Multiple sequence alignment - TraesCS3B01G487700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G487700 chr3B 100.000 4714 0 0 1 4714 733747682 733752395 0.000000e+00 8706.0
1 TraesCS3B01G487700 chr3B 91.228 57 4 1 1677 1733 765004360 765004305 5.060000e-10 76.8
2 TraesCS3B01G487700 chr3D 91.985 3269 163 53 553 3786 552878264 552881468 0.000000e+00 4494.0
3 TraesCS3B01G487700 chr3D 88.448 554 32 7 1 554 552877702 552878223 1.430000e-179 640.0
4 TraesCS3B01G487700 chr3D 91.690 361 28 1 3331 3689 552885440 552885800 2.530000e-137 499.0
5 TraesCS3B01G487700 chr3D 89.958 239 19 3 4044 4282 552923090 552923323 2.130000e-78 303.0
6 TraesCS3B01G487700 chr3D 82.738 336 41 10 3979 4303 552881797 552882126 2.780000e-72 283.0
7 TraesCS3B01G487700 chr3D 92.361 144 9 2 3918 4059 552922931 552923074 2.220000e-48 204.0
8 TraesCS3B01G487700 chr3D 93.893 131 7 1 3787 3917 552922740 552922869 3.720000e-46 196.0
9 TraesCS3B01G487700 chr3D 86.813 91 10 2 4524 4612 552885239 552885329 3.000000e-17 100.0
10 TraesCS3B01G487700 chr3D 91.071 56 5 0 1674 1729 574917627 574917682 5.060000e-10 76.8
11 TraesCS3B01G487700 chr3A 87.656 1928 130 55 553 2428 689131821 689133692 0.000000e+00 2143.0
12 TraesCS3B01G487700 chr3A 95.223 1298 59 3 2501 3797 689133855 689135150 0.000000e+00 2050.0
13 TraesCS3B01G487700 chr3A 90.017 591 53 6 3198 3786 689140702 689141288 0.000000e+00 760.0
14 TraesCS3B01G487700 chr3A 89.775 577 45 6 3214 3783 689137105 689137674 0.000000e+00 726.0
15 TraesCS3B01G487700 chr3A 88.406 552 41 6 1 552 689131249 689131777 1.110000e-180 643.0
16 TraesCS3B01G487700 chr3A 89.973 369 28 8 3918 4282 689137969 689138332 7.140000e-128 468.0
17 TraesCS3B01G487700 chr3A 88.562 306 22 6 3979 4282 689142902 689143196 4.490000e-95 359.0
18 TraesCS3B01G487700 chr3A 92.093 215 17 0 2918 3132 689136742 689136956 2.130000e-78 303.0
19 TraesCS3B01G487700 chr3A 84.000 200 26 5 4106 4303 689135859 689136054 2.240000e-43 187.0
20 TraesCS3B01G487700 chr3A 92.366 131 9 1 3787 3917 689137779 689137908 8.060000e-43 185.0
21 TraesCS3B01G487700 chr3A 85.938 128 17 1 4527 4653 689136160 689136287 8.230000e-28 135.0
22 TraesCS3B01G487700 chr3A 92.453 53 4 0 1677 1729 710701139 710701087 5.060000e-10 76.8
23 TraesCS3B01G487700 chr7A 84.211 190 30 0 1281 1470 226753037 226753226 8.060000e-43 185.0
24 TraesCS3B01G487700 chr7D 83.684 190 31 0 1281 1470 214348717 214348906 3.750000e-41 180.0
25 TraesCS3B01G487700 chr7D 75.397 252 43 16 257 498 614754725 614754483 2.320000e-18 104.0
26 TraesCS3B01G487700 chr7D 74.494 247 54 9 257 498 14408639 14408881 1.080000e-16 99.0
27 TraesCS3B01G487700 chr7B 82.915 199 34 0 1281 1479 186820199 186820001 3.750000e-41 180.0
28 TraesCS3B01G487700 chr2B 79.775 267 29 11 559 824 180429251 180429009 2.260000e-38 171.0
29 TraesCS3B01G487700 chr2B 87.395 119 13 2 1383 1500 91257538 91257655 8.230000e-28 135.0
30 TraesCS3B01G487700 chr5D 85.625 160 21 1 678 837 215480764 215480921 2.920000e-37 167.0
31 TraesCS3B01G487700 chr5D 74.101 278 59 11 228 498 32741717 32741988 8.350000e-18 102.0
32 TraesCS3B01G487700 chr1B 77.239 268 39 17 1276 1526 559097207 559096945 2.290000e-28 137.0
33 TraesCS3B01G487700 chr2A 83.562 146 20 4 1383 1526 59557840 59557697 2.960000e-27 134.0
34 TraesCS3B01G487700 chr2D 82.877 146 21 4 1383 1526 58777783 58777926 1.380000e-25 128.0
35 TraesCS3B01G487700 chr4B 74.275 276 59 11 229 498 5579999 5580268 6.450000e-19 106.0
36 TraesCS3B01G487700 chr6A 75.100 249 47 14 257 498 30910005 30910245 8.350000e-18 102.0
37 TraesCS3B01G487700 chr6A 90.000 60 5 1 1677 1736 33542126 33542068 5.060000e-10 76.8
38 TraesCS3B01G487700 chr4A 73.913 276 60 9 229 498 688505488 688505219 3.000000e-17 100.0
39 TraesCS3B01G487700 chr4A 73.358 274 65 8 229 498 731640987 731640718 1.400000e-15 95.3
40 TraesCS3B01G487700 chr6D 88.889 63 6 1 1674 1736 28999348 28999409 5.060000e-10 76.8
41 TraesCS3B01G487700 chr6D 89.474 57 5 1 1677 1733 28942204 28942149 2.350000e-08 71.3
42 TraesCS3B01G487700 chr6B 92.453 53 4 0 1677 1729 60863934 60863882 5.060000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G487700 chr3B 733747682 733752395 4713 False 8706.000000 8706 100.000000 1 4714 1 chr3B.!!$F1 4713
1 TraesCS3B01G487700 chr3D 552877702 552885800 8098 False 1203.200000 4494 88.334800 1 4612 5 chr3D.!!$F2 4611
2 TraesCS3B01G487700 chr3D 552922740 552923323 583 False 234.333333 303 92.070667 3787 4282 3 chr3D.!!$F3 495
3 TraesCS3B01G487700 chr3A 689131249 689143196 11947 False 723.545455 2143 89.455364 1 4653 11 chr3A.!!$F1 4652

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
522 523 0.031817 TAAGGGGAAGGGGTAGACCG 60.032 60.0 0.0 0.0 41.6 4.79 F
1595 1681 0.035458 AGGTTCCACGGCAAGAAGAG 59.965 55.0 0.0 0.0 0.0 2.85 F
2116 2224 0.034616 CTTCTCCCCGATCATGCTCC 59.965 60.0 0.0 0.0 0.0 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1615 1701 0.179936 CCCTCCAGGAATCTCTGCAC 59.820 60.0 0.00 0.0 38.24 4.57 R
2432 2550 0.336048 AGGGCCAGGCAATGTAATGT 59.664 50.0 15.19 0.0 0.00 2.71 R
4072 4444 0.311790 CCATTTCGCTGCACAAGTGT 59.688 50.0 0.00 0.0 37.67 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.329267 TCTTGCTCAGACCAGAAGGAA 58.671 47.619 0.00 0.00 38.69 3.36
138 139 1.001048 GCAACTTTCAGCATGTCAGCA 60.001 47.619 0.00 0.00 37.40 4.41
139 140 2.544277 GCAACTTTCAGCATGTCAGCAA 60.544 45.455 0.00 0.00 37.40 3.91
144 145 4.763793 ACTTTCAGCATGTCAGCAATAGTT 59.236 37.500 0.00 0.00 37.40 2.24
151 152 4.670992 GCATGTCAGCAATAGTTGTCACAG 60.671 45.833 0.00 0.00 28.50 3.66
154 155 4.065088 GTCAGCAATAGTTGTCACAGGAA 58.935 43.478 0.00 0.00 0.00 3.36
164 165 1.001974 TGTCACAGGAACTTCATCCCG 59.998 52.381 0.00 0.00 40.59 5.14
175 176 5.473504 GGAACTTCATCCCGCATTAACATAT 59.526 40.000 0.00 0.00 33.05 1.78
176 177 6.653320 GGAACTTCATCCCGCATTAACATATA 59.347 38.462 0.00 0.00 33.05 0.86
179 180 8.948631 ACTTCATCCCGCATTAACATATATAG 57.051 34.615 0.00 0.00 0.00 1.31
186 187 7.979537 TCCCGCATTAACATATATAGCTAAGTG 59.020 37.037 0.00 0.00 0.00 3.16
253 254 5.816682 TCCCCTTCCAGAATTTTCTTAGTC 58.183 41.667 0.00 0.00 34.74 2.59
254 255 4.950475 CCCCTTCCAGAATTTTCTTAGTCC 59.050 45.833 0.00 0.00 34.74 3.85
255 256 4.950475 CCCTTCCAGAATTTTCTTAGTCCC 59.050 45.833 0.00 0.00 34.74 4.46
256 257 5.516591 CCCTTCCAGAATTTTCTTAGTCCCA 60.517 44.000 0.00 0.00 34.74 4.37
257 258 5.649831 CCTTCCAGAATTTTCTTAGTCCCAG 59.350 44.000 0.00 0.00 34.74 4.45
258 259 6.448369 TTCCAGAATTTTCTTAGTCCCAGA 57.552 37.500 0.00 0.00 34.74 3.86
259 260 6.642733 TCCAGAATTTTCTTAGTCCCAGAT 57.357 37.500 0.00 0.00 34.74 2.90
260 261 6.653989 TCCAGAATTTTCTTAGTCCCAGATC 58.346 40.000 0.00 0.00 34.74 2.75
261 262 6.445139 TCCAGAATTTTCTTAGTCCCAGATCT 59.555 38.462 0.00 0.00 34.74 2.75
262 263 6.765512 CCAGAATTTTCTTAGTCCCAGATCTC 59.234 42.308 0.00 0.00 34.74 2.75
263 264 7.365473 CCAGAATTTTCTTAGTCCCAGATCTCT 60.365 40.741 0.00 0.00 34.74 3.10
264 265 7.495279 CAGAATTTTCTTAGTCCCAGATCTCTG 59.505 40.741 0.00 0.00 38.39 3.35
265 266 4.744795 TTTCTTAGTCCCAGATCTCTGC 57.255 45.455 0.00 0.00 42.47 4.26
305 306 8.246871 CCTCTTTTCTCCAAATATCTTTCAACC 58.753 37.037 0.00 0.00 0.00 3.77
363 364 7.536855 ACATCAGAAATCAAATTCTTCTCAGC 58.463 34.615 0.00 0.00 37.56 4.26
522 523 0.031817 TAAGGGGAAGGGGTAGACCG 60.032 60.000 0.00 0.00 41.60 4.79
577 621 8.720562 TCAACTCATCGCACCAATTTATATATG 58.279 33.333 0.00 0.00 0.00 1.78
667 711 7.743116 AAAGGAAAGGGGTTAAAAGAAGAAA 57.257 32.000 0.00 0.00 0.00 2.52
