Multiple sequence alignment - TraesCS3B01G487400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G487400 chr3B 100.000 2892 0 0 1 2892 733573035 733575926 0.000000e+00 5341.0
1 TraesCS3B01G487400 chr3B 81.170 940 107 32 997 1898 733628624 733629531 0.000000e+00 691.0
2 TraesCS3B01G487400 chr2D 80.758 1398 124 54 514 1797 488871591 488872957 0.000000e+00 957.0
3 TraesCS3B01G487400 chr2D 82.553 470 73 4 2428 2890 121732084 121732551 3.470000e-109 405.0
4 TraesCS3B01G487400 chr2D 77.793 707 114 29 1049 1726 489009828 489009136 2.090000e-106 396.0
5 TraesCS3B01G487400 chr2D 83.010 412 53 9 2498 2892 650689431 650689842 9.850000e-95 357.0
6 TraesCS3B01G487400 chr2D 91.837 98 8 0 1 98 488871496 488871593 1.400000e-28 137.0
7 TraesCS3B01G487400 chr2D 85.567 97 13 1 2515 2610 48131928 48131832 1.830000e-17 100.0
8 TraesCS3B01G487400 chr2D 89.474 57 2 2 1996 2048 488994434 488994378 5.170000e-08 69.4
9 TraesCS3B01G487400 chr1B 85.435 817 81 20 966 1767 526348926 526348133 0.000000e+00 815.0
10 TraesCS3B01G487400 chr1B 82.075 424 57 12 96 515 634112739 634113147 7.670000e-91 344.0
11 TraesCS3B01G487400 chr1B 96.000 50 2 0 1836 1885 526348053 526348004 6.640000e-12 82.4
12 TraesCS3B01G487400 chr1B 87.931 58 5 2 1995 2051 526347904 526347848 1.860000e-07 67.6
13 TraesCS3B01G487400 chr1A 83.280 933 102 30 973 1885 489601219 489600321 0.000000e+00 809.0
14 TraesCS3B01G487400 chr1A 81.405 484 70 9 2424 2888 589861916 589862398 7.560000e-101 377.0
15 TraesCS3B01G487400 chr1A 91.903 247 20 0 99 345 386478352 386478106 2.130000e-91 346.0
16 TraesCS3B01G487400 chr1A 87.302 63 6 2 1990 2051 489600259 489600198 1.440000e-08 71.3
17 TraesCS3B01G487400 chr1D 83.369 926 98 32 975 1879 395559611 395558721 0.000000e+00 806.0
18 TraesCS3B01G487400 chr1D 77.858 831 109 40 968 1732 460187684 460186863 2.040000e-121 446.0
19 TraesCS3B01G487400 chr1D 84.507 71 9 2 1995 2064 395558615 395558546 5.170000e-08 69.4
20 TraesCS3B01G487400 chr7B 84.915 822 63 28 966 1767 632684637 632685417 0.000000e+00 774.0
21 TraesCS3B01G487400 chr7B 80.534 637 80 15 1055 1647 20016858 20016222 1.580000e-122 449.0
22 TraesCS3B01G487400 chr7B 84.235 425 60 7 97 519 7035935 7036354 9.650000e-110 407.0
23 TraesCS3B01G487400 chr7B 81.162 499 78 12 971 1457 20035509 20035015 1.260000e-103 387.0
24 TraesCS3B01G487400 chr7B 84.069 408 49 8 2498 2892 144283027 144283431 2.100000e-101 379.0
25 TraesCS3B01G487400 chr7B 82.816 419 63 7 99 514 268452671 268453083 1.640000e-97 366.0
26 TraesCS3B01G487400 chr7B 93.004 243 16 1 96 337 40090808 40091050 1.270000e-93 353.0
27 TraesCS3B01G487400 chr7B 81.440 361 33 13 650 983 20026883 20026530 6.140000e-67 265.0
28 TraesCS3B01G487400 chr7B 85.075 134 11 6 1744 1869 632688439 632688571 8.410000e-26 128.0
29 TraesCS3B01G487400 chr7B 94.595 74 4 0 24 97 20033224 20033151 6.550000e-22 115.0
30 TraesCS3B01G487400 chr7B 86.747 83 10 1 2522 2603 451948853 451948771 1.100000e-14 91.6
31 TraesCS3B01G487400 chr7B 82.474 97 16 1 2515 2610 646257693 646257789 1.850000e-12 84.2
32 TraesCS3B01G487400 chr7B 92.593 54 3 1 1989 2042 632685623 632685675 3.090000e-10 76.8
33 TraesCS3B01G487400 chr7B 100.000 30 0 0 1836 1865 632685499 632685528 4.030000e-04 56.5
34 TraesCS3B01G487400 chr7D 83.942 822 69 26 968 1767 573898028 573898808 0.000000e+00 728.0
35 TraesCS3B01G487400 chr7D 84.127 378 52 5 2523 2892 178144592 178144969 2.740000e-95 359.0
36 TraesCS3B01G487400 chr7D 85.075 134 11 6 1744 1869 573905458 573905590 8.410000e-26 128.0
37 TraesCS3B01G487400 chr7D 92.593 54 3 1 1989 2042 573899014 573899066 3.090000e-10 76.8
38 TraesCS3B01G487400 chr7D 100.000 30 0 0 1836 1865 573898890 573898919 4.030000e-04 56.5
39 TraesCS3B01G487400 chr3D 80.806 943 110 38 997 1898 552782381 552783293 0.000000e+00 673.0
40 TraesCS3B01G487400 chr3D 76.596 940 138 46 869 1732 552769861 552770794 2.640000e-120 442.0
41 TraesCS3B01G487400 chr3D 82.906 468 70 5 2420 2879 108420334 108420799 2.070000e-111 412.0
42 TraesCS3B01G487400 chr3D 93.182 88 6 0 514 601 552759577 552759664 2.340000e-26 130.0
43 TraesCS3B01G487400 chr3D 100.000 51 0 0 641 691 552759681 552759731 8.530000e-16 95.3
44 TraesCS3B01G487400 chr3D 98.148 54 1 0 807 860 552759938 552759885 8.530000e-16 95.3
45 TraesCS3B01G487400 chr3D 97.059 34 1 0 746 779 552782148 552782181 1.120000e-04 58.4
46 TraesCS3B01G487400 chr4B 91.569 427 31 4 99 522 99751966 99751542 4.150000e-163 584.0
47 TraesCS3B01G487400 chr3A 85.859 495 52 2 996 1472 689111918 689112412 7.150000e-141 510.0
48 TraesCS3B01G487400 chr3A 75.976 820 101 47 990 1732 689073146 689073946 4.620000e-88 335.0
49 TraesCS3B01G487400 chr3A 91.542 201 12 3 2205 2404 689068830 689069026 3.670000e-69 272.0
50 TraesCS3B01G487400 chr3A 97.059 34 1 0 746 779 689111689 689111722 1.120000e-04 58.4
51 TraesCS3B01G487400 chr2B 85.082 429 54 8 97 522 31715769 31716190 2.060000e-116 429.0
52 TraesCS3B01G487400 chr2B 77.448 776 129 30 990 1732 759274385 759273623 3.450000e-114 422.0
53 TraesCS3B01G487400 chr2B 81.930 487 66 9 2424 2892 775111978 775111496 2.700000e-105 392.0
54 TraesCS3B01G487400 chr2B 92.720 261 17 2 93 352 90403642 90403383 2.720000e-100 375.0
55 TraesCS3B01G487400 chr2B 79.840 501 84 11 971 1457 759301974 759301477 1.650000e-92 350.0
56 TraesCS3B01G487400 chr2B 94.000 150 7 2 373 520 90403076 90402927 2.900000e-55 226.0
57 TraesCS3B01G487400 chr2B 81.333 150 24 3 1609 1756 759301405 759301258 5.060000e-23 119.0
58 TraesCS3B01G487400 chr2B 81.250 112 18 3 2498 2608 662344225 662344116 1.430000e-13 87.9
59 TraesCS3B01G487400 chr2B 100.000 29 0 0 830 858 759274526 759274498 1.000000e-03 54.7
60 TraesCS3B01G487400 chr2B 100.000 28 0 0 1996 2023 759273348 759273321 5.000000e-03 52.8
61 TraesCS3B01G487400 chr5A 84.977 426 57 6 97 521 657270266 657269847 2.660000e-115 425.0
62 TraesCS3B01G487400 chr5A 92.398 171 12 1 352 521 575606551 575606381 2.880000e-60 243.0
63 TraesCS3B01G487400 chr2A 81.978 455 77 5 991 1444 751197879 751197429 5.850000e-102 381.0
64 TraesCS3B01G487400 chr2A 78.974 195 31 8 1566 1756 751197386 751197198 1.090000e-24 124.0
65 TraesCS3B01G487400 chr2A 82.203 118 13 7 2519 2632 673191729 673191842 8.530000e-16 95.3
66 TraesCS3B01G487400 chr4D 80.785 484 73 15 2420 2892 215437142 215437616 7.620000e-96 361.0
67 TraesCS3B01G487400 chr4D 88.571 280 31 1 2614 2892 496056061 496056340 3.570000e-89 339.0
68 TraesCS3B01G487400 chr5D 90.643 171 15 1 352 521 457674506 457674336 2.900000e-55 226.0
69 TraesCS3B01G487400 chr5D 78.010 191 28 12 2424 2610 383742626 383742446 1.100000e-19 108.0
