78
3896 10086 8.074370 GGTACGCTTCTAAGAAAATTTGTTTCT 58.926 33.333 0.00 0.00 40.20 2.52
3899 10089 9.052759 ACGCTTCTAAGAAAATTTGTTTCTAGA 57.947 29.630 1.96 0.00 37.75 2.43
3900 10090 9.535270 CGCTTCTAAGAAAATTTGTTTCTAGAG 57.465 33.333 1.96 3.83 37.75 2.43
3906 10096 8.691661 AAGAAAATTTGTTTCTAGAGCTACCA 57.308 30.769 1.96 0.00 37.75 3.25
3907 10097 8.870075 AGAAAATTTGTTTCTAGAGCTACCAT 57.130 30.769 0.00 0.00 37.03 3.55
3908 10098 8.734386 AGAAAATTTGTTTCTAGAGCTACCATG 58.266 33.333 0.00 0.00 37.03 3.66
3911 10101 6.360370 TTTGTTTCTAGAGCTACCATGACT 57.640 37.500 0.00 0.00 0.00 3.41
3912 10102 7.476540 TTTGTTTCTAGAGCTACCATGACTA 57.523 36.000 0.00 0.00 0.00 2.59
3913 10103 7.476540 TTGTTTCTAGAGCTACCATGACTAA 57.523 36.000 0.00 0.00 0.00 2.24
3915 10105 8.762481 TGTTTCTAGAGCTACCATGACTAATA 57.238 34.615 0.00 0.00 0.00 0.98
3916 10106 9.197306 TGTTTCTAGAGCTACCATGACTAATAA 57.803 33.333 0.00 0.00 0.00 1.40
3919 10109 9.588096 TTCTAGAGCTACCATGACTAATAATCA 57.412 33.333 0.00 0.00 0.00 2.57
3920 10110 9.760926 TCTAGAGCTACCATGACTAATAATCAT 57.239 33.333 0.00 0.00 37.27 2.45
3945 10174 4.042187 ACTTGTTTCATCCTTAGTCCAGCT 59.958 41.667 0.00 0.00 0.00 4.24
3963 10192 8.769359 AGTCCAGCTTTACAATACCTAGTTTAT 58.231 33.333 0.00 0.00 0.00 1.40
3994 10223 5.360144 TGTTCCTAGAGCTACCATGACTAAC 59.640 44.000 0.00 0.00 0.00 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.363990 ACCCACTCACGCGCTCTG 62.364 66.667 5.73 0.00 0.00 3.35
23 24 4.363990 CACCCACTCACGCGCTCT 62.364 66.667 5.73 0.00 0.00 4.09
26 27 4.980805 TTCCACCCACTCACGCGC 62.981 66.667 5.73 0.00 0.00 6.86
27 28 2.280524 TTTCCACCCACTCACGCG 60.281 61.111 3.53 3.53 0.00 6.01
28 29 2.604174 CGTTTCCACCCACTCACGC 61.604 63.158 0.00 0.00 0.00 5.34
29 30 1.227438 ACGTTTCCACCCACTCACG 60.227 57.895 0.00 0.00 0.00 4.35
30 31 0.179067 TCACGTTTCCACCCACTCAC 60.179 55.000 0.00 0.00 0.00 3.51
31 32 0.105964 CTCACGTTTCCACCCACTCA 59.894 55.000 0.00 0.00 0.00 3.41
32 33 0.106149 ACTCACGTTTCCACCCACTC 59.894 55.000 0.00 0.00 0.00 3.51
33 34 0.544697 AACTCACGTTTCCACCCACT 59.455 50.000 0.00 0.00 0.00 4.00
34 35 0.661020 CAACTCACGTTTCCACCCAC 59.339 55.000 0.00 0.00 0.00 4.61
35 36 0.253610 ACAACTCACGTTTCCACCCA 59.746 50.000 0.00 0.00 0.00 4.51
36 37 0.661020 CACAACTCACGTTTCCACCC 59.339 55.000 0.00 0.00 0.00 4.61
37 38 1.063469 CACACAACTCACGTTTCCACC 59.937 52.381 0.00 0.00 0.00 4.61
38 39 1.531058 GCACACAACTCACGTTTCCAC 60.531 52.381 0.00 0.00 0.00 4.02
39 40 0.730265 GCACACAACTCACGTTTCCA 59.270 50.000 0.00 0.00 0.00 3.53
40 41 0.028902 GGCACACAACTCACGTTTCC 59.971 55.000 0.00 0.00 0.00 3.13
41 42 0.028902 GGGCACACAACTCACGTTTC 59.971 55.000 0.00 0.00 0.00 2.78
42 43 0.393808 AGGGCACACAACTCACGTTT 60.394 50.000 0.00 0.00 0.00 3.60
43 44 1.095228 CAGGGCACACAACTCACGTT 61.095 55.000 0.00 0.00 0.00 3.99
44 45 1.523711 CAGGGCACACAACTCACGT 60.524 57.895 0.00 0.00 0.00 4.49
45 46 2.253758 CCAGGGCACACAACTCACG 61.254 63.158 0.00 0.00 0.00 4.35
46 47 2.555547 GCCAGGGCACACAACTCAC 61.556 63.158 5.20 0.00 41.49 3.51
47 48 2.203337 GCCAGGGCACACAACTCA 60.203 61.111 5.20 0.00 41.49 3.41
70 71 2.044758 GAAGAGGCTTTATACCCCGGA 58.955 52.381 0.73 0.00 0.00 5.14
73 74 3.200165 ACACAGAAGAGGCTTTATACCCC 59.800 47.826 0.00 0.00 0.00 4.95
79 80 1.968493 ACGGACACAGAAGAGGCTTTA 59.032 47.619 0.00 0.00 0.00 1.85
89 90 1.346395 AGCCATTACAACGGACACAGA 59.654 47.619 0.00 0.00 0.00 3.41
91 92 1.202710 ACAGCCATTACAACGGACACA 60.203 47.619 0.00 0.00 0.00 3.72
108 109 0.820891 AGCACAAACTCAGCCCACAG 60.821 55.000 0.00 0.00 0.00 3.66
109 110 0.395586 AAGCACAAACTCAGCCCACA 60.396 50.000 0.00 0.00 0.00 4.17
113 114 2.884639 TCCTTTAAGCACAAACTCAGCC 59.115 45.455 0.00 0.00 0.00 4.85
114 115 4.568152 TTCCTTTAAGCACAAACTCAGC 57.432 40.909 0.00 0.00 0.00 4.26
128 129 3.364167 CGACGAACGGCAATTTTCCTTTA 60.364 43.478 0.11 0.00 38.46 1.85
141 142 0.797542 TATTTTTGGGCGACGAACGG 59.202 50.000 0.00 0.00 42.83 4.44
142 143 2.350498 AGATATTTTTGGGCGACGAACG 59.650 45.455 0.00 0.00 45.66 3.95
143 144 4.095610 CAAGATATTTTTGGGCGACGAAC 58.904 43.478 0.00 0.00 0.00 3.95
159 174 5.590818 AGTAGAAAGGAGGGACACAAGATA 58.409 41.667 0.00 0.00 0.00 1.98
163 178 4.658901 AGAAAGTAGAAAGGAGGGACACAA 59.341 41.667 0.00 0.00 0.00 3.33
