Multiple sequence alignment - TraesCS3B01G491700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G491700 chr3B 100.000 3818 0 0 1 3818 737923269 737919452 0.000000e+00 7051
1 TraesCS3B01G491700 chr3B 96.817 597 17 2 3222 3818 737913207 737912613 0.000000e+00 996
2 TraesCS3B01G491700 chr3B 88.933 506 56 0 960 1465 739601821 739601316 3.240000e-175 625
3 TraesCS3B01G491700 chr3B 85.206 534 67 6 931 1463 739662314 739661792 4.340000e-149 538
4 TraesCS3B01G491700 chr3B 84.685 333 48 3 2462 2793 739600088 739599758 2.840000e-86 329
5 TraesCS3B01G491700 chr3B 84.639 332 50 1 2462 2793 739654804 739654474 2.840000e-86 329
6 TraesCS3B01G491700 chr3B 85.443 316 43 3 2462 2776 739661025 739660712 3.680000e-85 326
7 TraesCS3B01G491700 chr3B 87.352 253 30 2 2154 2406 739661380 739661130 4.830000e-74 289
8 TraesCS3B01G491700 chr3D 93.392 1029 59 4 516 1543 554836327 554837347 0.000000e+00 1515
9 TraesCS3B01G491700 chr3D 91.619 883 65 5 2136 3013 554837867 554838745 0.000000e+00 1212
10 TraesCS3B01G491700 chr3D 86.827 539 56 7 931 1463 557501062 557500533 4.250000e-164 588
11 TraesCS3B01G491700 chr3D 87.154 506 59 6 960 1465 557525018 557524519 1.540000e-158 569
12 TraesCS3B01G491700 chr3D 93.404 379 22 2 4 381 554835076 554835452 3.330000e-155 558
13 TraesCS3B01G491700 chr3D 85.030 334 45 5 2462 2793 557523477 557523147 6.110000e-88 335
14 TraesCS3B01G491700 chr3D 84.731 334 46 5 2462 2793 557558962 557558632 2.840000e-86 329
15 TraesCS3B01G491700 chr3D 90.452 199 17 2 1909 2107 554837673 554837869 1.050000e-65 261
16 TraesCS3B01G491700 chr3D 90.000 180 18 0 1286 1465 557560183 557560004 2.290000e-57 233
17 TraesCS3B01G491700 chr3D 92.466 146 8 1 374 516 554836066 554836211 5.000000e-49 206
18 TraesCS3B01G491700 chr3D 94.286 70 4 0 1730 1799 554837362 554837431 1.450000e-19 108
19 TraesCS3B01G491700 chr5B 95.470 596 24 3 3225 3818 403829976 403830570 0.000000e+00 948
20 TraesCS3B01G491700 chr5B 93.048 187 11 2 1544 1729 484894683 484894868 4.860000e-69 272
21 TraesCS3B01G491700 chr5B 86.977 215 26 2 3012 3225 712479641 712479854 1.370000e-59 241
22 TraesCS3B01G491700 chr6B 95.318 598 23 5 3222 3817 51743211 51742617 0.000000e+00 944
23 TraesCS3B01G491700 chr6B 95.447 593 25 2 3227 3818 101073080 101072489 0.000000e+00 944
24 TraesCS3B01G491700 chr2B 95.159 599 24 5 3222 3818 23202345 23202940 0.000000e+00 941
25 TraesCS3B01G491700 chr2B 95.118 594 27 1 3227 3818 2586239 2586832 0.000000e+00 935
26 TraesCS3B01G491700 chr2B 87.963 216 22 4 3013 3225 11670180 11670394 6.330000e-63 252
27 TraesCS3B01G491700 chr2B 87.500 208 24 2 3018 3225 667309536 667309741 4.930000e-59 239
28 TraesCS3B01G491700 chr2B 87.081 209 24 3 3018 3225 63035673 63035467 2.290000e-57 233
29 TraesCS3B01G491700 chr7B 94.949 594 28 2 3226 3818 698395860 698395268 0.000000e+00 929
30 TraesCS3B01G491700 chr7B 94.816 598 26 4 3222 3818 48212662 48213255 0.000000e+00 928
31 TraesCS3B01G491700 chr7B 92.857 182 12 1 1544 1724 460554370 460554551 2.920000e-66 263
32 TraesCS3B01G491700 chr7B 87.619 210 21 5 3018 3225 39316817 39316611 4.930000e-59 239
33 TraesCS3B01G491700 chr7B 86.538 208 27 1 3018 3225 704833760 704833966 1.070000e-55 228
34 TraesCS3B01G491700 chr7B 84.375 224 29 6 3005 3225 634049623 634049843 8.310000e-52 215
35 TraesCS3B01G491700 chr7B 91.753 97 6 2 103 197 538228523 538228427 2.390000e-27 134
36 TraesCS3B01G491700 chr1B 94.816 598 28 3 3222 3818 514809568 514810163 0.000000e+00 929
37 TraesCS3B01G491700 chr1B 90.141 213 19 2 3014 3225 13047976 13048187 3.760000e-70 276
38 TraesCS3B01G491700 chr1B 91.000 100 7 2 100 197 259511836 259511935 2.390000e-27 134
39 TraesCS3B01G491700 chr3A 86.561 506 62 6 960 1465 693338071 693337572 1.550000e-153 553
40 TraesCS3B01G491700 chr3A 85.047 535 72 6 931 1463 693207812 693207284 4.340000e-149 538
41 TraesCS3B01G491700 chr3A 85.928 334 42 5 2462 2793 693336420 693336090 6.070000e-93 351
42 TraesCS3B01G491700 chrUn 87.076 472 55 6 960 1431 45144514 45144049 2.610000e-146 529
43 TraesCS3B01G491700 chrUn 85.030 334 45 5 2462 2793 252805954 252805624 6.110000e-88 335
44 TraesCS3B01G491700 chr2A 94.413 179 10 0 1546 1724 47360715 47360537 3.760000e-70 276
45 TraesCS3B01G491700 chr2A 93.443 183 11 1 1544 1725 12284474 12284292 1.750000e-68 270
46 TraesCS3B01G491700 chr2A 86.058 208 27 2 3018 3225 762683165 762682960 4.960000e-54 222
47 TraesCS3B01G491700 chr7D 93.407 182 11 1 1544 1724 469981138 469981319 6.290000e-68 268
48 TraesCS3B01G491700 chr5D 92.513 187 12 2 1546 1731 384737090 384736905 2.260000e-67 267
49 TraesCS3B01G491700 chr1D 92.935 184 12 1 1544 1726 323930206 323930389 2.260000e-67 267
50 TraesCS3B01G491700 chr1D 91.667 192 14 2 1546 1736 419022292 419022102 8.130000e-67 265
51 TraesCS3B01G491700 chr1D 87.826 115 11 3 102 213 135931050 135930936 8.610000e-27 132
52 TraesCS3B01G491700 chr1D 90.291 103 7 3 105 204 483907582 483907684 8.610000e-27 132
53 TraesCS3B01G491700 chr7A 91.935 186 13 2 1544 1727 10849481 10849296 3.780000e-65 259
54 TraesCS3B01G491700 chr6A 92.157 102 4 4 100 197 457850365 457850466 1.430000e-29 141
55 TraesCS3B01G491700 chr4D 89.423 104 9 2 96 197 26253943 26254046 3.100000e-26 130
56 TraesCS3B01G491700 chr4A 88.785 107 9 3 94 197 688501028 688501134 1.110000e-25 128
57 TraesCS3B01G491700 chr6D 86.842 114 12 3 103 213 225779220 225779107 1.440000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G491700 chr3B 737919452 737923269 3817 True 7051.000000 7051 100.000000 1 3818 1 chr3B.!!$R2 3817
1 TraesCS3B01G491700 chr3B 737912613 737913207 594 True 996.000000 996 96.817000 3222 3818 1 chr3B.!!$R1 596
2 TraesCS3B01G491700 chr3B 739599758 739601821 2063 True 477.000000 625 86.809000 960 2793 2 chr3B.!!$R4 1833
3 TraesCS3B01G491700 chr3B 739660712 739662314 1602 True 384.333333 538 86.000333 931 2776 3 chr3B.!!$R5 1845
4 TraesCS3B01G491700 chr3D 554835076 554838745 3669 False 643.333333 1515 92.603167 4 3013 6 chr3D.!!$F1 3009
5 TraesCS3B01G491700 chr3D 557500533 557501062 529 True 588.000000 588 86.827000 931 1463 1 chr3D.!!$R1 532
6 TraesCS3B01G491700 chr3D 557523147 557525018 1871 True 452.000000 569 86.092000 960 2793 2 chr3D.!!$R2 1833
7 TraesCS3B01G491700 chr3D 557558632 557560183 1551 True 281.000000 329 87.365500 1286 2793 2 chr3D.!!$R3 1507
8 TraesCS3B01G491700 chr5B 403829976 403830570 594 False 948.000000 948 95.470000 3225 3818 1 chr5B.!!$F1 593
9 TraesCS3B01G491700 chr6B 51742617 51743211 594 True 944.000000 944 95.318000 3222 3817 1 chr6B.!!$R1 595
10 TraesCS3B01G491700 chr6B 101072489 101073080 591 True 944.000000 944 95.447000 3227 3818 1 chr6B.!!$R2 591
11 TraesCS3B01G491700 chr2B 23202345 23202940 595 False 941.000000 941 95.159000 3222 3818 1 chr2B.!!$F3 596
12 TraesCS3B01G491700 chr2B 2586239 2586832 593 False 935.000000 935 95.118000 3227 3818 1 chr2B.!!$F1 591
13 TraesCS3B01G491700 chr7B 698395268 698395860 592 True 929.000000 929 94.949000 3226 3818 1 chr7B.!!$R3 592
14 TraesCS3B01G491700 chr7B 48212662 48213255 593 False 928.000000 928 94.816000 3222 3818 1 chr7B.!!$F1 596
15 TraesCS3B01G491700 chr1B 514809568 514810163 595 False 929.000000 929 94.816000 3222 3818 1 chr1B.!!$F3 596
16 TraesCS3B01G491700 chr3A 693207284 693207812 528 True 538.000000 538 85.047000 931 1463 1 chr3A.!!$R1 532
17 TraesCS3B01G491700 chr3A 693336090 693338071 1981 True 452.000000 553 86.244500 960 2793 2 chr3A.!!$R2 1833

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
761 1504 0.098728 CCATCAATCAAACGCCCGTC 59.901 55.0 0.0 0.0 0.0 4.79 F
1586 2547 0.251653 AGACCCGACTGAGGCAAGTA 60.252 55.0 0.0 0.0 0.0 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1609 2570 0.036294 GCTCCCTCAAGCCTAAACGT 60.036 55.0 0.00 0.0 36.22 3.99 R
3158 4963 0.034863 GGAACAAAGGGGCCATACGA 60.035 55.0 4.39 0.0 0.00 3.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
113 114 4.038402 ACGATTTAGTGTTATACTCCCCCG 59.962 45.833 0.00 0.00 40.89 5.73
138 140 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
199 201 6.603201 CACTTATTTTAAGATGGAGGGAGCAA 59.397 38.462 1.47 0.00 0.00 3.91
343 345 3.678056 GACATGAACCTACTGTGTCCA 57.322 47.619 0.00 0.00 34.58 4.02
345 347 3.997021 GACATGAACCTACTGTGTCCAAG 59.003 47.826 0.00 0.00 34.58 3.61
364 366 5.771666 TCCAAGAAATTGCTTCAGTTCATCT 59.228 36.000 0.00 0.00 36.40 2.90
425 1048 3.934457 AAAAAGGTTCGGCATAACTGG 57.066 42.857 1.09 0.00 0.00 4.00
430 1053 1.153449 TTCGGCATAACTGGAGCGG 60.153 57.895 0.00 0.00 0.00 5.52
449 1072 5.497474 AGCGGACTTAAATATGTTTGGACT 58.503 37.500 0.00 0.00 0.00 3.85