701 745 3.060602 GTGTGTCGAGGAAGGAAGAAAG 58.939 50.000 0.00 0.00 0.00 2.62
770 814 7.522374 CACGAAGGAAAAGAATTAGAAGAAGG 58.478 38.462 0.00 0.00 0.00 3.46
841 885 7.751768 ATAAATTTGGTTCTCTATGCCTAGC 57.248 36.000 0.00 0.00 0.00 3.42
844 888 2.320781 TGGTTCTCTATGCCTAGCCTC 58.679 52.381 0.00 0.00 0.00 4.70
845 889 1.271102 GGTTCTCTATGCCTAGCCTCG 59.729 57.143 0.00 0.00 0.00 4.63
846 890 2.231529 GTTCTCTATGCCTAGCCTCGA 58.768 52.381 0.00 0.00 0.00 4.04
850 907 1.228894 TATGCCTAGCCTCGAGGGG 60.229 63.158 32.06 24.62 34.35 4.79
915 974 3.751698 GCGGTTTCTTTATCTCACCAACT 59.248 43.478 0.00 0.00 0.00 3.16
977 1038 1.599797 CGTGTTGGAGTTGGACCCC 60.600 63.158 0.00 0.00 0.00 4.95
1048 1109 2.143419 ATCGTCCTGGAGATGGCCC 61.143 63.158 0.00 0.00 31.83 5.80
1160 1221 1.215647 GGACACCTCAGGCACGTAG 59.784 63.158 0.00 0.00 0.00 3.51
1162 1223 1.171308 GACACCTCAGGCACGTAGTA 58.829 55.000 0.00 0.00 41.61 1.82
1163 1224 1.132643 GACACCTCAGGCACGTAGTAG 59.867 57.143 0.00 0.00 41.61 2.57
1164 1225 1.271762 ACACCTCAGGCACGTAGTAGA 60.272 52.381 0.00 0.00 41.61 2.59
1165 1226 1.132643 CACCTCAGGCACGTAGTAGAC 59.867 57.143 0.00 0.00 41.61 2.59
1166 1227 1.271762 ACCTCAGGCACGTAGTAGACA 60.272 52.381 0.00 0.00 41.61 3.41
1167 1228 2.025155 CCTCAGGCACGTAGTAGACAT 58.975 52.381 0.00 0.00 41.61 3.06
1168 1229 3.211865 CCTCAGGCACGTAGTAGACATA 58.788 50.000 0.00 0.00 41.61 2.29
1169 1230 3.821600 CCTCAGGCACGTAGTAGACATAT 59.178 47.826 0.00 0.00 41.61 1.78
1170 1231 5.001874 CCTCAGGCACGTAGTAGACATATA 58.998 45.833 0.00 0.00 41.61 0.86
1171 1232 5.648526 CCTCAGGCACGTAGTAGACATATAT 59.351 44.000 0.00 0.00 41.61 0.86
1172 1233 6.822170 CCTCAGGCACGTAGTAGACATATATA 59.178 42.308 0.00 0.00 41.61 0.86
1173 1234 7.201626 CCTCAGGCACGTAGTAGACATATATAC 60.202 44.444 0.00 0.00 41.61 1.47
1174 1235 7.392418 TCAGGCACGTAGTAGACATATATACT 58.608 38.462 0.00 0.00 41.61 2.12
1175 1236 7.548427 TCAGGCACGTAGTAGACATATATACTC 59.452 40.741 0.00 0.00 41.61 2.59
1176 1237 6.822676 AGGCACGTAGTAGACATATATACTCC 59.177 42.308 0.00 0.00 41.61 3.85
1177 1238 6.822676 GGCACGTAGTAGACATATATACTCCT 59.177 42.308 0.00 0.00 41.61 3.69
1178 1239 7.984050 GGCACGTAGTAGACATATATACTCCTA 59.016 40.741 0.00 0.00 41.61 2.94
1179 1240 9.545105 GCACGTAGTAGACATATATACTCCTAT 57.455 37.037 0.00 0.00 41.61 2.57
1197 1261 5.787380 TCCTATGATATATCCATGCATCGC 58.213 41.667 10.25 0.00 0.00 4.58
1198 1262 5.305128 TCCTATGATATATCCATGCATCGCA 59.695 40.000 10.25 0.00 44.86 5.10
1199 1263 5.638234 CCTATGATATATCCATGCATCGCAG 59.362 44.000 10.25 0.00 43.65 5.18
1241 1313 1.313772 CCAGATCGATCCTGACTCGT 58.686 55.000 21.66 0.00 37.40 4.18
1269 1355 1.007038 GTAGGCGTTCACGGTGTCA 60.007 57.895 8.17 0.00 40.23 3.58
1533 1619 1.301401 CGTCAACTTCAAGGGCGGA 60.301 57.895 0.00 0.00 0.00 5.54
1595 1681 0.035458 AGGTTCCACGGCAAGAAGAG 59.965 55.000 0.00 0.00 0.00 2.85
1597 1683 1.302511 TTCCACGGCAAGAAGAGGC 60.303 57.895 0.00 0.00 0.00 4.70
1602 1688 2.436824 GGCAAGAAGAGGCGGTCC 60.437 66.667 0.00 0.00 0.00 4.46
1629 1715 2.169789 CCGCGTGCAGAGATTCCTG 61.170 63.158 4.92 0.00 37.23 3.86
1729 1815 4.181010 CCCCCGCCATCTCAGGTG 62.181 72.222 0.00 0.00 38.90 4.00
1773 1866 5.630661 TTTCTTCTGTTTGAACCGTTTGA 57.369 34.783 0.00 0.00 0.00 2.69
1774 1867 4.875544 TCTTCTGTTTGAACCGTTTGAG 57.124 40.909 0.00 0.00 0.00 3.02
1775 1868 4.258543 TCTTCTGTTTGAACCGTTTGAGT 58.741 39.130 0.00 0.00 0.00 3.41
1776 1869 4.698304 TCTTCTGTTTGAACCGTTTGAGTT 59.302 37.500 0.00 0.00 0.00 3.01
1780 1873 4.477780 TGTTTGAACCGTTTGAGTTGTTC 58.522 39.130 0.00 0.00 38.03 3.18
1781 1874 3.768468 TTGAACCGTTTGAGTTGTTCC 57.232 42.857 0.00 0.00 37.01 3.62
1782 1875 1.666700 TGAACCGTTTGAGTTGTTCCG 59.333 47.619 0.00 0.00 37.01 4.30
1812 1910 1.286880 CCGTCCGTCCGTAACAACT 59.713 57.895 0.00 0.00 0.00 3.16
1886 1985 3.581101 TCAAGGGATCCAATCGAGATCT 58.419 45.455 15.23 0.00 40.07 2.75
1919 2019 8.888579 TCGAACAAAGTAAGAAGAAGAAGAAT 57.111 30.769 0.00 0.00 0.00 2.40
1920 2020 8.979574 TCGAACAAAGTAAGAAGAAGAAGAATC 58.020 33.333 0.00 0.00 0.00 2.52
1921 2021 7.947299 CGAACAAAGTAAGAAGAAGAAGAATCG 59.053 37.037 0.00 0.00 0.00 3.34
1923 2023 6.147985 ACAAAGTAAGAAGAAGAAGAATCGGC 59.852 38.462 0.00 0.00 0.00 5.54
1925 2025 6.777213 AGTAAGAAGAAGAAGAATCGGCTA 57.223 37.500 0.00 0.00 0.00 3.93
1926 2026 6.566141 AGTAAGAAGAAGAAGAATCGGCTAC 58.434 40.000 0.00 0.00 0.00 3.58
1927 2027 5.669164 AAGAAGAAGAAGAATCGGCTACT 57.331 39.130 0.00 0.00 0.00 2.57
1929 2029 3.172229 AGAAGAAGAATCGGCTACTGC 57.828 47.619 0.00 0.00 38.76 4.40
1934 2034 3.702045 AGAAGAATCGGCTACTGCTACTT 59.298 43.478 0.00 0.00 39.59 2.24
1935 2035 3.444703 AGAATCGGCTACTGCTACTTG 57.555 47.619 0.00 0.00 39.59 3.16
1937 2037 3.447586 AGAATCGGCTACTGCTACTTGAA 59.552 43.478 0.00 0.00 39.59 2.69
1939 2039 3.887621 TCGGCTACTGCTACTTGAATT 57.112 42.857 0.00 0.00 39.59 2.17
1940 2040 4.994907 TCGGCTACTGCTACTTGAATTA 57.005 40.909 0.00 0.00 39.59 1.40
1941 2041 5.531122 TCGGCTACTGCTACTTGAATTAT 57.469 39.130 0.00 0.00 39.59 1.28
1942 2042 5.529791 TCGGCTACTGCTACTTGAATTATC 58.470 41.667 0.00 0.00 39.59 1.75
1943 2043 5.302059 TCGGCTACTGCTACTTGAATTATCT 59.698 40.000 0.00 0.00 39.59 1.98
1944 2044 5.403766 CGGCTACTGCTACTTGAATTATCTG 59.596 44.000 0.00 0.00 39.59 2.90
1946 2046 6.763610 GGCTACTGCTACTTGAATTATCTGTT 59.236 38.462 0.00 0.00 39.59 3.16
1947 2047 7.281100 GGCTACTGCTACTTGAATTATCTGTTT 59.719 37.037 0.00 0.00 39.59 2.83
1948 2048 8.119226 GCTACTGCTACTTGAATTATCTGTTTG 58.881 37.037 0.00 0.00 36.03 2.93
1950 2050 8.798859 ACTGCTACTTGAATTATCTGTTTGAT 57.201 30.769 0.00 0.00 39.11 2.57
1951 2051 8.887717 ACTGCTACTTGAATTATCTGTTTGATC 58.112 33.333 0.00 0.00 36.65 2.92
1952 2052 7.909267 TGCTACTTGAATTATCTGTTTGATCG 58.091 34.615 0.00 0.00 36.65 3.69
1953 2053 7.549134 TGCTACTTGAATTATCTGTTTGATCGT 59.451 33.333 0.00 0.00 36.65 3.73
1975 2075 0.042535 CGTTGTGATTTGACGTGCGT 60.043 50.000 0.00 0.00 32.52 5.24
1976 2076 1.385038 GTTGTGATTTGACGTGCGTG 58.615 50.000 0.67 0.00 0.00 5.34
1977 2077 0.316607 TTGTGATTTGACGTGCGTGC 60.317 50.000 0.67 0.00 0.00 5.34
1978 2078 1.788203 GTGATTTGACGTGCGTGCG 60.788 57.895 0.67 0.00 37.94 5.34
1996 2104 4.031878 CGTGCGGTTAACATTTTGTTTGTT 59.968 37.500 8.10 0.00 41.45 2.83
1997 2105 5.444745 CGTGCGGTTAACATTTTGTTTGTTT 60.445 36.000 8.10 0.00 41.45 2.83
1998 2106 5.730342 GTGCGGTTAACATTTTGTTTGTTTG 59.270 36.000 8.10 0.00 41.45 2.93
1999 2107 5.408604 TGCGGTTAACATTTTGTTTGTTTGT 59.591 32.000 8.10 0.00 41.45 2.83
2000 2108 6.073222 TGCGGTTAACATTTTGTTTGTTTGTT 60.073 30.769 8.10 0.00 41.45 2.83
2001 2109 6.797513 GCGGTTAACATTTTGTTTGTTTGTTT 59.202 30.769 8.10 0.00 41.45 2.83
2002 2110 7.201190 GCGGTTAACATTTTGTTTGTTTGTTTG 60.201 33.333 8.10 0.00 41.45 2.93
2003 2111 7.798982 CGGTTAACATTTTGTTTGTTTGTTTGT 59.201 29.630 8.10 0.00 41.45 2.83
2004 2112 9.452065 GGTTAACATTTTGTTTGTTTGTTTGTT 57.548 25.926 8.10 0.00 41.45 2.83
2006 2114 6.983059 ACATTTTGTTTGTTTGTTTGTTGC 57.017 29.167 0.00 0.00 0.00 4.17
2007 2115 6.498304 ACATTTTGTTTGTTTGTTTGTTGCA 58.502 28.000 0.00 0.00 0.00 4.08
2008 2116 6.974622 ACATTTTGTTTGTTTGTTTGTTGCAA 59.025 26.923 0.00 0.00 0.00 4.08
2009 2117 7.489113 ACATTTTGTTTGTTTGTTTGTTGCAAA 59.511 25.926 0.00 0.00 33.96 3.68
2116 2224 0.034616 CTTCTCCCCGATCATGCTCC 59.965 60.000 0.00 0.00 0.00 4.70
2126 2234 0.179062 ATCATGCTCCTCTGGTTCGC 60.179 55.000 0.00 0.00 0.00 4.70
2127 2235 1.817099 CATGCTCCTCTGGTTCGCC 60.817 63.158 0.00 0.00 37.92 5.54
2130 2238 2.896443 CTCCTCTGGTTCGCCTCC 59.104 66.667 0.00 0.00 38.36 4.30
2138 2246 3.195698 GTTCGCCTCCATCGCCAC 61.196 66.667 0.00 0.00 0.00 5.01