70 TraesCS3B01G487400 chr5D 86.047 86 10 2 2515 2599 472430972 472431056 1.100000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G487400 chr3B 733573035 733575926 2891 False 5341.000000 5341 100.000000 1 2892 1 chr3B.!!$F1 2891
1 TraesCS3B01G487400 chr3B 733628624 733629531 907 False 691.000000 691 81.170000 997 1898 1 chr3B.!!$F2 901
2 TraesCS3B01G487400 chr2D 488871496 488872957 1461 False 547.000000 957 86.297500 1 1797 2 chr2D.!!$F3 1796
3 TraesCS3B01G487400 chr2D 489009136 489009828 692 True 396.000000 396 77.793000 1049 1726 1 chr2D.!!$R3 677
4 TraesCS3B01G487400 chr1B 526347848 526348926 1078 True 321.666667 815 89.788667 966 2051 3 chr1B.!!$R1 1085
5 TraesCS3B01G487400 chr1A 489600198 489601219 1021 True 440.150000 809 85.291000 973 2051 2 chr1A.!!$R2 1078
6 TraesCS3B01G487400 chr1D 460186863 460187684 821 True 446.000000 446 77.858000 968 1732 1 chr1D.!!$R1 764
7 TraesCS3B01G487400 chr1D 395558546 395559611 1065 True 437.700000 806 83.938000 975 2064 2 chr1D.!!$R2 1089
8 TraesCS3B01G487400 chr7B 20016222 20016858 636 True 449.000000 449 80.534000 1055 1647 1 chr7B.!!$R1 592
9 TraesCS3B01G487400 chr7B 632684637 632688571 3934 False 258.825000 774 90.645750 966 2042 4 chr7B.!!$F6 1076
10 TraesCS3B01G487400 chr7B 20033151 20035509 2358 True 251.000000 387 87.878500 24 1457 2 chr7B.!!$R4 1433
11 TraesCS3B01G487400 chr7D 573898028 573899066 1038 False 287.100000 728 92.178333 968 2042 3 chr7D.!!$F3 1074
12 TraesCS3B01G487400 chr3D 552769861 552770794 933 False 442.000000 442 76.596000 869 1732 1 chr3D.!!$F2 863
13 TraesCS3B01G487400 chr3D 552782148 552783293 1145 False 365.700000 673 88.932500 746 1898 2 chr3D.!!$F4 1152
14 TraesCS3B01G487400 chr3A 689073146 689073946 800 False 335.000000 335 75.976000 990 1732 1 chr3A.!!$F2 742
15 TraesCS3B01G487400 chr3A 689111689 689112412 723 False 284.200000 510 91.459000 746 1472 2 chr3A.!!$F3 726
16 TraesCS3B01G487400 chr2B 90402927 90403642 715 True 300.500000 375 93.360000 93 520 2 chr2B.!!$R3 427
17 TraesCS3B01G487400 chr2B 759301258 759301974 716 True 234.500000 350 80.586500 971 1756 2 chr2B.!!$R5 785
18 TraesCS3B01G487400 chr2A 751197198 751197879 681 True 252.500000 381 80.476000 991 1756 2 chr2A.!!$R1 765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
744 1045 0.03601 CCTCAGGAGTGACGGCAATT 60.036 55.0 0.0 0.0 0.0 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2502 5690 0.171007 CTGTTTAATGCACCCGCCTG 59.829 55.0 0.0 0.0 37.32 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.825593 ATATCGGATAACTGAACCACCAT 57.174 39.130 1.16 0.00 34.89 3.55
28 29 4.192317 GGATAACTGAACCACCATCACTC 58.808 47.826 0.00 0.00 0.00 3.51
80 81 2.521126 TGAACTACCACCACTCGATGA 58.479 47.619 0.00 0.00 0.00 2.92
129 130 2.439507 TGACATAGAGGGATTTCCAGCC 59.560 50.000 0.00 0.00 38.24 4.85
131 132 1.074566 CATAGAGGGATTTCCAGCCCC 59.925 57.143 0.00 0.00 45.89 5.80
133 134 0.628668 AGAGGGATTTCCAGCCCCAT 60.629 55.000 0.00 0.00 45.89 4.00
135 136 1.074566 GAGGGATTTCCAGCCCCATAG 59.925 57.143 0.00 0.00 45.89 2.23
190 191 0.919289 TCTTCCACCCAATCCCCTCC 60.919 60.000 0.00 0.00 0.00 4.30
194 195 0.106015 CCACCCAATCCCCTCCAATC 60.106 60.000 0.00 0.00 0.00 2.67
217 218 4.292643 CCTTTGAATCATCAATCCCCCTT 58.707 43.478 0.00 0.00 44.70 3.95
220 221 4.819702 TGAATCATCAATCCCCCTTCAT 57.180 40.909 0.00 0.00 30.99 2.57
231 232 6.902416 TCAATCCCCCTTCATTCAACATATTT 59.098 34.615 0.00 0.00 0.00 1.40
272 273 1.602771 CCTTTTCCTCCCGTCTCCC 59.397 63.158 0.00 0.00 0.00 4.30
289 290 2.328099 CCGTTGGAGGAGTTGCTGC 61.328 63.158 0.00 0.00 0.00 5.25
290 291 1.302033 CGTTGGAGGAGTTGCTGCT 60.302 57.895 0.00 0.00 34.11 4.24
311 312 2.355193 GGGCAGAGACGAAGGAGCT 61.355 63.158 0.00 0.00 0.00 4.09
352 353 3.597728 GCGAGGGGCTACGAGAGG 61.598 72.222 0.00 0.00 39.11 3.69
353 354 2.124236 CGAGGGGCTACGAGAGGT 60.124 66.667 0.00 0.00 0.00 3.85
354 355 1.753463 CGAGGGGCTACGAGAGGTT 60.753 63.158 0.00 0.00 0.00 3.50
355 356 1.817209 GAGGGGCTACGAGAGGTTG 59.183 63.158 0.00 0.00 0.00 3.77
356 357 2.187163 GGGGCTACGAGAGGTTGC 59.813 66.667 0.00 0.00 45.08 4.17
357 358 2.359967 GGGGCTACGAGAGGTTGCT 61.360 63.158 0.00 0.00 45.14 3.91
358 359 1.153549 GGGCTACGAGAGGTTGCTG 60.154 63.158 0.00 0.00 45.14 4.41
359 360 1.605058 GGGCTACGAGAGGTTGCTGA 61.605 60.000 0.00 0.00 45.14 4.26
360 361 0.179124 GGCTACGAGAGGTTGCTGAG 60.179 60.000 0.00 0.00 45.14 3.35
361 362 0.804156 GCTACGAGAGGTTGCTGAGC 60.804 60.000 0.00 0.00 42.94 4.26
362 363 0.179124 CTACGAGAGGTTGCTGAGCC 60.179 60.000 0.23 0.00 0.00 4.70
363 364 1.934220 TACGAGAGGTTGCTGAGCCG 61.934 60.000 0.23 0.00 0.00 5.52
364 365 2.817396 GAGAGGTTGCTGAGCCGC 60.817 66.667 0.23 0.00 0.00 6.53
365 366 3.596066 GAGAGGTTGCTGAGCCGCA 62.596 63.158 0.23 0.00 38.31 5.69
366 367 2.437359 GAGGTTGCTGAGCCGCAT 60.437 61.111 0.23 0.00 40.04 4.73
367 368 2.749044 AGGTTGCTGAGCCGCATG 60.749 61.111 0.23 0.00 40.04 4.06
368 369 3.818787 GGTTGCTGAGCCGCATGG 61.819 66.667 0.23 0.00 40.04 3.66
369 370 3.818787 GTTGCTGAGCCGCATGGG 61.819 66.667 0.23 2.06 40.04 4.00
418 706 2.310538 GTTTGGCCCATCTAATCCCTG 58.689 52.381 0.00 0.00 0.00 4.45
456 745 1.852633 GGGTTTTCTGGGGATTCTGG 58.147 55.000 0.00 0.00 0.00 3.86
461 750 2.697644 CTGGGGATTCTGGGCCCT 60.698 66.667 25.70 0.66 44.10 5.19
462 751 3.023116 TGGGGATTCTGGGCCCTG 61.023 66.667 25.70 23.93 44.10 4.45
476 765 2.282462 CCTGCGGGCATATTCCCC 60.282 66.667 4.69 1.53 43.56 4.81
517 806 3.008594 TCTTCCATCAAACGAGGCCTTAA 59.991 43.478 6.77 0.00 0.00 1.85
520 809 2.358898 CCATCAAACGAGGCCTTAATGG 59.641 50.000 6.77 10.34 39.35 3.16
521 810 3.278574 CATCAAACGAGGCCTTAATGGA 58.721 45.455 6.77 2.92 38.35 3.41
524 813 3.945285 TCAAACGAGGCCTTAATGGAATC 59.055 43.478 6.77 0.00 38.35 2.52
545 834 7.361286 GGAATCGATCTAGCAAACTGACTTTTT 60.361 37.037 0.00 0.00 0.00 1.94
583 872 2.827921 CAAAAAGGCACTAGAATGGGCT 59.172 45.455 0.00 0.00 38.49 5.19
604 905 2.673775 TTGCCAAGATGGAAACCTCA 57.326 45.000 0.00 0.00 40.96 3.86
621 922 3.650950 AGGAGGTGCGCCATTGGT 61.651 61.111 20.59 0.00 37.19 3.67
639 940 4.839668 TGGTGCACCACAAAACTTATAC 57.160 40.909 34.74 3.62 42.01 1.47
674 975 5.950758 AATCTACATTGCGTGTAACCAAA 57.049 34.783 3.74 0.00 42.50 3.28
684 985 6.255596 TGCGTGTAACCAAATTTTATGCTA 57.744 33.333 0.00 0.00 0.00 3.49
717 1018 9.434420 TTTATCTACCAGCATTTTCAAATTTGG 57.566 29.630 17.90 1.95 36.95 3.28
723 1024 7.650890 ACCAGCATTTTCAAATTTGGAAAATC 58.349 30.769 24.78 18.88 46.52 2.17
730 1031 8.436046 TTTTCAAATTTGGAAAATCACCTCAG 57.564 30.769 20.11 0.00 38.82 3.35
734 1035 4.453480 TTTGGAAAATCACCTCAGGAGT 57.547 40.909 0.00 0.00 0.00 3.85
737 1038 3.244561 TGGAAAATCACCTCAGGAGTGAC 60.245 47.826 0.00 0.00 0.00 3.67