464 1087 3.334583 TGGACTGCACTTATCAACTCC 57.665 47.619 0.00 0.00 0.00 3.85
541 1283 3.006967 AGCTATCTTTGTTGACACTCGGT 59.993 43.478 0.00 0.00 0.00 4.69
554 1296 6.630444 TGACACTCGGTAGATATTAGTTCC 57.370 41.667 0.00 0.00 0.00 3.62
565 1307 5.625150 AGATATTAGTTCCCACATCTTGGC 58.375 41.667 0.00 0.00 45.37 4.52
567 1309 3.806949 TTAGTTCCCACATCTTGGCTT 57.193 42.857 0.00 0.00 45.37 4.35
571 1313 3.074538 AGTTCCCACATCTTGGCTTAACT 59.925 43.478 0.00 0.00 45.37 2.24
575 1317 3.441572 CCCACATCTTGGCTTAACTTGAG 59.558 47.826 0.00 0.00 45.37 3.02
576 1318 4.326826 CCACATCTTGGCTTAACTTGAGA 58.673 43.478 0.00 0.00 39.07 3.27
577 1319 4.154918 CCACATCTTGGCTTAACTTGAGAC 59.845 45.833 0.00 0.00 39.07 3.36
578 1320 4.999950 CACATCTTGGCTTAACTTGAGACT 59.000 41.667 0.00 0.00 0.00 3.24
600 1342 6.679843 ACTGAGTAGTTACTTCAGCTTACAC 58.320 40.000 12.45 0.00 36.50 2.90
611 1353 2.432146 TCAGCTTACACATAGCCTCCTG 59.568 50.000 0.00 0.00 39.47 3.86
645 1387 7.859325 TCTCCGTTTCTTTATTGATAAAGGG 57.141 36.000 18.48 13.38 45.73 3.95
646 1388 6.317893 TCTCCGTTTCTTTATTGATAAAGGGC 59.682 38.462 18.48 10.77 45.73 5.19
649 1392 6.094881 CCGTTTCTTTATTGATAAAGGGCTGA 59.905 38.462 18.48 2.38 45.73 4.26
675 1418 0.814410 TTTGCACCGGCGTGTAGAAA 60.814 50.000 6.01 3.55 45.35 2.52
680 1423 2.802057 GCACCGGCGTGTAGAAATAGAT 60.802 50.000 6.01 0.00 42.39 1.98
683 1426 3.004524 ACCGGCGTGTAGAAATAGATCTC 59.995 47.826 6.01 0.00 0.00 2.75
706 1449 2.812011 ACATGCCTCCTCGTTTGTTAAC 59.188 45.455 0.00 0.00 0.00 2.01
708 1451 1.418637 TGCCTCCTCGTTTGTTAACCT 59.581 47.619 2.48 0.00 0.00 3.50
712 1455 3.495453 CCTCCTCGTTTGTTAACCTGGAA 60.495 47.826 0.00 0.00 34.14 3.53
722 1465 7.703197 CGTTTGTTAACCTGGAATTTTAAGTGT 59.297 33.333 0.00 0.00 0.00 3.55
723 1466 9.373603 GTTTGTTAACCTGGAATTTTAAGTGTT 57.626 29.630 0.00 0.00 0.00 3.32
757 1500 1.465689 CGTCACCATCAATCAAACGCC 60.466 52.381 0.00 0.00 0.00 5.68
761 1504 0.098728 CCATCAATCAAACGCCCGTC 59.901 55.000 0.00 0.00 0.00 4.79
765 1508 2.388232 AATCAAACGCCCGTCGCTC 61.388 57.895 0.00 0.00 43.23 5.03
784 1527 2.024414 TCGTCTGCTAGCTATCTTGCA 58.976 47.619 17.23 5.40 46.01 4.08
791 1534 2.869192 GCTAGCTATCTTGCAGGTCAAC 59.131 50.000 7.70 0.00 40.13 3.18
792 1535 3.431486 GCTAGCTATCTTGCAGGTCAACT 60.431 47.826 7.70 0.00 40.13 3.16
826 1569 5.406780 GCAATTTACTACTCGATCCTGGATG 59.593 44.000 15.25 6.84 0.00 3.51
830 1573 6.819397 TTACTACTCGATCCTGGATGTATG 57.181 41.667 15.25 4.16 0.00 2.39
843 1586 5.068198 CCTGGATGTATGATTGTTTCCTTGG 59.932 44.000 0.00 0.00 0.00 3.61
850 1593 2.235891 GATTGTTTCCTTGGAACCCGT 58.764 47.619 0.98 0.00 0.00 5.28
851 1594 1.682740 TTGTTTCCTTGGAACCCGTC 58.317 50.000 0.98 0.00 0.00 4.79
906 1649 3.138205 AGAGACTCTACGCGTCAAATG 57.862 47.619 18.63 5.51 33.89 2.32
911 1654 2.288579 ACTCTACGCGTCAAATGAACCA 60.289 45.455 18.63 0.00 0.00 3.67
919 1662 2.813754 CGTCAAATGAACCACACCAGAT 59.186 45.455 0.00 0.00 0.00 2.90
1046 1795 8.143835 ACAAATTTTACACAAGAAATGGAGAGG 58.856 33.333 0.00 0.00 0.00 3.69
1048 1797 8.655935 AATTTTACACAAGAAATGGAGAGGAT 57.344 30.769 0.00 0.00 0.00 3.24
1086 1835 0.443869 CAGCGTGAGGAACCATTTCG 59.556 55.000 0.00 0.00 31.78 3.46
1483 2442 3.120792 TCTCCGTTGACTCAAACTTTCG 58.879 45.455 0.00 0.00 0.00 3.46
1512 2473 0.741915 TCACTGCCGTGTATATGCGA 59.258 50.000 8.20 0.00 41.89 5.10
1513 2474 1.135333 TCACTGCCGTGTATATGCGAA 59.865 47.619 8.20 0.00 41.89 4.70
1543 2504 9.593134 AAATAGAGAAGACTTATCACATCACAC 57.407 33.333 12.17 0.00 0.00 3.82
1544 2505 6.596309 AGAGAAGACTTATCACATCACACA 57.404 37.500 12.17 0.00 0.00 3.72
1545 2506 6.629128 AGAGAAGACTTATCACATCACACAG 58.371 40.000 12.17 0.00 0.00 3.66
1546 2507 6.435591 AGAGAAGACTTATCACATCACACAGA 59.564 38.462 12.17 0.00 0.00 3.41
1547 2508 6.629128 AGAAGACTTATCACATCACACAGAG 58.371 40.000 0.00 0.00 0.00 3.35
1548 2509 4.753233 AGACTTATCACATCACACAGAGC 58.247 43.478 0.00 0.00 0.00 4.09
1549 2510 3.866651 ACTTATCACATCACACAGAGCC 58.133 45.455 0.00 0.00 0.00 4.70
1550 2511 3.261643 ACTTATCACATCACACAGAGCCA 59.738 43.478 0.00 0.00 0.00 4.75
1551 2512 2.865119 ATCACATCACACAGAGCCAA 57.135 45.000 0.00 0.00 0.00 4.52
1552 2513 2.174363 TCACATCACACAGAGCCAAG 57.826 50.000 0.00 0.00 0.00 3.61
1553 2514 1.693606 TCACATCACACAGAGCCAAGA 59.306 47.619 0.00 0.00 0.00 3.02
1554 2515 2.074576 CACATCACACAGAGCCAAGAG 58.925 52.381 0.00 0.00 0.00 2.85
1555 2516 1.002888 ACATCACACAGAGCCAAGAGG 59.997 52.381 0.00 0.00 38.23 3.69
1556 2517 1.002888 CATCACACAGAGCCAAGAGGT 59.997 52.381 0.00 0.00 37.19 3.85
1557 2518 0.681733 TCACACAGAGCCAAGAGGTC 59.318 55.000 0.00 0.00 43.67 3.85
1577 2538 2.526304 TTGAGTTCAAGACCCGACTG 57.474 50.000 0.00 0.00 0.00 3.51
1578 2539 1.699730 TGAGTTCAAGACCCGACTGA 58.300 50.000 0.00 0.00 0.00 3.41
1579 2540 1.613925 TGAGTTCAAGACCCGACTGAG 59.386 52.381 0.00 0.00 0.00 3.35
1580 2541 0.969894 AGTTCAAGACCCGACTGAGG 59.030 55.000 0.00 0.00 0.00 3.86
1581 2542 0.670854 GTTCAAGACCCGACTGAGGC 60.671 60.000 0.00 0.00 0.00 4.70
1582 2543 1.118965 TTCAAGACCCGACTGAGGCA 61.119 55.000 0.00 0.00 0.00 4.75
1583 2544 1.118965 TCAAGACCCGACTGAGGCAA 61.119 55.000 0.00 0.00 0.00 4.52
1584 2545 0.671781 CAAGACCCGACTGAGGCAAG 60.672 60.000 0.00 0.00 0.00 4.01
1585 2546 1.122019 AAGACCCGACTGAGGCAAGT 61.122 55.000 0.00 0.00 0.00 3.16
1586 2547 0.251653 AGACCCGACTGAGGCAAGTA 60.252 55.000 0.00 0.00 0.00 2.24
1587 2548 0.606604 GACCCGACTGAGGCAAGTAA 59.393 55.000 0.00 0.00 0.00 2.24
1588 2549 1.001633 GACCCGACTGAGGCAAGTAAA 59.998 52.381 0.00 0.00 0.00 2.01
1589 2550 1.628846 ACCCGACTGAGGCAAGTAAAT 59.371 47.619 0.00 0.00 0.00 1.40
1590 2551 2.039879 ACCCGACTGAGGCAAGTAAATT 59.960 45.455 0.00 0.00 0.00 1.82
1591 2552 2.420022 CCCGACTGAGGCAAGTAAATTG 59.580 50.000 0.00 0.00 42.20 2.32
1603 2564 5.535043 CAAGTAAATTGCAGCCCATTTTC 57.465 39.130 5.24 1.66 31.54 2.29
1604 2565 4.888326 AGTAAATTGCAGCCCATTTTCA 57.112 36.364 5.24 0.00 31.54 2.69
1605 2566 4.824289 AGTAAATTGCAGCCCATTTTCAG 58.176 39.130 5.24 0.00 31.54 3.02
1606 2567 3.775261 AAATTGCAGCCCATTTTCAGT 57.225 38.095 0.00 0.00 0.00 3.41
1607 2568 3.323751 AATTGCAGCCCATTTTCAGTC 57.676 42.857 0.00 0.00 0.00 3.51
1608 2569 0.968405 TTGCAGCCCATTTTCAGTCC 59.032 50.000 0.00 0.00 0.00 3.85
1609 2570 0.178967 TGCAGCCCATTTTCAGTCCA 60.179 50.000 0.00 0.00 0.00 4.02
1610 2571 0.244721 GCAGCCCATTTTCAGTCCAC 59.755 55.000 0.00 0.00 0.00 4.02
1611 2572 0.523072 CAGCCCATTTTCAGTCCACG 59.477 55.000 0.00 0.00 0.00 4.94
1612 2573 0.110486 AGCCCATTTTCAGTCCACGT 59.890 50.000 0.00 0.00 0.00 4.49
1613 2574 0.958822 GCCCATTTTCAGTCCACGTT 59.041 50.000 0.00 0.00 0.00 3.99
1614 2575 1.339929 GCCCATTTTCAGTCCACGTTT 59.660 47.619 0.00 0.00 0.00 3.60
1615 2576 2.554893 GCCCATTTTCAGTCCACGTTTA 59.445 45.455 0.00 0.00 0.00 2.01
1616 2577 3.365969 GCCCATTTTCAGTCCACGTTTAG 60.366 47.826 0.00 0.00 0.00 1.85
1617 2578 3.190535 CCCATTTTCAGTCCACGTTTAGG 59.809 47.826 0.00 0.00 0.00 2.69
1618 2579 3.365969 CCATTTTCAGTCCACGTTTAGGC 60.366 47.826 0.00 0.00 0.00 3.93
1619 2580 2.922740 TTTCAGTCCACGTTTAGGCT 57.077 45.000 0.00 0.00 0.00 4.58
1620 2581 2.922740 TTCAGTCCACGTTTAGGCTT 57.077 45.000 0.00 0.00 0.00 4.35
1621 2582 2.163818 TCAGTCCACGTTTAGGCTTG 57.836 50.000 0.00 0.00 0.00 4.01
1622 2583 1.689813 TCAGTCCACGTTTAGGCTTGA 59.310 47.619 0.00 0.00 0.00 3.02
1623 2584 2.069273 CAGTCCACGTTTAGGCTTGAG 58.931 52.381 0.00 0.00 0.00 3.02
1624 2585 1.002087 AGTCCACGTTTAGGCTTGAGG 59.998 52.381 0.00 0.00 0.00 3.86
1625 2586 0.323629 TCCACGTTTAGGCTTGAGGG 59.676 55.000 0.00 0.00 0.00 4.30
1626 2587 0.323629 CCACGTTTAGGCTTGAGGGA 59.676 55.000 0.00 0.00 0.00 4.20
1627 2588 1.676014 CCACGTTTAGGCTTGAGGGAG 60.676 57.143 0.00 0.00 0.00 4.30
1628 2589 0.036294 ACGTTTAGGCTTGAGGGAGC 60.036 55.000 0.00 0.00 41.96 4.70
1634 2595 2.743928 GCTTGAGGGAGCCACACG 60.744 66.667 0.00 0.00 36.66 4.49
1635 2596 2.743718 CTTGAGGGAGCCACACGT 59.256 61.111 0.00 0.00 0.00 4.49
1636 2597 1.669115 CTTGAGGGAGCCACACGTG 60.669 63.158 15.48 15.48 0.00 4.49
1637 2598 2.099652 CTTGAGGGAGCCACACGTGA 62.100 60.000 25.01 0.00 0.00 4.35
1638 2599 2.099652 TTGAGGGAGCCACACGTGAG 62.100 60.000 25.01 15.20 0.00 3.51
1639 2600 3.302347 GAGGGAGCCACACGTGAGG 62.302 68.421 25.64 25.64 0.00 3.86
1640 2601 4.394712 GGGAGCCACACGTGAGGG 62.395 72.222 29.55 25.23 43.28 4.30
1641 2602 4.394712 GGAGCCACACGTGAGGGG 62.395 72.222 29.55 23.01 40.46 4.79
1642 2603 3.311110 GAGCCACACGTGAGGGGA 61.311 66.667 29.55 0.00 40.46 4.81
1643 2604 2.847234 AGCCACACGTGAGGGGAA 60.847 61.111 29.55 0.00 40.46 3.97
1644 2605 2.185310 GAGCCACACGTGAGGGGAAT 62.185 60.000 29.55 15.82 40.46 3.01