2139 2247 4.467084 TTCGCCTCCATCGCCACC 62.467 66.667 0.00 0.00 0.00 4.61
2296 2413 3.504906 AGGTTGCTGAAATCTGTGTCATG 59.495 43.478 0.00 0.00 0.00 3.07
2311 2428 7.587629 TCTGTGTCATGTTTCTCAATTTCATC 58.412 34.615 0.00 0.00 0.00 2.92
2335 2453 6.720012 AACACAAAAATGTTGGACAAACTC 57.280 33.333 0.00 0.00 41.29 3.01
2353 2471 7.643579 ACAAACTCTGCTAAATCTGAAGTTTC 58.356 34.615 0.00 0.00 0.00 2.78
2361 2479 6.311445 TGCTAAATCTGAAGTTTCTGATCGTC 59.689 38.462 12.67 5.90 42.61 4.20
2431 2549 7.726033 ACAAGAGATCAATTCAGGTACTACT 57.274 36.000 0.00 0.00 36.02 2.57
2432 2550 8.824756 ACAAGAGATCAATTCAGGTACTACTA 57.175 34.615 0.00 0.00 36.02 1.82
2435 2553 9.427821 AAGAGATCAATTCAGGTACTACTACAT 57.572 33.333 0.00 0.00 36.02 2.29
2443 2561 8.888579 ATTCAGGTACTACTACATTACATTGC 57.111 34.615 0.00 0.00 36.02 3.56
2444 2562 6.812998 TCAGGTACTACTACATTACATTGCC 58.187 40.000 0.00 0.00 36.02 4.52
2445 2563 6.610020 TCAGGTACTACTACATTACATTGCCT 59.390 38.462 0.00 0.00 36.02 4.75
2446 2564 6.701841 CAGGTACTACTACATTACATTGCCTG 59.298 42.308 0.00 0.00 36.02 4.85
2447 2565 5.989777 GGTACTACTACATTACATTGCCTGG 59.010 44.000 0.00 0.00 0.00 4.45
2448 2566 4.451900 ACTACTACATTACATTGCCTGGC 58.548 43.478 12.87 12.87 0.00 4.85
2449 2567 2.654863 ACTACATTACATTGCCTGGCC 58.345 47.619 17.53 0.00 0.00 5.36
2450 2568 1.956477 CTACATTACATTGCCTGGCCC 59.044 52.381 17.53 0.00 0.00 5.80
2451 2569 0.336048 ACATTACATTGCCTGGCCCT 59.664 50.000 17.53 0.00 0.00 5.19
2452 2570 0.748450 CATTACATTGCCTGGCCCTG 59.252 55.000 17.53 15.47 0.00 4.45
2453 2571 1.044790 ATTACATTGCCTGGCCCTGC 61.045 55.000 17.53 2.83 0.00 4.85
2454 2572 3.993614 TACATTGCCTGGCCCTGCG 62.994 63.158 17.53 2.67 0.00 5.18
2462 2580 1.174712 CCTGGCCCTGCGGATTAATG 61.175 60.000 0.00 0.00 0.00 1.90
2588 2815 1.521681 GATCAAGAACCCCGCCGAG 60.522 63.158 0.00 0.00 0.00 4.63
2645 2872 0.888736 TGTTCTGGCCCATGTTCGTG 60.889 55.000 0.00 0.00 0.00 4.35
2738 2965 0.607217 TCGTGCTCGACTACTTCCCA 60.607 55.000 6.80 0.00 41.35 4.37
2741 2968 1.139095 GCTCGACTACTTCCCACGG 59.861 63.158 0.00 0.00 0.00 4.94
2829 3056 1.140589 ATGCTCTTCTGCGTCCTCG 59.859 57.895 0.00 0.00 40.37 4.63
2879 3106 2.270850 GGCCATGCCTTCGGTGTA 59.729 61.111 0.00 0.00 46.69 2.90
2882 3109 2.173669 CCATGCCTTCGGTGTAGCG 61.174 63.158 0.00 0.00 0.00 4.26
2885 3112 2.047560 GCCTTCGGTGTAGCGGTT 60.048 61.111 3.51 0.00 0.00 4.44
3027 3254 1.273327 TGAGCTCGCTGATGAACAAGA 59.727 47.619 9.64 0.00 0.00 3.02
3144 3371 3.112205 GCGGGCCACATGATCTCCT 62.112 63.158 4.39 0.00 0.00 3.69
3215 3442 1.270305 TGCTTCTTCTTCACGGACCTG 60.270 52.381 0.00 0.00 0.00 4.00
3500 3727 2.592861 GAGGCCGCCATGATGGAC 60.593 66.667 17.22 5.73 40.96 4.02
3596 3823 0.652592 GATGGTTCAGGCGATTCGTG 59.347 55.000 8.03 0.00 0.00 4.35
3686 3913 0.396435 ACAAGACGATGCAGGTTGGA 59.604 50.000 0.00 0.00 0.00 3.53
3771 4000 5.183713 CCACACATTTCTGAGCCTAAATTCA 59.816 40.000 0.00 0.00 0.00 2.57
3775 4004 6.810182 CACATTTCTGAGCCTAAATTCAAAGG 59.190 38.462 0.00 0.00 35.86 3.11
3776 4005 6.721208 ACATTTCTGAGCCTAAATTCAAAGGA 59.279 34.615 5.80 0.00 34.58 3.36
3836 4145 2.167487 ACGGCAACTTTTCCATTTGTGT 59.833 40.909 0.00 0.00 0.00 3.72
3843 4152 6.332630 CAACTTTTCCATTTGTGTTCACTCT 58.667 36.000 4.59 0.00 0.00 3.24
3846 4155 7.035612 ACTTTTCCATTTGTGTTCACTCTTTC 58.964 34.615 4.59 0.00 0.00 2.62
3850 4159 5.528690 TCCATTTGTGTTCACTCTTTCTCAG 59.471 40.000 4.59 0.00 0.00 3.35
3858 4167 5.129485 TGTTCACTCTTTCTCAGTTTCCTCT 59.871 40.000 0.00 0.00 0.00 3.69
3871 4180 7.398618 TCTCAGTTTCCTCTCATATCTCAAACT 59.601 37.037 0.00 0.00 33.84 2.66
3876 4185 8.353684 GTTTCCTCTCATATCTCAAACTCGATA 58.646 37.037 0.00 0.00 0.00 2.92
3877 4186 8.465273 TTCCTCTCATATCTCAAACTCGATAA 57.535 34.615 0.00 0.00 0.00 1.75
3878 4187 8.642935 TCCTCTCATATCTCAAACTCGATAAT 57.357 34.615 0.00 0.00 0.00 1.28
3879 4188 9.083422 TCCTCTCATATCTCAAACTCGATAATT 57.917 33.333 0.00 0.00 0.00 1.40
3884 4193 9.261180 TCATATCTCAAACTCGATAATTTCCAC 57.739 33.333 0.00 0.00 0.00 4.02
3885 4194 9.045223 CATATCTCAAACTCGATAATTTCCACA 57.955 33.333 0.00 0.00 0.00 4.17
3886 4195 6.721571 TCTCAAACTCGATAATTTCCACAC 57.278 37.500 0.00 0.00 0.00 3.82
3887 4196 6.227522 TCTCAAACTCGATAATTTCCACACA 58.772 36.000 0.00 0.00 0.00 3.72
3888 4197 6.368791 TCTCAAACTCGATAATTTCCACACAG 59.631 38.462 0.00 0.00 0.00 3.66
3889 4198 6.227522 TCAAACTCGATAATTTCCACACAGA 58.772 36.000 0.00 0.00 0.00 3.41
3890 4199 6.878923 TCAAACTCGATAATTTCCACACAGAT 59.121 34.615 0.00 0.00 0.00 2.90
3891 4200 7.390440 TCAAACTCGATAATTTCCACACAGATT 59.610 33.333 0.00 0.00 0.00 2.40
3892 4201 7.687941 AACTCGATAATTTCCACACAGATTT 57.312 32.000 0.00 0.00 0.00 2.17
3893 4202 7.687941 ACTCGATAATTTCCACACAGATTTT 57.312 32.000 0.00 0.00 0.00 1.82
3906 4215 2.640826 ACAGATTTTCGGTTACCCCAGA 59.359 45.455 0.00 0.00 0.00 3.86
3927 4262 2.212869 AAAATATCGCGCTCGGTACA 57.787 45.000 5.56 0.00 33.66 2.90
3932 4267 0.441145 ATCGCGCTCGGTACAAAAAC 59.559 50.000 5.56 0.00 36.13 2.43
3941 4278 1.404843 GGTACAAAAACCCTGCCACA 58.595 50.000 0.00 0.00 33.02 4.17
3952 4289 1.893808 CTGCCACACACACACCTCC 60.894 63.158 0.00 0.00 0.00 4.30
3957 4294 1.140052 CCACACACACACCTCCACTAA 59.860 52.381 0.00 0.00 0.00 2.24
3961 4298 3.882888 ACACACACACCTCCACTAATTTG 59.117 43.478 0.00 0.00 0.00 2.32
3964 4301 1.468520 CACACCTCCACTAATTTGGCG 59.531 52.381 0.00 0.00 36.48 5.69
3972 4309 1.750778 CACTAATTTGGCGGCATTCCT 59.249 47.619 14.32 0.13 0.00 3.36
3976 4313 2.071778 ATTTGGCGGCATTCCTATGT 57.928 45.000 14.32 0.00 34.12 2.29
4000 4370 4.866486 GTGGCTAATTTTTCTGCATTCCTG 59.134 41.667 0.00 0.00 0.00 3.86
4002 4372 5.011943 TGGCTAATTTTTCTGCATTCCTGTT 59.988 36.000 0.00 0.00 0.00 3.16
4006 4376 1.533625 TTTCTGCATTCCTGTTCGGG 58.466 50.000 0.00 0.00 0.00 5.14
4007 4377 0.960364 TTCTGCATTCCTGTTCGGGC 60.960 55.000 0.00 0.00 0.00 6.13
4009 4379 1.651240 CTGCATTCCTGTTCGGGCTG 61.651 60.000 0.00 0.00 0.00 4.85
4010 4380 3.056313 GCATTCCTGTTCGGGCTGC 62.056 63.158 8.48 8.48 34.82 5.25
4011 4381 2.044946 ATTCCTGTTCGGGCTGCC 60.045 61.111 11.05 11.05 0.00 4.85
4012 4382 2.606587 ATTCCTGTTCGGGCTGCCT 61.607 57.895 19.68 0.00 0.00 4.75
4015 4385 2.629656 CCTGTTCGGGCTGCCTTTG 61.630 63.158 19.68 9.12 0.00 2.77
4016 4386 1.600636 CTGTTCGGGCTGCCTTTGA 60.601 57.895 19.68 11.41 0.00 2.69
4019 4389 0.733150 GTTCGGGCTGCCTTTGATAC 59.267 55.000 19.68 10.77 0.00 2.24
4031 4401 4.142708 TGCCTTTGATACAAGTATGCAACG 60.143 41.667 0.00 1.29 0.00 4.10
4032 4402 4.730613 GCCTTTGATACAAGTATGCAACGG 60.731 45.833 15.42 15.42 32.25 4.44
4036 4406 2.018542 TACAAGTATGCAACGGGAGC 57.981 50.000 0.00 0.00 0.00 4.70
4042 4412 0.179048 TATGCAACGGGAGCTCATGG 60.179 55.000 17.19 6.20 0.00 3.66
4048 4420 1.794714 ACGGGAGCTCATGGTAGATT 58.205 50.000 17.19 0.00 0.00 2.40
4053 4425 4.636249 GGGAGCTCATGGTAGATTTACTG 58.364 47.826 17.19 0.00 0.00 2.74
4072 4444 4.787551 ACTGAAGTTGGTTGGTCATTACA 58.212 39.130 0.00 0.00 0.00 2.41
4092 4471 0.592637 CACTTGTGCAGCGAAATGGA 59.407 50.000 0.00 0.00 0.00 3.41
4094 4473 1.680735 ACTTGTGCAGCGAAATGGAAA 59.319 42.857 0.00 0.00 0.00 3.13
4113 4798 1.981256 ATGGGGTTGTGAGTTGTGAC 58.019 50.000 0.00 0.00 0.00 3.67
4136 4821 3.287222 GGTCATGCATTTAGCTGGGTAA 58.713 45.455 0.00 0.00 45.94 2.85
4144 4829 4.275936 GCATTTAGCTGGGTAATTCGTCAT 59.724 41.667 0.00 0.00 41.15 3.06
4145 4830 5.751680 CATTTAGCTGGGTAATTCGTCATG 58.248 41.667 0.00 0.00 0.00 3.07
4152 4837 5.559427 TGGGTAATTCGTCATGACATTTG 57.441 39.130 24.93 9.22 0.00 2.32
4155 4840 3.508744 AATTCGTCATGACATTTGGGC 57.491 42.857 24.93 0.00 0.00 5.36