195 1188 0.609151 TCTCTCGTCGTCTCTCTGGT 59.391 55.000 0.00 0.00 0.00 4.00
207 1200 0.913205 TAGCTCACCCTCTCTCTCGT 59.087 55.000 0.00 0.00 0.00 4.18
210 1203 0.555769 CCCTAGCTCACCCTCTCTCT 59.444 60.000 0.00 0.00 0.00 3.10
227 1960 4.176752 CCGAACCCTAGCTGGCCC 62.177 72.222 0.00 0.00 0.00 5.80
281 2015 0.107410 CCCACGCCTGCAGGTATTTA 60.107 55.000 32.81 0.00 37.57 1.40
357 2095 0.238553 GAAGAGAAAGGGCACGTTGC 59.761 55.000 0.00 0.00 44.08 4.17
370 2108 2.735772 GCGGCTGATGGGGAAGAGA 61.736 63.158 0.00 0.00 0.00 3.10
371 2109 2.203126 GCGGCTGATGGGGAAGAG 60.203 66.667 0.00 0.00 0.00 2.85
372 2110 3.008517 TGCGGCTGATGGGGAAGA 61.009 61.111 0.00 0.00 0.00 2.87
374 2112 4.424711 GGTGCGGCTGATGGGGAA 62.425 66.667 0.00 0.00 0.00 3.97
387 2125 2.093537 CTAGGAGATGGCGAGGGTGC 62.094 65.000 0.00 0.00 0.00 5.01
390 2128 1.152440 ACCTAGGAGATGGCGAGGG 60.152 63.158 17.98 0.00 0.00 4.30
394 2132 1.365633 GCAGACCTAGGAGATGGCG 59.634 63.158 17.98 0.00 0.00 5.69
395 2133 0.833287 TTGCAGACCTAGGAGATGGC 59.167 55.000 17.98 11.76 0.00 4.40
398 2136 2.393646 GGACTTGCAGACCTAGGAGAT 58.606 52.381 17.98 0.00 0.00 2.75
399 2137 1.619977 GGGACTTGCAGACCTAGGAGA 60.620 57.143 17.98 0.00 30.67 3.71
400 2138 0.827368 GGGACTTGCAGACCTAGGAG 59.173 60.000 17.98 3.24 30.67 3.69
401 2139 0.413832 AGGGACTTGCAGACCTAGGA 59.586 55.000 17.98 0.00 27.25 2.94
402 2140 0.827368 GAGGGACTTGCAGACCTAGG 59.173 60.000 7.41 7.41 41.55 3.02
403 2141 1.754226 GAGAGGGACTTGCAGACCTAG 59.246 57.143 1.26 0.00 41.55 3.02
404 2142 1.619977 GGAGAGGGACTTGCAGACCTA 60.620 57.143 1.26 0.00 41.55 3.08
405 2143 0.907230 GGAGAGGGACTTGCAGACCT 60.907 60.000 0.88 0.88 41.55 3.85
406 2144 1.599576 GGAGAGGGACTTGCAGACC 59.400 63.158 0.00 0.00 41.55 3.85
407 2145 1.216710 CGGAGAGGGACTTGCAGAC 59.783 63.158 0.00 0.00 41.55 3.51
408 2146 1.228894 ACGGAGAGGGACTTGCAGA 60.229 57.895 0.00 0.00 41.55 4.26
409 2147 1.216710 GACGGAGAGGGACTTGCAG 59.783 63.158 0.00 0.00 41.55 4.41
410 2148 2.283529 GGACGGAGAGGGACTTGCA 61.284 63.158 0.00 0.00 41.55 4.08
411 2149 1.985116 AGGACGGAGAGGGACTTGC 60.985 63.158 0.00 0.00 41.55 4.01
412 2150 1.893786 CAGGACGGAGAGGGACTTG 59.106 63.158 0.00 0.00 41.55 3.16
413 2151 1.985116 GCAGGACGGAGAGGGACTT 60.985 63.158 0.00 0.00 41.55 3.01
415 2153 2.363147 AGCAGGACGGAGAGGGAC 60.363 66.667 0.00 0.00 0.00 4.46
416 2154 2.043852 GAGCAGGACGGAGAGGGA 60.044 66.667 0.00 0.00 0.00 4.20
417 2155 3.522731 CGAGCAGGACGGAGAGGG 61.523 72.222 0.00 0.00 0.00 4.30
418 2156 2.752238 ACGAGCAGGACGGAGAGG 60.752 66.667 0.00 0.00 34.93 3.69
419 2157 2.336478 ACACGAGCAGGACGGAGAG 61.336 63.158 0.00 0.00 34.93 3.20
420 2158 2.282251 ACACGAGCAGGACGGAGA 60.282 61.111 0.00 0.00 34.93 3.71
421 2159 2.126307 CACACGAGCAGGACGGAG 60.126 66.667 0.00 0.00 34.93 4.63
422 2160 4.357947 GCACACGAGCAGGACGGA 62.358 66.667 0.00 0.00 34.93 4.69
423 2161 4.662961 TGCACACGAGCAGGACGG 62.663 66.667 0.00 0.00 40.11 4.79
429 2167 4.314440 GACCCCTGCACACGAGCA 62.314 66.667 0.00 0.00 43.35 4.26
431 2169 4.742201 CGGACCCCTGCACACGAG 62.742 72.222 0.00 0.00 0.00 4.18
433 2171 4.619227 AACGGACCCCTGCACACG 62.619 66.667 0.00 0.00 0.00 4.49
434 2172 2.203294 AAACGGACCCCTGCACAC 60.203 61.111 0.00 0.00 0.00 3.82
435 2173 2.112297 GAAACGGACCCCTGCACA 59.888 61.111 0.00 0.00 0.00 4.57
436 2174 2.671963 GGAAACGGACCCCTGCAC 60.672 66.667 0.00 0.00 0.00 4.57
437 2175 3.172106 TGGAAACGGACCCCTGCA 61.172 61.111 0.00 0.00 0.00 4.41
438 2176 2.671963 GTGGAAACGGACCCCTGC 60.672 66.667 0.00 0.00 0.00 4.85
439 2177 0.688487 TAAGTGGAAACGGACCCCTG 59.312 55.000 0.00 0.00 0.00 4.45
440 2178 0.689055 GTAAGTGGAAACGGACCCCT 59.311 55.000 0.00 0.00 0.00 4.79
441 2179 0.397564 TGTAAGTGGAAACGGACCCC 59.602 55.000 0.00 0.00 0.00 4.95
442 2180 2.289819 TGATGTAAGTGGAAACGGACCC 60.290 50.000 0.00 0.00 0.00 4.46
443 2181 3.048337 TGATGTAAGTGGAAACGGACC 57.952 47.619 0.00 0.00 0.00 4.46
444 2182 5.622770 AATTGATGTAAGTGGAAACGGAC 57.377 39.130 0.00 0.00 0.00 4.79
445 2183 5.182380 GGAAATTGATGTAAGTGGAAACGGA 59.818 40.000 0.00 0.00 0.00 4.69
446 2184 5.183140 AGGAAATTGATGTAAGTGGAAACGG 59.817 40.000 0.00 0.00 0.00 4.44
447 2185 6.254281 AGGAAATTGATGTAAGTGGAAACG 57.746 37.500 0.00 0.00 0.00 3.60