738 1039 2.751166 AAATCACCTCAGGAGTGACG 57.249 50.000 0.00 0.00 0.00 4.35
739 1040 0.898320 AATCACCTCAGGAGTGACGG 59.102 55.000 0.00 0.00 0.00 4.79
740 1041 1.608717 ATCACCTCAGGAGTGACGGC 61.609 60.000 0.00 0.00 0.00 5.68
741 1042 2.203640 ACCTCAGGAGTGACGGCA 60.204 61.111 0.00 0.00 0.00 5.69
742 1043 1.837051 ACCTCAGGAGTGACGGCAA 60.837 57.895 0.00 0.00 0.00 4.52
743 1044 1.194781 ACCTCAGGAGTGACGGCAAT 61.195 55.000 0.00 0.00 0.00 3.56
744 1045 0.036010 CCTCAGGAGTGACGGCAATT 60.036 55.000 0.00 0.00 0.00 2.32
781 1082 3.625099 GGGAGCACGCTACCCTTA 58.375 61.111 9.35 0.00 41.23 2.69
782 1083 1.143401 GGGAGCACGCTACCCTTAC 59.857 63.158 9.35 0.00 41.23 2.34
783 1084 1.143401 GGAGCACGCTACCCTTACC 59.857 63.158 0.00 0.00 0.00 2.85
784 1085 1.143401 GAGCACGCTACCCTTACCC 59.857 63.158 0.00 0.00 0.00 3.69
785 1086 2.188731 GCACGCTACCCTTACCCC 59.811 66.667 0.00 0.00 0.00 4.95
787 1088 1.907222 GCACGCTACCCTTACCCCTT 61.907 60.000 0.00 0.00 0.00 3.95
788 1089 0.616891 CACGCTACCCTTACCCCTTT 59.383 55.000 0.00 0.00 0.00 3.11
789 1090 1.003928 CACGCTACCCTTACCCCTTTT 59.996 52.381 0.00 0.00 0.00 2.27
790 1091 1.706866 ACGCTACCCTTACCCCTTTTT 59.293 47.619 0.00 0.00 0.00 1.94
791 1092 2.089201 CGCTACCCTTACCCCTTTTTG 58.911 52.381 0.00 0.00 0.00 2.44
792 1093 2.453521 GCTACCCTTACCCCTTTTTGG 58.546 52.381 0.00 0.00 0.00 3.28
793 1094 2.225192 GCTACCCTTACCCCTTTTTGGT 60.225 50.000 0.00 0.00 39.97 3.67
794 1095 2.391926 ACCCTTACCCCTTTTTGGTG 57.608 50.000 0.00 0.00 36.57 4.17
795 1096 1.860906 ACCCTTACCCCTTTTTGGTGA 59.139 47.619 0.00 0.00 36.57 4.02
802 1103 1.547372 CCCCTTTTTGGTGAGCATGAG 59.453 52.381 0.00 0.00 0.00 2.90
812 1113 0.671472 TGAGCATGAGCACGGTCAAG 60.671 55.000 2.65 0.00 45.49 3.02
823 1124 2.096218 GCACGGTCAAGATGAGTCAAAC 60.096 50.000 0.00 0.00 0.00 2.93
871 1191 0.455005 GCCAGCAGCAGAATTTCTCC 59.545 55.000 0.00 0.00 42.97 3.71
877 1197 3.695060 AGCAGCAGAATTTCTCCTCAATG 59.305 43.478 0.00 0.00 0.00 2.82
881 1201 3.359033 CAGAATTTCTCCTCAATGGCCA 58.641 45.455 8.56 8.56 35.26 5.36
927 1269 1.125093 TTTTCACCTGCCTCCTCCGA 61.125 55.000 0.00 0.00 0.00 4.55
931 1273 0.955919 CACCTGCCTCCTCCGAAAAC 60.956 60.000 0.00 0.00 0.00 2.43
932 1274 1.128188 ACCTGCCTCCTCCGAAAACT 61.128 55.000 0.00 0.00 0.00 2.66
934 1276 0.737715 CTGCCTCCTCCGAAAACTCG 60.738 60.000 0.00 0.00 0.00 4.18
945 1287 3.174799 CGAAAACTCGGAGCTTTTCTG 57.825 47.619 25.47 19.83 35.21 3.02
946 1288 2.096218 CGAAAACTCGGAGCTTTTCTGG 60.096 50.000 25.47 16.31 35.21 3.86
962 1307 2.171840 TCTGGTCTCTCCTTTCCTTCG 58.828 52.381 0.00 0.00 37.07 3.79
979 1337 1.515952 CGTTGCAGCGAGAGAGAGG 60.516 63.158 18.92 0.00 0.00 3.69
1189 1611 4.009002 GGACGTCTTCAAGGTCTACTACT 58.991 47.826 16.46 0.00 41.51 2.57
1191 1613 5.048154 GGACGTCTTCAAGGTCTACTACTTT 60.048 44.000 16.46 0.00 41.51 2.66
1311 1739 2.278271 GAGCAGCTCTACGACGCC 60.278 66.667 15.78 0.00 0.00 5.68
1549 2063 3.311110 TCGGCCTTTCAGACGCCT 61.311 61.111 0.00 0.00 40.70 5.52
1676 2216 0.109272 ATCAAGCACATCGACGTCGT 60.109 50.000 34.40 20.51 40.80 4.34
1710 2256 4.493747 CGCTTCCTCGACCCCGAC 62.494 72.222 0.00 0.00 40.30 4.79
1774 2331 3.467803 CTCGGAGTTGAGGTTCAAAGTT 58.532 45.455 0.00 0.00 38.22 2.66
1785 2348 4.983671 GGTTCAAAGTTCAAACCTCTGT 57.016 40.909 10.63 0.00 39.48 3.41
1788 2351 5.125578 GGTTCAAAGTTCAAACCTCTGTCTT 59.874 40.000 10.63 0.00 39.48 3.01
1801 2373 1.694150 TCTGTCTTGTGTTCCTCCCTG 59.306 52.381 0.00 0.00 0.00 4.45
1816 2419 1.848388 TCCCTGGCATCAATCTGACAT 59.152 47.619 0.00 0.00 32.56 3.06
1820 2423 3.067742 CCTGGCATCAATCTGACATTTCC 59.932 47.826 0.00 0.00 32.56 3.13
1821 2424 2.684374 TGGCATCAATCTGACATTTCCG 59.316 45.455 0.00 0.00 0.00 4.30
1822 2425 2.945008 GGCATCAATCTGACATTTCCGA 59.055 45.455 0.00 0.00 0.00 4.55
1824 2427 4.037208 GGCATCAATCTGACATTTCCGATT 59.963 41.667 0.00 0.00 36.43 3.34
1827 2430 7.119699 GGCATCAATCTGACATTTCCGATTATA 59.880 37.037 0.00 0.00 34.44 0.98
1828 2431 7.959651 GCATCAATCTGACATTTCCGATTATAC 59.040 37.037 0.00 0.00 34.44 1.47
1829 2432 8.992073 CATCAATCTGACATTTCCGATTATACA 58.008 33.333 0.00 0.00 34.44 2.29
1830 2433 9.730705 ATCAATCTGACATTTCCGATTATACAT 57.269 29.630 0.00 0.00 34.44 2.29
1831 2434 9.208022 TCAATCTGACATTTCCGATTATACATC 57.792 33.333 0.00 0.00 34.44 3.06
1879 2497 1.137086 CCCACTACTTCACCTGATCCG 59.863 57.143 0.00 0.00 0.00 4.18
1898 2516 1.929836 CGTCAACAGATTAGCCAGCTC 59.070 52.381 0.00 0.00 0.00 4.09
1914 2532 1.294780 CTCACTGGACTGGAGCACC 59.705 63.158 0.00 0.00 0.00 5.01
1915 2533 1.152247 TCACTGGACTGGAGCACCT 60.152 57.895 0.71 0.00 37.04 4.00
1916 2534 1.188219 TCACTGGACTGGAGCACCTC 61.188 60.000 0.71 0.00 37.04 3.85
1917 2535 1.152247 ACTGGACTGGAGCACCTCA 60.152 57.895 0.71 0.00 37.04 3.86
1918 2536 1.294780 CTGGACTGGAGCACCTCAC 59.705 63.158 0.71 0.00 37.04 3.51
1919 2537 2.177594 CTGGACTGGAGCACCTCACC 62.178 65.000 0.71 2.75 37.04 4.02
1920 2538 1.915769 GGACTGGAGCACCTCACCT 60.916 63.158 0.71 0.00 37.04 4.00
1921 2539 1.294780 GACTGGAGCACCTCACCTG 59.705 63.158 0.71 0.00 37.04 4.00
1922 2540 1.152247 ACTGGAGCACCTCACCTGA 60.152 57.895 0.71 0.00 37.04 3.86
1923 2541 0.546267 ACTGGAGCACCTCACCTGAT 60.546 55.000 0.71 0.00 37.04 2.90
1924 2542 0.177604 CTGGAGCACCTCACCTGATC 59.822 60.000 0.71 0.00 37.04 2.92
1925 2543 1.142748 GGAGCACCTCACCTGATCG 59.857 63.158 0.00 0.00 31.08 3.69
1926 2544 1.323271 GGAGCACCTCACCTGATCGA 61.323 60.000 0.00 0.00 31.08 3.59
1927 2545 0.749649 GAGCACCTCACCTGATCGAT 59.250 55.000 0.00 0.00 0.00 3.59
1928 2546 1.137872 GAGCACCTCACCTGATCGATT 59.862 52.381 0.00 0.00 0.00 3.34
1929 2547 1.134580 AGCACCTCACCTGATCGATTG 60.135 52.381 0.00 0.00 0.00 2.67
1930 2548 1.134699 GCACCTCACCTGATCGATTGA 60.135 52.381 0.00 0.00 0.00 2.57
1931 2549 2.819115 CACCTCACCTGATCGATTGAG 58.181 52.381 15.09 15.09 36.10 3.02
1932 2550 2.522836 CCTCACCTGATCGATTGAGG 57.477 55.000 23.02 23.02 47.00 3.86
1933 2551 1.539929 CCTCACCTGATCGATTGAGGC 60.540 57.143 24.05 2.91 46.57 4.70
1934 2552 1.411977 CTCACCTGATCGATTGAGGCT 59.588 52.381 19.47 8.29 33.25 4.58
1935 2553 2.625314 CTCACCTGATCGATTGAGGCTA 59.375 50.000 19.47 10.16 33.25 3.93
1936 2554 3.234353 TCACCTGATCGATTGAGGCTAT 58.766 45.455 19.47 3.25 0.00 2.97
1937 2555 3.256879 TCACCTGATCGATTGAGGCTATC 59.743 47.826 19.47 0.00 0.00 2.08
1938 2556 2.230025 ACCTGATCGATTGAGGCTATCG 59.770 50.000 19.47 12.37 44.64 2.92
1939 2557 2.416566 CCTGATCGATTGAGGCTATCGG 60.417 54.545 17.09 7.09 43.73 4.18
1940 2558 2.489722 CTGATCGATTGAGGCTATCGGA 59.510 50.000 17.09 6.94 43.73 4.55
1941 2559 3.092301 TGATCGATTGAGGCTATCGGAT 58.908 45.455 17.09 10.55 43.73 4.18
1942 2560 4.270008 TGATCGATTGAGGCTATCGGATA 58.730 43.478 17.09 0.00 43.73 2.59