4156 4841 1.173043 TTCGTCATGACATTTGGGCC 58.827 50.000 24.93 0.00 0.00 5.80
4160 4845 2.045438 ATGACATTTGGGCCGCGA 60.045 55.556 8.23 0.00 0.00 5.87
4165 4850 2.033448 ATTTGGGCCGCGAGTGAA 59.967 55.556 8.23 0.00 0.00 3.18
4166 4851 1.378514 ATTTGGGCCGCGAGTGAAT 60.379 52.632 8.23 0.00 0.00 2.57
4167 4852 1.376609 ATTTGGGCCGCGAGTGAATC 61.377 55.000 8.23 0.00 0.00 2.52
4170 4855 2.038269 GGGCCGCGAGTGAATCAAA 61.038 57.895 8.23 0.00 0.00 2.69
4171 4856 1.425428 GGCCGCGAGTGAATCAAAG 59.575 57.895 8.23 0.00 0.00 2.77
4175 4860 2.604614 GCCGCGAGTGAATCAAAGTTTT 60.605 45.455 8.23 0.00 0.00 2.43
4176 4861 3.628017 CCGCGAGTGAATCAAAGTTTTT 58.372 40.909 8.23 0.00 0.00 1.94
4177 4862 4.778904 CCGCGAGTGAATCAAAGTTTTTA 58.221 39.130 8.23 0.00 0.00 1.52
4178 4863 4.611366 CCGCGAGTGAATCAAAGTTTTTAC 59.389 41.667 8.23 0.00 0.00 2.01
4179 4864 5.440685 CGCGAGTGAATCAAAGTTTTTACT 58.559 37.500 0.00 0.00 0.00 2.24
4180 4865 5.336990 CGCGAGTGAATCAAAGTTTTTACTG 59.663 40.000 0.00 0.00 0.00 2.74
4181 4866 5.625311 GCGAGTGAATCAAAGTTTTTACTGG 59.375 40.000 0.00 0.00 0.00 4.00
4182 4867 6.725246 CGAGTGAATCAAAGTTTTTACTGGT 58.275 36.000 0.00 0.00 0.00 4.00
4183 4868 6.851330 CGAGTGAATCAAAGTTTTTACTGGTC 59.149 38.462 0.00 0.00 0.00 4.02
4184 4869 7.466725 CGAGTGAATCAAAGTTTTTACTGGTCA 60.467 37.037 0.00 0.00 0.00 4.02
4185 4870 8.237811 AGTGAATCAAAGTTTTTACTGGTCAT 57.762 30.769 0.00 0.00 0.00 3.06
4186 4871 9.349713 AGTGAATCAAAGTTTTTACTGGTCATA 57.650 29.630 0.00 0.00 0.00 2.15
4190 4875 6.607689 TCAAAGTTTTTACTGGTCATATGCG 58.392 36.000 0.00 0.00 0.00 4.73
4191 4876 6.428465 TCAAAGTTTTTACTGGTCATATGCGA 59.572 34.615 0.00 0.00 0.00 5.10
4192 4877 7.120579 TCAAAGTTTTTACTGGTCATATGCGAT 59.879 33.333 0.00 0.00 0.00 4.58
4193 4878 6.604735 AGTTTTTACTGGTCATATGCGATC 57.395 37.500 0.00 0.00 0.00 3.69
4194 4879 6.112734 AGTTTTTACTGGTCATATGCGATCA 58.887 36.000 0.00 0.00 0.00 2.92
4196 4881 6.544038 TTTTACTGGTCATATGCGATCATG 57.456 37.500 0.00 0.00 34.22 3.07
4197 4882 2.420642 ACTGGTCATATGCGATCATGC 58.579 47.619 0.00 0.00 34.22 4.06
4198 4883 1.736126 CTGGTCATATGCGATCATGCC 59.264 52.381 0.00 0.00 34.22 4.40
4212 4897 6.082338 GCGATCATGCCTTATGTAAAAGATG 58.918 40.000 0.00 0.00 38.01 2.90
4216 4901 7.350744 TCATGCCTTATGTAAAAGATGCATT 57.649 32.000 0.00 0.00 34.29 3.56
4310 4996 7.618019 ACTGGGTGTTGAGTCATATATATGT 57.382 36.000 19.78 4.32 35.26 2.29
4311 4997 8.034313 ACTGGGTGTTGAGTCATATATATGTT 57.966 34.615 19.78 11.18 35.26 2.71
4312 4998 8.494433 ACTGGGTGTTGAGTCATATATATGTTT 58.506 33.333 19.78 10.88 35.26 2.83
4313 4999 9.342308 CTGGGTGTTGAGTCATATATATGTTTT 57.658 33.333 19.78 8.75 35.26 2.43
4314 5000 9.693739 TGGGTGTTGAGTCATATATATGTTTTT 57.306 29.630 19.78 6.66 35.26 1.94
4331 5017 4.988744 TTTTTGCGGGGTGAGTCA 57.011 50.000 0.00 0.00 0.00 3.41
4332 5018 3.430473 TTTTTGCGGGGTGAGTCAT 57.570 47.368 0.00 0.00 0.00 3.06
4333 5019 2.570415 TTTTTGCGGGGTGAGTCATA 57.430 45.000 0.00 0.00 0.00 2.15
4334 5020 2.799126 TTTTGCGGGGTGAGTCATAT 57.201 45.000 0.00 0.00 0.00 1.78
4335 5021 3.916359 TTTTGCGGGGTGAGTCATATA 57.084 42.857 0.00 0.00 0.00 0.86
4336 5022 4.431416 TTTTGCGGGGTGAGTCATATAT 57.569 40.909 0.00 0.00 0.00 0.86
4337 5023 5.554437 TTTTGCGGGGTGAGTCATATATA 57.446 39.130 0.00 0.00 0.00 0.86
4347 5033 5.479306 GTGAGTCATATATATGTTGGCCGT 58.521 41.667 19.78 1.64 35.26 5.68
4350 5036 6.209788 TGAGTCATATATATGTTGGCCGTACA 59.790 38.462 19.78 12.34 35.26 2.90
4358 5044 0.242555 GTTGGCCGTACATTTGTGGG 59.757 55.000 0.00 0.00 0.00 4.61
4359 8047 0.178987 TTGGCCGTACATTTGTGGGT 60.179 50.000 0.00 0.00 0.00 4.51
4363 8051 2.004733 GCCGTACATTTGTGGGTAGTC 58.995 52.381 0.00 0.00 0.00 2.59
4364 8052 2.613474 GCCGTACATTTGTGGGTAGTCA 60.613 50.000 0.00 0.00 0.00 3.41
4379 8067 5.594725 TGGGTAGTCAACAAAATAGCAACAA 59.405 36.000 0.00 0.00 0.00 2.83
4389 8077 6.815089 ACAAAATAGCAACAAATCAACTCCA 58.185 32.000 0.00 0.00 0.00 3.86
4398 8086 6.096001 GCAACAAATCAACTCCAGGATCTATT 59.904 38.462 0.00 0.00 0.00 1.73
4415 8118 7.698628 GGATCTATTCCACTAGCAAAAAGAAC 58.301 38.462 0.00 0.00 44.74 3.01
4416 8119 7.336931 GGATCTATTCCACTAGCAAAAAGAACA 59.663 37.037 0.00 0.00 44.74 3.18
4435 8138 8.658499 AAGAACATTATAAGTGATCGGTTACC 57.342 34.615 0.00 0.00 0.00 2.85
4438 8141 6.880484 ACATTATAAGTGATCGGTTACCACA 58.120 36.000 1.13 0.00 33.53 4.17
4439 8142 7.332557 ACATTATAAGTGATCGGTTACCACAA 58.667 34.615 1.13 0.00 33.53 3.33
4440 8143 7.825270 ACATTATAAGTGATCGGTTACCACAAA 59.175 33.333 1.13 0.00 33.53 2.83
4441 8144 7.599630 TTATAAGTGATCGGTTACCACAAAC 57.400 36.000 1.13 0.00 33.53 2.93
4442 8145 3.764237 AGTGATCGGTTACCACAAACT 57.236 42.857 1.13 0.00 33.53 2.66
4443 8146 4.877378 AGTGATCGGTTACCACAAACTA 57.123 40.909 1.13 0.00 33.53 2.24
4444 8147 4.817517 AGTGATCGGTTACCACAAACTAG 58.182 43.478 1.13 0.00 33.53 2.57
4445 8148 3.930848 GTGATCGGTTACCACAAACTAGG 59.069 47.826 1.13 0.00 0.00 3.02
4446 8149 3.055675 TGATCGGTTACCACAAACTAGGG 60.056 47.826 1.13 0.00 0.00 3.53
4447 8150 1.624813 TCGGTTACCACAAACTAGGGG 59.375 52.381 1.13 0.00 0.00 4.79
4448 8151 1.348696 CGGTTACCACAAACTAGGGGT 59.651 52.381 1.13 0.00 37.43 4.95
4449 8152 2.786777 GGTTACCACAAACTAGGGGTG 58.213 52.381 0.00 0.00 34.88 4.61
4452 8155 1.304134 CCACAAACTAGGGGTGGGC 60.304 63.158 17.35 0.00 46.51 5.36
4453 8156 1.458486 CACAAACTAGGGGTGGGCA 59.542 57.895 0.00 0.00 0.00 5.36
4454 8157 0.039618 CACAAACTAGGGGTGGGCAT 59.960 55.000 0.00 0.00 0.00 4.40
4455 8158 1.283613 CACAAACTAGGGGTGGGCATA 59.716 52.381 0.00 0.00 0.00 3.14
4456 8159 1.997040 ACAAACTAGGGGTGGGCATAA 59.003 47.619 0.00 0.00 0.00 1.90
4457 8160 2.380590 ACAAACTAGGGGTGGGCATAAA 59.619 45.455 0.00 0.00 0.00 1.40
4458 8161 3.181416 ACAAACTAGGGGTGGGCATAAAA 60.181 43.478 0.00 0.00 0.00 1.52
4459 8162 3.835395 CAAACTAGGGGTGGGCATAAAAA 59.165 43.478 0.00 0.00 0.00 1.94
4460 8163 3.095912 ACTAGGGGTGGGCATAAAAAC 57.904 47.619 0.00 0.00 0.00 2.43
4461 8164 2.291996 ACTAGGGGTGGGCATAAAAACC 60.292 50.000 0.00 0.00 0.00 3.27
4462 8165 0.613572 AGGGGTGGGCATAAAAACCG 60.614 55.000 0.00 0.00 33.24 4.44
4463 8166 0.612453 GGGGTGGGCATAAAAACCGA 60.612 55.000 0.00 0.00 33.24 4.69
4464 8167 0.528924 GGGTGGGCATAAAAACCGAC 59.471 55.000 0.00 0.00 34.22 4.79
4465 8168 1.249407 GGTGGGCATAAAAACCGACA 58.751 50.000 0.00 0.00 36.47 4.35
4466 8169 1.614413 GGTGGGCATAAAAACCGACAA 59.386 47.619 0.00 0.00 36.47 3.18
4467 8170 2.036089 GGTGGGCATAAAAACCGACAAA 59.964 45.455 0.00 0.00 36.47 2.83
4468 8171 3.054166 GTGGGCATAAAAACCGACAAAC 58.946 45.455 0.00 0.00 35.01 2.93
4469 8172 2.036089 TGGGCATAAAAACCGACAAACC 59.964 45.455 0.00 0.00 0.00 3.27
4470 8173 2.321263 GGCATAAAAACCGACAAACCG 58.679 47.619 0.00 0.00 0.00 4.44
4471 8174 2.030981 GGCATAAAAACCGACAAACCGA 60.031 45.455 0.00 0.00 0.00 4.69
4472 8175 3.550436 GGCATAAAAACCGACAAACCGAA 60.550 43.478 0.00 0.00 0.00 4.30
4473 8176 3.422876 GCATAAAAACCGACAAACCGAAC 59.577 43.478 0.00 0.00 0.00 3.95
4474 8177 4.599047 CATAAAAACCGACAAACCGAACA 58.401 39.130 0.00 0.00 0.00 3.18
4475 8178 2.547913 AAAACCGACAAACCGAACAC 57.452 45.000 0.00 0.00 0.00 3.32
4476 8179 0.734309 AAACCGACAAACCGAACACC 59.266 50.000 0.00 0.00 0.00 4.16
4477 8180 1.430707 AACCGACAAACCGAACACCG 61.431 55.000 0.00 0.00 38.18 4.94
4496 8199 3.045492 GCCGAAGCCGAAACCGAA 61.045 61.111 0.00 0.00 38.22 4.30
4497 8200 2.609759 GCCGAAGCCGAAACCGAAA 61.610 57.895 0.00 0.00 38.22 3.46
4498 8201 1.943293 CCGAAGCCGAAACCGAAAA 59.057 52.632 0.00 0.00 38.22 2.29
4499 8202 0.308376 CCGAAGCCGAAACCGAAAAA 59.692 50.000 0.00 0.00 38.22 1.94