448 2186 8.956426 TGATAGGAAATTGATGTAAGTGGAAAC 58.044 33.333 0.00 0.00 0.00 2.78
449 2187 9.177608 CTGATAGGAAATTGATGTAAGTGGAAA 57.822 33.333 0.00 0.00 0.00 3.13
450 2188 7.775093 CCTGATAGGAAATTGATGTAAGTGGAA 59.225 37.037 0.00 0.00 37.67 3.53
451 2189 7.282585 CCTGATAGGAAATTGATGTAAGTGGA 58.717 38.462 0.00 0.00 37.67 4.02
452 2190 6.488006 CCCTGATAGGAAATTGATGTAAGTGG 59.512 42.308 0.00 0.00 37.67 4.00
453 2191 7.282585 TCCCTGATAGGAAATTGATGTAAGTG 58.717 38.462 0.00 0.00 37.67 3.16
454 2192 7.451731 TCCCTGATAGGAAATTGATGTAAGT 57.548 36.000 0.00 0.00 37.67 2.24
466 2204 3.526899 TCAGTTGGTTCCCTGATAGGAA 58.473 45.455 0.00 0.00 43.77 3.36
467 2205 3.199442 TCAGTTGGTTCCCTGATAGGA 57.801 47.619 0.00 0.00 37.67 2.94
468 2206 3.264450 AGTTCAGTTGGTTCCCTGATAGG 59.736 47.826 0.00 0.00 37.54 2.57
469 2207 4.508662 GAGTTCAGTTGGTTCCCTGATAG 58.491 47.826 0.00 0.00 37.54 2.08
470 2208 3.263425 GGAGTTCAGTTGGTTCCCTGATA 59.737 47.826 0.00 0.00 37.54 2.15
471 2209 2.040412 GGAGTTCAGTTGGTTCCCTGAT 59.960 50.000 0.00 0.00 37.54 2.90
472 2210 1.420138 GGAGTTCAGTTGGTTCCCTGA 59.580 52.381 0.00 0.00 35.97 3.86
473 2211 1.878102 CGGAGTTCAGTTGGTTCCCTG 60.878 57.143 0.00 0.00 0.00 4.45
474 2212 0.396811 CGGAGTTCAGTTGGTTCCCT 59.603 55.000 0.00 0.00 0.00 4.20
475 2213 0.395312 TCGGAGTTCAGTTGGTTCCC 59.605 55.000 0.00 0.00 0.00 3.97
476 2214 2.474410 ATCGGAGTTCAGTTGGTTCC 57.526 50.000 0.00 0.00 0.00 3.62
477 2215 4.153655 GGTTAATCGGAGTTCAGTTGGTTC 59.846 45.833 0.00 0.00 0.00 3.62
478 2216 4.070009 GGTTAATCGGAGTTCAGTTGGTT 58.930 43.478 0.00 0.00 0.00 3.67
479 2217 3.071892 TGGTTAATCGGAGTTCAGTTGGT 59.928 43.478 0.00 0.00 0.00 3.67
480 2218 3.670625 TGGTTAATCGGAGTTCAGTTGG 58.329 45.455 0.00 0.00 0.00 3.77
481 2219 5.008217 TGTTTGGTTAATCGGAGTTCAGTTG 59.992 40.000 0.00 0.00 0.00 3.16
482 2220 5.127491 TGTTTGGTTAATCGGAGTTCAGTT 58.873 37.500 0.00 0.00 0.00 3.16
483 2221 4.710324 TGTTTGGTTAATCGGAGTTCAGT 58.290 39.130 0.00 0.00 0.00 3.41
484 2222 5.238650 ACTTGTTTGGTTAATCGGAGTTCAG 59.761 40.000 0.00 0.00 0.00 3.02
485 2223 5.127491 ACTTGTTTGGTTAATCGGAGTTCA 58.873 37.500 0.00 0.00 0.00 3.18
486 2224 5.684550 ACTTGTTTGGTTAATCGGAGTTC 57.315 39.130 0.00 0.00 0.00 3.01
487 2225 5.826208 AGAACTTGTTTGGTTAATCGGAGTT 59.174 36.000 0.00 0.00 0.00 3.01
488 2226 5.374071 AGAACTTGTTTGGTTAATCGGAGT 58.626 37.500 0.00 0.00 0.00 3.85
489 2227 5.941948 AGAACTTGTTTGGTTAATCGGAG 57.058 39.130 0.00 0.00 0.00 4.63
490 2228 6.067263 CAAGAACTTGTTTGGTTAATCGGA 57.933 37.500 6.41 0.00 35.92 4.55
504 2242 5.880054 ATAATGGGACGAACAAGAACTTG 57.120 39.130 12.22 12.22 45.58 3.16
505 2243 6.264518 ACAAATAATGGGACGAACAAGAACTT 59.735 34.615 0.00 0.00 0.00 2.66
506 2244 5.768164 ACAAATAATGGGACGAACAAGAACT 59.232 36.000 0.00 0.00 0.00 3.01
507 2245 5.856455 CACAAATAATGGGACGAACAAGAAC 59.144 40.000 0.00 0.00 32.54 3.01
508 2246 5.765677 TCACAAATAATGGGACGAACAAGAA 59.234 36.000 0.00 0.00 36.22 2.52
509 2247 5.309638 TCACAAATAATGGGACGAACAAGA 58.690 37.500 0.00 0.00 36.22 3.02
510 2248 5.621197 TCACAAATAATGGGACGAACAAG 57.379 39.130 0.00 0.00 36.22 3.16
511 2249 6.582677 AATCACAAATAATGGGACGAACAA 57.417 33.333 0.00 0.00 46.40 2.83
512 2250 6.385843 CAAATCACAAATAATGGGACGAACA 58.614 36.000 0.00 0.00 46.40 3.18
513 2251 5.288472 GCAAATCACAAATAATGGGACGAAC 59.712 40.000 0.00 0.00 46.40 3.95
514 2252 5.047731 TGCAAATCACAAATAATGGGACGAA 60.048 36.000 0.00 0.00 46.40 3.85
515 2253 4.460731 TGCAAATCACAAATAATGGGACGA 59.539 37.500 0.00 0.00 46.40 4.20
516 2254 4.742417 TGCAAATCACAAATAATGGGACG 58.258 39.130 0.00 0.00 46.40 4.79
517 2255 5.964758 TCTGCAAATCACAAATAATGGGAC 58.035 37.500 0.00 0.00 46.40 4.46
519 2257 9.850628 CTATATCTGCAAATCACAAATAATGGG 57.149 33.333 0.00 0.00 0.00 4.00
520 2258 9.350357 GCTATATCTGCAAATCACAAATAATGG 57.650 33.333 0.00 0.00 0.00 3.16
524 2262 9.440773 CCTAGCTATATCTGCAAATCACAAATA 57.559 33.333 0.00 0.00 0.00 1.40
525 2263 7.094463 GCCTAGCTATATCTGCAAATCACAAAT 60.094 37.037 0.00 0.00 0.00 2.32
526 2264 6.205464 GCCTAGCTATATCTGCAAATCACAAA 59.795 38.462 0.00 0.00 0.00 2.83
527 2265 5.702670 GCCTAGCTATATCTGCAAATCACAA 59.297 40.000 0.00 0.00 0.00 3.33