1943 2561 4.889995 TGATCGATTGAGGCTATCGGATAT 59.110 41.667 17.09 6.07 43.73 1.63
1944 2562 4.639135 TCGATTGAGGCTATCGGATATG 57.361 45.455 17.09 0.00 43.73 1.78
1947 2565 4.142160 CGATTGAGGCTATCGGATATGGAA 60.142 45.833 11.03 0.00 40.78 3.53
1948 2566 5.452496 CGATTGAGGCTATCGGATATGGAAT 60.452 44.000 11.03 0.00 40.78 3.01
1960 2588 4.142534 CGGATATGGAATTAAGCCATGCTG 60.143 45.833 18.23 12.68 45.39 4.41
1966 2594 3.305199 GGAATTAAGCCATGCTGATGCTC 60.305 47.826 0.00 0.00 39.62 4.26
1967 2595 1.683943 TTAAGCCATGCTGATGCTCC 58.316 50.000 0.00 0.00 39.62 4.70
1968 2596 0.547553 TAAGCCATGCTGATGCTCCA 59.452 50.000 0.00 0.00 39.62 3.86
1969 2597 1.035932 AAGCCATGCTGATGCTCCAC 61.036 55.000 0.00 0.00 39.62 4.02
1972 2600 0.395311 CCATGCTGATGCTCCACCTT 60.395 55.000 0.00 0.00 40.48 3.50
1974 2602 1.404391 CATGCTGATGCTCCACCTTTC 59.596 52.381 0.00 0.00 40.48 2.62
1976 2604 1.093159 GCTGATGCTCCACCTTTCAG 58.907 55.000 0.00 0.00 37.47 3.02
1981 2609 3.327757 TGATGCTCCACCTTTCAGTTACT 59.672 43.478 0.00 0.00 0.00 2.24
1985 2613 4.347000 TGCTCCACCTTTCAGTTACTTAGT 59.653 41.667 0.00 0.00 0.00 2.24
1986 2614 5.163237 TGCTCCACCTTTCAGTTACTTAGTT 60.163 40.000 0.00 0.00 0.00 2.24
1988 2616 6.932960 GCTCCACCTTTCAGTTACTTAGTTTA 59.067 38.462 0.00 0.00 0.00 2.01
1990 2618 9.152595 CTCCACCTTTCAGTTACTTAGTTTATC 57.847 37.037 0.00 0.00 0.00 1.75
1991 2619 8.653191 TCCACCTTTCAGTTACTTAGTTTATCA 58.347 33.333 0.00 0.00 0.00 2.15
2023 2699 5.123979 AGACTTGTGGTTTCAGTTCAGTTTC 59.876 40.000 0.00 0.00 0.00 2.78
2026 2702 3.754323 TGTGGTTTCAGTTCAGTTTCGTT 59.246 39.130 0.00 0.00 0.00 3.85
2038 2714 7.900352 CAGTTCAGTTTCGTTAGATTAATCTGC 59.100 37.037 25.22 16.88 37.76 4.26
2042 2718 5.294552 AGTTTCGTTAGATTAATCTGCTGCC 59.705 40.000 25.22 9.16 37.76 4.85
2051 2727 1.964552 AATCTGCTGCCATGCTACTC 58.035 50.000 0.00 0.00 0.00 2.59
2052 2728 1.129917 ATCTGCTGCCATGCTACTCT 58.870 50.000 0.00 0.00 0.00 3.24
2053 2729 0.463204 TCTGCTGCCATGCTACTCTC 59.537 55.000 0.00 0.00 0.00 3.20
2054 2730 0.464870 CTGCTGCCATGCTACTCTCT 59.535 55.000 0.00 0.00 0.00 3.10
2055 2731 1.685517 CTGCTGCCATGCTACTCTCTA 59.314 52.381 0.00 0.00 0.00 2.43
2056 2732 1.410517 TGCTGCCATGCTACTCTCTAC 59.589 52.381 0.00 0.00 0.00 2.59
2057 2733 1.686052 GCTGCCATGCTACTCTCTACT 59.314 52.381 0.00 0.00 0.00 2.57
2058 2734 2.102252 GCTGCCATGCTACTCTCTACTT 59.898 50.000 0.00 0.00 0.00 2.24
2059 2735 3.431486 GCTGCCATGCTACTCTCTACTTT 60.431 47.826 0.00 0.00 0.00 2.66
2060 2736 4.764172 CTGCCATGCTACTCTCTACTTTT 58.236 43.478 0.00 0.00 0.00 2.27
2061 2737 5.165961 TGCCATGCTACTCTCTACTTTTT 57.834 39.130 0.00 0.00 0.00 1.94
2114 2790 1.622607 ATTCATTCCTGGACGGCCGA 61.623 55.000 35.90 8.90 36.79 5.54
2115 2791 1.622607 TTCATTCCTGGACGGCCGAT 61.623 55.000 35.90 16.95 36.79 4.18
2117 2793 3.106986 ATTCCTGGACGGCCGATGG 62.107 63.158 35.90 25.27 36.79 3.51
2134 2810 2.779429 TGGCAATCCATGGGATGATT 57.221 45.000 13.02 0.69 42.27 2.57
2135 2811 2.321719 TGGCAATCCATGGGATGATTG 58.678 47.619 13.02 14.93 42.27 2.67
2138 2814 1.621814 CAATCCATGGGATGATTGCCC 59.378 52.381 13.02 0.00 42.27 5.36
2143 2819 4.692930 GGGATGATTGCCCAGCTT 57.307 55.556 0.00 0.00 45.31 3.74
2144 2820 3.827505 GGGATGATTGCCCAGCTTA 57.172 52.632 0.00 0.00 45.31 3.09
2145 2821 2.299326 GGGATGATTGCCCAGCTTAT 57.701 50.000 0.00 0.00 45.31 1.73
2146 2822 2.165998 GGGATGATTGCCCAGCTTATC 58.834 52.381 0.00 0.00 45.31 1.75
2147 2823 2.224967 GGGATGATTGCCCAGCTTATCT 60.225 50.000 0.00 0.00 45.31 1.98
2148 2824 2.818432 GGATGATTGCCCAGCTTATCTG 59.182 50.000 0.00 0.00 42.49 2.90
2149 2825 3.497405 GGATGATTGCCCAGCTTATCTGA 60.497 47.826 0.00 0.00 45.72 3.27
2150 2826 3.870538 TGATTGCCCAGCTTATCTGAT 57.129 42.857 0.00 0.00 45.72 2.90
2151 2827 3.748083 TGATTGCCCAGCTTATCTGATC 58.252 45.455 0.00 0.00 45.72 2.92
2152 2828 2.245159 TTGCCCAGCTTATCTGATCG 57.755 50.000 0.00 0.00 45.72 3.69
2153 2829 1.123077 TGCCCAGCTTATCTGATCGT 58.877 50.000 0.00 0.00 45.72 3.73
2154 2830 2.316108 TGCCCAGCTTATCTGATCGTA 58.684 47.619 0.00 0.00 45.72 3.43
2155 2831 2.297315 TGCCCAGCTTATCTGATCGTAG 59.703 50.000 0.00 0.00 45.72 3.51
2171 2847 3.628008 TCGTAGCTTCATCAGTTAGGGA 58.372 45.455 0.00 0.00 0.00 4.20
2180 2856 9.732130 AGCTTCATCAGTTAGGGATAATTAATC 57.268 33.333 0.00 0.00 0.00 1.75
2181 2857 9.507329 GCTTCATCAGTTAGGGATAATTAATCA 57.493 33.333 0.00 0.00 36.20 2.57
2200 2876 8.862325 TTAATCAATGTTGAACTACATCTGGT 57.138 30.769 0.00 0.00 41.13 4.00
2202 2878 6.558771 TCAATGTTGAACTACATCTGGTTG 57.441 37.500 0.00 0.00 37.76 3.77
2204 2880 5.947228 ATGTTGAACTACATCTGGTTGTG 57.053 39.130 0.00 0.00 35.61 3.33
2207 2883 4.002906 TGAACTACATCTGGTTGTGGAC 57.997 45.455 2.95 0.00 35.61 4.02
2208 2884 2.743636 ACTACATCTGGTTGTGGACG 57.256 50.000 2.95 0.00 34.12 4.79
2209 2885 2.244695 ACTACATCTGGTTGTGGACGA 58.755 47.619 0.00 0.00 34.12 4.20
2210 2886 2.832129 ACTACATCTGGTTGTGGACGAT 59.168 45.455 0.00 0.00 34.12 3.73
2211 2887 2.859165 ACATCTGGTTGTGGACGATT 57.141 45.000 0.00 0.00 0.00 3.34
2212 2888 2.426522 ACATCTGGTTGTGGACGATTG 58.573 47.619 0.00 0.00 0.00 2.67
2239 2989 3.899052 ATCACATGGCAAAATTGGGAG 57.101 42.857 0.00 0.00 0.00 4.30
2242 2992 3.390639 TCACATGGCAAAATTGGGAGTTT 59.609 39.130 0.00 0.00 0.00 2.66
2251 3001 0.893727 ATTGGGAGTTTGGACGTGCC 60.894 55.000 4.04 0.43 37.10 5.01
2263 3013 1.749634 GGACGTGCCACTACTATGTCT 59.250 52.381 0.00 0.00 36.34 3.41
2265 3015 3.568853 GGACGTGCCACTACTATGTCTAT 59.431 47.826 0.00 0.00 36.34 1.98
2268 3018 4.202020 ACGTGCCACTACTATGTCTATGTG 60.202 45.833 0.00 0.00 0.00 3.21
2275 3025 7.495934 GCCACTACTATGTCTATGTGTTTGATT 59.504 37.037 0.00 0.00 0.00 2.57
2276 3026 8.820933 CCACTACTATGTCTATGTGTTTGATTG 58.179 37.037 0.00 0.00 0.00 2.67
2311 5347 5.590145 TGTGTGATGTCATTTTTCTGTTGG 58.410 37.500 0.00 0.00 0.00 3.77
2316 5352 5.185635 TGATGTCATTTTTCTGTTGGGATCC 59.814 40.000 1.92 1.92 0.00 3.36
2320 5356 4.949856 TCATTTTTCTGTTGGGATCCTAGC 59.050 41.667 12.58 8.56 0.00 3.42
2321 5357 4.657814 TTTTTCTGTTGGGATCCTAGCT 57.342 40.909 12.58 0.00 0.00 3.32
2322 5358 5.772393 TTTTTCTGTTGGGATCCTAGCTA 57.228 39.130 12.58 0.00 0.00 3.32
2323 5359 4.755266 TTTCTGTTGGGATCCTAGCTAC 57.245 45.455 12.58 1.22 0.00 3.58
2324 5360 2.679082 TCTGTTGGGATCCTAGCTACC 58.321 52.381 12.58 0.00 0.00 3.18
2327 5363 3.829601 CTGTTGGGATCCTAGCTACCTAG 59.170 52.174 12.58 0.00 40.64 3.02
2342 5387 2.482494 ACCTAGCTAACTTGCATCCCT 58.518 47.619 0.00 0.00 34.99 4.20
2350 5395 2.584835 ACTTGCATCCCTAGTTTGCA 57.415 45.000 7.23 7.23 44.12 4.08
2357 5402 4.142116 TGCATCCCTAGTTTGCAAATCATG 60.142 41.667 16.21 11.59 42.95 3.07
2358 5403 4.142093 GCATCCCTAGTTTGCAAATCATGT 60.142 41.667 16.21 1.02 36.40 3.21
2380 5563 6.472016 TGTTTTCTTCTGCATGGAGTACATA 58.528 36.000 14.43 0.00 37.84 2.29