4523 8226 6.993786 ACCGAATTTTTGGTTTTTGTCAAT 57.006 29.167 0.00 0.00 42.36 2.57
4525 8228 7.911343 ACCGAATTTTTGGTTTTTGTCAATAC 58.089 30.769 0.00 0.00 42.36 1.89
4537 8240 8.460831 GTTTTTGTCAATACACAAACTGACTT 57.539 30.769 11.19 0.00 46.01 3.01
4548 8251 6.010219 ACACAAACTGACTTAATTAGGGCAT 58.990 36.000 3.22 0.00 0.00 4.40
4602 8305 1.239296 GGCAACCGGGTACTTCAACC 61.239 60.000 6.32 0.00 38.94 3.77
4612 8315 2.931969 GGTACTTCAACCCGGTATTTCG 59.068 50.000 0.00 0.00 33.02 3.46
4613 8316 3.368323 GGTACTTCAACCCGGTATTTCGA 60.368 47.826 0.00 0.00 33.02 3.71
4614 8317 2.968675 ACTTCAACCCGGTATTTCGAG 58.031 47.619 0.00 0.00 0.00 4.04
4615 8318 2.301009 ACTTCAACCCGGTATTTCGAGT 59.699 45.455 0.00 0.00 0.00 4.18
4621 13306 2.564062 ACCCGGTATTTCGAGTCTCAAA 59.436 45.455 0.00 0.86 0.00 2.69
4639 13324 8.316946 AGTCTCAAATTAGATCATCACAAGACA 58.683 33.333 0.00 0.00 32.66 3.41
4641 13326 8.939929 TCTCAAATTAGATCATCACAAGACAAC 58.060 33.333 0.00 0.00 0.00 3.32
4644 13329 1.995484 AGATCATCACAAGACAACGCG 59.005 47.619 3.53 3.53 0.00 6.01
4660 13345 4.359971 AACGCGGGTTGGAATAAATTAC 57.640 40.909 17.90 0.00 34.37 1.89
4663 13348 4.399934 ACGCGGGTTGGAATAAATTACAAT 59.600 37.500 12.47 0.00 42.16 2.71
4664 13349 5.105675 ACGCGGGTTGGAATAAATTACAATT 60.106 36.000 12.47 0.00 42.16 2.32
4665 13350 5.231147 CGCGGGTTGGAATAAATTACAATTG 59.769 40.000 3.24 3.24 42.16 2.32
4667 15275 6.475402 GCGGGTTGGAATAAATTACAATTGAG 59.525 38.462 13.59 0.00 42.16 3.02
4689 15297 8.462143 TGAGATTAAATTAGACGAACACTGTC 57.538 34.615 0.00 0.00 36.60 3.51
4691 15299 8.467402 AGATTAAATTAGACGAACACTGTCAG 57.533 34.615 0.00 0.00 38.83 3.51
4696 15304 3.099267 AGACGAACACTGTCAGGAAAG 57.901 47.619 4.53 0.00 38.83 2.62
4698 15306 3.053455 GACGAACACTGTCAGGAAAGAG 58.947 50.000 4.53 0.00 36.37 2.85
4699 15307 2.693591 ACGAACACTGTCAGGAAAGAGA 59.306 45.455 4.53 0.00 0.00 3.10
4700 15308 3.243569 ACGAACACTGTCAGGAAAGAGAG 60.244 47.826 4.53 0.00 35.23 3.20
4701 15309 3.004839 CGAACACTGTCAGGAAAGAGAGA 59.995 47.826 4.53 0.00 33.48 3.10
4702 15310 4.499865 CGAACACTGTCAGGAAAGAGAGAA 60.500 45.833 4.53 0.00 33.48 2.87
4703 15311 5.359194 AACACTGTCAGGAAAGAGAGAAA 57.641 39.130 4.53 0.00 33.48 2.52
4704 15312 4.698575 ACACTGTCAGGAAAGAGAGAAAC 58.301 43.478 4.53 0.00 33.48 2.78
4706 15314 4.509600 CACTGTCAGGAAAGAGAGAAACAC 59.490 45.833 4.53 0.00 33.48 3.32
4707 15315 4.162320 ACTGTCAGGAAAGAGAGAAACACA 59.838 41.667 4.53 0.00 33.48 3.72
4708 15316 5.163258 ACTGTCAGGAAAGAGAGAAACACAT 60.163 40.000 4.53 0.00 33.48 3.21
4710 15318 5.760253 TGTCAGGAAAGAGAGAAACACATTC 59.240 40.000 0.00 0.00 38.39 2.67
4711 15319 5.760253 GTCAGGAAAGAGAGAAACACATTCA 59.240 40.000 0.00 0.00 40.72 2.57
4713 15321 6.828273 TCAGGAAAGAGAGAAACACATTCAAA 59.172 34.615 0.00 0.00 40.72 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 9.339492 CTGAGCAAGAAAAATTGAATTCTACTC 57.661 33.333 7.05 15.87 38.36 2.59
34 35 3.136443 TCCTTCTGGTCTGAGCAAGAAAA 59.864 43.478 11.07 2.95 36.40 2.29
57 58 5.463051 AGGAGAACATTCATTTGGATCCT 57.537 39.130 14.23 0.00 0.00 3.24
102 103 5.695851 AAGTTGCCACTGACTTTCATAAG 57.304 39.130 0.00 0.00 32.43 1.73
128 129 3.189080 TGTGACAACTATTGCTGACATGC 59.811 43.478 0.00 0.00 0.00 4.06
138 139 5.940470 GGATGAAGTTCCTGTGACAACTATT 59.060 40.000 0.00 0.00 32.36 1.73
139 140 5.491982 GGATGAAGTTCCTGTGACAACTAT 58.508 41.667 0.00 0.00 32.36 2.12
144 145 1.001974 CGGGATGAAGTTCCTGTGACA 59.998 52.381 0.00 0.00 37.38 3.58
151 152 3.013921 TGTTAATGCGGGATGAAGTTCC 58.986 45.455 0.00 0.00 34.83 3.62
154 155 7.495934 GCTATATATGTTAATGCGGGATGAAGT 59.504 37.037 0.00 0.00 0.00 3.01
175 176 6.290294 AGGACGAAAAACCACTTAGCTATA 57.710 37.500 0.00 0.00 0.00 1.31
176 177 5.161943 AGGACGAAAAACCACTTAGCTAT 57.838 39.130 0.00 0.00 0.00 2.97
179 180 2.483106 GGAGGACGAAAAACCACTTAGC 59.517 50.000 0.00 0.00 0.00 3.09
186 187 1.071857 ACCAGAGGAGGACGAAAAACC 59.928 52.381 0.00 0.00 0.00 3.27
194 195 0.827368 CTAGCCAACCAGAGGAGGAC 59.173 60.000 0.00 0.00 0.00 3.85
253 254 0.179026 CCATGTGGCAGAGATCTGGG 60.179 60.000 11.63 0.00 43.94 4.45
254 255 3.398694 CCATGTGGCAGAGATCTGG 57.601 57.895 11.63 0.00 43.94 3.86
265 266 1.915141 AAGAGGAAACTGCCATGTGG 58.085 50.000 0.00 0.00 44.43 4.17
305 306 8.464404 TCAAAGAATGAAAGATATTCAAGCTGG 58.536 33.333 0.00 0.00 37.08 4.85
380 381 7.700022 AAGAGAGCTGCTTTTAGAATTTGAT 57.300 32.000 2.53 0.00 0.00 2.57
427 428 6.002704 AGTGAAAGGATGGAGCATCAATATC 58.997 40.000 0.00 0.00 42.13 1.63
495 496 3.394645 ACCCCTTCCCCTTATAACTCTG 58.605 50.000 0.00 0.00 0.00 3.35
559 603 9.936759 TTCATAGACATATATAAATTGGTGCGA 57.063 29.630 0.00 0.00 0.00 5.10
577 621 7.585573 GCGACTCATTGATTTCAATTCATAGAC 59.414 37.037 3.06 0.68 43.48 2.59
600 644 2.203788 ACCCACTCCTTGAGGCGA 60.204 61.111 0.00 0.00 33.35 5.54
642 686 7.743116 TTCTTCTTTTAACCCCTTTCCTTTT 57.257 32.000 0.00 0.00 0.00 2.27
667 711 3.331150 TCGACACACAAGCGGAATTTAT 58.669 40.909 0.00 0.00 0.00 1.40
680 724 2.814280 TTCTTCCTTCCTCGACACAC 57.186 50.000 0.00 0.00 0.00 3.82
701 745 9.688091 GGGGGATATATTCCTTCTTTAATTCTC 57.312 37.037 10.05 0.00 44.75 2.87
719 763 4.668787 AGGGCTCATAATAGGGGGATAT 57.331 45.455 0.00 0.00 0.00 1.63
723 767 2.307098 CTCAAGGGCTCATAATAGGGGG 59.693 54.545 0.00 0.00 0.00 5.40
724 768 2.290577 GCTCAAGGGCTCATAATAGGGG 60.291 54.545 0.00 0.00 0.00 4.79
780 824 9.349713 TCTAATTTACTTCTTTCTTTCTTGCCA 57.650 29.630 0.00 0.00 0.00 4.92
818 862 6.062095 GGCTAGGCATAGAGAACCAAATTTA 58.938 40.000 10.11 0.00 0.00 1.40
821 865 3.718956 AGGCTAGGCATAGAGAACCAAAT 59.281 43.478 19.70 0.00 0.00 2.32
837 881 2.108970 ACTTAAACCCCTCGAGGCTAG 58.891 52.381 26.87 18.19 0.00 3.42
839 883 1.003233 CAACTTAAACCCCTCGAGGCT 59.997 52.381 26.87 10.11 0.00 4.58
840 884 1.002773 TCAACTTAAACCCCTCGAGGC 59.997 52.381 26.87 0.00 0.00 4.70
841 885 3.412237 TTCAACTTAAACCCCTCGAGG 57.588 47.619 25.36 25.36 0.00 4.63
844 888 4.320935 CCATGTTTCAACTTAAACCCCTCG 60.321 45.833 0.00 0.00 38.35 4.63
845 889 4.560716 GCCATGTTTCAACTTAAACCCCTC 60.561 45.833 0.00 0.00 38.35 4.30
846 890 3.323691 GCCATGTTTCAACTTAAACCCCT 59.676 43.478 0.00 0.00 38.35 4.79
850 907 6.859420 ATTTGGCCATGTTTCAACTTAAAC 57.141 33.333 6.09 0.00 39.35 2.01
934 995 3.862845 CCAAAGGTGCATTTATAAACCGC 59.137 43.478 12.44 12.44 37.78 5.68
937 998 5.099575 CGTCCCAAAGGTGCATTTATAAAC 58.900 41.667 0.00 0.00 0.00 2.01
977 1038 4.292178 GGGGCCGATCGAGCTCAG 62.292 72.222 23.76 6.88 29.87 3.35
1090 1151 4.309950 GGTCCGACCACCGCTTGT 62.310 66.667 13.05 0.00 38.42 3.16
1170 1231 8.747471 CGATGCATGGATATATCATAGGAGTAT 58.253 37.037 14.60 3.36 0.00 2.12
1171 1232 7.309438 GCGATGCATGGATATATCATAGGAGTA 60.309 40.741 13.46 0.00 0.00 2.59
1172 1233 6.518032 GCGATGCATGGATATATCATAGGAGT 60.518 42.308 13.46 0.00 0.00 3.85
1173 1234 5.868258 GCGATGCATGGATATATCATAGGAG 59.132 44.000 13.46 0.65 0.00 3.69
1174 1235 5.305128 TGCGATGCATGGATATATCATAGGA 59.695 40.000 13.46 4.88 31.71 2.94
1175 1236 5.544650 TGCGATGCATGGATATATCATAGG 58.455 41.667 13.46 5.90 31.71 2.57
1176 1237 6.453092 TCTGCGATGCATGGATATATCATAG 58.547 40.000 13.46 4.44 38.13 2.23
1177 1238 6.409524 TCTGCGATGCATGGATATATCATA 57.590 37.500 13.46 3.47 38.13 2.15
1178 1239 5.286267 TCTGCGATGCATGGATATATCAT 57.714 39.130 13.46 3.87 38.13 2.45
1179 1240 4.741321 TCTGCGATGCATGGATATATCA 57.259 40.909 13.46 0.00 38.13 2.15
1180 1241 4.385146 CGATCTGCGATGCATGGATATATC 59.615 45.833 13.46 3.96 44.57 1.63
1181 1242 4.038402 TCGATCTGCGATGCATGGATATAT 59.962 41.667 13.46 0.00 45.59 0.86
1209 1281 2.570442 GATCTGGTCGAGAGTTGGTC 57.430 55.000 0.00 0.00 32.80 4.02