528 2266 5.221702 TGCCTAGCTATATCTGCAAATCACA 60.222 40.000 0.00 0.00 0.00 3.58
529 2267 5.240891 TGCCTAGCTATATCTGCAAATCAC 58.759 41.667 0.00 0.00 0.00 3.06
530 2268 5.488262 TGCCTAGCTATATCTGCAAATCA 57.512 39.130 0.00 0.00 0.00 2.57
531 2269 6.429385 AGTTTGCCTAGCTATATCTGCAAATC 59.571 38.462 20.41 16.13 46.43 2.17
532 2270 6.302269 AGTTTGCCTAGCTATATCTGCAAAT 58.698 36.000 20.41 12.40 46.43 2.32
533 2271 5.684704 AGTTTGCCTAGCTATATCTGCAAA 58.315 37.500 16.66 16.66 43.87 3.68
534 2272 5.163311 TGAGTTTGCCTAGCTATATCTGCAA 60.163 40.000 0.00 2.54 36.98 4.08
535 2273 4.344968 TGAGTTTGCCTAGCTATATCTGCA 59.655 41.667 0.00 0.00 0.00 4.41
536 2274 4.887748 TGAGTTTGCCTAGCTATATCTGC 58.112 43.478 0.00 0.00 0.00 4.26
537 2275 5.407995 GCTTGAGTTTGCCTAGCTATATCTG 59.592 44.000 0.00 0.00 31.42 2.90
538 2276 5.306678 AGCTTGAGTTTGCCTAGCTATATCT 59.693 40.000 0.00 0.00 40.04 1.98
539 2277 5.546526 AGCTTGAGTTTGCCTAGCTATATC 58.453 41.667 0.00 0.00 40.04 1.63
540 2278 5.512232 GGAGCTTGAGTTTGCCTAGCTATAT 60.512 44.000 0.00 0.00 41.42 0.86
541 2279 4.202264 GGAGCTTGAGTTTGCCTAGCTATA 60.202 45.833 0.00 0.00 41.42 1.31
542 2280 3.432890 GGAGCTTGAGTTTGCCTAGCTAT 60.433 47.826 0.00 0.00 41.42 2.97
543 2281 2.093447 GGAGCTTGAGTTTGCCTAGCTA 60.093 50.000 0.00 0.00 41.42 3.32
544 2282 1.339535 GGAGCTTGAGTTTGCCTAGCT 60.340 52.381 0.00 0.00 43.36 3.32
545 2283 1.090728 GGAGCTTGAGTTTGCCTAGC 58.909 55.000 0.00 0.00 33.64 3.42
546 2284 2.479566 TGGAGCTTGAGTTTGCCTAG 57.520 50.000 0.00 0.00 0.00 3.02
547 2285 2.783135 CTTGGAGCTTGAGTTTGCCTA 58.217 47.619 0.00 0.00 0.00 3.93
548 2286 1.613836 CTTGGAGCTTGAGTTTGCCT 58.386 50.000 0.00 0.00 0.00 4.75
549 2287 0.038801 GCTTGGAGCTTGAGTTTGCC 60.039 55.000 0.00 0.00 38.45 4.52
550 2288 0.670162 TGCTTGGAGCTTGAGTTTGC 59.330 50.000 1.29 0.00 42.97 3.68
551 2289 3.441496 TTTGCTTGGAGCTTGAGTTTG 57.559 42.857 1.29 0.00 42.97 2.93
552 2290 4.677673 AATTTGCTTGGAGCTTGAGTTT 57.322 36.364 1.29 0.00 42.97 2.66
553 2291 4.829492 AGTAATTTGCTTGGAGCTTGAGTT 59.171 37.500 1.29 0.00 42.97 3.01
554 2292 4.401925 AGTAATTTGCTTGGAGCTTGAGT 58.598 39.130 1.29 0.00 42.97 3.41
555 2293 4.142513 GGAGTAATTTGCTTGGAGCTTGAG 60.143 45.833 1.29 0.00 42.97 3.02
556 2294 3.758554 GGAGTAATTTGCTTGGAGCTTGA 59.241 43.478 1.29 0.00 42.97 3.02
557 2295 3.119352 GGGAGTAATTTGCTTGGAGCTTG 60.119 47.826 1.29 0.00 42.97 4.01
558 2296 3.092301 GGGAGTAATTTGCTTGGAGCTT 58.908 45.455 1.29 0.00 42.97 3.74
559 2297 2.728007 GGGAGTAATTTGCTTGGAGCT 58.272 47.619 1.29 0.00 42.97 4.09
560 2298 1.401905 CGGGAGTAATTTGCTTGGAGC 59.598 52.381 0.00 0.00 42.82 4.70
561 2299 2.017049 CCGGGAGTAATTTGCTTGGAG 58.983 52.381 0.00 0.00 0.00 3.86
562 2300 1.340600 CCCGGGAGTAATTTGCTTGGA 60.341 52.381 18.48 0.00 0.00 3.53
563 2301 1.102978 CCCGGGAGTAATTTGCTTGG 58.897 55.000 18.48 0.00 0.00 3.61
564 2302 0.455815 GCCCGGGAGTAATTTGCTTG 59.544 55.000 29.31 0.00 0.00 4.01
565 2303 0.331616 AGCCCGGGAGTAATTTGCTT 59.668 50.000 29.31 0.00 0.00 3.91
566 2304 0.394352 CAGCCCGGGAGTAATTTGCT 60.394 55.000 29.31 7.59 0.00 3.91
567 2305 2.004808 GCAGCCCGGGAGTAATTTGC 62.005 60.000 29.31 16.78 0.00 3.68
568 2306 1.384222 GGCAGCCCGGGAGTAATTTG 61.384 60.000 29.31 10.79 0.00 2.32
569 2307 1.076995 GGCAGCCCGGGAGTAATTT 60.077 57.895 29.31 0.00 0.00 1.82
570 2308 2.595655 GGCAGCCCGGGAGTAATT 59.404 61.111 29.31 0.00 0.00 1.40
571 2309 3.489513 GGGCAGCCCGGGAGTAAT 61.490 66.667 29.31 0.00 32.13 1.89
583 2321 1.977594 GAATTACGCACACGGGGCAG 61.978 60.000 0.00 0.00 46.04 4.85
584 2322 2.032834 AATTACGCACACGGGGCA 59.967 55.556 0.00 0.00 46.04 5.36
585 2323 1.303091 AAGAATTACGCACACGGGGC 61.303 55.000 0.00 0.00 46.04 5.80
586 2324 0.725117 GAAGAATTACGCACACGGGG 59.275 55.000 0.00 0.00 46.04 5.73
587 2325 1.722011 AGAAGAATTACGCACACGGG 58.278 50.000 0.00 0.00 46.04 5.28
588 2326 2.724839 GCAAGAAGAATTACGCACACGG 60.725 50.000 0.00 0.00 46.04 4.94
590 2328 3.813529 AGCAAGAAGAATTACGCACAC 57.186 42.857 0.00 0.00 0.00 3.82
591 2329 5.334569 GGTTAAGCAAGAAGAATTACGCACA 60.335 40.000 0.00 0.00 0.00 4.57
592 2330 5.086727 GGTTAAGCAAGAAGAATTACGCAC 58.913 41.667 0.00 0.00 0.00 5.34
593 2331 5.001232 AGGTTAAGCAAGAAGAATTACGCA 58.999 37.500 7.52 0.00 0.00 5.24