2383 5566 5.521906 TCTTCTGCATGGAGTACATAGTC 57.478 43.478 14.43 0.00 37.84 2.59
2384 5567 4.956075 TCTTCTGCATGGAGTACATAGTCA 59.044 41.667 14.43 0.00 37.84 3.41
2385 5568 4.926140 TCTGCATGGAGTACATAGTCAG 57.074 45.455 14.43 0.00 37.84 3.51
2386 5569 3.068732 TCTGCATGGAGTACATAGTCAGC 59.931 47.826 14.43 0.00 37.84 4.26
2389 5572 3.388308 CATGGAGTACATAGTCAGCAGC 58.612 50.000 0.00 0.00 37.84 5.25
2393 5576 0.924090 GTACATAGTCAGCAGCGTGC 59.076 55.000 2.28 2.28 45.46 5.34
2394 5577 0.179111 TACATAGTCAGCAGCGTGCC 60.179 55.000 6.39 0.00 46.52 5.01
2409 5597 2.803492 GCGTGCCTGGTTATCTTCCTAG 60.803 54.545 0.00 0.00 0.00 3.02
2410 5598 2.803492 CGTGCCTGGTTATCTTCCTAGC 60.803 54.545 0.00 0.00 0.00 3.42
2412 5600 3.641906 GTGCCTGGTTATCTTCCTAGCTA 59.358 47.826 0.00 0.00 0.00 3.32
2413 5601 3.898123 TGCCTGGTTATCTTCCTAGCTAG 59.102 47.826 14.20 14.20 0.00 3.42
2414 5602 3.306433 GCCTGGTTATCTTCCTAGCTAGC 60.306 52.174 15.74 6.62 0.00 3.42
2415 5603 3.898123 CCTGGTTATCTTCCTAGCTAGCA 59.102 47.826 18.83 0.00 0.00 3.49
2416 5604 4.345257 CCTGGTTATCTTCCTAGCTAGCAA 59.655 45.833 18.83 6.04 0.00 3.91
2417 5605 5.510520 CCTGGTTATCTTCCTAGCTAGCAAG 60.511 48.000 17.07 17.07 0.00 4.01
2430 5618 3.791245 GCTAGCAAGCTAACAGACATCT 58.209 45.455 10.63 0.00 45.85 2.90
2432 5620 4.742659 GCTAGCAAGCTAACAGACATCTAC 59.257 45.833 10.63 0.00 45.85 2.59
2434 5622 4.753233 AGCAAGCTAACAGACATCTACAG 58.247 43.478 0.00 0.00 0.00 2.74
2435 5623 3.308323 GCAAGCTAACAGACATCTACAGC 59.692 47.826 0.00 0.00 0.00 4.40
2436 5624 3.810310 AGCTAACAGACATCTACAGCC 57.190 47.619 0.00 0.00 0.00 4.85
2437 5625 2.099921 AGCTAACAGACATCTACAGCCG 59.900 50.000 0.00 0.00 0.00 5.52
2439 5627 2.949451 AACAGACATCTACAGCCGAG 57.051 50.000 0.00 0.00 0.00 4.63
2440 5628 1.840737 ACAGACATCTACAGCCGAGT 58.159 50.000 0.00 0.00 0.00 4.18
2441 5629 1.746220 ACAGACATCTACAGCCGAGTC 59.254 52.381 0.00 0.00 0.00 3.36
2443 5631 0.733729 GACATCTACAGCCGAGTCGT 59.266 55.000 12.31 0.00 0.00 4.34
2445 5633 1.018148 CATCTACAGCCGAGTCGTCT 58.982 55.000 12.31 0.00 0.00 4.18
2448 5636 0.803117 CTACAGCCGAGTCGTCTCAA 59.197 55.000 12.31 0.00 40.44 3.02
2449 5637 1.199327 CTACAGCCGAGTCGTCTCAAA 59.801 52.381 12.31 0.00 40.44 2.69
2450 5638 0.318784 ACAGCCGAGTCGTCTCAAAC 60.319 55.000 12.31 0.00 40.44 2.93
2451 5639 1.009389 CAGCCGAGTCGTCTCAAACC 61.009 60.000 12.31 0.00 40.44 3.27
2452 5640 1.737008 GCCGAGTCGTCTCAAACCC 60.737 63.158 12.31 0.00 40.44 4.11
2455 5643 1.669211 CCGAGTCGTCTCAAACCCTTC 60.669 57.143 12.31 0.00 40.44 3.46
2456 5644 1.269998 CGAGTCGTCTCAAACCCTTCT 59.730 52.381 3.82 0.00 40.44 2.85
2458 5646 2.296471 GAGTCGTCTCAAACCCTTCTCA 59.704 50.000 4.72 0.00 40.18 3.27
2459 5647 2.698797 AGTCGTCTCAAACCCTTCTCAA 59.301 45.455 0.00 0.00 0.00 3.02
2460 5648 3.134081 AGTCGTCTCAAACCCTTCTCAAA 59.866 43.478 0.00 0.00 0.00 2.69
2462 5650 2.221055 CGTCTCAAACCCTTCTCAAACG 59.779 50.000 0.00 0.00 0.00 3.60
2463 5651 3.203716 GTCTCAAACCCTTCTCAAACGT 58.796 45.455 0.00 0.00 0.00 3.99
2464 5652 3.247886 GTCTCAAACCCTTCTCAAACGTC 59.752 47.826 0.00 0.00 0.00 4.34
2465 5653 2.548480 CTCAAACCCTTCTCAAACGTCC 59.452 50.000 0.00 0.00 0.00 4.79
2466 5654 1.263217 CAAACCCTTCTCAAACGTCCG 59.737 52.381 0.00 0.00 0.00 4.79
2467 5655 0.250166 AACCCTTCTCAAACGTCCGG 60.250 55.000 0.00 0.00 0.00 5.14
2468 5656 2.033194 CCCTTCTCAAACGTCCGGC 61.033 63.158 0.00 0.00 0.00 6.13
2469 5657 2.033194 CCTTCTCAAACGTCCGGCC 61.033 63.158 0.00 0.00 0.00 6.13
2470 5658 1.301401 CTTCTCAAACGTCCGGCCA 60.301 57.895 2.24 0.00 0.00 5.36
2471 5659 1.291877 CTTCTCAAACGTCCGGCCAG 61.292 60.000 2.24 0.00 0.00 4.85
2472 5660 3.423154 CTCAAACGTCCGGCCAGC 61.423 66.667 2.24 0.00 0.00 4.85
2485 5673 3.402681 CCAGCCCACCCGATCACT 61.403 66.667 0.00 0.00 0.00 3.41
2486 5674 2.124983 CAGCCCACCCGATCACTG 60.125 66.667 0.00 0.00 0.00 3.66
2487 5675 2.284625 AGCCCACCCGATCACTGA 60.285 61.111 0.00 0.00 0.00 3.41
2488 5676 1.690633 AGCCCACCCGATCACTGAT 60.691 57.895 0.00 0.00 0.00 2.90
2489 5677 1.227674 GCCCACCCGATCACTGATC 60.228 63.158 8.78 8.78 35.88 2.92
2498 5686 1.550065 GATCACTGATCGGTCACGTG 58.450 55.000 9.94 9.94 41.85 4.49
2499 5687 1.132453 GATCACTGATCGGTCACGTGA 59.868 52.381 23.79 23.79 41.84 4.35
2500 5688 0.240145 TCACTGATCGGTCACGTGAC 59.760 55.000 35.26 35.26 44.04 3.67
2518 5706 4.010575 CCAGGCGGGTGCATTAAA 57.989 55.556 0.00 0.00 45.35 1.52
2519 5707 1.510844 CCAGGCGGGTGCATTAAAC 59.489 57.895 0.00 0.00 45.35 2.01
2520 5708 1.247419 CCAGGCGGGTGCATTAAACA 61.247 55.000 0.00 0.00 45.35 2.83
2521 5709 0.171007 CAGGCGGGTGCATTAAACAG 59.829 55.000 0.00 0.00 45.35 3.16
2522 5710 0.965363 AGGCGGGTGCATTAAACAGG 60.965 55.000 0.00 0.00 45.35 4.00
2523 5711 1.153842 GCGGGTGCATTAAACAGGC 60.154 57.895 0.00 0.00 42.15 4.85
2524 5712 1.510844 CGGGTGCATTAAACAGGCC 59.489 57.895 0.00 0.00 0.00 5.19
2525 5713 0.965363 CGGGTGCATTAAACAGGCCT 60.965 55.000 0.00 0.00 0.00 5.19
2526 5714 0.817654 GGGTGCATTAAACAGGCCTC 59.182 55.000 0.00 0.00 0.00 4.70
2527 5715 1.544724 GGTGCATTAAACAGGCCTCA 58.455 50.000 0.00 0.00 0.00 3.86
2528 5716 1.892474 GGTGCATTAAACAGGCCTCAA 59.108 47.619 0.00 0.00 0.00 3.02
2529 5717 2.298729 GGTGCATTAAACAGGCCTCAAA 59.701 45.455 0.00 0.00 0.00 2.69
2530 5718 3.317150 GTGCATTAAACAGGCCTCAAAC 58.683 45.455 0.00 0.00 0.00 2.93
2531 5719 2.030363 TGCATTAAACAGGCCTCAAACG 60.030 45.455 0.00 0.00 0.00 3.60
2532 5720 2.030274 GCATTAAACAGGCCTCAAACGT 60.030 45.455 0.00 0.00 0.00 3.99
2533 5721 3.821841 CATTAAACAGGCCTCAAACGTC 58.178 45.455 0.00 0.00 0.00 4.34
2534 5722 1.886886 TAAACAGGCCTCAAACGTCC 58.113 50.000 0.00 0.00 0.00 4.79
2535 5723 1.164041 AAACAGGCCTCAAACGTCCG 61.164 55.000 0.00 0.00 0.00 4.79
2536 5724 2.742372 CAGGCCTCAAACGTCCGG 60.742 66.667 0.00 0.00 0.00 5.14
2537 5725 2.920912 AGGCCTCAAACGTCCGGA 60.921 61.111 0.00 0.00 0.00 5.14
2538 5726 2.741211 GGCCTCAAACGTCCGGAC 60.741 66.667 25.28 25.28 0.00 4.79
2539 5727 2.342648 GCCTCAAACGTCCGGACT 59.657 61.111 30.92 16.03 0.00 3.85
2540 5728 2.027625 GCCTCAAACGTCCGGACTG 61.028 63.158 30.92 24.96 0.00 3.51
2541 5729 1.663739 CCTCAAACGTCCGGACTGA 59.336 57.895 30.92 25.06 0.00 3.41
2542 5730 0.666577 CCTCAAACGTCCGGACTGAC 60.667 60.000 30.92 7.01 0.00 3.51
2543 5731 0.666577 CTCAAACGTCCGGACTGACC 60.667 60.000 30.92 5.95 31.35 4.02
2552 5740 2.048127 GGACTGACCGGCACACTC 60.048 66.667 0.00 0.86 0.00 3.51
2553 5741 2.734591 GACTGACCGGCACACTCA 59.265 61.111 0.00 0.00 0.00 3.41
2554 5742 1.293498 GACTGACCGGCACACTCAT 59.707 57.895 0.00 0.00 0.00 2.90
2555 5743 0.530744 GACTGACCGGCACACTCATA 59.469 55.000 0.00 0.00 0.00 2.15
2556 5744 1.137086 GACTGACCGGCACACTCATAT 59.863 52.381 0.00 0.00 0.00 1.78