1233 1305 3.504134 CCTACATCCATCCTACGAGTCAG 59.496 52.174 0.00 0.00 0.00 3.51
1235 1307 2.229302 GCCTACATCCATCCTACGAGTC 59.771 54.545 0.00 0.00 0.00 3.36
1236 1308 2.240279 GCCTACATCCATCCTACGAGT 58.760 52.381 0.00 0.00 0.00 4.18
1239 1311 0.959553 ACGCCTACATCCATCCTACG 59.040 55.000 0.00 0.00 0.00 3.51
1241 1313 2.364324 GTGAACGCCTACATCCATCCTA 59.636 50.000 0.00 0.00 0.00 2.94
1377 1463 1.330655 TGAGGATGCCGAGGAAGTCC 61.331 60.000 0.00 0.00 0.00 3.85
1615 1701 0.179936 CCCTCCAGGAATCTCTGCAC 59.820 60.000 0.00 0.00 38.24 4.57
1622 1708 2.203126 CGCTGCCCTCCAGGAATC 60.203 66.667 0.00 0.00 42.03 2.52
1623 1709 4.496336 GCGCTGCCCTCCAGGAAT 62.496 66.667 0.00 0.00 42.03 3.01
1713 1799 3.083349 TCACCTGAGATGGCGGGG 61.083 66.667 0.00 0.00 38.69 5.73
1716 1802 1.517257 GTCGTCACCTGAGATGGCG 60.517 63.158 0.00 0.00 46.37 5.69
1729 1815 1.007336 ATTCTGCACGTTCGGTCGTC 61.007 55.000 3.17 1.13 42.27 4.20
1767 1860 4.439776 GGAAAAATCGGAACAACTCAAACG 59.560 41.667 0.00 0.00 0.00 3.60
1773 1866 4.214758 CGGTTAGGAAAAATCGGAACAACT 59.785 41.667 0.00 0.00 0.00 3.16
1774 1867 4.023792 ACGGTTAGGAAAAATCGGAACAAC 60.024 41.667 0.00 0.00 0.00 3.32
1775 1868 4.136051 ACGGTTAGGAAAAATCGGAACAA 58.864 39.130 0.00 0.00 0.00 2.83
1776 1869 3.742385 ACGGTTAGGAAAAATCGGAACA 58.258 40.909 0.00 0.00 0.00 3.18
1780 1873 1.662122 CGGACGGTTAGGAAAAATCGG 59.338 52.381 0.00 0.00 0.00 4.18
1781 1874 2.340337 ACGGACGGTTAGGAAAAATCG 58.660 47.619 0.00 0.00 0.00 3.34
1782 1875 2.674852 GGACGGACGGTTAGGAAAAATC 59.325 50.000 0.00 0.00 0.00 2.17
1812 1910 8.906867 AGAAACAGACAAAAAGAGATCAATCAA 58.093 29.630 0.00 0.00 0.00 2.57
1886 1985 5.477607 TCTTACTTTGTTCGATCTTGGGA 57.522 39.130 0.00 0.00 0.00 4.37
1919 2019 3.887621 AATTCAAGTAGCAGTAGCCGA 57.112 42.857 0.00 0.00 43.56 5.54
1920 2020 5.403766 CAGATAATTCAAGTAGCAGTAGCCG 59.596 44.000 0.00 0.00 43.56 5.52
1921 2021 6.284459 ACAGATAATTCAAGTAGCAGTAGCC 58.716 40.000 0.00 0.00 43.56 3.93
1923 2023 9.371136 TCAAACAGATAATTCAAGTAGCAGTAG 57.629 33.333 0.00 0.00 0.00 2.57
1925 2025 8.798859 ATCAAACAGATAATTCAAGTAGCAGT 57.201 30.769 0.00 0.00 34.43 4.40
1926 2026 8.060679 CGATCAAACAGATAATTCAAGTAGCAG 58.939 37.037 0.00 0.00 37.00 4.24
1927 2027 7.549134 ACGATCAAACAGATAATTCAAGTAGCA 59.451 33.333 0.00 0.00 37.00 3.49
1934 2034 8.539674 CAACGATACGATCAAACAGATAATTCA 58.460 33.333 0.00 0.00 37.00 2.57
1935 2035 8.540492 ACAACGATACGATCAAACAGATAATTC 58.460 33.333 0.00 0.00 37.00 2.17
1937 2037 7.704899 TCACAACGATACGATCAAACAGATAAT 59.295 33.333 0.00 0.00 37.00 1.28
1939 2039 6.557110 TCACAACGATACGATCAAACAGATA 58.443 36.000 0.00 0.00 37.00 1.98
1940 2040 5.407502 TCACAACGATACGATCAAACAGAT 58.592 37.500 0.00 0.00 40.48 2.90
1941 2041 4.800784 TCACAACGATACGATCAAACAGA 58.199 39.130 0.00 0.00 0.00 3.41
1942 2042 5.702622 ATCACAACGATACGATCAAACAG 57.297 39.130 0.00 0.00 30.32 3.16
1943 2043 6.146347 TCAAATCACAACGATACGATCAAACA 59.854 34.615 0.00 0.00 32.51 2.83
1944 2044 6.461698 GTCAAATCACAACGATACGATCAAAC 59.538 38.462 0.00 0.00 32.51 2.93
1946 2046 5.220135 CGTCAAATCACAACGATACGATCAA 60.220 40.000 0.00 0.00 36.23 2.57
1947 2047 4.264380 CGTCAAATCACAACGATACGATCA 59.736 41.667 0.00 0.00 36.23 2.92
1948 2048 4.264614 ACGTCAAATCACAACGATACGATC 59.735 41.667 0.00 0.00 36.23 3.69
1950 2050 3.362534 CACGTCAAATCACAACGATACGA 59.637 43.478 0.00 0.00 36.23 3.43
1951 2051 3.645278 CACGTCAAATCACAACGATACG 58.355 45.455 0.71 0.00 38.82 3.06
1952 2052 3.404564 GCACGTCAAATCACAACGATAC 58.595 45.455 0.71 0.00 39.59 2.24
1953 2053 2.091432 CGCACGTCAAATCACAACGATA 59.909 45.455 0.71 0.00 39.59 2.92
1975 2075 5.408604 ACAAACAAACAAAATGTTAACCGCA 59.591 32.000 2.48 0.00 40.14 5.69
1976 2076 5.859557 ACAAACAAACAAAATGTTAACCGC 58.140 33.333 2.48 0.00 40.14 5.68
1977 2077 7.798982 ACAAACAAACAAACAAAATGTTAACCG 59.201 29.630 2.48 0.00 40.14 4.44
1978 2078 9.452065 AACAAACAAACAAACAAAATGTTAACC 57.548 25.926 2.48 0.00 40.14 2.85
2094 2202 0.469917 GCATGATCGGGGAGAAGGAA 59.530 55.000 0.00 0.00 0.00 3.36
2116 2224 1.227089 CGATGGAGGCGAACCAGAG 60.227 63.158 7.13 1.18 40.89 3.35
2126 2234 2.280389 CGATGGTGGCGATGGAGG 60.280 66.667 0.00 0.00 0.00 4.30
2127 2235 2.280389 CCGATGGTGGCGATGGAG 60.280 66.667 0.00 0.00 0.00 3.86
2138 2246 1.138859 TGATGTTGTAGAGGCCGATGG 59.861 52.381 0.00 0.00 0.00 3.51
2139 2247 2.602257 TGATGTTGTAGAGGCCGATG 57.398 50.000 0.00 0.00 0.00 3.84
2259 2367 2.719739 CAACCTGTGATGCAGAGGATT 58.280 47.619 16.41 5.42 46.28 3.01
2279 2396 5.049198 TGAGAAACATGACACAGATTTCAGC 60.049 40.000 0.00 0.00 32.78 4.26
2335 2453 6.312426 ACGATCAGAAACTTCAGATTTAGCAG 59.688 38.462 0.00 0.00 34.16 4.24
2353 2471 3.119673 AGCGCCTGATTATAGACGATCAG 60.120 47.826 2.29 6.41 45.58 2.90
2431 2549 1.568597 AGGGCCAGGCAATGTAATGTA 59.431 47.619 15.19 0.00 0.00 2.29
2432 2550 0.336048 AGGGCCAGGCAATGTAATGT 59.664 50.000 15.19 0.00 0.00 2.71
2435 2553 1.682005 GCAGGGCCAGGCAATGTAA 60.682 57.895 15.19 0.00 0.00 2.41
2447 2565 5.952397 ATGGTACCATTAATCCGCAGGGC 62.952 52.174 22.23 0.00 40.64 5.19
2448 2566 2.224769 ATGGTACCATTAATCCGCAGGG 60.225 50.000 22.23 0.00 40.64 4.45
2449 2567 3.140325 ATGGTACCATTAATCCGCAGG 57.860 47.619 22.23 0.00 41.41 4.85
2450 2568 5.123820 CCATTATGGTACCATTAATCCGCAG 59.876 44.000 31.72 14.93 37.82 5.18
2451 2569 5.007034 CCATTATGGTACCATTAATCCGCA 58.993 41.667 31.72 9.18 37.82 5.69
2452 2570 4.142469 GCCATTATGGTACCATTAATCCGC 60.142 45.833 31.72 22.59 40.46 5.54
2453 2571 5.007034 TGCCATTATGGTACCATTAATCCG 58.993 41.667 31.72 18.55 40.46 4.18
2454 2572 7.397192 AGAATGCCATTATGGTACCATTAATCC 59.603 37.037 31.72 17.54 40.46 3.01
2462 2580 9.515226 TTAGAATTAGAATGCCATTATGGTACC 57.485 33.333 13.28 4.43 40.46 3.34
2534 2761 3.025176 GCGTACGCGAGGATGAGC 61.025 66.667 26.17 4.32 41.33 4.26
2588 2815 2.126071 TAGAACGCCGTGCTCAGC 60.126 61.111 0.00 0.00 0.00 4.26
2762 2989 1.541310 CCTGGCCCTCGTACTTGTCA 61.541 60.000 0.00 0.00 0.00 3.58
2829 3056 1.450312 CCTGGAAGCCGATGGTGAC 60.450 63.158 0.00 0.00 0.00 3.67
2876 3103 3.556213 GCATGACCCATATAACCGCTACA 60.556 47.826 0.00 0.00 0.00 2.74
2879 3106 1.699634 AGCATGACCCATATAACCGCT 59.300 47.619 0.00 0.00 0.00 5.52
2882 3109 4.697352 GTGATGAGCATGACCCATATAACC 59.303 45.833 0.00 0.00 0.00 2.85
2885 3112 3.909364 TGGTGATGAGCATGACCCATATA 59.091 43.478 15.01 0.00 43.28 0.86
3188 3415 1.349357 GTGAAGAAGAAGCAGACCCCT 59.651 52.381 0.00 0.00 0.00 4.79
3596 3823 3.689649 GGAACCTGTACATGTGATTGACC 59.310 47.826 9.11 0.50 0.00 4.02
3721 3948 8.621286 GGCTATTACATGTTGTAAAATGCTAGT 58.379 33.333 2.30 0.00 44.84 2.57
3725 3952 6.475402 GTGGGCTATTACATGTTGTAAAATGC 59.525 38.462 2.30 4.27 44.84 3.56
3733 3962 5.581126 AATGTGTGGGCTATTACATGTTG 57.419 39.130 2.30 0.00 34.28 3.33
3745 3974 0.610232 AGGCTCAGAAATGTGTGGGC 60.610 55.000 0.00 0.00 43.86 5.36
3771 4000 3.511540 GGCTAACAAGCAAAGGATCCTTT 59.488 43.478 30.41 30.41 45.98 3.11
3775 4004 3.736126 GCATGGCTAACAAGCAAAGGATC 60.736 47.826 0.00 0.00 43.04 3.36
3776 4005 2.167075 GCATGGCTAACAAGCAAAGGAT 59.833 45.455 0.00 0.00 43.04 3.24
3783 4012 2.911819 TAAACGCATGGCTAACAAGC 57.088 45.000 0.00 0.00 40.27 4.01
3784 4013 3.376859 TGGATAAACGCATGGCTAACAAG 59.623 43.478 0.00 0.00 0.00 3.16
3785 4014 3.348119 TGGATAAACGCATGGCTAACAA 58.652 40.909 0.00 0.00 0.00 2.83
3789 4098 1.593196 GCTGGATAAACGCATGGCTA 58.407 50.000 0.00 0.00 0.00 3.93
3811 4120 0.889186 ATGGAAAAGTTGCCGTCGCT 60.889 50.000 0.00 0.00 35.36 4.93
3820 4129 6.530019 AGAGTGAACACAAATGGAAAAGTT 57.470 33.333 7.68 0.00 0.00 2.66
3821 4130 6.530019 AAGAGTGAACACAAATGGAAAAGT 57.470 33.333 7.68 0.00 0.00 2.66