594 2332 5.106673 ACAGGTTAAGCAAGAAGAATTACGC 60.107 40.000 7.52 0.00 0.00 4.42
595 2333 6.147164 TGACAGGTTAAGCAAGAAGAATTACG 59.853 38.462 7.52 0.00 0.00 3.18
596 2334 7.435068 TGACAGGTTAAGCAAGAAGAATTAC 57.565 36.000 7.52 0.00 0.00 1.89
597 2335 8.514594 CAATGACAGGTTAAGCAAGAAGAATTA 58.485 33.333 7.52 0.00 0.00 1.40
598 2336 7.373493 CAATGACAGGTTAAGCAAGAAGAATT 58.627 34.615 7.52 0.00 0.00 2.17
599 2337 6.571150 GCAATGACAGGTTAAGCAAGAAGAAT 60.571 38.462 7.52 0.00 0.00 2.40
600 2338 5.278463 GCAATGACAGGTTAAGCAAGAAGAA 60.278 40.000 7.52 0.00 0.00 2.52
601 2339 4.216257 GCAATGACAGGTTAAGCAAGAAGA 59.784 41.667 7.52 0.00 0.00 2.87
602 2340 4.217118 AGCAATGACAGGTTAAGCAAGAAG 59.783 41.667 7.52 0.00 0.00 2.85
603 2341 4.144297 AGCAATGACAGGTTAAGCAAGAA 58.856 39.130 7.52 0.00 0.00 2.52
604 2342 3.754965 AGCAATGACAGGTTAAGCAAGA 58.245 40.909 7.52 0.00 0.00 3.02
605 2343 5.824904 ATAGCAATGACAGGTTAAGCAAG 57.175 39.130 7.52 1.56 0.00 4.01
606 2344 5.476599 ACAATAGCAATGACAGGTTAAGCAA 59.523 36.000 7.52 0.00 0.00 3.91
607 2345 5.009631 ACAATAGCAATGACAGGTTAAGCA 58.990 37.500 7.52 0.00 0.00 3.91
608 2346 5.567138 ACAATAGCAATGACAGGTTAAGC 57.433 39.130 0.00 0.00 0.00 3.09
609 2347 7.609760 TGTACAATAGCAATGACAGGTTAAG 57.390 36.000 0.00 0.00 0.00 1.85
610 2348 7.663905 AGTTGTACAATAGCAATGACAGGTTAA 59.336 33.333 12.26 0.00 0.00 2.01
611 2349 7.119116 CAGTTGTACAATAGCAATGACAGGTTA 59.881 37.037 12.26 0.00 0.00 2.85
612 2350 6.003950 AGTTGTACAATAGCAATGACAGGTT 58.996 36.000 12.26 0.00 0.00 3.50
613 2351 5.412594 CAGTTGTACAATAGCAATGACAGGT 59.587 40.000 12.26 0.00 0.00 4.00
614 2352 5.643348 TCAGTTGTACAATAGCAATGACAGG 59.357 40.000 12.26 0.00 0.00 4.00
615 2353 6.369890 ACTCAGTTGTACAATAGCAATGACAG 59.630 38.462 12.26 2.28 0.00 3.51
616 2354 6.147656 CACTCAGTTGTACAATAGCAATGACA 59.852 38.462 12.26 0.00 0.00 3.58
617 2355 6.147821 ACACTCAGTTGTACAATAGCAATGAC 59.852 38.462 12.26 0.00 0.00 3.06
618 2356 6.230472 ACACTCAGTTGTACAATAGCAATGA 58.770 36.000 12.26 3.04 0.00 2.57
619 2357 6.486253 ACACTCAGTTGTACAATAGCAATG 57.514 37.500 12.26 8.97 0.00 2.82
630 2368 6.866770 GCTTCAGTAATGTACACTCAGTTGTA 59.133 38.462 0.00 0.00 0.00 2.41
631 2369 5.696724 GCTTCAGTAATGTACACTCAGTTGT 59.303 40.000 0.00 0.00 0.00 3.32
632 2370 5.928839 AGCTTCAGTAATGTACACTCAGTTG 59.071 40.000 0.00 0.00 0.00 3.16
633 2371 6.102897 AGCTTCAGTAATGTACACTCAGTT 57.897 37.500 0.00 0.00 0.00 3.16
634 2372 5.730296 AGCTTCAGTAATGTACACTCAGT 57.270 39.130 0.00 0.00 0.00 3.41
635 2373 7.166638 CGATTAGCTTCAGTAATGTACACTCAG 59.833 40.741 0.00 0.00 0.00 3.35
636 2374 6.972901 CGATTAGCTTCAGTAATGTACACTCA 59.027 38.462 0.00 0.00 0.00 3.41
637 2375 7.166142 GTCGATTAGCTTCAGTAATGTACACTC 59.834 40.741 0.00 0.00 0.00 3.51
638 2376 6.973474 GTCGATTAGCTTCAGTAATGTACACT 59.027 38.462 0.00 0.00 0.00 3.55
639 2377 6.750501 TGTCGATTAGCTTCAGTAATGTACAC 59.249 38.462 0.00 0.00 0.00 2.90
640 2378 6.750501 GTGTCGATTAGCTTCAGTAATGTACA 59.249 38.462 0.00 0.00 0.00 2.90
641 2379 6.973474 AGTGTCGATTAGCTTCAGTAATGTAC 59.027 38.462 0.00 0.00 0.00 2.90
642 2380 6.972901 CAGTGTCGATTAGCTTCAGTAATGTA 59.027 38.462 0.00 0.00 0.00 2.29
643 2381 5.807520 CAGTGTCGATTAGCTTCAGTAATGT 59.192 40.000 0.00 0.00 0.00 2.71
644 2382 5.276584 GCAGTGTCGATTAGCTTCAGTAATG 60.277 44.000 0.00 0.00 0.00 1.90
645 2383 4.806247 GCAGTGTCGATTAGCTTCAGTAAT 59.194 41.667 0.00 0.00 0.00 1.89
646 2384 4.174009 GCAGTGTCGATTAGCTTCAGTAA 58.826 43.478 0.00 0.00 0.00 2.24
647 2385 3.192633 TGCAGTGTCGATTAGCTTCAGTA 59.807 43.478 0.00 0.00 0.00 2.74
648 2386 2.029020 TGCAGTGTCGATTAGCTTCAGT 60.029 45.455 0.00 0.00 0.00 3.41
649 2387 2.346847 GTGCAGTGTCGATTAGCTTCAG 59.653 50.000 0.00 0.00 0.00 3.02
650 2388 2.029020 AGTGCAGTGTCGATTAGCTTCA 60.029 45.455 0.00 0.00 0.00 3.02
651 2389 2.611518 AGTGCAGTGTCGATTAGCTTC 58.388 47.619 0.00 0.00 0.00 3.86
652 2390 2.751166 AGTGCAGTGTCGATTAGCTT 57.249 45.000 0.00 0.00 0.00 3.74
653 2391 5.515797 TTATAGTGCAGTGTCGATTAGCT 57.484 39.130 3.69 0.00 0.00 3.32
654 2392 6.201044 ACATTTATAGTGCAGTGTCGATTAGC 59.799 38.462 3.69 0.00 0.00 3.09
655 2393 7.700322 ACATTTATAGTGCAGTGTCGATTAG 57.300 36.000 3.69 0.00 0.00 1.73
656 2394 9.589111 TTTACATTTATAGTGCAGTGTCGATTA 57.411 29.630 3.69 0.00 0.00 1.75