1645 2606 2.040544 GCCACACGTGAGGGGAATG 61.041 63.158 29.55 12.86 40.46 2.67
1646 2607 1.374947 CCACACGTGAGGGGAATGT 59.625 57.895 25.01 0.00 40.46 2.71
1647 2608 0.250727 CCACACGTGAGGGGAATGTT 60.251 55.000 25.01 0.00 40.46 2.71
1648 2609 0.874390 CACACGTGAGGGGAATGTTG 59.126 55.000 25.01 1.34 40.46 3.33
1649 2610 0.762418 ACACGTGAGGGGAATGTTGA 59.238 50.000 25.01 0.00 40.46 3.18
1650 2611 1.156736 CACGTGAGGGGAATGTTGAC 58.843 55.000 10.90 0.00 0.00 3.18
1651 2612 0.320421 ACGTGAGGGGAATGTTGACG 60.320 55.000 0.00 0.00 0.00 4.35
1652 2613 0.320421 CGTGAGGGGAATGTTGACGT 60.320 55.000 0.00 0.00 0.00 4.34
1653 2614 1.067425 CGTGAGGGGAATGTTGACGTA 60.067 52.381 0.00 0.00 0.00 3.57
1654 2615 2.418197 CGTGAGGGGAATGTTGACGTAT 60.418 50.000 0.00 0.00 0.00 3.06
1655 2616 3.181484 CGTGAGGGGAATGTTGACGTATA 60.181 47.826 0.00 0.00 0.00 1.47
1656 2617 4.678574 CGTGAGGGGAATGTTGACGTATAA 60.679 45.833 0.00 0.00 0.00 0.98
1657 2618 5.365619 GTGAGGGGAATGTTGACGTATAAT 58.634 41.667 0.00 0.00 0.00 1.28
1658 2619 5.236478 GTGAGGGGAATGTTGACGTATAATG 59.764 44.000 0.00 0.00 0.00 1.90
1659 2620 5.104693 TGAGGGGAATGTTGACGTATAATGT 60.105 40.000 0.00 0.00 0.00 2.71
1660 2621 5.123227 AGGGGAATGTTGACGTATAATGTG 58.877 41.667 0.00 0.00 0.00 3.21
1661 2622 4.261031 GGGGAATGTTGACGTATAATGTGC 60.261 45.833 0.00 0.00 0.00 4.57
1662 2623 4.334203 GGGAATGTTGACGTATAATGTGCA 59.666 41.667 0.00 0.00 0.00 4.57
1663 2624 5.501715 GGAATGTTGACGTATAATGTGCAG 58.498 41.667 0.00 0.00 0.00 4.41
1664 2625 4.536364 ATGTTGACGTATAATGTGCAGC 57.464 40.909 0.00 0.00 0.00 5.25
1665 2626 2.675844 TGTTGACGTATAATGTGCAGCC 59.324 45.455 0.00 0.00 0.00 4.85
1666 2627 2.936498 GTTGACGTATAATGTGCAGCCT 59.064 45.455 0.00 0.00 0.00 4.58
1667 2628 4.116961 GTTGACGTATAATGTGCAGCCTA 58.883 43.478 0.00 0.00 0.00 3.93
1668 2629 3.977427 TGACGTATAATGTGCAGCCTAG 58.023 45.455 0.00 0.00 0.00 3.02
1669 2630 3.383505 TGACGTATAATGTGCAGCCTAGT 59.616 43.478 0.00 0.00 0.00 2.57
1670 2631 3.978687 ACGTATAATGTGCAGCCTAGTC 58.021 45.455 0.00 0.00 0.00 2.59
1671 2632 3.637229 ACGTATAATGTGCAGCCTAGTCT 59.363 43.478 0.00 0.00 0.00 3.24
1672 2633 4.230657 CGTATAATGTGCAGCCTAGTCTC 58.769 47.826 0.00 0.00 0.00 3.36
1673 2634 4.022762 CGTATAATGTGCAGCCTAGTCTCT 60.023 45.833 0.00 0.00 0.00 3.10
1674 2635 5.508153 CGTATAATGTGCAGCCTAGTCTCTT 60.508 44.000 0.00 0.00 0.00 2.85
1675 2636 2.977772 ATGTGCAGCCTAGTCTCTTC 57.022 50.000 0.00 0.00 0.00 2.87
1676 2637 0.898320 TGTGCAGCCTAGTCTCTTCC 59.102 55.000 0.00 0.00 0.00 3.46
1682 2643 3.295093 CAGCCTAGTCTCTTCCATCAGA 58.705 50.000 0.00 0.00 0.00 3.27
1685 2646 3.057596 GCCTAGTCTCTTCCATCAGATCG 60.058 52.174 0.00 0.00 0.00 3.69
1688 2649 2.955660 AGTCTCTTCCATCAGATCGGTC 59.044 50.000 0.00 0.00 0.00 4.79
1690 2651 3.383185 GTCTCTTCCATCAGATCGGTCTT 59.617 47.826 0.00 0.00 30.42 3.01
1696 2657 3.009033 TCCATCAGATCGGTCTTTTGGTT 59.991 43.478 18.67 0.00 36.21 3.67
1697 2658 3.127548 CCATCAGATCGGTCTTTTGGTTG 59.872 47.826 13.38 1.42 32.74 3.77
1698 2659 2.151202 TCAGATCGGTCTTTTGGTTGC 58.849 47.619 0.00 0.00 30.42 4.17
1701 2662 3.057315 CAGATCGGTCTTTTGGTTGCATT 60.057 43.478 0.00 0.00 30.42 3.56
1711 2672 0.539207 TGGTTGCATTGGCTAGCACA 60.539 50.000 18.24 9.44 45.63 4.57
1713 2674 1.470285 GGTTGCATTGGCTAGCACATG 60.470 52.381 18.24 17.62 41.77 3.21
1715 2676 0.966370 TGCATTGGCTAGCACATGCA 60.966 50.000 33.23 33.23 41.87 3.96
1716 2677 0.526954 GCATTGGCTAGCACATGCAC 60.527 55.000 31.05 13.30 39.46 4.57
1717 2678 1.100510 CATTGGCTAGCACATGCACT 58.899 50.000 18.24 0.00 45.16 4.40
1722 2683 1.936547 GGCTAGCACATGCACTTCTAC 59.063 52.381 18.24 0.00 45.16 2.59
1727 2688 3.480470 AGCACATGCACTTCTACAAGTT 58.520 40.909 6.64 0.00 41.24 2.66
1728 2689 4.641396 AGCACATGCACTTCTACAAGTTA 58.359 39.130 6.64 0.00 41.24 2.24
1801 2770 9.593134 CAATATCTAACATTGTATAGAGGCTCC 57.407 37.037 11.71 0.00 32.05 4.70
1802 2771 6.613153 ATCTAACATTGTATAGAGGCTCCC 57.387 41.667 11.71 0.00 32.05 4.30
1804 2773 6.860034 TCTAACATTGTATAGAGGCTCCCTA 58.140 40.000 11.71 0.00 31.76 3.53
1805 2774 7.302948 TCTAACATTGTATAGAGGCTCCCTAA 58.697 38.462 11.71 0.39 31.76 2.69
1806 2775 6.824958 AACATTGTATAGAGGCTCCCTAAA 57.175 37.500 11.71 0.23 31.76 1.85
1808 2777 7.208064 ACATTGTATAGAGGCTCCCTAAAAA 57.792 36.000 11.71 0.00 31.76 1.94
1835 2804 7.812690 AAATCATTGTATAGAAGCTGCATCA 57.187 32.000 7.68 0.00 0.00 3.07
1836 2805 7.812690 AATCATTGTATAGAAGCTGCATCAA 57.187 32.000 7.68 0.00 0.00 2.57
1837 2806 6.609237 TCATTGTATAGAAGCTGCATCAAC 57.391 37.500 7.68 3.35 0.00 3.18
1838 2807 5.528690 TCATTGTATAGAAGCTGCATCAACC 59.471 40.000 7.68 0.00 0.00 3.77
1839 2808 4.760530 TGTATAGAAGCTGCATCAACCT 57.239 40.909 7.68 0.00 0.00 3.50
1840 2809 5.102953 TGTATAGAAGCTGCATCAACCTT 57.897 39.130 7.68 0.00 0.00 3.50
1841 2810 6.233905 TGTATAGAAGCTGCATCAACCTTA 57.766 37.500 7.68 0.00 0.00 2.69
1842 2811 6.830912 TGTATAGAAGCTGCATCAACCTTAT 58.169 36.000 7.68 0.00 0.00 1.73
1843 2812 7.962441 TGTATAGAAGCTGCATCAACCTTATA 58.038 34.615 7.68 0.00 0.00 0.98
1844 2813 8.597167 TGTATAGAAGCTGCATCAACCTTATAT 58.403 33.333 7.68 0.00 0.00 0.86
1847 2816 7.308450 AGAAGCTGCATCAACCTTATATAGA 57.692 36.000 7.68 0.00 0.00 1.98
1848 2817 7.385267 AGAAGCTGCATCAACCTTATATAGAG 58.615 38.462 7.68 0.00 0.00 2.43
1849 2818 6.047511 AGCTGCATCAACCTTATATAGAGG 57.952 41.667 1.02 8.56 40.24 3.69
1850 2819 4.633565 GCTGCATCAACCTTATATAGAGGC 59.366 45.833 0.00 5.22 37.84 4.70
1851 2820 5.570439 GCTGCATCAACCTTATATAGAGGCT 60.570 44.000 0.00 0.00 37.84 4.58
1852 2821 6.351371 GCTGCATCAACCTTATATAGAGGCTA 60.351 42.308 0.00 0.00 37.84 3.93
1853 2822 6.936279 TGCATCAACCTTATATAGAGGCTAC 58.064 40.000 6.99 0.00 37.84 3.58
1854 2823 6.070767 TGCATCAACCTTATATAGAGGCTACC 60.071 42.308 6.99 0.00 37.84 3.18
1855 2824 6.630638 GCATCAACCTTATATAGAGGCTACCC 60.631 46.154 9.57 0.00 37.84 3.69
1856 2825 5.014858 TCAACCTTATATAGAGGCTACCCG 58.985 45.833 9.57 0.00 37.84 5.28
1857 2826 3.363627 ACCTTATATAGAGGCTACCCGC 58.636 50.000 9.57 0.00 37.84 6.13
1858 2827 3.245514 ACCTTATATAGAGGCTACCCGCA 60.246 47.826 9.57 0.00 41.67 5.69
1859 2828 3.767673 CCTTATATAGAGGCTACCCGCAA 59.232 47.826 0.00 0.00 41.67 4.85
1860 2829 4.222145 CCTTATATAGAGGCTACCCGCAAA 59.778 45.833 0.00 0.00 41.67 3.68
1861 2830 5.279809 CCTTATATAGAGGCTACCCGCAAAA 60.280 44.000 0.00 0.00 41.67 2.44
1862 2831 4.699925 ATATAGAGGCTACCCGCAAAAA 57.300 40.909 0.00 0.00 41.67 1.94
1898 2867 6.831976 AGAGGCTACTTCAATAAATTCCGAT 58.168 36.000 0.00 0.00 0.00 4.18
1899 2868 6.708054 AGAGGCTACTTCAATAAATTCCGATG 59.292 38.462 0.00 0.00 0.00 3.84
1924 3085 7.944000 TGCAAGGGAGCTCAATATTTTATATGA 59.056 33.333 17.19 0.00 34.99 2.15
2044 3577 9.909644 GAAATGAATAGCTATGCATGATTTTCT 57.090 29.630 25.18 7.38 32.28 2.52
2052 3585 8.206325 AGCTATGCATGATTTTCTATTATCCG 57.794 34.615 10.16 0.00 0.00 4.18
2151 3858 4.886247 TTTTGTTGTTGGAAGGAGTACG 57.114 40.909 0.00 0.00 0.00 3.67
2170 3878 5.880332 AGTACGTTATAAACCGTGGTCTCTA 59.120 40.000 10.44 0.00 37.91 2.43
2174 3882 6.095377 CGTTATAAACCGTGGTCTCTAACTT 58.905 40.000 0.00 0.00 0.00 2.66
2176 3884 7.411157 CGTTATAAACCGTGGTCTCTAACTTTG 60.411 40.741 0.00 0.00 0.00 2.77
2244 3952 6.705381 GGGATGTGATTAGTTCATGAGAAGAG 59.295 42.308 0.00 0.00 36.54 2.85
2261 3969 1.411977 AGAGCATCATCGGAAGGACTG 59.588 52.381 0.00 0.00 37.82 3.51
2309 4017 1.218844 ACAACAACCAGGGTGTAGGT 58.781 50.000 11.70 9.92 40.61 3.08
2406 4159 5.424895 ACAGCTTAACATCCTCTTGATCTCT 59.575 40.000 0.00 0.00 0.00 3.10
2536 4338 1.152830 GGTGAGGCCTGGAAACCAA 59.847 57.895 12.00 0.00 30.80 3.67
2582 4384 2.743928 CAGGGCTGCTCACCGAAC 60.744 66.667 0.74 0.00 0.00 3.95
2641 4443 0.403271 AGGCAGATGTTTCCAGCACT 59.597 50.000 0.00 0.00 0.00 4.40
2680 4482 2.224159 GGTGGTTCTGAGCCCTGGA 61.224 63.158 8.14 0.00 0.00 3.86
2772 4574 2.642311 TCCTGGTCAAGATAGCCAACAA 59.358 45.455 0.00 0.00 0.00 2.83
2776 4578 4.072131 TGGTCAAGATAGCCAACAACTTC 58.928 43.478 0.00 0.00 0.00 3.01
2786 4588 8.624776 AGATAGCCAACAACTTCAATATTTAGC 58.375 33.333 0.00 0.00 0.00 3.09
2798 4600 9.643693 ACTTCAATATTTAGCAAATTGGAACAG 57.356 29.630 0.00 0.00 42.39 3.16
2806 4611 7.712264 TTAGCAAATTGGAACAGAAATGTTG 57.288 32.000 0.00 0.00 42.39 3.33
2880 4685 9.897744 GTGTTTATGATATACATTTGATGTGGG 57.102 33.333 3.92 0.00 44.60 4.61
2920 4725 3.047877 GTGGTTCGTTGGGCTCGG 61.048 66.667 0.00 0.00 0.00 4.63
2966 4771 2.818350 GACGAAATCCAACGACCGT 58.182 52.632 0.00 0.00 0.00 4.83
2969 4774 1.500396 GAAATCCAACGACCGTGCC 59.500 57.895 0.00 0.00 0.00 5.01
2970 4775 2.235536 GAAATCCAACGACCGTGCCG 62.236 60.000 0.00 0.00 0.00 5.69