3836 4145 5.363868 TGAGAGGAAACTGAGAAAGAGTGAA 59.636 40.000 0.00 0.00 44.43 3.18
3843 4152 7.724490 TGAGATATGAGAGGAAACTGAGAAA 57.276 36.000 0.00 0.00 44.43 2.52
3846 4155 7.555087 AGTTTGAGATATGAGAGGAAACTGAG 58.445 38.462 0.00 0.00 44.43 3.35
3850 4159 6.565234 TCGAGTTTGAGATATGAGAGGAAAC 58.435 40.000 0.00 0.00 0.00 2.78
3858 4167 9.261180 GTGGAAATTATCGAGTTTGAGATATGA 57.739 33.333 0.00 0.00 0.00 2.15
3871 4180 6.183360 CCGAAAATCTGTGTGGAAATTATCGA 60.183 38.462 0.00 0.00 0.00 3.59
3876 4185 5.529581 AACCGAAAATCTGTGTGGAAATT 57.470 34.783 0.00 0.00 0.00 1.82
3877 4186 5.048294 GGTAACCGAAAATCTGTGTGGAAAT 60.048 40.000 0.00 0.00 0.00 2.17
3878 4187 4.276431 GGTAACCGAAAATCTGTGTGGAAA 59.724 41.667 0.00 0.00 0.00 3.13
3879 4188 3.816523 GGTAACCGAAAATCTGTGTGGAA 59.183 43.478 0.00 0.00 0.00 3.53
3881 4190 3.824414 GGTAACCGAAAATCTGTGTGG 57.176 47.619 0.00 0.00 0.00 4.17
3912 4221 1.655099 GTTTTTGTACCGAGCGCGATA 59.345 47.619 12.10 0.00 40.82 2.92
3913 4222 0.441145 GTTTTTGTACCGAGCGCGAT 59.559 50.000 12.10 1.23 40.82 4.58
3914 4223 1.559149 GGTTTTTGTACCGAGCGCGA 61.559 55.000 12.10 0.00 40.82 5.87
3915 4224 1.154543 GGTTTTTGTACCGAGCGCG 60.155 57.895 0.00 0.00 37.24 6.86
3916 4225 1.208358 GGGTTTTTGTACCGAGCGC 59.792 57.895 0.00 0.00 39.18 5.92
3917 4226 0.515564 CAGGGTTTTTGTACCGAGCG 59.484 55.000 0.00 0.00 39.18 5.03
3927 4262 0.534873 GTGTGTGTGGCAGGGTTTTT 59.465 50.000 0.00 0.00 0.00 1.94
3932 4267 2.906897 GGTGTGTGTGTGGCAGGG 60.907 66.667 0.00 0.00 0.00 4.45
3941 4278 3.486383 CCAAATTAGTGGAGGTGTGTGT 58.514 45.455 0.00 0.00 41.65 3.72
3952 4289 1.750778 AGGAATGCCGCCAAATTAGTG 59.249 47.619 0.00 0.00 39.96 2.74
3957 4294 1.682854 CACATAGGAATGCCGCCAAAT 59.317 47.619 0.00 0.00 39.96 2.32
3961 4298 1.447317 CCACACATAGGAATGCCGCC 61.447 60.000 0.00 0.00 39.96 6.13
3964 4301 2.638480 TAGCCACACATAGGAATGCC 57.362 50.000 0.00 0.00 36.50 4.40
3972 4309 5.973899 TGCAGAAAAATTAGCCACACATA 57.026 34.783 0.00 0.00 0.00 2.29
3976 4313 4.527816 AGGAATGCAGAAAAATTAGCCACA 59.472 37.500 0.00 0.00 0.00 4.17
4000 4370 0.733150 GTATCAAAGGCAGCCCGAAC 59.267 55.000 8.22 0.99 35.76 3.95
4002 4372 0.326595 TTGTATCAAAGGCAGCCCGA 59.673 50.000 8.22 2.59 35.76 5.14
4006 4376 3.378112 TGCATACTTGTATCAAAGGCAGC 59.622 43.478 0.00 0.00 0.00 5.25
4007 4377 5.335127 GTTGCATACTTGTATCAAAGGCAG 58.665 41.667 0.00 0.00 0.00 4.85
4009 4379 4.342772 CGTTGCATACTTGTATCAAAGGC 58.657 43.478 0.00 0.00 0.00 4.35
4010 4380 4.201910 CCCGTTGCATACTTGTATCAAAGG 60.202 45.833 18.51 18.51 36.50 3.11
4011 4381 4.634004 TCCCGTTGCATACTTGTATCAAAG 59.366 41.667 0.00 8.31 0.00 2.77
4012 4382 4.580868 TCCCGTTGCATACTTGTATCAAA 58.419 39.130 0.00 0.00 0.00 2.69
4015 4385 2.544267 GCTCCCGTTGCATACTTGTATC 59.456 50.000 0.00 0.00 0.00 2.24
4016 4386 2.170607 AGCTCCCGTTGCATACTTGTAT 59.829 45.455 0.00 0.00 0.00 2.29
4019 4389 1.009829 GAGCTCCCGTTGCATACTTG 58.990 55.000 0.87 0.00 0.00 3.16
4031 4401 4.345257 TCAGTAAATCTACCATGAGCTCCC 59.655 45.833 12.15 0.00 0.00 4.30
4032 4402 5.537300 TCAGTAAATCTACCATGAGCTCC 57.463 43.478 12.15 0.00 0.00 4.70
4036 4406 7.106239 ACCAACTTCAGTAAATCTACCATGAG 58.894 38.462 0.00 0.00 0.00 2.90
4042 4412 6.708949 TGACCAACCAACTTCAGTAAATCTAC 59.291 38.462 0.00 0.00 0.00 2.59
4048 4420 6.261381 GTGTAATGACCAACCAACTTCAGTAA 59.739 38.462 0.00 0.00 0.00 2.24
4053 4425 4.578928 AGTGTGTAATGACCAACCAACTTC 59.421 41.667 0.00 0.00 0.00 3.01
4072 4444 0.311790 CCATTTCGCTGCACAAGTGT 59.688 50.000 0.00 0.00 37.67 3.55
4092 4471 2.693074 GTCACAACTCACAACCCCATTT 59.307 45.455 0.00 0.00 0.00 2.32
4094 4473 1.813862 CGTCACAACTCACAACCCCAT 60.814 52.381 0.00 0.00 0.00 4.00
4113 4798 0.664761 CCAGCTAAATGCATGACCCG 59.335 55.000 0.00 0.00 45.94 5.28
4136 4821 1.750778 GGCCCAAATGTCATGACGAAT 59.249 47.619 20.54 7.09 0.00 3.34
4144 4829 2.745884 CTCGCGGCCCAAATGTCA 60.746 61.111 6.13 0.00 0.00 3.58
4145 4830 2.746277 ACTCGCGGCCCAAATGTC 60.746 61.111 6.13 0.00 0.00 3.06
4152 4837 1.982073 CTTTGATTCACTCGCGGCCC 61.982 60.000 6.13 0.00 0.00 5.80
4155 4840 2.969443 AAACTTTGATTCACTCGCGG 57.031 45.000 6.13 0.00 0.00 6.46
4156 4841 5.336990 CAGTAAAAACTTTGATTCACTCGCG 59.663 40.000 0.00 0.00 0.00 5.87
4160 4845 7.639113 TGACCAGTAAAAACTTTGATTCACT 57.361 32.000 0.00 0.00 0.00 3.41
4165 4850 7.120579 TCGCATATGACCAGTAAAAACTTTGAT 59.879 33.333 6.97 0.00 0.00 2.57
4166 4851 6.428465 TCGCATATGACCAGTAAAAACTTTGA 59.572 34.615 6.97 0.00 0.00 2.69
4167 4852 6.607689 TCGCATATGACCAGTAAAAACTTTG 58.392 36.000 6.97 0.00 0.00 2.77
4170 4855 6.112734 TGATCGCATATGACCAGTAAAAACT 58.887 36.000 6.97 0.00 0.00 2.66
4171 4856 6.358118 TGATCGCATATGACCAGTAAAAAC 57.642 37.500 6.97 0.00 0.00 2.43
4175 4860 3.996363 GCATGATCGCATATGACCAGTAA 59.004 43.478 6.97 0.00 32.27 2.24
4176 4861 3.588955 GCATGATCGCATATGACCAGTA 58.411 45.455 6.97 0.00 32.27 2.74
4177 4862 2.420642 GCATGATCGCATATGACCAGT 58.579 47.619 6.97 0.00 32.27 4.00
4178 4863 1.736126 GGCATGATCGCATATGACCAG 59.264 52.381 6.97 0.00 32.27 4.00
4179 4864 1.348696 AGGCATGATCGCATATGACCA 59.651 47.619 6.97 0.00 32.62 4.02
4180 4865 2.105006 AGGCATGATCGCATATGACC 57.895 50.000 6.97 0.00 32.62 4.02
4181 4866 4.633126 ACATAAGGCATGATCGCATATGAC 59.367 41.667 6.97 6.58 37.01 3.06
4182 4867 4.835678 ACATAAGGCATGATCGCATATGA 58.164 39.130 6.97 0.00 37.01 2.15
4183 4868 6.667007 TTACATAAGGCATGATCGCATATG 57.333 37.500 0.00 0.00 38.33 1.78
4184 4869 7.607607 TCTTTTACATAAGGCATGATCGCATAT 59.392 33.333 0.00 0.00 38.10 1.78
4185 4870 6.934083 TCTTTTACATAAGGCATGATCGCATA 59.066 34.615 0.00 0.00 38.10 3.14
4186 4871 5.764686 TCTTTTACATAAGGCATGATCGCAT 59.235 36.000 0.00 0.00 38.10 4.73
4187 4872 5.122519 TCTTTTACATAAGGCATGATCGCA 58.877 37.500 0.00 0.00 38.10 5.10
4188 4873 5.673337 TCTTTTACATAAGGCATGATCGC 57.327 39.130 0.00 0.00 38.10 4.58
4190 4875 6.973843 TGCATCTTTTACATAAGGCATGATC 58.026 36.000 0.00 0.00 38.10 2.92
4191 4876 6.964807 TGCATCTTTTACATAAGGCATGAT 57.035 33.333 0.00 0.00 38.10 2.45
4192 4877 6.964807 ATGCATCTTTTACATAAGGCATGA 57.035 33.333 0.00 0.00 38.10 3.07
4193 4878 9.531942 TTTAATGCATCTTTTACATAAGGCATG 57.468 29.630 0.00 0.00 35.00 4.06
4194 4879 9.533253 GTTTAATGCATCTTTTACATAAGGCAT 57.467 29.630 0.00 0.00 35.75 4.40
4241 4926 7.544217 ACAAAAGAAGCACGAATTAACTGTTTT 59.456 29.630 0.00 0.00 0.00 2.43
4242 4927 7.033185 ACAAAAGAAGCACGAATTAACTGTTT 58.967 30.769 0.00 0.00 0.00 2.83
4244 4929 6.131544 ACAAAAGAAGCACGAATTAACTGT 57.868 33.333 0.00 0.00 0.00 3.55
4245 4930 7.352739 AGTACAAAAGAAGCACGAATTAACTG 58.647 34.615 0.00 0.00 0.00 3.16
4254 4939 2.096909 CCGTGAGTACAAAAGAAGCACG 60.097 50.000 0.00 0.00 44.86 5.34
4255 4940 3.128349 TCCGTGAGTACAAAAGAAGCAC 58.872 45.455 0.00 0.00 0.00 4.40
4314 5000 2.570415 TATGACTCACCCCGCAAAAA 57.430 45.000 0.00 0.00 0.00 1.94
4315 5001 2.799126 ATATGACTCACCCCGCAAAA 57.201 45.000 0.00 0.00 0.00 2.44
4316 5002 5.012664 ACATATATATGACTCACCCCGCAAA 59.987 40.000 26.05 0.00 37.15 3.68
4317 5003 4.530553 ACATATATATGACTCACCCCGCAA 59.469 41.667 26.05 0.00 37.15 4.85
4318 5004 4.093743 ACATATATATGACTCACCCCGCA 58.906 43.478 26.05 0.00 37.15 5.69
4319 5005 4.737855 ACATATATATGACTCACCCCGC 57.262 45.455 26.05 0.00 37.15 6.13
4320 5006 5.419542 CCAACATATATATGACTCACCCCG 58.580 45.833 26.05 0.00 37.15 5.73
4321 5007 5.186198 GCCAACATATATATGACTCACCCC 58.814 45.833 26.05 5.38 37.15 4.95
4322 5008 5.186198 GGCCAACATATATATGACTCACCC 58.814 45.833 26.05 14.67 37.15 4.61
4323 5009 4.870426 CGGCCAACATATATATGACTCACC 59.130 45.833 26.05 18.09 37.15 4.02