657 2395 8.487313 TTTACATTTATAGTGCAGTGTCGATT 57.513 30.769 3.69 0.00 0.00 3.34
658 2396 8.487313 TTTTACATTTATAGTGCAGTGTCGAT 57.513 30.769 3.69 0.00 0.00 3.59
659 2397 7.892778 TTTTACATTTATAGTGCAGTGTCGA 57.107 32.000 3.69 0.00 0.00 4.20
682 2420 9.716507 GACGCACAATCATATTAACTGTATTTT 57.283 29.630 0.00 0.00 0.00 1.82
683 2421 8.342634 GGACGCACAATCATATTAACTGTATTT 58.657 33.333 0.00 0.00 0.00 1.40
684 2422 7.307160 CGGACGCACAATCATATTAACTGTATT 60.307 37.037 0.00 0.00 0.00 1.89
685 2423 6.145534 CGGACGCACAATCATATTAACTGTAT 59.854 38.462 0.00 0.00 0.00 2.29
686 2424 5.460748 CGGACGCACAATCATATTAACTGTA 59.539 40.000 0.00 0.00 0.00 2.74
687 2425 4.270084 CGGACGCACAATCATATTAACTGT 59.730 41.667 0.00 0.00 0.00 3.55
688 2426 4.318760 CCGGACGCACAATCATATTAACTG 60.319 45.833 0.00 0.00 0.00 3.16
689 2427 3.807622 CCGGACGCACAATCATATTAACT 59.192 43.478 0.00 0.00 0.00 2.24
690 2428 3.558418 ACCGGACGCACAATCATATTAAC 59.442 43.478 9.46 0.00 0.00 2.01
691 2429 3.558006 CACCGGACGCACAATCATATTAA 59.442 43.478 9.46 0.00 0.00 1.40
692 2430 3.127589 CACCGGACGCACAATCATATTA 58.872 45.455 9.46 0.00 0.00 0.98
693 2431 1.939934 CACCGGACGCACAATCATATT 59.060 47.619 9.46 0.00 0.00 1.28
694 2432 1.581934 CACCGGACGCACAATCATAT 58.418 50.000 9.46 0.00 0.00 1.78
695 2433 1.087202 GCACCGGACGCACAATCATA 61.087 55.000 9.46 0.00 0.00 2.15
696 2434 2.398554 GCACCGGACGCACAATCAT 61.399 57.895 9.46 0.00 0.00 2.45
697 2435 3.047280 GCACCGGACGCACAATCA 61.047 61.111 9.46 0.00 0.00 2.57
698 2436 2.742372 AGCACCGGACGCACAATC 60.742 61.111 20.05 0.00 0.00 2.67
699 2437 3.049674 CAGCACCGGACGCACAAT 61.050 61.111 20.05 0.00 0.00 2.71
702 2440 4.980805 TTCCAGCACCGGACGCAC 62.981 66.667 20.05 0.28 33.75 5.34
703 2441 4.980805 GTTCCAGCACCGGACGCA 62.981 66.667 20.05 0.02 33.75 5.24
704 2442 2.845752 TATGTTCCAGCACCGGACGC 62.846 60.000 9.46 11.02 33.75 5.19
705 2443 0.390603 TTATGTTCCAGCACCGGACG 60.391 55.000 9.46 0.00 33.75 4.79
706 2444 1.737793 CTTTATGTTCCAGCACCGGAC 59.262 52.381 9.46 0.00 33.75 4.79
707 2445 1.349688 ACTTTATGTTCCAGCACCGGA 59.650 47.619 9.46 0.00 0.00 5.14
708 2446 1.468520 CACTTTATGTTCCAGCACCGG 59.531 52.381 0.00 0.00 0.00 5.28
709 2447 2.151202 ACACTTTATGTTCCAGCACCG 58.849 47.619 0.00 0.00 38.98 4.94
710 2448 4.324267 ACTACACTTTATGTTCCAGCACC 58.676 43.478 0.00 0.00 43.19 5.01
711 2449 5.120830 CAGACTACACTTTATGTTCCAGCAC 59.879 44.000 0.00 0.00 43.19 4.40
712 2450 5.237815 CAGACTACACTTTATGTTCCAGCA 58.762 41.667 0.00 0.00 43.19 4.41
713 2451 4.631813 CCAGACTACACTTTATGTTCCAGC 59.368 45.833 0.00 0.00 43.19 4.85
714 2452 5.178797 CCCAGACTACACTTTATGTTCCAG 58.821 45.833 0.00 0.00 43.19 3.86
715 2453 4.595781 ACCCAGACTACACTTTATGTTCCA 59.404 41.667 0.00 0.00 43.19 3.53
716 2454 5.161943 ACCCAGACTACACTTTATGTTCC 57.838 43.478 0.00 0.00 43.19 3.62
717 2455 6.932947 ACTACCCAGACTACACTTTATGTTC 58.067 40.000 0.00 0.00 43.19 3.18
718 2456 6.930068 ACTACCCAGACTACACTTTATGTT 57.070 37.500 0.00 0.00 43.19 2.71
719 2457 6.698380 CAACTACCCAGACTACACTTTATGT 58.302 40.000 0.00 0.00 46.06 2.29
720 2458 5.581085 GCAACTACCCAGACTACACTTTATG 59.419 44.000 0.00 0.00 0.00 1.90
721 2459 5.484290 AGCAACTACCCAGACTACACTTTAT 59.516 40.000 0.00 0.00 0.00 1.40
722 2460 4.836736 AGCAACTACCCAGACTACACTTTA 59.163 41.667 0.00 0.00 0.00 1.85
723 2461 3.646637 AGCAACTACCCAGACTACACTTT 59.353 43.478 0.00 0.00 0.00 2.66
724 2462 3.006967 CAGCAACTACCCAGACTACACTT 59.993 47.826 0.00 0.00 0.00 3.16
725 2463 2.563179 CAGCAACTACCCAGACTACACT 59.437 50.000 0.00 0.00 0.00 3.55
726 2464 2.353803 CCAGCAACTACCCAGACTACAC 60.354 54.545 0.00 0.00 0.00 2.90
727 2465 1.899814 CCAGCAACTACCCAGACTACA 59.100 52.381 0.00 0.00 0.00 2.74
728 2466 2.166664 CTCCAGCAACTACCCAGACTAC 59.833 54.545 0.00 0.00 0.00 2.73
729 2467 2.225293 ACTCCAGCAACTACCCAGACTA 60.225 50.000 0.00 0.00 0.00 2.59
730 2468 1.270907 CTCCAGCAACTACCCAGACT 58.729 55.000 0.00 0.00 0.00 3.24
731 2469 0.977395 ACTCCAGCAACTACCCAGAC 59.023 55.000 0.00 0.00 0.00 3.51
732 2470 2.615986 TACTCCAGCAACTACCCAGA 57.384 50.000 0.00 0.00 0.00 3.86
733 2471 5.353394 TTTATACTCCAGCAACTACCCAG 57.647 43.478 0.00 0.00 0.00 4.45
734 2472 5.968676 ATTTATACTCCAGCAACTACCCA 57.031 39.130 0.00 0.00 0.00 4.51