2975 4780 4.657824 AACGACCGTGCCGACAGG 62.658 66.667 0.00 0.00 41.62 4.00
2994 4799 2.415010 CGTGGAGAGGCGGATCTG 59.585 66.667 0.00 0.00 0.00 2.90
2996 4801 2.060980 GTGGAGAGGCGGATCTGGT 61.061 63.158 3.14 0.00 0.00 4.00
2997 4802 2.060383 TGGAGAGGCGGATCTGGTG 61.060 63.158 3.14 0.00 0.00 4.17
3005 4810 1.772819 GCGGATCTGGTGGGGATGAT 61.773 60.000 3.14 0.00 0.00 2.45
3013 4818 2.646297 CTGGTGGGGATGATATGGATGT 59.354 50.000 0.00 0.00 0.00 3.06
3014 4819 3.845992 CTGGTGGGGATGATATGGATGTA 59.154 47.826 0.00 0.00 0.00 2.29
3015 4820 3.587061 TGGTGGGGATGATATGGATGTAC 59.413 47.826 0.00 0.00 0.00 2.90
3016 4821 3.587061 GGTGGGGATGATATGGATGTACA 59.413 47.826 0.00 0.00 0.00 2.90
3017 4822 4.228210 GGTGGGGATGATATGGATGTACAT 59.772 45.833 8.43 8.43 34.90 2.29
3018 4823 5.428457 GGTGGGGATGATATGGATGTACATA 59.572 44.000 8.71 0.00 37.69 2.29
3019 4824 6.408548 GGTGGGGATGATATGGATGTACATAG 60.409 46.154 8.71 0.00 36.82 2.23
3020 4825 6.156949 GTGGGGATGATATGGATGTACATAGT 59.843 42.308 8.71 0.40 36.82 2.12
3021 4826 7.344612 GTGGGGATGATATGGATGTACATAGTA 59.655 40.741 8.71 2.76 36.82 1.82
3022 4827 7.565029 TGGGGATGATATGGATGTACATAGTAG 59.435 40.741 8.71 0.00 36.82 2.57
3023 4828 7.785028 GGGGATGATATGGATGTACATAGTAGA 59.215 40.741 8.71 0.00 36.82 2.59
3024 4829 9.201989 GGGATGATATGGATGTACATAGTAGAA 57.798 37.037 8.71 0.00 36.82 2.10
3031 4836 8.964476 ATGGATGTACATAGTAGAAAACAAGG 57.036 34.615 8.71 0.00 0.00 3.61
3032 4837 6.821665 TGGATGTACATAGTAGAAAACAAGGC 59.178 38.462 8.71 0.00 0.00 4.35
3033 4838 7.048512 GGATGTACATAGTAGAAAACAAGGCT 58.951 38.462 8.71 0.00 0.00 4.58
3034 4839 7.553044 GGATGTACATAGTAGAAAACAAGGCTT 59.447 37.037 8.71 0.00 0.00 4.35
3035 4840 8.863872 ATGTACATAGTAGAAAACAAGGCTTT 57.136 30.769 6.56 0.00 0.00 3.51
3036 4841 8.685838 TGTACATAGTAGAAAACAAGGCTTTT 57.314 30.769 0.00 0.00 0.00 2.27
3037 4842 8.564574 TGTACATAGTAGAAAACAAGGCTTTTG 58.435 33.333 0.00 0.00 0.00 2.44
3038 4843 7.582667 ACATAGTAGAAAACAAGGCTTTTGT 57.417 32.000 0.00 0.00 0.00 2.83
3039 4844 8.007405 ACATAGTAGAAAACAAGGCTTTTGTT 57.993 30.769 12.17 12.17 43.72 2.83
3044 4849 2.036958 AACAAGGCTTTTGTTTGGGC 57.963 45.000 12.17 0.00 39.36 5.36
3045 4850 0.180171 ACAAGGCTTTTGTTTGGGCC 59.820 50.000 0.00 0.00 44.38 5.80
3046 4851 0.179936 CAAGGCTTTTGTTTGGGCCA 59.820 50.000 0.00 0.00 46.23 5.36
3047 4852 0.469494 AAGGCTTTTGTTTGGGCCAG 59.531 50.000 6.23 0.00 46.23 4.85
3048 4853 0.398381 AGGCTTTTGTTTGGGCCAGA 60.398 50.000 6.23 0.00 46.23 3.86
3049 4854 0.686789 GGCTTTTGTTTGGGCCAGAT 59.313 50.000 6.23 0.00 43.59 2.90
3050 4855 1.899142 GGCTTTTGTTTGGGCCAGATA 59.101 47.619 6.23 0.00 43.59 1.98
3051 4856 2.301583 GGCTTTTGTTTGGGCCAGATAA 59.698 45.455 6.23 3.81 43.59 1.75
3052 4857 3.588955 GCTTTTGTTTGGGCCAGATAAG 58.411 45.455 6.23 8.96 0.00 1.73
3053 4858 3.588955 CTTTTGTTTGGGCCAGATAAGC 58.411 45.455 6.23 0.00 0.00 3.09
3061 4866 2.959465 GGCCAGATAAGCCCATTACT 57.041 50.000 0.00 0.00 45.16 2.24
3062 4867 3.229697 GGCCAGATAAGCCCATTACTT 57.770 47.619 0.00 0.00 45.16 2.24
3063 4868 3.149981 GGCCAGATAAGCCCATTACTTC 58.850 50.000 0.00 0.00 45.16 3.01
3064 4869 3.149981 GCCAGATAAGCCCATTACTTCC 58.850 50.000 0.00 0.00 0.00 3.46
3065 4870 3.435026 GCCAGATAAGCCCATTACTTCCA 60.435 47.826 0.00 0.00 0.00 3.53
3066 4871 4.392940 CCAGATAAGCCCATTACTTCCAG 58.607 47.826 0.00 0.00 0.00 3.86
3067 4872 4.141390 CCAGATAAGCCCATTACTTCCAGT 60.141 45.833 0.00 0.00 0.00 4.00
3068 4873 5.440610 CAGATAAGCCCATTACTTCCAGTT 58.559 41.667 0.00 0.00 0.00 3.16
3069 4874 5.529060 CAGATAAGCCCATTACTTCCAGTTC 59.471 44.000 0.00 0.00 0.00 3.01
3070 4875 2.808906 AGCCCATTACTTCCAGTTCC 57.191 50.000 0.00 0.00 0.00 3.62
3071 4876 1.065418 AGCCCATTACTTCCAGTTCCG 60.065 52.381 0.00 0.00 0.00 4.30
3072 4877 1.339727 GCCCATTACTTCCAGTTCCGT 60.340 52.381 0.00 0.00 0.00 4.69
3073 4878 2.629051 CCCATTACTTCCAGTTCCGTC 58.371 52.381 0.00 0.00 0.00 4.79
3074 4879 2.027561 CCCATTACTTCCAGTTCCGTCA 60.028 50.000 0.00 0.00 0.00 4.35
3075 4880 3.000727 CCATTACTTCCAGTTCCGTCAC 58.999 50.000 0.00 0.00 0.00 3.67
3076 4881 2.427232 TTACTTCCAGTTCCGTCACG 57.573 50.000 0.00 0.00 0.00 4.35
3077 4882 1.608055 TACTTCCAGTTCCGTCACGA 58.392 50.000 0.00 0.00 0.00 4.35
3078 4883 0.748450 ACTTCCAGTTCCGTCACGAA 59.252 50.000 0.00 0.00 0.00 3.85
3079 4884 1.343465 ACTTCCAGTTCCGTCACGAAT 59.657 47.619 0.00 0.00 0.00 3.34
3080 4885 1.993370 CTTCCAGTTCCGTCACGAATC 59.007 52.381 0.00 0.00 0.00 2.52
3081 4886 0.963225 TCCAGTTCCGTCACGAATCA 59.037 50.000 0.00 0.00 0.00 2.57
3082 4887 1.067846 TCCAGTTCCGTCACGAATCAG 60.068 52.381 0.00 0.00 0.00 2.90
3083 4888 1.350193 CAGTTCCGTCACGAATCAGG 58.650 55.000 0.00 0.00 0.00 3.86
3084 4889 1.067846 CAGTTCCGTCACGAATCAGGA 60.068 52.381 0.00 0.00 0.00 3.86
3085 4890 1.067776 AGTTCCGTCACGAATCAGGAC 60.068 52.381 0.00 0.00 0.00 3.85
3086 4891 0.245539 TTCCGTCACGAATCAGGACC 59.754 55.000 0.00 0.00 0.00 4.46
3087 4892 1.153628 CCGTCACGAATCAGGACCC 60.154 63.158 0.00 0.00 0.00 4.46
3088 4893 1.589630 CGTCACGAATCAGGACCCA 59.410 57.895 0.00 0.00 0.00 4.51
3089 4894 0.175760 CGTCACGAATCAGGACCCAT 59.824 55.000 0.00 0.00 0.00 4.00
3090 4895 1.656652 GTCACGAATCAGGACCCATG 58.343 55.000 0.00 0.00 0.00 3.66
3091 4896 0.541392 TCACGAATCAGGACCCATGG 59.459 55.000 4.14 4.14 0.00 3.66
3092 4897 0.464373 CACGAATCAGGACCCATGGG 60.464 60.000 30.23 30.23 42.03 4.00
3093 4898 1.526917 CGAATCAGGACCCATGGGC 60.527 63.158 31.73 22.22 39.32 5.36
3094 4899 1.152673 GAATCAGGACCCATGGGCC 60.153 63.158 31.73 29.40 39.32 5.80
3095 4900 2.647003 GAATCAGGACCCATGGGCCC 62.647 65.000 31.73 29.96 38.16 5.80
3096 4901 3.988151 ATCAGGACCCATGGGCCCA 62.988 63.158 35.20 30.92 40.57 5.36
3097 4902 3.432335 CAGGACCCATGGGCCCAT 61.432 66.667 35.20 32.75 40.57 4.00
3098 4903 2.621449 AGGACCCATGGGCCCATT 60.621 61.111 35.20 21.61 40.57 3.16
3099 4904 2.444517 GGACCCATGGGCCCATTG 60.445 66.667 35.69 30.36 37.77 2.82
3100 4905 2.444517 GACCCATGGGCCCATTGG 60.445 66.667 40.83 40.83 42.79 3.16
3101 4906 3.283428 ACCCATGGGCCCATTGGT 61.283 61.111 42.03 42.03 44.48 3.67
3102 4907 2.040935 CCCATGGGCCCATTGGTT 59.959 61.111 36.73 17.42 35.31 3.67
3103 4908 2.065789 CCCATGGGCCCATTGGTTC 61.066 63.158 36.73 5.58 35.31 3.62
3104 4909 2.065789 CCATGGGCCCATTGGTTCC 61.066 63.158 35.69 0.00 33.90 3.62
3105 4910 2.043046 ATGGGCCCATTGGTTCCG 60.043 61.111 32.75 0.00 31.82 4.30
3106 4911 3.677480 ATGGGCCCATTGGTTCCGG 62.677 63.158 32.75 0.00 31.82 5.14
3107 4912 4.376170 GGGCCCATTGGTTCCGGT 62.376 66.667 19.95 0.00 0.00 5.28
3108 4913 2.283604 GGCCCATTGGTTCCGGTT 60.284 61.111 0.00 0.00 0.00 4.44
3109 4914 2.348104 GGCCCATTGGTTCCGGTTC 61.348 63.158 0.00 0.00 0.00 3.62
3110 4915 2.696759 GCCCATTGGTTCCGGTTCG 61.697 63.158 0.00 0.00 0.00 3.95
3111 4916 1.302993 CCCATTGGTTCCGGTTCGT 60.303 57.895 0.00 0.00 0.00 3.85
3112 4917 0.036199 CCCATTGGTTCCGGTTCGTA 60.036 55.000 0.00 0.00 0.00 3.43
3113 4918 1.611148 CCCATTGGTTCCGGTTCGTAA 60.611 52.381 0.00 0.00 0.00 3.18
3114 4919 1.735571 CCATTGGTTCCGGTTCGTAAG 59.264 52.381 0.00 0.00 0.00 2.34
3115 4920 1.735571 CATTGGTTCCGGTTCGTAAGG 59.264 52.381 0.00 0.00 38.47 2.69
3116 4921 0.603439 TTGGTTCCGGTTCGTAAGGC 60.603 55.000 0.00 0.00 38.47 4.35
3117 4922 1.742880 GGTTCCGGTTCGTAAGGCC 60.743 63.158 0.00 0.00 38.47 5.19
3118 4923 1.004679 GTTCCGGTTCGTAAGGCCA 60.005 57.895 5.01 0.00 38.47 5.36
3119 4924 1.017701 GTTCCGGTTCGTAAGGCCAG 61.018 60.000 5.01 0.00 38.47 4.85
3120 4925 2.125269 CCGGTTCGTAAGGCCAGG 60.125 66.667 5.01 0.00 38.47 4.45
3121 4926 2.125269 CGGTTCGTAAGGCCAGGG 60.125 66.667 5.01 0.00 38.47 4.45
3122 4927 2.271173 GGTTCGTAAGGCCAGGGG 59.729 66.667 5.01 0.00 38.47 4.79
3123 4928 2.271173 GTTCGTAAGGCCAGGGGG 59.729 66.667 5.01 0.00 38.47 5.40
3138 4943 4.115199 GGGCCTGCCGGACTTCAT 62.115 66.667 5.05 0.00 38.87 2.57
3139 4944 2.825836 GGCCTGCCGGACTTCATG 60.826 66.667 5.05 0.00 34.48 3.07
3140 4945 2.825836 GCCTGCCGGACTTCATGG 60.826 66.667 5.05 0.00 0.00 3.66
3141 4946 2.124570 CCTGCCGGACTTCATGGG 60.125 66.667 5.05 0.00 0.00 4.00
3142 4947 2.124570 CTGCCGGACTTCATGGGG 60.125 66.667 5.05 0.00 0.00 4.96
3143 4948 3.704231 CTGCCGGACTTCATGGGGG 62.704 68.421 5.05 0.00 0.00 5.40
3159 4964 2.754254 GGGCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 33.43 3.62
3160 4965 3.131478 GGCATTGGTCCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
3161 4966 2.359478 GCATTGGTCCCGGTTCGT 60.359 61.111 0.00 0.00 0.00 3.85
3162 4967 1.078988 GCATTGGTCCCGGTTCGTA 60.079 57.895 0.00 0.00 0.00 3.43
3163 4968 0.463116 GCATTGGTCCCGGTTCGTAT 60.463 55.000 0.00 0.00 0.00 3.06
3164 4969 1.295792 CATTGGTCCCGGTTCGTATG 58.704 55.000 0.00 0.00 0.00 2.39