4324 5010 5.479306 ACGGCCAACATATATATGACTCAC 58.521 41.667 26.05 13.18 37.15 3.51
4325 5011 5.738619 ACGGCCAACATATATATGACTCA 57.261 39.130 26.05 0.00 37.15 3.41
4326 5012 6.627243 TGTACGGCCAACATATATATGACTC 58.373 40.000 26.05 12.82 37.15 3.36
4327 5013 6.599356 TGTACGGCCAACATATATATGACT 57.401 37.500 26.05 11.78 37.15 3.41
4328 5014 7.843490 AATGTACGGCCAACATATATATGAC 57.157 36.000 26.05 13.03 36.56 3.06
4329 5015 7.880713 ACAAATGTACGGCCAACATATATATGA 59.119 33.333 26.05 3.26 36.56 2.15
4330 5016 7.962373 CACAAATGTACGGCCAACATATATATG 59.038 37.037 19.21 19.21 36.56 1.78
4331 5017 7.120579 CCACAAATGTACGGCCAACATATATAT 59.879 37.037 18.43 3.02 36.56 0.86
4332 5018 6.428465 CCACAAATGTACGGCCAACATATATA 59.572 38.462 18.43 0.00 36.56 0.86
4333 5019 5.240623 CCACAAATGTACGGCCAACATATAT 59.759 40.000 18.43 7.81 36.56 0.86
4334 5020 4.576873 CCACAAATGTACGGCCAACATATA 59.423 41.667 18.43 0.00 36.56 0.86
4335 5021 3.380004 CCACAAATGTACGGCCAACATAT 59.620 43.478 18.43 8.46 36.56 1.78
4336 5022 2.750166 CCACAAATGTACGGCCAACATA 59.250 45.455 18.43 0.00 36.56 2.29
4337 5023 1.543802 CCACAAATGTACGGCCAACAT 59.456 47.619 13.66 13.66 39.22 2.71
4347 5033 7.589958 ATTTTGTTGACTACCCACAAATGTA 57.410 32.000 0.00 0.00 31.58 2.29
4350 5036 6.266558 TGCTATTTTGTTGACTACCCACAAAT 59.733 34.615 0.00 0.00 31.58 2.32
4358 5044 8.795786 TGATTTGTTGCTATTTTGTTGACTAC 57.204 30.769 0.00 0.00 0.00 2.73
4359 8047 9.243637 GTTGATTTGTTGCTATTTTGTTGACTA 57.756 29.630 0.00 0.00 0.00 2.59
4363 8051 7.224362 TGGAGTTGATTTGTTGCTATTTTGTTG 59.776 33.333 0.00 0.00 0.00 3.33
4364 8052 7.271511 TGGAGTTGATTTGTTGCTATTTTGTT 58.728 30.769 0.00 0.00 0.00 2.83
4398 8086 9.515226 ACTTATAATGTTCTTTTTGCTAGTGGA 57.485 29.630 0.00 0.00 0.00 4.02
4405 8108 7.968405 ACCGATCACTTATAATGTTCTTTTTGC 59.032 33.333 0.00 0.00 0.00 3.68
4415 8118 7.780008 TTGTGGTAACCGATCACTTATAATG 57.220 36.000 0.00 0.00 33.04 1.90
4416 8119 8.044908 AGTTTGTGGTAACCGATCACTTATAAT 58.955 33.333 0.00 0.00 33.04 1.28
4435 8138 0.039618 ATGCCCACCCCTAGTTTGTG 59.960 55.000 0.00 0.00 0.00 3.33
4438 8141 3.835978 GTTTTTATGCCCACCCCTAGTTT 59.164 43.478 0.00 0.00 0.00 2.66
4439 8142 3.437213 GTTTTTATGCCCACCCCTAGTT 58.563 45.455 0.00 0.00 0.00 2.24
4440 8143 2.291996 GGTTTTTATGCCCACCCCTAGT 60.292 50.000 0.00 0.00 0.00 2.57
4441 8144 2.384828 GGTTTTTATGCCCACCCCTAG 58.615 52.381 0.00 0.00 0.00 3.02
4442 8145 1.341187 CGGTTTTTATGCCCACCCCTA 60.341 52.381 0.00 0.00 0.00 3.53
4443 8146 0.613572 CGGTTTTTATGCCCACCCCT 60.614 55.000 0.00 0.00 0.00 4.79
4444 8147 0.612453 TCGGTTTTTATGCCCACCCC 60.612 55.000 0.00 0.00 0.00 4.95
4445 8148 0.528924 GTCGGTTTTTATGCCCACCC 59.471 55.000 0.00 0.00 0.00 4.61
4446 8149 1.249407 TGTCGGTTTTTATGCCCACC 58.751 50.000 0.00 0.00 0.00 4.61
4447 8150 3.054166 GTTTGTCGGTTTTTATGCCCAC 58.946 45.455 0.00 0.00 0.00 4.61
4448 8151 2.036089 GGTTTGTCGGTTTTTATGCCCA 59.964 45.455 0.00 0.00 0.00 5.36
4449 8152 2.679450 GGTTTGTCGGTTTTTATGCCC 58.321 47.619 0.00 0.00 0.00 5.36
4450 8153 2.030981 TCGGTTTGTCGGTTTTTATGCC 60.031 45.455 0.00 0.00 0.00 4.40
4451 8154 3.270962 TCGGTTTGTCGGTTTTTATGC 57.729 42.857 0.00 0.00 0.00 3.14
4452 8155 4.438471 GTGTTCGGTTTGTCGGTTTTTATG 59.562 41.667 0.00 0.00 0.00 1.90
4453 8156 4.497842 GGTGTTCGGTTTGTCGGTTTTTAT 60.498 41.667 0.00 0.00 0.00 1.40
4454 8157 3.181502 GGTGTTCGGTTTGTCGGTTTTTA 60.182 43.478 0.00 0.00 0.00 1.52
4455 8158 2.415759 GGTGTTCGGTTTGTCGGTTTTT 60.416 45.455 0.00 0.00 0.00 1.94
4456 8159 1.132834 GGTGTTCGGTTTGTCGGTTTT 59.867 47.619 0.00 0.00 0.00 2.43
4457 8160 0.734309 GGTGTTCGGTTTGTCGGTTT 59.266 50.000 0.00 0.00 0.00 3.27
4458 8161 1.430707 CGGTGTTCGGTTTGTCGGTT 61.431 55.000 0.00 0.00 34.75 4.44
4459 8162 1.884004 CGGTGTTCGGTTTGTCGGT 60.884 57.895 0.00 0.00 34.75 4.69
4460 8163 2.932905 CGGTGTTCGGTTTGTCGG 59.067 61.111 0.00 0.00 34.75 4.79
4479 8182 2.120355 TTTTCGGTTTCGGCTTCGGC 62.120 55.000 0.00 0.00 40.88 5.54
4480 8183 0.308376 TTTTTCGGTTTCGGCTTCGG 59.692 50.000 0.00 0.00 36.95 4.30
4481 8184 3.829754 TTTTTCGGTTTCGGCTTCG 57.170 47.368 0.00 0.00 36.95 3.79
4500 8203 6.993786 ATTGACAAAAACCAAAAATTCGGT 57.006 29.167 0.00 0.00 36.98 4.69
4501 8204 7.848539 GTGTATTGACAAAAACCAAAAATTCGG 59.151 33.333 0.00 0.00 37.31 4.30
4502 8205 8.383619 TGTGTATTGACAAAAACCAAAAATTCG 58.616 29.630 0.00 0.00 37.31 3.34
4519 8222 9.226606 CCCTAATTAAGTCAGTTTGTGTATTGA 57.773 33.333 0.00 0.00 0.00 2.57
4520 8223 7.968405 GCCCTAATTAAGTCAGTTTGTGTATTG 59.032 37.037 0.00 0.00 0.00 1.90
4521 8224 7.668052 TGCCCTAATTAAGTCAGTTTGTGTATT 59.332 33.333 0.00 0.00 0.00 1.89
4522 8225 7.172342 TGCCCTAATTAAGTCAGTTTGTGTAT 58.828 34.615 0.00 0.00 0.00 2.29
4523 8226 6.535540 TGCCCTAATTAAGTCAGTTTGTGTA 58.464 36.000 0.00 0.00 0.00 2.90
4524 8227 5.381757 TGCCCTAATTAAGTCAGTTTGTGT 58.618 37.500 0.00 0.00 0.00 3.72
4525 8228 5.957842 TGCCCTAATTAAGTCAGTTTGTG 57.042 39.130 0.00 0.00 0.00 3.33
4532 8235 3.287222 GTGCCATGCCCTAATTAAGTCA 58.713 45.455 0.00 0.00 0.00 3.41
4533 8236 2.290641 CGTGCCATGCCCTAATTAAGTC 59.709 50.000 0.00 0.00 0.00 3.01
4537 8240 0.182537 AGCGTGCCATGCCCTAATTA 59.817 50.000 5.02 0.00 0.00 1.40
4539 8242 1.825191 CAGCGTGCCATGCCCTAAT 60.825 57.895 5.02 0.00 0.00 1.73
4543 8246 2.749839 TAACAGCGTGCCATGCCC 60.750 61.111 5.02 0.00 0.00 5.36
4548 8251 0.034198 TTGCTACTAACAGCGTGCCA 59.966 50.000 0.00 0.00 44.88 4.92
4602 8305 6.270815 TCTAATTTGAGACTCGAAATACCGG 58.729 40.000 9.23 0.00 0.00 5.28
4604 8307 8.873215 TGATCTAATTTGAGACTCGAAATACC 57.127 34.615 9.23 0.00 0.00 2.73
4607 8310 9.039870 GTGATGATCTAATTTGAGACTCGAAAT 57.960 33.333 9.23 3.83 0.00 2.17
4608 8311 8.034804 TGTGATGATCTAATTTGAGACTCGAAA 58.965 33.333 9.23 5.99 0.00 3.46
4611 8314 7.704047 TCTTGTGATGATCTAATTTGAGACTCG 59.296 37.037 0.00 0.00 0.00 4.18
4612 8315 8.816144 GTCTTGTGATGATCTAATTTGAGACTC 58.184 37.037 0.00 0.00 0.00 3.36
4613 8316 8.316946 TGTCTTGTGATGATCTAATTTGAGACT 58.683 33.333 0.00 0.00 32.19 3.24
4614 8317 8.484641 TGTCTTGTGATGATCTAATTTGAGAC 57.515 34.615 0.00 0.00 0.00 3.36
4615 8318 8.939929 GTTGTCTTGTGATGATCTAATTTGAGA 58.060 33.333 0.00 0.00 0.00 3.27
4621 13306 4.268644 CGCGTTGTCTTGTGATGATCTAAT 59.731 41.667 0.00 0.00 0.00 1.73
4631 13316 1.010125 CAACCCGCGTTGTCTTGTG 60.010 57.895 4.92 0.00 43.73 3.33
4639 13324 3.757493 TGTAATTTATTCCAACCCGCGTT 59.243 39.130 4.92 0.00 0.00 4.84
4641 13326 4.358494 TTGTAATTTATTCCAACCCGCG 57.642 40.909 0.00 0.00 0.00 6.46
4663 13348 8.827177 ACAGTGTTCGTCTAATTTAATCTCAA 57.173 30.769 0.00 0.00 0.00 3.02
4664 13349 8.085909 TGACAGTGTTCGTCTAATTTAATCTCA 58.914 33.333 0.00 0.00 34.37 3.27
4665 13350 8.462143 TGACAGTGTTCGTCTAATTTAATCTC 57.538 34.615 0.00 0.00 34.37 2.75
4667 15275 7.544566 TCCTGACAGTGTTCGTCTAATTTAATC 59.455 37.037 0.00 0.00 34.37 1.75
4674 15282 4.340097 TCTTTCCTGACAGTGTTCGTCTAA 59.660 41.667 0.00 0.00 34.37 2.10
4678 15286 2.693591 TCTCTTTCCTGACAGTGTTCGT 59.306 45.455 0.00 0.00 0.00 3.85
4679 15287 3.004839 TCTCTCTTTCCTGACAGTGTTCG 59.995 47.826 0.00 0.00 0.00 3.95
4680 15288 4.592485 TCTCTCTTTCCTGACAGTGTTC 57.408 45.455 0.00 0.00 0.00 3.18
4683 15291 4.509600 GTGTTTCTCTCTTTCCTGACAGTG 59.490 45.833 0.93 0.00 0.00 3.66
4685 15293 4.697514 TGTGTTTCTCTCTTTCCTGACAG 58.302 43.478 0.00 0.00 0.00 3.51
4686 15294 4.753516 TGTGTTTCTCTCTTTCCTGACA 57.246 40.909 0.00 0.00 0.00 3.58
4687 15295 5.760253 TGAATGTGTTTCTCTCTTTCCTGAC 59.240 40.000 0.00 0.00 35.23 3.51
4689 15297 6.624352 TTGAATGTGTTTCTCTCTTTCCTG 57.376 37.500 0.00 0.00 35.23 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.