735 2473 5.531287 CCAATTTATACTCCAGCAACTACCC 59.469 44.000 0.00 0.00 0.00 3.69
736 2474 6.120220 ACCAATTTATACTCCAGCAACTACC 58.880 40.000 0.00 0.00 0.00 3.18
737 2475 7.335924 TCAACCAATTTATACTCCAGCAACTAC 59.664 37.037 0.00 0.00 0.00 2.73
738 2476 7.398829 TCAACCAATTTATACTCCAGCAACTA 58.601 34.615 0.00 0.00 0.00 2.24
739 2477 6.245408 TCAACCAATTTATACTCCAGCAACT 58.755 36.000 0.00 0.00 0.00 3.16
740 2478 6.509418 TCAACCAATTTATACTCCAGCAAC 57.491 37.500 0.00 0.00 0.00 4.17
741 2479 8.995027 ATATCAACCAATTTATACTCCAGCAA 57.005 30.769 0.00 0.00 0.00 3.91
801 2539 3.467803 AGCAGAGTTTGTTGTGGAGTAC 58.532 45.455 0.00 0.00 0.00 2.73
803 2541 2.717639 AGCAGAGTTTGTTGTGGAGT 57.282 45.000 0.00 0.00 0.00 3.85
844 2582 2.015456 TTCTCCAAGACAGAGCCAGA 57.985 50.000 0.00 0.00 0.00 3.86
869 2608 6.923199 AAACATCACAATCTTCCTCCATTT 57.077 33.333 0.00 0.00 0.00 2.32
870 2609 6.694447 CAAAACATCACAATCTTCCTCCATT 58.306 36.000 0.00 0.00 0.00 3.16
872 2611 4.022068 GCAAAACATCACAATCTTCCTCCA 60.022 41.667 0.00 0.00 0.00 3.86
877 2616 4.554973 GCTACGCAAAACATCACAATCTTC 59.445 41.667 0.00 0.00 0.00 2.87
886 2625 3.871594 ACATCTAGGCTACGCAAAACATC 59.128 43.478 0.00 0.00 0.00 3.06
912 2651 6.410540 TGGGTTAAATTATGAAATGCCAACC 58.589 36.000 0.00 0.00 33.91 3.77
938 2677 2.531206 GTGAGAAGATTCGAACCCGAG 58.469 52.381 0.00 0.00 46.39 4.63
951 3320 9.137459 TGTCTTATTCTTATAGGAGGTGAGAAG 57.863 37.037 0.00 0.00 30.72 2.85
958 3327 5.485708 CCCCCTGTCTTATTCTTATAGGAGG 59.514 48.000 0.00 0.00 0.00 4.30
961 3330 6.085416 ACTCCCCCTGTCTTATTCTTATAGG 58.915 44.000 0.00 0.00 0.00 2.57
982 3351 5.941555 TTTTTGAGAGAGAGGGGATACTC 57.058 43.478 0.00 0.00 37.77 2.59
1026 3833 8.655651 AAAACAGTCACTTTGTTTCTCAAAAA 57.344 26.923 4.09 0.00 45.28 1.94
1029 3836 7.214467 AGAAAACAGTCACTTTGTTTCTCAA 57.786 32.000 4.09 0.00 45.28 3.02
1030 3837 6.817765 AGAAAACAGTCACTTTGTTTCTCA 57.182 33.333 4.09 0.00 45.28 3.27
1033 3840 6.799925 TCGAAAGAAAACAGTCACTTTGTTTC 59.200 34.615 4.09 8.03 45.28 2.78
1035 3842 6.148811 TCTCGAAAGAAAACAGTCACTTTGTT 59.851 34.615 0.00 0.00 41.32 2.83
1037 3844 6.106877 TCTCGAAAGAAAACAGTCACTTTG 57.893 37.500 0.00 0.00 41.32 2.77
1040 3847 6.201806 CAGATTCTCGAAAGAAAACAGTCACT 59.798 38.462 0.00 0.00 44.49 3.41
1041 3848 6.358762 CAGATTCTCGAAAGAAAACAGTCAC 58.641 40.000 0.00 0.00 44.49 3.67
1045 3854 5.604010 AGCAGATTCTCGAAAGAAAACAG 57.396 39.130 0.00 0.00 44.49 3.16
1056 3865 6.473397 ACTCTTGTAAAAAGCAGATTCTCG 57.527 37.500 0.00 0.00 0.00 4.04
1065 3874 7.908601 TCTCGAAAGAAAACTCTTGTAAAAAGC 59.091 33.333 0.00 0.00 41.32 3.51
1066 3875 9.769093 TTCTCGAAAGAAAACTCTTGTAAAAAG 57.231 29.630 0.00 0.00 38.58 2.27
1073 3882 7.634522 ACTTGATTCTCGAAAGAAAACTCTTG 58.365 34.615 0.93 0.00 44.49 3.02
1089 3898 5.590663 TCGCTATCAGTCAGTACTTGATTCT 59.409 40.000 12.57 0.00 38.29 2.40
1105 3914 2.687935 GGAAAAGGGCATTTCGCTATCA 59.312 45.455 0.00 0.00 39.64 2.15
1106 3915 2.952310 AGGAAAAGGGCATTTCGCTATC 59.048 45.455 0.00 0.00 39.64 2.08
1107 3916 3.018423 AGGAAAAGGGCATTTCGCTAT 57.982 42.857 0.00 0.00 39.64 2.97
1108 3917 2.507407 AGGAAAAGGGCATTTCGCTA 57.493 45.000 0.00 0.00 39.64 4.26
1109 3918 1.632589 AAGGAAAAGGGCATTTCGCT 58.367 45.000 0.00 0.00 39.64 4.93
1110 3919 2.029020 AGAAAGGAAAAGGGCATTTCGC 60.029 45.455 0.00 0.00 40.00 4.70
1111 3920 3.670627 CGAGAAAGGAAAAGGGCATTTCG 60.671 47.826 0.00 0.00 40.00 3.46
1119 3928 4.022849 AGCACATTTCGAGAAAGGAAAAGG 60.023 41.667 15.73 3.00 37.00 3.11
1130 3939 2.159517 GGCCTTGTTAGCACATTTCGAG 60.160 50.000 0.00 0.00 31.06 4.04
1174 3983 6.183360 CGAGATGAATACAGGAAGTAGGACAA 60.183 42.308 0.00 0.00 35.85 3.18
1175 3984 5.299531 CGAGATGAATACAGGAAGTAGGACA 59.700 44.000 0.00 0.00 35.85 4.02
1189 3998 1.300931 GCCGGCAGCGAGATGAATA 60.301 57.895 24.80 0.00 0.00 1.75
1364 4818 0.032678 CCGCTAATCTGCAGATCGGT 59.967 55.000 32.10 20.82 35.79 4.69
1429 4886 2.681706 GATCGTTGGATCGCTCATGAT 58.318 47.619 0.00 0.00 39.72 2.45
1921 5566 6.823286 TCCTATAATCATGTCCACCTTTGA 57.177 37.500 0.00 0.00 0.00 2.69
1923 5568 6.270000 TCGATCCTATAATCATGTCCACCTTT 59.730 38.462 0.00 0.00 0.00 3.11
1924 5569 5.780282 TCGATCCTATAATCATGTCCACCTT 59.220 40.000 0.00 0.00 0.00 3.50