3165 4970 0.179468 ATTGGTCCCGGTTCGTATGG 59.821 55.000 0.00 0.00 0.00 2.74
3166 4971 2.202974 GGTCCCGGTTCGTATGGC 60.203 66.667 0.00 0.00 0.00 4.40
3167 4972 2.202974 GTCCCGGTTCGTATGGCC 60.203 66.667 0.00 0.00 0.00 5.36
3168 4973 3.472726 TCCCGGTTCGTATGGCCC 61.473 66.667 0.00 0.00 0.00 5.80
3169 4974 4.557385 CCCGGTTCGTATGGCCCC 62.557 72.222 0.00 0.00 0.00 5.80
3170 4975 3.476419 CCGGTTCGTATGGCCCCT 61.476 66.667 0.00 0.00 0.00 4.79
3171 4976 2.587889 CGGTTCGTATGGCCCCTT 59.412 61.111 0.00 0.00 0.00 3.95
3172 4977 1.078001 CGGTTCGTATGGCCCCTTT 60.078 57.895 0.00 0.00 0.00 3.11
3173 4978 1.373590 CGGTTCGTATGGCCCCTTTG 61.374 60.000 0.00 0.00 0.00 2.77
3174 4979 0.323087 GGTTCGTATGGCCCCTTTGT 60.323 55.000 0.00 0.00 0.00 2.83
3175 4980 1.541379 GTTCGTATGGCCCCTTTGTT 58.459 50.000 0.00 0.00 0.00 2.83
3176 4981 1.471287 GTTCGTATGGCCCCTTTGTTC 59.529 52.381 0.00 0.00 0.00 3.18
3177 4982 0.034863 TCGTATGGCCCCTTTGTTCC 60.035 55.000 0.00 0.00 0.00 3.62
3178 4983 1.035385 CGTATGGCCCCTTTGTTCCC 61.035 60.000 0.00 0.00 0.00 3.97
3179 4984 1.035385 GTATGGCCCCTTTGTTCCCG 61.035 60.000 0.00 0.00 0.00 5.14
3180 4985 1.208844 TATGGCCCCTTTGTTCCCGA 61.209 55.000 0.00 0.00 0.00 5.14
3181 4986 1.874299 ATGGCCCCTTTGTTCCCGAT 61.874 55.000 0.00 0.00 0.00 4.18
3182 4987 1.304962 GGCCCCTTTGTTCCCGATT 60.305 57.895 0.00 0.00 0.00 3.34
3183 4988 1.604147 GGCCCCTTTGTTCCCGATTG 61.604 60.000 0.00 0.00 0.00 2.67
3184 4989 1.604147 GCCCCTTTGTTCCCGATTGG 61.604 60.000 0.00 0.00 0.00 3.16
3185 4990 0.251608 CCCCTTTGTTCCCGATTGGT 60.252 55.000 0.00 0.00 34.77 3.67
3186 4991 1.004979 CCCCTTTGTTCCCGATTGGTA 59.995 52.381 0.00 0.00 34.77 3.25
3187 4992 2.365582 CCCTTTGTTCCCGATTGGTAG 58.634 52.381 0.00 0.00 34.77 3.18
3188 4993 2.365582 CCTTTGTTCCCGATTGGTAGG 58.634 52.381 0.00 0.00 34.77 3.18
3189 4994 2.026636 CCTTTGTTCCCGATTGGTAGGA 60.027 50.000 0.00 0.00 34.77 2.94
3190 4995 2.773993 TTGTTCCCGATTGGTAGGAC 57.226 50.000 0.00 0.00 34.77 3.85
3191 4996 0.533491 TGTTCCCGATTGGTAGGACG 59.467 55.000 0.00 0.00 34.77 4.79
3192 4997 0.819582 GTTCCCGATTGGTAGGACGA 59.180 55.000 0.00 0.00 34.77 4.20
3193 4998 1.205417 GTTCCCGATTGGTAGGACGAA 59.795 52.381 0.00 0.00 34.77 3.85
3194 4999 0.819582 TCCCGATTGGTAGGACGAAC 59.180 55.000 0.00 0.00 34.77 3.95
3195 5000 0.179092 CCCGATTGGTAGGACGAACC 60.179 60.000 0.00 0.00 37.53 3.62
3196 5001 0.526954 CCGATTGGTAGGACGAACCG 60.527 60.000 0.00 0.00 44.74 4.44
3197 5002 0.526954 CGATTGGTAGGACGAACCGG 60.527 60.000 0.00 0.00 44.74 5.28
3198 5003 0.179092 GATTGGTAGGACGAACCGGG 60.179 60.000 6.32 0.00 44.74 5.73
3199 5004 0.615544 ATTGGTAGGACGAACCGGGA 60.616 55.000 6.32 0.00 44.74 5.14
3200 5005 1.535204 TTGGTAGGACGAACCGGGAC 61.535 60.000 6.32 0.00 44.74 4.46
3201 5006 2.714991 GGTAGGACGAACCGGGACC 61.715 68.421 6.32 0.00 44.74 4.46
3202 5007 1.978617 GTAGGACGAACCGGGACCA 60.979 63.158 6.32 0.00 44.74 4.02
3203 5008 1.228831 TAGGACGAACCGGGACCAA 60.229 57.895 6.32 0.00 44.74 3.67
3204 5009 0.615544 TAGGACGAACCGGGACCAAT 60.616 55.000 6.32 0.00 44.74 3.16
3205 5010 1.743995 GGACGAACCGGGACCAATG 60.744 63.158 6.32 0.00 0.00 2.82
3206 5011 1.743995 GACGAACCGGGACCAATGG 60.744 63.158 6.32 0.00 0.00 3.16
3207 5012 2.437716 CGAACCGGGACCAATGGG 60.438 66.667 6.32 0.00 41.29 4.00
3208 5013 2.754254 GAACCGGGACCAATGGGC 60.754 66.667 6.32 0.00 37.90 5.36
3216 5021 2.873797 GACCAATGGGCCTCACTTC 58.126 57.895 4.53 0.00 37.90 3.01
3217 5022 0.329596 GACCAATGGGCCTCACTTCT 59.670 55.000 4.53 0.00 37.90 2.85
3218 5023 0.038744 ACCAATGGGCCTCACTTCTG 59.961 55.000 4.53 0.00 37.90 3.02
3219 5024 0.682209 CCAATGGGCCTCACTTCTGG 60.682 60.000 4.53 1.40 0.00 3.86
3278 5086 0.670239 ACGCACACGCAAGATCATGA 60.670 50.000 1.25 0.00 45.53 3.07
3301 5109 1.227674 GCATAGCAACGAGAGGGGG 60.228 63.158 0.00 0.00 0.00 5.40
3398 5206 2.203070 GCCCGACCGATCAAGCAT 60.203 61.111 0.00 0.00 0.00 3.79
3490 5298 2.341101 TGTCGAGGGAGAGTTCCGC 61.341 63.158 0.00 0.00 45.04 5.54
3565 5373 5.411669 GCCTAAGCACCGCTACAATATTATT 59.588 40.000 0.00 0.00 38.25 1.40
3587 5395 1.411651 GGAGGACTATGGTGGAGGGC 61.412 65.000 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 6.189677 TCTCTTTAATGTACGCCAATTTGG 57.810 37.500 11.27 11.27 41.55 3.28
85 86 8.985805 GGGGAGTATAACACTAAATCGTTATTG 58.014 37.037 0.00 0.00 38.78 1.90
86 87 8.152898 GGGGGAGTATAACACTAAATCGTTATT 58.847 37.037 0.00 0.00 38.78 1.40
91 92 4.038402 ACGGGGGAGTATAACACTAAATCG 59.962 45.833 0.00 0.00 37.72 3.34
103 104 1.603634 ATTTTGGGACGGGGGAGTAT 58.396 50.000 0.00 0.00 0.00 2.12
113 114 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
149 151 9.502091 TGTCTCAAGCTTAGTACAATTTTGTAT 57.498 29.630 0.00 0.24 44.59 2.29
152 154 7.865707 AGTGTCTCAAGCTTAGTACAATTTTG 58.134 34.615 0.00 0.00 0.00 2.44
233 235 0.404040 ATCCTGTGAGCGGGGAAAAA 59.596 50.000 0.00 0.00 41.53 1.94
241 243 1.003116 GCAAGCATAATCCTGTGAGCG 60.003 52.381 0.00 0.00 0.00 5.03
307 309 9.561069 AGGTTCATGTCCTCAATAATTATGTAC 57.439 33.333 0.00 0.00 0.00 2.90
311 313 9.784531 CAGTAGGTTCATGTCCTCAATAATTAT 57.215 33.333 13.61 0.00 36.60 1.28
316 318 5.483937 ACACAGTAGGTTCATGTCCTCAATA 59.516 40.000 13.61 0.00 36.60 1.90
375 377 9.791820 TTGTGAAATTCAATTATACTCATGCAG 57.208 29.630 0.00 0.00 0.00 4.41
422 1045 5.220854 CCAAACATATTTAAGTCCGCTCCAG 60.221 44.000 0.00 0.00 0.00 3.86
425 1048 5.585047 AGTCCAAACATATTTAAGTCCGCTC 59.415 40.000 0.00 0.00 0.00 5.03
430 1053 7.145932 AGTGCAGTCCAAACATATTTAAGTC 57.854 36.000 0.00 0.00 0.00 3.01
449 1072 6.946340 TCTATTTGAGGAGTTGATAAGTGCA 58.054 36.000 0.00 0.00 0.00 4.57
464 1087 5.530171 CACCACATCCTCCATTCTATTTGAG 59.470 44.000 0.00 0.00 0.00 3.02
502 1128 7.256756 AGATAGCTTGTATGTTTTGAGATGC 57.743 36.000 0.00 0.00 0.00 3.91
516 1142 4.449068 CGAGTGTCAACAAAGATAGCTTGT 59.551 41.667 0.00 0.00 33.79 3.16
518 1144 3.997021 CCGAGTGTCAACAAAGATAGCTT 59.003 43.478 0.00 0.00 35.37 3.74
565 1307 9.615295 GAAGTAACTACTCAGTCTCAAGTTAAG 57.385 37.037 0.32 0.00 35.17 1.85
567 1309 8.687292 TGAAGTAACTACTCAGTCTCAAGTTA 57.313 34.615 0.00 0.00 34.99 2.24
571 1313 5.770663 AGCTGAAGTAACTACTCAGTCTCAA 59.229 40.000 9.17 0.00 35.65 3.02
575 1317 6.802834 GTGTAAGCTGAAGTAACTACTCAGTC 59.197 42.308 9.17 4.07 35.65 3.51
576 1318 6.264744 TGTGTAAGCTGAAGTAACTACTCAGT 59.735 38.462 9.17 0.00 35.65 3.41
577 1319 6.678878 TGTGTAAGCTGAAGTAACTACTCAG 58.321 40.000 0.00 4.83 34.99 3.35
578 1320 6.644248 TGTGTAAGCTGAAGTAACTACTCA 57.356 37.500 0.00 0.00 34.99 3.41
600 1342 5.619220 AGAAGCTAATTTCAGGAGGCTATG 58.381 41.667 0.00 0.00 0.00 2.23
611 1353 9.278734 CAATAAAGAAACGGAGAAGCTAATTTC 57.721 33.333 0.00 0.00 0.00 2.17
645 1387 2.061028 CCGGTGCAAAAGATTTTCAGC 58.939 47.619 0.00 8.39 0.00 4.26
646 1388 2.061028 GCCGGTGCAAAAGATTTTCAG 58.939 47.619 1.90 0.00 37.47 3.02
649 1392 0.387565 ACGCCGGTGCAAAAGATTTT 59.612 45.000 16.69 0.00 37.32 1.82
675 1418 3.257873 CGAGGAGGCATGTTGAGATCTAT 59.742 47.826 0.00 0.00 0.00 1.98
680 1423 0.976641 AACGAGGAGGCATGTTGAGA 59.023 50.000 0.00 0.00 0.00 3.27
683 1426 1.238439 ACAAACGAGGAGGCATGTTG 58.762 50.000 0.00 0.00 0.00 3.33
706 1449 7.141363 CAGAGACAAACACTTAAAATTCCAGG 58.859 38.462 0.00 0.00 0.00 4.45
708 1451 6.460953 GGCAGAGACAAACACTTAAAATTCCA 60.461 38.462 0.00 0.00 0.00 3.53
712 1455 6.507023 CAAGGCAGAGACAAACACTTAAAAT 58.493 36.000 0.00 0.00 0.00 1.82
722 1465 4.876701 ACGCAAGGCAGAGACAAA 57.123 50.000 0.00 0.00 46.39 2.83
765 1508 2.498807 TGCAAGATAGCTAGCAGACG 57.501 50.000 18.83 0.93 34.99 4.18
770 1513 2.869192 GTTGACCTGCAAGATAGCTAGC 59.131 50.000 6.62 6.62 37.12 3.42
784 1527 1.911357 TGCATCAGATCCAGTTGACCT 59.089 47.619 0.00 0.00 0.00 3.85
791 1534 6.145209 CGAGTAGTAAATTGCATCAGATCCAG 59.855 42.308 0.00 0.00 0.00 3.86
792 1535 5.985530 CGAGTAGTAAATTGCATCAGATCCA 59.014 40.000 0.00 0.00 0.00 3.41
794 1537 7.062839 GGATCGAGTAGTAAATTGCATCAGATC 59.937 40.741 0.00 0.00 0.00 2.75
798 1541 5.985530 CAGGATCGAGTAGTAAATTGCATCA 59.014 40.000 0.00 0.00 0.00 3.07
826 1569 4.142469 CGGGTTCCAAGGAAACAATCATAC 60.142 45.833 17.95 0.00 43.15 2.39
830 1573 2.228103 GACGGGTTCCAAGGAAACAATC 59.772 50.000 17.95 10.72 43.15 2.67
862 1605 2.689983 CAGCTTCTGGTGAGGTTTTTGT 59.310 45.455 0.00 0.00 43.76 2.83
892 1635 2.063266 GTGGTTCATTTGACGCGTAGA 58.937 47.619 13.97 0.00 0.00 2.59
906 1649 7.624360 TGACATAATTTATCTGGTGTGGTTC 57.376 36.000 0.00 0.00 0.00 3.62
911 1654 6.653020 TCAGCTGACATAATTTATCTGGTGT 58.347 36.000 13.74 0.00 39.43 4.16
919 1662 9.317936 CTTGTCACTATCAGCTGACATAATTTA 57.682 33.333 20.97 4.59 44.79 1.40
999 1743 6.233430 TGTTTTGTTTTGTGTTGGATGTTG 57.767 33.333 0.00 0.00 0.00 3.33