2557 5745 1.137086 ACTGACCGGCACACTCATATC 59.863 52.381 0.00 0.00 0.00 1.63
2558 5746 0.464036 TGACCGGCACACTCATATCC 59.536 55.000 0.00 0.00 0.00 2.59
2559 5747 0.464036 GACCGGCACACTCATATCCA 59.536 55.000 0.00 0.00 0.00 3.41
2560 5748 0.465705 ACCGGCACACTCATATCCAG 59.534 55.000 0.00 0.00 0.00 3.86
2561 5749 0.882042 CCGGCACACTCATATCCAGC 60.882 60.000 0.00 0.00 0.00 4.85
2562 5750 0.882042 CGGCACACTCATATCCAGCC 60.882 60.000 0.00 0.00 37.32 4.85
2563 5751 0.536006 GGCACACTCATATCCAGCCC 60.536 60.000 0.00 0.00 34.71 5.19
2564 5752 0.181114 GCACACTCATATCCAGCCCA 59.819 55.000 0.00 0.00 0.00 5.36
2565 5753 1.408683 GCACACTCATATCCAGCCCAA 60.409 52.381 0.00 0.00 0.00 4.12
2566 5754 2.945440 GCACACTCATATCCAGCCCAAA 60.945 50.000 0.00 0.00 0.00 3.28
2567 5755 3.559069 CACACTCATATCCAGCCCAAAT 58.441 45.455 0.00 0.00 0.00 2.32
2568 5756 4.717877 CACACTCATATCCAGCCCAAATA 58.282 43.478 0.00 0.00 0.00 1.40
2569 5757 5.319453 CACACTCATATCCAGCCCAAATAT 58.681 41.667 0.00 0.00 0.00 1.28
2570 5758 5.182570 CACACTCATATCCAGCCCAAATATG 59.817 44.000 0.00 0.00 35.58 1.78
2571 5759 5.073554 ACACTCATATCCAGCCCAAATATGA 59.926 40.000 0.00 0.00 39.09 2.15
2573 5761 5.183530 TCATATCCAGCCCAAATATGAGG 57.816 43.478 0.00 0.00 37.43 3.86
2574 5762 2.299326 ATCCAGCCCAAATATGAGGC 57.701 50.000 3.28 3.28 40.91 4.70
2575 5763 0.925558 TCCAGCCCAAATATGAGGCA 59.074 50.000 12.12 0.00 42.20 4.75
2576 5764 1.133699 TCCAGCCCAAATATGAGGCAG 60.134 52.381 12.12 5.34 42.20 4.85
2577 5765 1.133699 CCAGCCCAAATATGAGGCAGA 60.134 52.381 12.12 0.00 42.20 4.26
2578 5766 2.490351 CCAGCCCAAATATGAGGCAGAT 60.490 50.000 12.12 0.00 42.20 2.90
2579 5767 3.245016 CCAGCCCAAATATGAGGCAGATA 60.245 47.826 12.12 0.00 42.20 1.98
2580 5768 3.755378 CAGCCCAAATATGAGGCAGATAC 59.245 47.826 12.12 0.00 42.20 2.24
2581 5769 2.744202 GCCCAAATATGAGGCAGATACG 59.256 50.000 6.13 0.00 40.54 3.06
2582 5770 3.807209 GCCCAAATATGAGGCAGATACGT 60.807 47.826 0.00 0.00 40.54 3.57
2583 5771 3.748048 CCCAAATATGAGGCAGATACGTG 59.252 47.826 0.00 0.00 0.00 4.49
2584 5772 3.748048 CCAAATATGAGGCAGATACGTGG 59.252 47.826 0.00 0.00 0.00 4.94
2585 5773 3.685139 AATATGAGGCAGATACGTGGG 57.315 47.619 0.00 0.00 0.00 4.61
2586 5774 0.679505 TATGAGGCAGATACGTGGGC 59.320 55.000 0.00 0.00 0.00 5.36
2587 5775 1.337384 ATGAGGCAGATACGTGGGCA 61.337 55.000 0.00 0.00 0.00 5.36
2588 5776 1.521681 GAGGCAGATACGTGGGCAC 60.522 63.158 0.00 0.00 0.00 5.01
2589 5777 1.961180 GAGGCAGATACGTGGGCACT 61.961 60.000 0.00 0.00 0.00 4.40
2590 5778 1.521681 GGCAGATACGTGGGCACTC 60.522 63.158 0.00 0.00 0.00 3.51
2591 5779 1.878522 GCAGATACGTGGGCACTCG 60.879 63.158 9.21 9.21 0.00 4.18
2592 5780 1.226974 CAGATACGTGGGCACTCGG 60.227 63.158 15.66 0.00 0.00 4.63
2593 5781 2.106332 GATACGTGGGCACTCGGG 59.894 66.667 15.66 0.00 0.00 5.14
2594 5782 4.157120 ATACGTGGGCACTCGGGC 62.157 66.667 15.66 0.00 42.44 6.13
2613 5801 4.175489 CGCCCGTCACGTCGATCT 62.175 66.667 0.00 0.00 0.00 2.75
2614 5802 2.579787 GCCCGTCACGTCGATCTG 60.580 66.667 0.00 0.00 0.00 2.90
2615 5803 2.102357 CCCGTCACGTCGATCTGG 59.898 66.667 0.00 0.00 0.00 3.86
2616 5804 2.579787 CCGTCACGTCGATCTGGC 60.580 66.667 0.00 0.00 0.00 4.85
2617 5805 2.579787 CGTCACGTCGATCTGGCC 60.580 66.667 0.00 0.00 0.00 5.36
2618 5806 2.202756 GTCACGTCGATCTGGCCC 60.203 66.667 0.00 0.00 0.00 5.80
2619 5807 3.822192 TCACGTCGATCTGGCCCG 61.822 66.667 0.00 0.00 0.00 6.13
2622 5810 4.812476 CGTCGATCTGGCCCGCAA 62.812 66.667 0.00 0.00 0.00 4.85
2623 5811 2.203070 GTCGATCTGGCCCGCAAT 60.203 61.111 0.00 0.00 0.00 3.56
2624 5812 2.203056 TCGATCTGGCCCGCAATG 60.203 61.111 0.00 0.00 0.00 2.82
2625 5813 2.203056 CGATCTGGCCCGCAATGA 60.203 61.111 0.00 0.00 0.00 2.57
2626 5814 2.537560 CGATCTGGCCCGCAATGAC 61.538 63.158 0.00 0.00 0.00 3.06
2627 5815 2.124151 ATCTGGCCCGCAATGACC 60.124 61.111 0.00 0.00 0.00 4.02
2628 5816 3.721370 ATCTGGCCCGCAATGACCC 62.721 63.158 0.00 0.00 0.00 4.46
2632 5820 4.740822 GCCCGCAATGACCCCACT 62.741 66.667 0.00 0.00 0.00 4.00
2633 5821 2.438434 CCCGCAATGACCCCACTC 60.438 66.667 0.00 0.00 0.00 3.51
2634 5822 2.438434 CCGCAATGACCCCACTCC 60.438 66.667 0.00 0.00 0.00 3.85
2635 5823 2.350895 CGCAATGACCCCACTCCA 59.649 61.111 0.00 0.00 0.00 3.86
2636 5824 1.746615 CGCAATGACCCCACTCCAG 60.747 63.158 0.00 0.00 0.00 3.86
2637 5825 2.048603 GCAATGACCCCACTCCAGC 61.049 63.158 0.00 0.00 0.00 4.85
2638 5826 1.379044 CAATGACCCCACTCCAGCC 60.379 63.158 0.00 0.00 0.00 4.85
2639 5827 2.616458 AATGACCCCACTCCAGCCC 61.616 63.158 0.00 0.00 0.00 5.19
2645 5833 3.579302 CCACTCCAGCCCCCACAA 61.579 66.667 0.00 0.00 0.00 3.33
2646 5834 2.520458 CACTCCAGCCCCCACAAA 59.480 61.111 0.00 0.00 0.00 2.83
2647 5835 1.077265 CACTCCAGCCCCCACAAAT 59.923 57.895 0.00 0.00 0.00 2.32
2648 5836 0.331278 CACTCCAGCCCCCACAAATA 59.669 55.000 0.00 0.00 0.00 1.40
2649 5837 1.063717 CACTCCAGCCCCCACAAATAT 60.064 52.381 0.00 0.00 0.00 1.28
2650 5838 2.174639 CACTCCAGCCCCCACAAATATA 59.825 50.000 0.00 0.00 0.00 0.86
2651 5839 3.063650 ACTCCAGCCCCCACAAATATAT 58.936 45.455 0.00 0.00 0.00 0.86
2652 5840 3.181429 ACTCCAGCCCCCACAAATATATG 60.181 47.826 0.00 0.00 0.00 1.78
2653 5841 3.059853 TCCAGCCCCCACAAATATATGA 58.940 45.455 0.00 0.00 0.00 2.15
2654 5842 3.157087 CCAGCCCCCACAAATATATGAC 58.843 50.000 0.00 0.00 0.00 3.06
2655 5843 3.436325 CCAGCCCCCACAAATATATGACA 60.436 47.826 0.00 0.00 0.00 3.58
2656 5844 4.214310 CAGCCCCCACAAATATATGACAA 58.786 43.478 0.00 0.00 0.00 3.18
2657 5845 4.037923 CAGCCCCCACAAATATATGACAAC 59.962 45.833 0.00 0.00 0.00 3.32
2658 5846 4.079212 AGCCCCCACAAATATATGACAACT 60.079 41.667 0.00 0.00 0.00 3.16
2659 5847 4.037923 GCCCCCACAAATATATGACAACTG 59.962 45.833 0.00 0.00 0.00 3.16
2660 5848 5.445069 CCCCCACAAATATATGACAACTGA 58.555 41.667 0.00 0.00 0.00 3.41
2661 5849 6.070656 CCCCCACAAATATATGACAACTGAT 58.929 40.000 0.00 0.00 0.00 2.90
2662 5850 6.016024 CCCCCACAAATATATGACAACTGATG 60.016 42.308 0.00 0.00 0.00 3.07
2663 5851 6.772233 CCCCACAAATATATGACAACTGATGA 59.228 38.462 0.00 0.00 0.00 2.92
2664 5852 7.040892 CCCCACAAATATATGACAACTGATGAG 60.041 40.741 0.00 0.00 0.00 2.90
2665 5853 7.358066 CCACAAATATATGACAACTGATGAGC 58.642 38.462 0.00 0.00 0.00 4.26
2666 5854 7.012610 CCACAAATATATGACAACTGATGAGCA 59.987 37.037 0.00 0.00 0.00 4.26
2667 5855 8.400186 CACAAATATATGACAACTGATGAGCAA 58.600 33.333 0.00 0.00 0.00 3.91
2668 5856 8.959548 ACAAATATATGACAACTGATGAGCAAA 58.040 29.630 0.00 0.00 0.00 3.68
2674 5862 4.756642 TGACAACTGATGAGCAAACCTTAG 59.243 41.667 0.00 0.00 0.00 2.18
2678 5866 4.973168 ACTGATGAGCAAACCTTAGTCAA 58.027 39.130 0.00 0.00 0.00 3.18
2685 5873 5.221722 TGAGCAAACCTTAGTCAATCTCAGT 60.222 40.000 0.00 0.00 0.00 3.41
2690 5878 4.597004 ACCTTAGTCAATCTCAGTCCGTA 58.403 43.478 0.00 0.00 0.00 4.02