2362 6048 4.099573 ACCTCAGTCCTATGGTTACGAATG 59.900 45.833 0.00 0.00 0.00 2.67
2384 6070 0.955919 CAAGCTCTTGGAACCCCGAC 60.956 60.000 1.79 0.00 36.95 4.79
2408 6103 7.230466 AGAATCCACGTCGTATGAAAATAAC 57.770 36.000 0.00 0.00 0.00 1.89
2472 6167 2.561478 TATGAAAGATAAGCCCGCCC 57.439 50.000 0.00 0.00 0.00 6.13
2612 6309 3.763057 ACAAAGGTCTACCCAAATCACC 58.237 45.455 0.00 0.00 36.42 4.02
2627 6324 4.389374 ACATGAGTCCACACTTACAAAGG 58.611 43.478 0.00 0.00 30.63 3.11
2632 6329 4.219944 TCTGGTACATGAGTCCACACTTAC 59.780 45.833 0.00 0.00 38.20 2.34
2691 6401 8.700973 TGCTAACATATATGACCAAACAGAGTA 58.299 33.333 19.63 0.54 0.00 2.59
2841 6565 3.190535 ACCTATAGCGCACCAAAAAGTTG 59.809 43.478 11.47 0.00 34.25 3.16
2842 6566 3.418047 ACCTATAGCGCACCAAAAAGTT 58.582 40.909 11.47 0.00 0.00 2.66
2843 6567 3.067684 ACCTATAGCGCACCAAAAAGT 57.932 42.857 11.47 0.00 0.00 2.66
2844 6568 5.751243 ATAACCTATAGCGCACCAAAAAG 57.249 39.130 11.47 0.00 0.00 2.27
2850 6574 4.004196 AGGAAATAACCTATAGCGCACC 57.996 45.455 11.47 0.00 38.65 5.01
2872 6596 6.680540 AGGGTAGAGCTAGAGGTTAATAACA 58.319 40.000 5.45 0.00 0.00 2.41
2873 6597 8.162746 TCTAGGGTAGAGCTAGAGGTTAATAAC 58.837 40.741 0.00 0.00 0.00 1.89
2912 6636 1.217916 TCCAGGTTCACCCAAACAGA 58.782 50.000 0.00 0.00 36.42 3.41
2924 6648 0.395586 TGCAACAGCACTTCCAGGTT 60.396 50.000 0.00 0.00 32.31 3.50
2951 6675 1.399727 CCGAATGACAAACAGAACGCC 60.400 52.381 0.00 0.00 0.00 5.68
2954 6678 4.813296 AAGACCGAATGACAAACAGAAC 57.187 40.909 0.00 0.00 0.00 3.01
2956 6680 4.196193 ACAAAGACCGAATGACAAACAGA 58.804 39.130 0.00 0.00 0.00 3.41
2957 6681 4.552166 ACAAAGACCGAATGACAAACAG 57.448 40.909 0.00 0.00 0.00 3.16
2958 6682 4.974368 AACAAAGACCGAATGACAAACA 57.026 36.364 0.00 0.00 0.00 2.83
2959 6683 6.641176 AAAAACAAAGACCGAATGACAAAC 57.359 33.333 0.00 0.00 0.00 2.93
3005 6729 2.969300 TTCTCCCGTTGCAACCCACC 62.969 60.000 23.42 0.00 0.00 4.61
3009 6733 3.926821 TTATTTTCTCCCGTTGCAACC 57.073 42.857 23.42 6.48 0.00 3.77
3116 6847 1.972872 CAGTGGCTGGACTGTTCTTT 58.027 50.000 0.00 0.00 38.88 2.52
3162 6893 2.388610 AAAGTGGGGTCCGGTTGGT 61.389 57.895 0.00 0.00 36.30 3.67
3236 6967 1.271379 CCAAAGGAAGGGAGCGAAGAA 60.271 52.381 0.00 0.00 0.00 2.52
3258 6989 4.862574 GGAAGCGAAAATGAATTAACCCAC 59.137 41.667 0.00 0.00 0.00 4.61
3356 7087 9.725019 GATACAATCCAACCAGTTCATCATATA 57.275 33.333 0.00 0.00 0.00 0.86
3403 8823 7.051000 AGACAATAAGCTTCAGGATAAGAACC 58.949 38.462 0.00 0.00 0.00 3.62
3514 8938 3.609175 CGACCGAATTTTGACTTGCACAT 60.609 43.478 0.00 0.00 0.00 3.21
3532 8956 6.509677 CGACCAGATAAATTTAAAGAGCGACC 60.510 42.308 1.21 0.00 0.00 4.79
3659 9084 6.990341 TGTACACTACACACACGACTATAT 57.010 37.500 0.00 0.00 32.89 0.86
3841 10029 7.013274 GCAGGCCATATATTCAACAAAACTCTA 59.987 37.037 5.01 0.00 0.00 2.43
3880 10068 9.787435 TGGTAGCTCTAGAAACAAATTTTCTTA 57.213 29.630 4.67 0.00 39.30 2.10
3888 10076 6.360370 AGTCATGGTAGCTCTAGAAACAAA 57.640 37.500 0.00 0.00 0.00 2.83
3893 10083 9.588096 TGATTATTAGTCATGGTAGCTCTAGAA 57.412 33.333 0.00 0.00 0.00 2.10
3894 10084 9.760926 ATGATTATTAGTCATGGTAGCTCTAGA 57.239 33.333 0.00 0.00 35.12 2.43
3915 10105 9.178758 GGACTAAGGATGAAACAAGTTATGATT 57.821 33.333 0.00 0.00 0.00 2.57
3916 10106 8.328758 TGGACTAAGGATGAAACAAGTTATGAT 58.671 33.333 0.00 0.00 0.00 2.45
3918 10108 7.414540 GCTGGACTAAGGATGAAACAAGTTATG 60.415 40.741 0.00 0.00 0.00 1.90
3919 10109 6.599638 GCTGGACTAAGGATGAAACAAGTTAT 59.400 38.462 0.00 0.00 0.00 1.89
3920 10110 5.938125 GCTGGACTAAGGATGAAACAAGTTA 59.062 40.000 0.00 0.00 0.00 2.24
3921 10111 4.762251 GCTGGACTAAGGATGAAACAAGTT 59.238 41.667 0.00 0.00 0.00 2.66
3923 10113 4.583871 AGCTGGACTAAGGATGAAACAAG 58.416 43.478 0.00 0.00 0.00 3.16
3925 10115 4.640771 AAGCTGGACTAAGGATGAAACA 57.359 40.909 0.00 0.00 0.00 2.83
3926 10116 5.938125 TGTAAAGCTGGACTAAGGATGAAAC 59.062 40.000 0.00 0.00 0.00 2.78
3927 10117 6.121776 TGTAAAGCTGGACTAAGGATGAAA 57.878 37.500 0.00 0.00 0.00 2.69
3928 10118 5.755409 TGTAAAGCTGGACTAAGGATGAA 57.245 39.130 0.00 0.00 0.00 2.57
3929 10119 5.755409 TTGTAAAGCTGGACTAAGGATGA 57.245 39.130 0.00 0.00 0.00 2.92
3963 10192 5.577100 TGGTAGCTCTAGGAACAACTAGAA 58.423 41.667 0.00 0.00 46.33 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.