1046 1795 0.675837 TGCTGTTGCTGCTCTGGATC 60.676 55.000 0.00 0.00 40.48 3.36
1048 1797 1.148949 TTGCTGTTGCTGCTCTGGA 59.851 52.632 0.00 0.00 40.48 3.86
1086 1835 2.047179 GAGGCCGTGAACCAGGAC 60.047 66.667 0.00 0.00 35.21 3.85
1274 2023 4.504916 CTCTCGCTGCCACCCTCG 62.505 72.222 0.00 0.00 0.00 4.63
1483 2442 1.726853 ACGGCAGTGAAATACAGAGC 58.273 50.000 0.00 0.00 0.00 4.09
1558 2519 2.035961 CTCAGTCGGGTCTTGAACTCAA 59.964 50.000 0.00 0.00 0.00 3.02
1559 2520 1.613925 CTCAGTCGGGTCTTGAACTCA 59.386 52.381 0.00 0.00 0.00 3.41
1560 2521 1.067495 CCTCAGTCGGGTCTTGAACTC 60.067 57.143 0.00 0.00 0.00 3.01
1561 2522 0.969894 CCTCAGTCGGGTCTTGAACT 59.030 55.000 0.00 0.00 0.00 3.01
1562 2523 0.670854 GCCTCAGTCGGGTCTTGAAC 60.671 60.000 0.00 0.00 0.00 3.18
1563 2524 1.118965 TGCCTCAGTCGGGTCTTGAA 61.119 55.000 0.00 0.00 0.00 2.69
1564 2525 1.118965 TTGCCTCAGTCGGGTCTTGA 61.119 55.000 0.00 0.00 0.00 3.02
1565 2526 0.671781 CTTGCCTCAGTCGGGTCTTG 60.672 60.000 0.00 0.00 0.00 3.02
1566 2527 1.122019 ACTTGCCTCAGTCGGGTCTT 61.122 55.000 0.00 0.00 0.00 3.01
1567 2528 0.251653 TACTTGCCTCAGTCGGGTCT 60.252 55.000 0.00 0.00 0.00 3.85
1568 2529 0.606604 TTACTTGCCTCAGTCGGGTC 59.393 55.000 0.00 0.00 0.00 4.46
1569 2530 1.053424 TTTACTTGCCTCAGTCGGGT 58.947 50.000 0.00 0.00 0.00 5.28
1570 2531 2.403252 ATTTACTTGCCTCAGTCGGG 57.597 50.000 0.00 0.00 0.00 5.14
1571 2532 3.747099 CAATTTACTTGCCTCAGTCGG 57.253 47.619 0.00 0.00 0.00 4.79
1581 2542 4.996122 TGAAAATGGGCTGCAATTTACTTG 59.004 37.500 11.43 0.00 37.94 3.16
1582 2543 5.221702 ACTGAAAATGGGCTGCAATTTACTT 60.222 36.000 11.43 0.00 0.00 2.24
1583 2544 4.284234 ACTGAAAATGGGCTGCAATTTACT 59.716 37.500 11.43 0.25 0.00 2.24
1584 2545 4.568956 ACTGAAAATGGGCTGCAATTTAC 58.431 39.130 11.43 0.00 0.00 2.01
1585 2546 4.322650 GGACTGAAAATGGGCTGCAATTTA 60.323 41.667 11.43 0.00 0.00 1.40
1586 2547 3.557686 GGACTGAAAATGGGCTGCAATTT 60.558 43.478 0.50 4.37 0.00 1.82
1587 2548 2.027837 GGACTGAAAATGGGCTGCAATT 60.028 45.455 0.50 0.00 0.00 2.32
1588 2549 1.551883 GGACTGAAAATGGGCTGCAAT 59.448 47.619 0.50 0.00 0.00 3.56
1589 2550 0.968405 GGACTGAAAATGGGCTGCAA 59.032 50.000 0.50 0.00 0.00 4.08
1590 2551 0.178967 TGGACTGAAAATGGGCTGCA 60.179 50.000 0.50 0.00 0.00 4.41
1591 2552 0.244721 GTGGACTGAAAATGGGCTGC 59.755 55.000 0.00 0.00 0.00 5.25
1592 2553 0.523072 CGTGGACTGAAAATGGGCTG 59.477 55.000 0.00 0.00 0.00 4.85
1593 2554 0.110486 ACGTGGACTGAAAATGGGCT 59.890 50.000 0.00 0.00 0.00 5.19
1594 2555 0.958822 AACGTGGACTGAAAATGGGC 59.041 50.000 0.00 0.00 0.00 5.36
1595 2556 3.190535 CCTAAACGTGGACTGAAAATGGG 59.809 47.826 0.00 0.00 0.00 4.00
1596 2557 3.365969 GCCTAAACGTGGACTGAAAATGG 60.366 47.826 0.00 0.00 0.00 3.16
1597 2558 3.502211 AGCCTAAACGTGGACTGAAAATG 59.498 43.478 0.00 0.00 0.00 2.32
1598 2559 3.751518 AGCCTAAACGTGGACTGAAAAT 58.248 40.909 0.00 0.00 0.00 1.82
1599 2560 3.202829 AGCCTAAACGTGGACTGAAAA 57.797 42.857 0.00 0.00 0.00 2.29
1600 2561 2.875933 CAAGCCTAAACGTGGACTGAAA 59.124 45.455 0.00 0.00 0.00 2.69
1601 2562 2.103432 TCAAGCCTAAACGTGGACTGAA 59.897 45.455 0.00 0.00 0.00 3.02
1602 2563 1.689813 TCAAGCCTAAACGTGGACTGA 59.310 47.619 0.00 0.00 0.00 3.41
1603 2564 2.069273 CTCAAGCCTAAACGTGGACTG 58.931 52.381 0.00 0.00 0.00 3.51
1604 2565 1.002087 CCTCAAGCCTAAACGTGGACT 59.998 52.381 0.00 0.00 0.00 3.85
1605 2566 1.439679 CCTCAAGCCTAAACGTGGAC 58.560 55.000 0.00 0.00 0.00 4.02
1606 2567 0.323629 CCCTCAAGCCTAAACGTGGA 59.676 55.000 0.00 0.00 0.00 4.02
1607 2568 0.323629 TCCCTCAAGCCTAAACGTGG 59.676 55.000 0.00 0.00 0.00 4.94
1608 2569 1.726853 CTCCCTCAAGCCTAAACGTG 58.273 55.000 0.00 0.00 0.00 4.49
1609 2570 0.036294 GCTCCCTCAAGCCTAAACGT 60.036 55.000 0.00 0.00 36.22 3.99
1610 2571 2.768834 GCTCCCTCAAGCCTAAACG 58.231 57.895 0.00 0.00 36.22 3.60
1617 2578 2.743928 CGTGTGGCTCCCTCAAGC 60.744 66.667 0.00 0.00 41.73 4.01
1618 2579 1.669115 CACGTGTGGCTCCCTCAAG 60.669 63.158 7.58 0.00 33.92 3.02
1619 2580 2.099652 CTCACGTGTGGCTCCCTCAA 62.100 60.000 16.51 0.00 0.00 3.02
1620 2581 2.523168 TCACGTGTGGCTCCCTCA 60.523 61.111 16.51 0.00 0.00 3.86
1621 2582 2.262915 CTCACGTGTGGCTCCCTC 59.737 66.667 16.51 0.00 0.00 4.30
1622 2583 3.314331 CCTCACGTGTGGCTCCCT 61.314 66.667 22.53 0.00 0.00 4.20
1623 2584 4.394712 CCCTCACGTGTGGCTCCC 62.395 72.222 27.37 0.00 0.00 4.30
1624 2585 4.394712 CCCCTCACGTGTGGCTCC 62.395 72.222 27.37 0.00 0.00 4.70
1625 2586 2.185310 ATTCCCCTCACGTGTGGCTC 62.185 60.000 27.37 0.00 0.00 4.70
1626 2587 2.224159 ATTCCCCTCACGTGTGGCT 61.224 57.895 27.37 11.19 0.00 4.75
1627 2588 2.040544 CATTCCCCTCACGTGTGGC 61.041 63.158 27.37 0.00 0.00 5.01
1628 2589 0.250727 AACATTCCCCTCACGTGTGG 60.251 55.000 26.15 26.15 0.00 4.17
1629 2590 0.874390 CAACATTCCCCTCACGTGTG 59.126 55.000 16.51 13.39 0.00 3.82
1630 2591 0.762418 TCAACATTCCCCTCACGTGT 59.238 50.000 16.51 0.00 0.00 4.49
1631 2592 1.156736 GTCAACATTCCCCTCACGTG 58.843 55.000 9.94 9.94 0.00 4.49
1632 2593 0.320421 CGTCAACATTCCCCTCACGT 60.320 55.000 0.00 0.00 0.00 4.49
1633 2594 0.320421 ACGTCAACATTCCCCTCACG 60.320 55.000 0.00 0.00 0.00 4.35
1634 2595 2.754946 TACGTCAACATTCCCCTCAC 57.245 50.000 0.00 0.00 0.00 3.51
1635 2596 5.104693 ACATTATACGTCAACATTCCCCTCA 60.105 40.000 0.00 0.00 0.00 3.86
1636 2597 5.236478 CACATTATACGTCAACATTCCCCTC 59.764 44.000 0.00 0.00 0.00 4.30
1637 2598 5.123227 CACATTATACGTCAACATTCCCCT 58.877 41.667 0.00 0.00 0.00 4.79
1638 2599 4.261031 GCACATTATACGTCAACATTCCCC 60.261 45.833 0.00 0.00 0.00 4.81
1639 2600 4.334203 TGCACATTATACGTCAACATTCCC 59.666 41.667 0.00 0.00 0.00 3.97
1640 2601 5.478233 TGCACATTATACGTCAACATTCC 57.522 39.130 0.00 0.00 0.00 3.01
1641 2602 4.963953 GCTGCACATTATACGTCAACATTC 59.036 41.667 0.00 0.00 0.00 2.67
1642 2603 4.201910 GGCTGCACATTATACGTCAACATT 60.202 41.667 0.50 0.00 0.00 2.71
1643 2604 3.312421 GGCTGCACATTATACGTCAACAT 59.688 43.478 0.50 0.00 0.00 2.71
1644 2605 2.675844 GGCTGCACATTATACGTCAACA 59.324 45.455 0.50 0.00 0.00 3.33
1645 2606 2.936498 AGGCTGCACATTATACGTCAAC 59.064 45.455 0.50 0.00 0.00 3.18
1646 2607 3.260475 AGGCTGCACATTATACGTCAA 57.740 42.857 0.50 0.00 0.00 3.18
1647 2608 2.979814 AGGCTGCACATTATACGTCA 57.020 45.000 0.50 0.00 0.00 4.35
1648 2609 3.978687 ACTAGGCTGCACATTATACGTC 58.021 45.455 0.50 0.00 0.00 4.34
1649 2610 3.637229 AGACTAGGCTGCACATTATACGT 59.363 43.478 0.00 0.00 0.00 3.57
1650 2611 4.022762 AGAGACTAGGCTGCACATTATACG 60.023 45.833 0.42 0.00 0.00 3.06
1651 2612 5.461032 AGAGACTAGGCTGCACATTATAC 57.539 43.478 0.42 0.00 0.00 1.47
1652 2613 5.011125 GGAAGAGACTAGGCTGCACATTATA 59.989 44.000 0.42 0.00 0.00 0.98
1653 2614 4.202305 GGAAGAGACTAGGCTGCACATTAT 60.202 45.833 0.42 0.00 0.00 1.28
1654 2615 3.133003 GGAAGAGACTAGGCTGCACATTA 59.867 47.826 0.42 0.00 0.00 1.90
1655 2616 2.093235 GGAAGAGACTAGGCTGCACATT 60.093 50.000 0.42 0.00 0.00 2.71
1656 2617 1.484240 GGAAGAGACTAGGCTGCACAT 59.516 52.381 0.42 0.00 0.00 3.21
1657 2618 0.898320 GGAAGAGACTAGGCTGCACA 59.102 55.000 0.42 0.00 0.00 4.57
1658 2619 0.898320 TGGAAGAGACTAGGCTGCAC 59.102 55.000 0.42 0.00 0.00 4.57
1659 2620 1.759445 GATGGAAGAGACTAGGCTGCA 59.241 52.381 0.42 0.00 0.00 4.41
1660 2621 1.759445 TGATGGAAGAGACTAGGCTGC 59.241 52.381 0.42 0.00 0.00 5.25
1661 2622 3.295093 TCTGATGGAAGAGACTAGGCTG 58.705 50.000 0.42 0.00 0.00 4.85
1662 2623 3.678965 TCTGATGGAAGAGACTAGGCT 57.321 47.619 0.00 0.00 0.00 4.58
1663 2624 3.057596 CGATCTGATGGAAGAGACTAGGC 60.058 52.174 0.00 0.00 0.00 3.93
1664 2625 3.505680 CCGATCTGATGGAAGAGACTAGG 59.494 52.174 0.83 0.00 0.00 3.02
1665 2626 4.141287 ACCGATCTGATGGAAGAGACTAG 58.859 47.826 11.46 0.00 0.00 2.57
1666 2627 4.138290 GACCGATCTGATGGAAGAGACTA 58.862 47.826 11.46 0.00 0.00 2.59
1667 2628 2.955660 GACCGATCTGATGGAAGAGACT 59.044 50.000 11.46 0.00 0.00 3.24
1668 2629 2.955660 AGACCGATCTGATGGAAGAGAC 59.044 50.000 11.46 0.00 32.29 3.36
1669 2630 3.304911 AGACCGATCTGATGGAAGAGA 57.695 47.619 11.46 0.00 32.29 3.10
1670 2631 4.399004 AAAGACCGATCTGATGGAAGAG 57.601 45.455 11.46 0.00 34.48 2.85
1671 2632 4.507710 CAAAAGACCGATCTGATGGAAGA 58.492 43.478 11.46 0.00 34.48 2.87
1672 2633 3.624861 CCAAAAGACCGATCTGATGGAAG 59.375 47.826 5.34 0.00 34.48 3.46
1673 2634 3.009033 ACCAAAAGACCGATCTGATGGAA 59.991 43.478 16.17 0.00 34.48 3.53
1674 2635 2.571653 ACCAAAAGACCGATCTGATGGA 59.428 45.455 16.17 0.00 34.48 3.41
1675 2636 2.991250 ACCAAAAGACCGATCTGATGG 58.009 47.619 9.14 9.14 34.48 3.51
1676 2637 3.426695 GCAACCAAAAGACCGATCTGATG 60.427 47.826 0.00 0.00 34.48 3.07
1682 2643 2.029110 CCAATGCAACCAAAAGACCGAT 60.029 45.455 0.00 0.00 0.00 4.18