2691 5879 4.398673 ACCTTAGTCAATCTCAGTCCGTAC 59.601 45.833 0.00 0.00 0.00 3.67
2694 5882 3.687125 AGTCAATCTCAGTCCGTACTCA 58.313 45.455 0.00 0.00 31.97 3.41
2695 5883 3.440872 AGTCAATCTCAGTCCGTACTCAC 59.559 47.826 0.00 0.00 31.97 3.51
2696 5884 3.440872 GTCAATCTCAGTCCGTACTCACT 59.559 47.826 0.00 0.00 31.97 3.41
2698 5886 1.723220 TCTCAGTCCGTACTCACTCG 58.277 55.000 0.00 0.00 31.97 4.18
2699 5887 1.274447 TCTCAGTCCGTACTCACTCGA 59.726 52.381 0.00 0.00 31.97 4.04
2701 5889 0.447011 CAGTCCGTACTCACTCGACC 59.553 60.000 0.00 0.00 31.97 4.79
2703 5891 0.726256 GTCCGTACTCACTCGACCTC 59.274 60.000 0.00 0.00 0.00 3.85
2707 5895 1.675116 CGTACTCACTCGACCTCTCCA 60.675 57.143 0.00 0.00 0.00 3.86
2708 5896 1.738908 GTACTCACTCGACCTCTCCAC 59.261 57.143 0.00 0.00 0.00 4.02
2711 5899 1.470890 CTCACTCGACCTCTCCACTTC 59.529 57.143 0.00 0.00 0.00 3.01
2714 5902 1.099689 CTCGACCTCTCCACTTCTCC 58.900 60.000 0.00 0.00 0.00 3.71
2716 5904 1.324005 CGACCTCTCCACTTCTCCCC 61.324 65.000 0.00 0.00 0.00 4.81
2717 5905 0.978667 GACCTCTCCACTTCTCCCCC 60.979 65.000 0.00 0.00 0.00 5.40
2719 5907 0.547712 CCTCTCCACTTCTCCCCCAA 60.548 60.000 0.00 0.00 0.00 4.12
2721 5909 1.918957 CTCTCCACTTCTCCCCCAAAT 59.081 52.381 0.00 0.00 0.00 2.32
2722 5910 1.916181 TCTCCACTTCTCCCCCAAATC 59.084 52.381 0.00 0.00 0.00 2.17
2724 5912 0.704076 CCACTTCTCCCCCAAATCCA 59.296 55.000 0.00 0.00 0.00 3.41
2727 5915 2.073776 ACTTCTCCCCCAAATCCACTT 58.926 47.619 0.00 0.00 0.00 3.16
2731 5919 0.326927 TCCCCCAAATCCACTTCGTC 59.673 55.000 0.00 0.00 0.00 4.20
2732 5920 0.328258 CCCCCAAATCCACTTCGTCT 59.672 55.000 0.00 0.00 0.00 4.18
2734 5922 2.084546 CCCCAAATCCACTTCGTCTTC 58.915 52.381 0.00 0.00 0.00 2.87
2735 5923 2.084546 CCCAAATCCACTTCGTCTTCC 58.915 52.381 0.00 0.00 0.00 3.46
2736 5924 2.084546 CCAAATCCACTTCGTCTTCCC 58.915 52.381 0.00 0.00 0.00 3.97
2737 5925 2.084546 CAAATCCACTTCGTCTTCCCC 58.915 52.381 0.00 0.00 0.00 4.81
2739 5927 1.614241 ATCCACTTCGTCTTCCCCCG 61.614 60.000 0.00 0.00 0.00 5.73
2740 5928 2.434359 CACTTCGTCTTCCCCCGC 60.434 66.667 0.00 0.00 0.00 6.13
2753 5941 4.100084 CCCGCCTGCCATGTCTGA 62.100 66.667 0.00 0.00 0.00 3.27
2754 5942 2.821366 CCGCCTGCCATGTCTGAC 60.821 66.667 0.00 0.00 0.00 3.51
2758 5946 1.303799 GCCTGCCATGTCTGACAGTG 61.304 60.000 16.46 13.25 0.00 3.66
2759 5947 0.322648 CCTGCCATGTCTGACAGTGA 59.677 55.000 16.46 0.00 0.00 3.41
2761 5949 2.617276 CCTGCCATGTCTGACAGTGAAT 60.617 50.000 16.46 0.00 0.00 2.57
2762 5950 2.676839 CTGCCATGTCTGACAGTGAATC 59.323 50.000 16.46 3.12 0.00 2.52
2765 5953 3.618263 GCCATGTCTGACAGTGAATCTGA 60.618 47.826 16.46 0.00 46.27 3.27
2768 5956 4.879197 TGTCTGACAGTGAATCTGACAT 57.121 40.909 15.22 0.00 44.94 3.06
2770 5958 5.714047 TGTCTGACAGTGAATCTGACATAC 58.286 41.667 15.22 5.63 44.94 2.39
2772 5960 4.108336 CTGACAGTGAATCTGACATACCG 58.892 47.826 0.00 0.00 44.61 4.02
2773 5961 3.119137 TGACAGTGAATCTGACATACCGG 60.119 47.826 0.00 0.00 46.27 5.28
2776 5964 4.162320 ACAGTGAATCTGACATACCGGAAT 59.838 41.667 9.46 0.00 46.27 3.01
2777 5965 4.509230 CAGTGAATCTGACATACCGGAATG 59.491 45.833 9.46 0.00 46.27 2.67
2778 5966 3.809832 GTGAATCTGACATACCGGAATGG 59.190 47.826 9.46 0.00 46.41 3.16
2782 5970 1.138859 CTGACATACCGGAATGGCTCA 59.861 52.381 9.46 0.00 43.94 4.26
2784 5972 2.213499 GACATACCGGAATGGCTCAAG 58.787 52.381 9.46 0.00 43.94 3.02
2786 5974 0.179018 ATACCGGAATGGCTCAAGGC 60.179 55.000 9.46 0.00 43.94 4.35
2808 5996 2.031163 GGGGATTCCGATGGCTCG 59.969 66.667 0.00 0.28 44.62 5.03
2809 5997 2.808206 GGGGATTCCGATGGCTCGT 61.808 63.158 0.00 0.00 43.49 4.18
2810 5998 1.301009 GGGATTCCGATGGCTCGTC 60.301 63.158 0.00 0.00 43.49 4.20
2812 6000 1.359117 GATTCCGATGGCTCGTCGA 59.641 57.895 15.58 0.00 44.49 4.20
2814 6002 1.663379 ATTCCGATGGCTCGTCGACA 61.663 55.000 17.16 1.87 44.49 4.35
2815 6003 2.537792 TTCCGATGGCTCGTCGACAC 62.538 60.000 17.16 3.93 44.49 3.67
2816 6004 2.579787 CGATGGCTCGTCGACACC 60.580 66.667 17.16 13.86 44.49 4.16
2817 6005 2.202756 GATGGCTCGTCGACACCC 60.203 66.667 17.16 12.31 29.57 4.61
2826 6014 4.631773 TCGACACCCGACTAGGAG 57.368 61.111 0.00 0.00 43.23 3.69
2827 6015 1.077930 TCGACACCCGACTAGGAGG 60.078 63.158 0.00 0.00 43.23 4.30
2829 6017 1.096386 CGACACCCGACTAGGAGGAG 61.096 65.000 7.26 0.00 45.00 3.69
2831 6019 1.076632 CACCCGACTAGGAGGAGCT 60.077 63.158 7.26 0.00 45.00 4.09
2832 6020 0.183014 CACCCGACTAGGAGGAGCTA 59.817 60.000 7.26 0.00 45.00 3.32
2833 6021 0.475044 ACCCGACTAGGAGGAGCTAG 59.525 60.000 7.26 0.00 45.00 3.42
2834 6022 0.891904 CCCGACTAGGAGGAGCTAGC 60.892 65.000 6.62 6.62 45.00 3.42
2836 6024 1.847890 CGACTAGGAGGAGCTAGCGC 61.848 65.000 10.35 10.35 0.00 5.92
2853 6041 2.825836 CTCCGCATTGCCCTCCAC 60.826 66.667 2.41 0.00 0.00 4.02
2856 6044 4.776322 CGCATTGCCCTCCACCGA 62.776 66.667 2.41 0.00 0.00 4.69
2857 6045 2.124151 GCATTGCCCTCCACCGAT 60.124 61.111 0.00 0.00 0.00 4.18
2858 6046 2.189499 GCATTGCCCTCCACCGATC 61.189 63.158 0.00 0.00 0.00 3.69
2859 6047 1.224315 CATTGCCCTCCACCGATCA 59.776 57.895 0.00 0.00 0.00 2.92
2860 6048 1.097547 CATTGCCCTCCACCGATCAC 61.098 60.000 0.00 0.00 0.00 3.06
2862 6050 2.184020 TTGCCCTCCACCGATCACTG 62.184 60.000 0.00 0.00 0.00 3.66
2864 6052 2.362369 CCCTCCACCGATCACTGCT 61.362 63.158 0.00 0.00 0.00 4.24
2865 6053 1.153489 CCTCCACCGATCACTGCTG 60.153 63.158 0.00 0.00 0.00 4.41
2866 6054 1.153489 CTCCACCGATCACTGCTGG 60.153 63.158 0.00 0.00 0.00 4.85
2868 6056 0.977627 TCCACCGATCACTGCTGGAT 60.978 55.000 0.00 0.00 0.00 3.41
2873 6061 1.070445 GATCACTGCTGGATCGGGG 59.930 63.158 0.00 0.00 32.62 5.73
2874 6062 3.112205 ATCACTGCTGGATCGGGGC 62.112 63.158 0.00 0.00 0.00 5.80
2881 6069 4.122149 TGGATCGGGGCGGCAAAT 62.122 61.111 12.47 0.00 0.00 2.32
2882 6070 3.287520 GGATCGGGGCGGCAAATC 61.288 66.667 12.47 9.95 0.00 2.17
2883 6071 3.287520 GATCGGGGCGGCAAATCC 61.288 66.667 12.47 0.86 0.00 3.01
2884 6072 3.774599 GATCGGGGCGGCAAATCCT 62.775 63.158 12.47 0.00 0.00 3.24
2885 6073 3.774599 ATCGGGGCGGCAAATCCTC 62.775 63.158 12.47 0.00 0.00 3.71
2886 6074 4.489771 CGGGGCGGCAAATCCTCT 62.490 66.667 12.47 0.00 0.00 3.69
2887 6075 2.043953 GGGGCGGCAAATCCTCTT 60.044 61.111 12.47 0.00 0.00 2.85
2888 6076 2.121538 GGGGCGGCAAATCCTCTTC 61.122 63.158 12.47 0.00 0.00 2.87
2889 6077 2.121538 GGGCGGCAAATCCTCTTCC 61.122 63.158 12.47 0.00 0.00 3.46
2890 6078 2.472909 GGCGGCAAATCCTCTTCCG 61.473 63.158 3.07 0.00 42.68 4.30
2891 6079 2.472909 GCGGCAAATCCTCTTCCGG 61.473 63.158 0.00 0.00 40.37 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.651962 TGATGGTGGTTCAGTTATCCGATA 59.348 41.667 0.00 0.00 0.00 2.92
6 7 4.192317 GAGTGATGGTGGTTCAGTTATCC 58.808 47.826 0.00 0.00 0.00 2.59