1685 2646 1.070601 AGCCAATGCAACCAAAAGACC 59.929 47.619 0.00 0.00 41.13 3.85
1688 2649 2.288948 TGCTAGCCAATGCAACCAAAAG 60.289 45.455 13.29 0.00 41.13 2.27
1690 2651 1.000731 GTGCTAGCCAATGCAACCAAA 59.999 47.619 13.29 0.00 41.10 3.28
1696 2657 0.966370 TGCATGTGCTAGCCAATGCA 60.966 50.000 33.66 33.66 41.91 3.96
1697 2658 0.526954 GTGCATGTGCTAGCCAATGC 60.527 55.000 30.56 30.56 42.66 3.56
1698 2659 1.100510 AGTGCATGTGCTAGCCAATG 58.899 50.000 13.29 16.22 42.66 2.82
1701 2662 0.325933 AGAAGTGCATGTGCTAGCCA 59.674 50.000 13.29 10.31 42.66 4.75
1809 2778 8.689061 TGATGCAGCTTCTATACAATGATTTTT 58.311 29.630 2.53 0.00 0.00 1.94
1810 2779 8.229253 TGATGCAGCTTCTATACAATGATTTT 57.771 30.769 2.53 0.00 0.00 1.82
1811 2780 7.812690 TGATGCAGCTTCTATACAATGATTT 57.187 32.000 2.53 0.00 0.00 2.17
1812 2781 7.255381 GGTTGATGCAGCTTCTATACAATGATT 60.255 37.037 2.53 0.00 0.00 2.57
1813 2782 6.206243 GGTTGATGCAGCTTCTATACAATGAT 59.794 38.462 2.53 0.00 0.00 2.45
1814 2783 5.528690 GGTTGATGCAGCTTCTATACAATGA 59.471 40.000 2.53 0.00 0.00 2.57
1815 2784 5.530171 AGGTTGATGCAGCTTCTATACAATG 59.470 40.000 2.53 0.00 0.00 2.82
1816 2785 5.688807 AGGTTGATGCAGCTTCTATACAAT 58.311 37.500 2.53 0.00 0.00 2.71
1817 2786 5.102953 AGGTTGATGCAGCTTCTATACAA 57.897 39.130 2.53 0.00 0.00 2.41
1818 2787 4.760530 AGGTTGATGCAGCTTCTATACA 57.239 40.909 2.53 0.00 0.00 2.29
1823 2792 7.308450 TCTATATAAGGTTGATGCAGCTTCT 57.692 36.000 2.53 0.00 36.00 2.85
1824 2793 6.593382 CCTCTATATAAGGTTGATGCAGCTTC 59.407 42.308 2.53 1.18 36.00 3.86
1827 2796 4.633565 GCCTCTATATAAGGTTGATGCAGC 59.366 45.833 0.00 0.00 36.21 5.25
1828 2797 6.047511 AGCCTCTATATAAGGTTGATGCAG 57.952 41.667 0.00 0.00 36.21 4.41
1829 2798 6.070767 GGTAGCCTCTATATAAGGTTGATGCA 60.071 42.308 0.00 0.00 36.21 3.96
1830 2799 6.342111 GGTAGCCTCTATATAAGGTTGATGC 58.658 44.000 10.69 2.19 36.21 3.91
1831 2800 6.405953 CGGGTAGCCTCTATATAAGGTTGATG 60.406 46.154 9.73 0.00 36.21 3.07
1832 2801 5.657302 CGGGTAGCCTCTATATAAGGTTGAT 59.343 44.000 9.73 2.00 36.21 2.57
1833 2802 5.014858 CGGGTAGCCTCTATATAAGGTTGA 58.985 45.833 9.73 0.00 36.21 3.18
1834 2803 4.381718 GCGGGTAGCCTCTATATAAGGTTG 60.382 50.000 9.73 0.00 40.81 3.77
1835 2804 3.768215 GCGGGTAGCCTCTATATAAGGTT 59.232 47.826 9.73 8.31 40.81 3.50
1836 2805 3.363627 GCGGGTAGCCTCTATATAAGGT 58.636 50.000 9.73 0.54 40.81 3.50
1875 2844 6.566753 GCATCGGAATTTATTGAAGTAGCCTC 60.567 42.308 0.00 0.00 0.00 4.70
1876 2845 5.239525 GCATCGGAATTTATTGAAGTAGCCT 59.760 40.000 0.00 0.00 0.00 4.58
1877 2846 5.008613 TGCATCGGAATTTATTGAAGTAGCC 59.991 40.000 0.00 0.00 0.00 3.93
1878 2847 6.060028 TGCATCGGAATTTATTGAAGTAGC 57.940 37.500 0.00 0.00 0.00 3.58
1879 2848 7.134815 CCTTGCATCGGAATTTATTGAAGTAG 58.865 38.462 0.00 0.00 0.00 2.57
1889 2858 1.106285 GCTCCCTTGCATCGGAATTT 58.894 50.000 4.23 0.00 0.00 1.82
1895 2864 2.245159 TATTGAGCTCCCTTGCATCG 57.755 50.000 12.15 0.00 34.99 3.84
1898 2867 7.944000 TCATATAAAATATTGAGCTCCCTTGCA 59.056 33.333 12.15 0.00 34.99 4.08
1899 2868 8.340618 TCATATAAAATATTGAGCTCCCTTGC 57.659 34.615 12.15 0.00 0.00 4.01
2018 3550 9.909644 AGAAAATCATGCATAGCTATTCATTTC 57.090 29.630 15.16 15.73 0.00 2.17
2121 3828 6.267471 TCCTTCCAACAACAAAAAGCAGATAT 59.733 34.615 0.00 0.00 0.00 1.63
2122 3829 5.596361 TCCTTCCAACAACAAAAAGCAGATA 59.404 36.000 0.00 0.00 0.00 1.98
2124 3831 3.766591 TCCTTCCAACAACAAAAAGCAGA 59.233 39.130 0.00 0.00 0.00 4.26
2126 3833 3.513515 ACTCCTTCCAACAACAAAAAGCA 59.486 39.130 0.00 0.00 0.00 3.91
2127 3834 4.123497 ACTCCTTCCAACAACAAAAAGC 57.877 40.909 0.00 0.00 0.00 3.51
2128 3835 5.163693 ACGTACTCCTTCCAACAACAAAAAG 60.164 40.000 0.00 0.00 0.00 2.27
2139 3846 4.462483 ACGGTTTATAACGTACTCCTTCCA 59.538 41.667 0.00 0.00 42.15 3.53
2140 3847 4.800471 CACGGTTTATAACGTACTCCTTCC 59.200 45.833 0.00 0.00 42.04 3.46
2141 3848 4.800471 CCACGGTTTATAACGTACTCCTTC 59.200 45.833 0.00 0.00 42.04 3.46
2142 3849 4.220602 ACCACGGTTTATAACGTACTCCTT 59.779 41.667 0.00 0.00 42.04 3.36
2143 3850 3.763897 ACCACGGTTTATAACGTACTCCT 59.236 43.478 0.00 0.00 42.04 3.69
2151 3858 7.599998 TCAAAGTTAGAGACCACGGTTTATAAC 59.400 37.037 13.58 13.58 37.25 1.89
2210 3918 5.441718 ACTAATCACATCCCATCACAAGT 57.558 39.130 0.00 0.00 0.00 3.16
2244 3952 0.179062 AGCAGTCCTTCCGATGATGC 60.179 55.000 0.00 0.00 0.00 3.91
2261 3969 1.497223 GCATCTCGCAGTCCATGAGC 61.497 60.000 0.00 0.00 41.79 4.26
2309 4017 1.473258 GGCCCACTATGATTGCAACA 58.527 50.000 0.00 2.38 0.00 3.33
2385 4093 9.988815 TTATAAGAGATCAAGAGGATGTTAAGC 57.011 33.333 0.00 0.00 36.00 3.09
2536 4338 3.389002 TCATCACTGGATCATCCACGAAT 59.611 43.478 0.66 0.00 42.67 3.34
2582 4384 0.390603 TTCACCGACCCATAGTTGCG 60.391 55.000 0.00 0.00 0.00 4.85
2626 4428 1.980765 TCCTCAGTGCTGGAAACATCT 59.019 47.619 2.76 0.00 41.51 2.90
2632 4434 0.251354 GCATCTCCTCAGTGCTGGAA 59.749 55.000 6.24 0.14 36.02 3.53
2641 4443 1.078918 CCAGCGTTGCATCTCCTCA 60.079 57.895 0.00 0.00 0.00 3.86
2680 4482 1.404315 GCAATCTCCTCGACTTCCGTT 60.404 52.381 0.00 0.00 39.75 4.44
2698 4500 4.687215 GCGTGGTCAGCTCCTGCA 62.687 66.667 4.94 0.00 42.74 4.41
2772 4574 9.643693 CTGTTCCAATTTGCTAAATATTGAAGT 57.356 29.630 0.00 0.00 32.36 3.01
2785 4587 5.989551 ACAACATTTCTGTTCCAATTTGC 57.010 34.783 0.00 0.00 43.76 3.68
2786 4588 7.972527 TCAAACAACATTTCTGTTCCAATTTG 58.027 30.769 0.00 0.00 43.76 2.32
2969 4774 4.135153 CCTCTCCACGGCCTGTCG 62.135 72.222 0.00 0.00 0.00 4.35
2970 4775 4.459089 GCCTCTCCACGGCCTGTC 62.459 72.222 0.00 0.00 41.73 3.51
2978 4783 2.060980 ACCAGATCCGCCTCTCCAC 61.061 63.158 0.00 0.00 0.00 4.02
2989 4794 3.184628 TCCATATCATCCCCACCAGATC 58.815 50.000 0.00 0.00 0.00 2.75
2990 4795 3.296399 TCCATATCATCCCCACCAGAT 57.704 47.619 0.00 0.00 0.00 2.90
2994 4799 3.587061 TGTACATCCATATCATCCCCACC 59.413 47.826 0.00 0.00 0.00 4.61
2996 4801 6.271537 ACTATGTACATCCATATCATCCCCA 58.728 40.000 12.68 0.00 0.00 4.96
2997 4802 6.814954 ACTATGTACATCCATATCATCCCC 57.185 41.667 12.68 0.00 0.00 4.81
3013 4818 8.685838 ACAAAAGCCTTGTTTTCTACTATGTA 57.314 30.769 0.00 0.00 0.00 2.29
3014 4819 7.582667 ACAAAAGCCTTGTTTTCTACTATGT 57.417 32.000 0.00 0.00 0.00 2.29
3015 4820 8.755018 CAAACAAAAGCCTTGTTTTCTACTATG 58.245 33.333 19.44 7.66 46.76 2.23
3016 4821 7.926018 CCAAACAAAAGCCTTGTTTTCTACTAT 59.074 33.333 19.44 0.44 46.76 2.12
3017 4822 7.262048 CCAAACAAAAGCCTTGTTTTCTACTA 58.738 34.615 19.44 0.00 46.76 1.82
3018 4823 6.106003 CCAAACAAAAGCCTTGTTTTCTACT 58.894 36.000 19.44 1.60 46.76 2.57
3019 4824 5.293324 CCCAAACAAAAGCCTTGTTTTCTAC 59.707 40.000 19.44 0.00 46.76 2.59
3020 4825 5.423886 CCCAAACAAAAGCCTTGTTTTCTA 58.576 37.500 19.44 0.00 46.76 2.10
3021 4826 4.260985 CCCAAACAAAAGCCTTGTTTTCT 58.739 39.130 19.44 2.77 46.76 2.52
3022 4827 3.181501 GCCCAAACAAAAGCCTTGTTTTC 60.182 43.478 19.44 11.14 46.76 2.29
3023 4828 2.752354 GCCCAAACAAAAGCCTTGTTTT 59.248 40.909 19.44 0.74 46.76 2.43
3025 4830 1.408127 GGCCCAAACAAAAGCCTTGTT 60.408 47.619 8.36 8.36 43.72 2.83
3026 4831 0.180171 GGCCCAAACAAAAGCCTTGT 59.820 50.000 0.00 0.00 42.34 3.16
3027 4832 0.179936 TGGCCCAAACAAAAGCCTTG 59.820 50.000 0.00 0.00 45.94 3.61
3028 4833 0.469494 CTGGCCCAAACAAAAGCCTT 59.531 50.000 0.00 0.00 45.94 4.35
3029 4834 0.398381 TCTGGCCCAAACAAAAGCCT 60.398 50.000 0.00 0.00 45.94 4.58
3030 4835 0.686789 ATCTGGCCCAAACAAAAGCC 59.313 50.000 0.00 0.00 45.96 4.35
3031 4836 3.588955 CTTATCTGGCCCAAACAAAAGC 58.411 45.455 0.00 0.00 0.00 3.51
3032 4837 3.588955 GCTTATCTGGCCCAAACAAAAG 58.411 45.455 0.00 0.00 0.00 2.27
3033 4838 2.301583 GGCTTATCTGGCCCAAACAAAA 59.698 45.455 0.00 0.00 43.49 2.44
3034 4839 1.899142 GGCTTATCTGGCCCAAACAAA 59.101 47.619 0.00 0.00 43.49 2.83
3035 4840 1.555967 GGCTTATCTGGCCCAAACAA 58.444 50.000 0.00 0.00 43.49 2.83
3036 4841 3.281332 GGCTTATCTGGCCCAAACA 57.719 52.632 0.00 0.00 43.49 2.83
3043 4848 3.149981 GGAAGTAATGGGCTTATCTGGC 58.850 50.000 0.00 0.00 0.00 4.85
3044 4849 4.392940 CTGGAAGTAATGGGCTTATCTGG 58.607 47.826 0.00 0.00 0.00 3.86
3060 4865 1.993370 GATTCGTGACGGAACTGGAAG 59.007 52.381 4.70 0.00 42.29 3.46
3061 4866 1.341852 TGATTCGTGACGGAACTGGAA 59.658 47.619 4.70 0.00 0.00 3.53
3062 4867 0.963225 TGATTCGTGACGGAACTGGA 59.037 50.000 4.70 0.00 0.00 3.86
3063 4868 1.350193 CTGATTCGTGACGGAACTGG 58.650 55.000 4.70 0.00 0.00 4.00
3064 4869 1.067846 TCCTGATTCGTGACGGAACTG 60.068 52.381 4.70 0.00 0.00 3.16
3065 4870 1.067776 GTCCTGATTCGTGACGGAACT 60.068 52.381 4.70 0.00 0.00 3.01
3066 4871 1.347320 GTCCTGATTCGTGACGGAAC 58.653 55.000 4.70 0.00 0.00 3.62
3067 4872 0.245539 GGTCCTGATTCGTGACGGAA 59.754 55.000 4.70 0.00 0.00 4.30
3068 4873 1.601419 GGGTCCTGATTCGTGACGGA 61.601 60.000 4.70 0.00 0.00 4.69
3069 4874 1.153628 GGGTCCTGATTCGTGACGG 60.154 63.158 4.70 0.00 0.00 4.79
3070 4875 0.175760 ATGGGTCCTGATTCGTGACG 59.824 55.000 0.00 0.00 0.00 4.35
3071 4876 1.656652 CATGGGTCCTGATTCGTGAC 58.343 55.000 0.00 0.00 0.00 3.67
3072 4877 0.541392 CCATGGGTCCTGATTCGTGA 59.459 55.000 2.85 0.00 0.00 4.35
3073 4878 0.464373 CCCATGGGTCCTGATTCGTG 60.464 60.000 23.93 0.00 0.00 4.35
3074 4879 1.915228 CCCATGGGTCCTGATTCGT 59.085 57.895 23.93 0.00 0.00 3.85
3075 4880 1.526917 GCCCATGGGTCCTGATTCG 60.527 63.158 31.58 2.64 37.65 3.34
3076 4881 1.152673 GGCCCATGGGTCCTGATTC 60.153 63.158 31.58 12.26 37.65 2.52
3077 4882 3.018901 GGCCCATGGGTCCTGATT 58.981 61.111 31.58 0.00 37.65 2.57
3083 4888 2.444517 CCAATGGGCCCATGGGTC 60.445 66.667 41.17 30.09 41.50 4.46
3086 4891 2.065789 GGAACCAATGGGCCCATGG 61.066 63.158 38.06 35.66 36.68 3.66
3087 4892 2.425569 CGGAACCAATGGGCCCATG 61.426 63.158 38.06 27.43 36.68 3.66
3088 4893 2.043046 CGGAACCAATGGGCCCAT 60.043 61.111 32.75 32.75 37.90 4.00
3089 4894 4.374584 CCGGAACCAATGGGCCCA 62.375 66.667 30.92 30.92 37.90 5.36
3090 4895 3.897681 AACCGGAACCAATGGGCCC 62.898 63.158 17.59 17.59 37.90 5.80
3091 4896 2.283604 AACCGGAACCAATGGGCC 60.284 61.111 9.46 3.63 37.90 5.80
3092 4897 2.696759 CGAACCGGAACCAATGGGC 61.697 63.158 9.46 0.00 37.90 5.36
3093 4898 0.036199 TACGAACCGGAACCAATGGG 60.036 55.000 9.46 0.00 41.29 4.00
3094 4899 1.735571 CTTACGAACCGGAACCAATGG 59.264 52.381 9.46 0.00 0.00 3.16
3095 4900 1.735571 CCTTACGAACCGGAACCAATG 59.264 52.381 9.46 0.00 0.00 2.82
3096 4901 1.947212 GCCTTACGAACCGGAACCAAT 60.947 52.381 9.46 0.00 0.00 3.16
3097 4902 0.603439 GCCTTACGAACCGGAACCAA 60.603 55.000 9.46 0.00 0.00 3.67
3098 4903 1.004679 GCCTTACGAACCGGAACCA 60.005 57.895 9.46 0.00 0.00 3.67
3099 4904 1.742880 GGCCTTACGAACCGGAACC 60.743 63.158 9.46 0.00 0.00 3.62
3100 4905 1.004679 TGGCCTTACGAACCGGAAC 60.005 57.895 9.46 0.00 0.00 3.62
3101 4906 1.294138 CTGGCCTTACGAACCGGAA 59.706 57.895 9.46 0.00 30.92 4.30
3102 4907 2.652095 CCTGGCCTTACGAACCGGA 61.652 63.158 9.46 0.00 30.92 5.14
3103 4908 2.125269 CCTGGCCTTACGAACCGG 60.125 66.667 3.32 0.00 0.00 5.28
3104 4909 2.125269 CCCTGGCCTTACGAACCG 60.125 66.667 3.32 0.00 0.00 4.44
3105 4910 2.271173 CCCCTGGCCTTACGAACC 59.729 66.667 3.32 0.00 0.00 3.62
3106 4911 2.271173 CCCCCTGGCCTTACGAAC 59.729 66.667 3.32 0.00 0.00 3.95
3121 4926 4.115199 ATGAAGTCCGGCAGGCCC 62.115 66.667 0.00 0.00 37.47 5.80
3122 4927 2.825836 CATGAAGTCCGGCAGGCC 60.826 66.667 0.00 0.00 37.47 5.19
3123 4928 2.825836 CCATGAAGTCCGGCAGGC 60.826 66.667 0.00 0.00 37.47 4.85
3124 4929 2.124570 CCCATGAAGTCCGGCAGG 60.125 66.667 0.00 0.00 39.46 4.85
3125 4930 2.124570 CCCCATGAAGTCCGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
3126 4931 3.727258 CCCCCATGAAGTCCGGCA 61.727 66.667 0.00 0.00 0.00 5.69
3141 4946 4.376170 AACCGGGACCAATGCCCC 62.376 66.667 6.32 0.00 42.92 5.80
3142 4947 2.754254 GAACCGGGACCAATGCCC 60.754 66.667 6.32 0.00 42.41 5.36
3143 4948 2.524951 TACGAACCGGGACCAATGCC 62.525 60.000 6.32 0.00 0.00 4.40
3144 4949 0.463116 ATACGAACCGGGACCAATGC 60.463 55.000 6.32 0.00 0.00 3.56
3145 4950 1.295792 CATACGAACCGGGACCAATG 58.704 55.000 6.32 0.00 0.00 2.82
3146 4951 0.179468 CCATACGAACCGGGACCAAT 59.821 55.000 6.32 0.00 0.00 3.16
3147 4952 1.597989 CCATACGAACCGGGACCAA 59.402 57.895 6.32 0.00 0.00 3.67
3148 4953 3.021473 GCCATACGAACCGGGACCA 62.021 63.158 6.32 0.00 0.00 4.02
3149 4954 2.202974 GCCATACGAACCGGGACC 60.203 66.667 6.32 0.00 0.00 4.46
3150 4955 2.202974 GGCCATACGAACCGGGAC 60.203 66.667 6.32 0.00 0.00 4.46
3151 4956 3.472726 GGGCCATACGAACCGGGA 61.473 66.667 6.32 0.00 0.00 5.14
3152 4957 4.557385 GGGGCCATACGAACCGGG 62.557 72.222 6.32 0.00 0.00 5.73
3153 4958 2.546114 AAAGGGGCCATACGAACCGG 62.546 60.000 4.39 0.00 0.00 5.28
3154 4959 1.078001 AAAGGGGCCATACGAACCG 60.078 57.895 4.39 0.00 0.00 4.44
3155 4960 0.323087 ACAAAGGGGCCATACGAACC 60.323 55.000 4.39 0.00 0.00 3.62
3156 4961 1.471287 GAACAAAGGGGCCATACGAAC 59.529 52.381 4.39 0.00 0.00 3.95
3157 4962 1.614850 GGAACAAAGGGGCCATACGAA 60.615 52.381 4.39 0.00 0.00 3.85
3158 4963 0.034863 GGAACAAAGGGGCCATACGA 60.035 55.000 4.39 0.00 0.00 3.43
3159 4964 1.035385 GGGAACAAAGGGGCCATACG 61.035 60.000 4.39 0.00 0.00 3.06
3160 4965 1.035385 CGGGAACAAAGGGGCCATAC 61.035 60.000 4.39 0.00 0.00 2.39
3161 4966 1.208844 TCGGGAACAAAGGGGCCATA 61.209 55.000 4.39 0.00 0.00 2.74
3162 4967 1.874299 ATCGGGAACAAAGGGGCCAT 61.874 55.000 4.39 0.00 0.00 4.40
3163 4968 2.087857 AATCGGGAACAAAGGGGCCA 62.088 55.000 4.39 0.00 0.00 5.36
3164 4969 1.304962 AATCGGGAACAAAGGGGCC 60.305 57.895 0.00 0.00 0.00 5.80
3165 4970 1.604147 CCAATCGGGAACAAAGGGGC 61.604 60.000 0.00 0.00 40.01 5.80
3166 4971 0.251608 ACCAATCGGGAACAAAGGGG 60.252 55.000 0.00 0.00 41.15 4.79
3167 4972 2.365582 CTACCAATCGGGAACAAAGGG 58.634 52.381 0.00 0.00 41.15 3.95
3168 4973 2.026636 TCCTACCAATCGGGAACAAAGG 60.027 50.000 0.00 0.00 41.15 3.11
3169 4974 3.007635 GTCCTACCAATCGGGAACAAAG 58.992 50.000 0.00 0.00 41.15 2.77
3170 4975 2.613474 CGTCCTACCAATCGGGAACAAA 60.613 50.000 0.00 0.00 41.15 2.83
3171 4976 1.066716 CGTCCTACCAATCGGGAACAA 60.067 52.381 0.00 0.00 41.15 2.83
3172 4977 0.533491 CGTCCTACCAATCGGGAACA 59.467 55.000 0.00 0.00 41.15 3.18
3173 4978 0.819582 TCGTCCTACCAATCGGGAAC 59.180 55.000 0.00 0.00 41.15 3.62
3174 4979 1.205417 GTTCGTCCTACCAATCGGGAA 59.795 52.381 0.00 0.00 41.15 3.97
3175 4980 0.819582 GTTCGTCCTACCAATCGGGA 59.180 55.000 0.00 0.00 41.15 5.14
3176 4981 0.179092 GGTTCGTCCTACCAATCGGG 60.179 60.000 0.00 0.00 44.81 5.14
3177 4982 0.526954 CGGTTCGTCCTACCAATCGG 60.527 60.000 0.00 0.00 35.31 4.18
3178 4983 0.526954 CCGGTTCGTCCTACCAATCG 60.527 60.000 0.00 0.00 35.31 3.34
3179 4984 0.179092 CCCGGTTCGTCCTACCAATC 60.179 60.000 0.00 0.00 35.31 2.67
3180 4985 0.615544 TCCCGGTTCGTCCTACCAAT 60.616 55.000 0.00 0.00 35.31 3.16
3181 4986 1.228831 TCCCGGTTCGTCCTACCAA 60.229 57.895 0.00 0.00 35.31 3.67
3182 4987 1.978617 GTCCCGGTTCGTCCTACCA 60.979 63.158 0.00 0.00 35.31 3.25
3183 4988 2.714991 GGTCCCGGTTCGTCCTACC 61.715 68.421 0.00 0.00 0.00 3.18
3184 4989 1.535204 TTGGTCCCGGTTCGTCCTAC 61.535 60.000 0.00 0.00 0.00 3.18
3185 4990 0.615544 ATTGGTCCCGGTTCGTCCTA 60.616 55.000 0.00 0.00 0.00 2.94
3186 4991 1.916777 ATTGGTCCCGGTTCGTCCT 60.917 57.895 0.00 0.00 0.00 3.85
3187 4992 1.743995 CATTGGTCCCGGTTCGTCC 60.744 63.158 0.00 0.00 0.00 4.79
3188 4993 1.743995 CCATTGGTCCCGGTTCGTC 60.744 63.158 0.00 0.00 0.00 4.20
3189 4994 2.349755 CCATTGGTCCCGGTTCGT 59.650 61.111 0.00 0.00 0.00 3.85
3190 4995 2.437716 CCCATTGGTCCCGGTTCG 60.438 66.667 0.00 0.00 0.00 3.95
3191 4996 2.754254 GCCCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 0.00 3.62
3192 4997 4.376170 GGCCCATTGGTCCCGGTT 62.376 66.667 0.00 0.00 0.00 4.44
3194 4999 4.506255 GAGGCCCATTGGTCCCGG 62.506 72.222 0.00 0.00 36.69 5.73
3195 5000 3.727258 TGAGGCCCATTGGTCCCG 61.727 66.667 0.00 0.00 36.69 5.14
3196 5001 2.043953 GTGAGGCCCATTGGTCCC 60.044 66.667 0.00 0.25 36.69 4.46
3197 5002 0.681243 GAAGTGAGGCCCATTGGTCC 60.681 60.000 0.00 0.00 36.69 4.46
3198 5003 0.329596 AGAAGTGAGGCCCATTGGTC 59.670 55.000 0.00 0.00 36.05 4.02
3199 5004 0.038744 CAGAAGTGAGGCCCATTGGT 59.961 55.000 0.00 0.00 0.00 3.67
3200 5005 0.682209 CCAGAAGTGAGGCCCATTGG 60.682 60.000 0.00 0.00 0.00 3.16
3201 5006 1.318158 GCCAGAAGTGAGGCCCATTG 61.318 60.000 0.00 0.00 45.18 2.82
3202 5007 1.000396 GCCAGAAGTGAGGCCCATT 60.000 57.895 0.00 0.00 45.18 3.16
3203 5008 2.679716 GCCAGAAGTGAGGCCCAT 59.320 61.111 0.00 0.00 45.18 4.00
3208 5013 0.607489 CAAGTGGGCCAGAAGTGAGG 60.607 60.000 6.40 0.00 0.00 3.86
3209 5014 0.109342 ACAAGTGGGCCAGAAGTGAG 59.891 55.000 6.40 0.00 0.00 3.51
3210 5015 0.550914 AACAAGTGGGCCAGAAGTGA 59.449 50.000 6.40 0.00 0.00 3.41
3211 5016 0.670162 CAACAAGTGGGCCAGAAGTG 59.330 55.000 6.40 5.21 0.00 3.16
3212 5017 0.468029 CCAACAAGTGGGCCAGAAGT 60.468 55.000 6.40 1.97 44.64 3.01
3213 5018 2.344535 CCAACAAGTGGGCCAGAAG 58.655 57.895 6.40 1.19 44.64 2.85
3214 5019 4.597032 CCAACAAGTGGGCCAGAA 57.403 55.556 6.40 0.00 44.64 3.02
3222 5027 2.249844 ACTACGTTCCCCAACAAGTG 57.750 50.000 0.00 0.00 30.67 3.16
3223 5028 4.628963 ATTACTACGTTCCCCAACAAGT 57.371 40.909 0.00 0.00 34.39 3.16
3278 5086 2.549563 CCCTCTCGTTGCTATGCATCAT 60.550 50.000 0.19 0.00 38.76 2.45
3398 5206 1.588082 GGAGGTGCCGTAGTTTCGA 59.412 57.895 0.00 0.00 0.00 3.71
3565 5373 1.062886 CCTCCACCATAGTCCTCCTCA 60.063 57.143 0.00 0.00 0.00 3.86
3587 5395 1.300971 ATTAGCTGTGTGCAGTGCCG 61.301 55.000 13.72 0.00 45.94 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.