23 24 6.340522 TGCTAGATCGATTTTCATTGAGTGA 58.659 36.000 0.00 0.00 34.25 3.41
28 29 7.427606 GTCAGTTTGCTAGATCGATTTTCATTG 59.572 37.037 0.00 0.00 0.00 2.82
76 77 2.843701 AGTGGCCAGATCGATTTCATC 58.156 47.619 5.11 0.00 0.00 2.92
80 81 3.199880 CCTAAGTGGCCAGATCGATTT 57.800 47.619 5.11 0.00 0.00 2.17
131 132 4.043435 CCTCTAAAATCCCCTTCCCCTATG 59.957 50.000 0.00 0.00 0.00 2.23
133 134 3.279302 TCCTCTAAAATCCCCTTCCCCTA 59.721 47.826 0.00 0.00 0.00 3.53
135 136 2.499515 TCCTCTAAAATCCCCTTCCCC 58.500 52.381 0.00 0.00 0.00 4.81
190 191 5.221581 GGGGATTGATGATTCAAAGGGATTG 60.222 44.000 0.00 0.00 44.70 2.67
194 195 2.967887 GGGGGATTGATGATTCAAAGGG 59.032 50.000 0.00 0.00 44.70 3.95
217 218 8.733458 CAAACTCCTCTGAAATATGTTGAATGA 58.267 33.333 0.00 0.00 0.00 2.57
220 221 6.071952 GCCAAACTCCTCTGAAATATGTTGAA 60.072 38.462 0.00 0.00 0.00 2.69
231 232 4.017808 GACTACTAGCCAAACTCCTCTGA 58.982 47.826 0.00 0.00 0.00 3.27
272 273 0.037326 TAGCAGCAACTCCTCCAACG 60.037 55.000 0.00 0.00 0.00 4.10
289 290 0.395862 TCCTTCGTCTCTGCCCCTAG 60.396 60.000 0.00 0.00 0.00 3.02
290 291 0.395862 CTCCTTCGTCTCTGCCCCTA 60.396 60.000 0.00 0.00 0.00 3.53
297 298 1.653094 CTCGCAGCTCCTTCGTCTCT 61.653 60.000 0.00 0.00 0.00 3.10
322 323 1.090052 CCCTCGCGGAACAAGATTCC 61.090 60.000 6.13 0.00 35.27 3.01
329 330 3.766691 GTAGCCCCTCGCGGAACA 61.767 66.667 6.13 0.00 44.76 3.18
335 336 3.597728 CCTCTCGTAGCCCCTCGC 61.598 72.222 0.00 0.00 37.98 5.03
418 706 1.133025 CCGTCAGCCCATTTGATTCAC 59.867 52.381 0.00 0.00 0.00 3.18
473 762 3.267031 AGGTTTGAAGAGGATTACAGGGG 59.733 47.826 0.00 0.00 0.00 4.79
476 765 5.877564 GGAAGAGGTTTGAAGAGGATTACAG 59.122 44.000 0.00 0.00 0.00 2.74
517 806 5.053145 GTCAGTTTGCTAGATCGATTCCAT 58.947 41.667 0.00 0.00 0.00 3.41
520 809 6.654793 AAAGTCAGTTTGCTAGATCGATTC 57.345 37.500 0.00 0.00 0.00 2.52
521 810 7.440523 AAAAAGTCAGTTTGCTAGATCGATT 57.559 32.000 0.00 0.00 0.00 3.34
545 834 1.393603 TTGGCGATTGTTGTGTCCAA 58.606 45.000 0.00 0.00 0.00 3.53
547 836 2.500509 TTTTGGCGATTGTTGTGTCC 57.499 45.000 0.00 0.00 0.00 4.02
548 837 2.794350 CCTTTTTGGCGATTGTTGTGTC 59.206 45.455 0.00 0.00 0.00 3.67
561 850 2.094026 GCCCATTCTAGTGCCTTTTTGG 60.094 50.000 0.00 0.00 39.35 3.28
583 872 3.303938 TGAGGTTTCCATCTTGGCAAAA 58.696 40.909 0.00 0.00 37.47 2.44
604 905 3.650950 ACCAATGGCGCACCTCCT 61.651 61.111 10.83 0.00 36.63 3.69
621 922 6.993308 TGAACTAGTATAAGTTTTGTGGTGCA 59.007 34.615 0.00 0.00 39.78 4.57
637 938 9.582431 GCAATGTAGATTACTTGTGAACTAGTA 57.418 33.333 0.00 1.36 34.09 1.82
638 939 7.275779 CGCAATGTAGATTACTTGTGAACTAGT 59.724 37.037 3.18 3.18 36.08 2.57
639 940 7.275779 ACGCAATGTAGATTACTTGTGAACTAG 59.724 37.037 13.61 0.00 34.48 2.57
684 985 8.494433 TGAAAATGCTGGTAGATAAATACTCCT 58.506 33.333 0.00 0.00 0.00 3.69
696 997 7.727331 TTTCCAAATTTGAAAATGCTGGTAG 57.273 32.000 19.86 0.00 35.36 3.18
698 999 7.284944 TGATTTTCCAAATTTGAAAATGCTGGT 59.715 29.630 27.37 14.98 38.26 4.00
716 1017 3.339141 GTCACTCCTGAGGTGATTTTCC 58.661 50.000 7.67 0.00 44.04 3.13
717 1018 2.996621 CGTCACTCCTGAGGTGATTTTC 59.003 50.000 7.67 0.00 44.04 2.29
723 1024 2.099652 TTGCCGTCACTCCTGAGGTG 62.100 60.000 0.00 0.00 36.17 4.00
730 1031 1.197721 CAAGACAATTGCCGTCACTCC 59.802 52.381 5.05 0.00 35.77 3.85
734 1035 2.805671 CACTACAAGACAATTGCCGTCA 59.194 45.455 5.05 0.00 35.77 4.35
737 1038 2.151202 ACCACTACAAGACAATTGCCG 58.849 47.619 5.05 0.00 0.00 5.69
738 1039 3.127030 GCTACCACTACAAGACAATTGCC 59.873 47.826 5.05 0.00 0.00 4.52
739 1040 3.181520 CGCTACCACTACAAGACAATTGC 60.182 47.826 5.05 0.00 0.00 3.56
740 1041 3.370978 CCGCTACCACTACAAGACAATTG 59.629 47.826 3.24 3.24 0.00 2.32
741 1042 3.259876 TCCGCTACCACTACAAGACAATT 59.740 43.478 0.00 0.00 0.00 2.32
742 1043 2.829720 TCCGCTACCACTACAAGACAAT 59.170 45.455 0.00 0.00 0.00 2.71
743 1044 2.230508 CTCCGCTACCACTACAAGACAA 59.769 50.000 0.00 0.00 0.00 3.18
744 1045 1.816835 CTCCGCTACCACTACAAGACA 59.183 52.381 0.00 0.00 0.00 3.41
779 1080 2.757894 TGCTCACCAAAAAGGGGTAA 57.242 45.000 0.00 0.00 43.37 2.85
781 1082 1.133199 TCATGCTCACCAAAAAGGGGT 60.133 47.619 0.00 0.00 43.37 4.95
782 1083 1.547372 CTCATGCTCACCAAAAAGGGG 59.453 52.381 0.00 0.00 44.73 4.79
783 1084 1.067354 GCTCATGCTCACCAAAAAGGG 60.067 52.381 0.00 0.00 37.77 3.95
784 1085 1.614903 TGCTCATGCTCACCAAAAAGG 59.385 47.619 0.00 0.00 41.21 3.11
785 1086 2.669364 GTGCTCATGCTCACCAAAAAG 58.331 47.619 6.04 0.00 40.48 2.27
787 1088 0.592637 CGTGCTCATGCTCACCAAAA 59.407 50.000 10.28 0.00 40.48 2.44
788 1089 1.236616 CCGTGCTCATGCTCACCAAA 61.237 55.000 10.28 0.00 40.48 3.28
789 1090 1.672030 CCGTGCTCATGCTCACCAA 60.672 57.895 10.28 0.00 40.48 3.67
790 1091 2.046988 CCGTGCTCATGCTCACCA 60.047 61.111 10.28 0.00 40.48 4.17
791 1092 2.046892 ACCGTGCTCATGCTCACC 60.047 61.111 10.28 0.00 40.48 4.02
792 1093 0.950555 TTGACCGTGCTCATGCTCAC 60.951 55.000 6.98 6.98 40.48 3.51
793 1094 0.671472 CTTGACCGTGCTCATGCTCA 60.671 55.000 0.00 0.00 40.48 4.26
794 1095 0.390340 TCTTGACCGTGCTCATGCTC 60.390 55.000 0.00 0.00 40.48 4.26
795 1096 0.251354 ATCTTGACCGTGCTCATGCT 59.749 50.000 0.00 0.00 40.48 3.79
802 1103 1.795768 TTGACTCATCTTGACCGTGC 58.204 50.000 0.00 0.00 0.00 5.34
812 1113 2.480419 CCACCAGAACGTTTGACTCATC 59.520 50.000 0.46 0.00 0.00 2.92
863 1183 2.094675 CGTGGCCATTGAGGAGAAATT 58.905 47.619 9.72 0.00 41.22 1.82
871 1191 2.741985 TGTCGCGTGGCCATTGAG 60.742 61.111 9.72 7.08 0.00 3.02
901 1222 2.224646 GGAGGCAGGTGAAAAGAAGACT 60.225 50.000 0.00 0.00 0.00 3.24
927 1269 2.879026 GACCAGAAAAGCTCCGAGTTTT 59.121 45.455 4.51 4.51 29.65 2.43
931 1273 1.548269 AGAGACCAGAAAAGCTCCGAG 59.452 52.381 0.00 0.00 0.00 4.63
932 1274 1.546476 GAGAGACCAGAAAAGCTCCGA 59.454 52.381 0.00 0.00 0.00 4.55
934 1276 1.905894 AGGAGAGACCAGAAAAGCTCC 59.094 52.381 0.00 0.00 41.65 4.70
935 1277 3.694043 AAGGAGAGACCAGAAAAGCTC 57.306 47.619 0.00 0.00 42.04 4.09
937 1279 3.078097 GGAAAGGAGAGACCAGAAAAGC 58.922 50.000 0.00 0.00 42.04 3.51
939 1281 4.503296 CGAAGGAAAGGAGAGACCAGAAAA 60.503 45.833 0.00 0.00 42.04 2.29
945 1287 2.689646 CAACGAAGGAAAGGAGAGACC 58.310 52.381 0.00 0.00 39.35 3.85
946 1288 2.070028 GCAACGAAGGAAAGGAGAGAC 58.930 52.381 0.00 0.00 0.00 3.36
962 1307 0.179140 CTCCTCTCTCTCGCTGCAAC 60.179 60.000 0.00 0.00 0.00 4.17
1461 1912 4.711949 CTGCTGTCGGGCTTGCCT 62.712 66.667 11.71 0.00 0.00 4.75
1604 2139 3.047718 TAGTCGAGCGCCTTGTCGG 62.048 63.158 15.52 0.00 36.81 4.79
1649 2189 1.442526 GATGTGCTTGATGGCGAGGG 61.443 60.000 0.00 0.00 34.52 4.30
1774 2331 3.199946 AGGAACACAAGACAGAGGTTTGA 59.800 43.478 0.00 0.00 0.00 2.69
1784 2347 0.606673 GCCAGGGAGGAACACAAGAC 60.607 60.000 0.00 0.00 41.22 3.01
1785 2348 1.059584 TGCCAGGGAGGAACACAAGA 61.060 55.000 0.00 0.00 41.22 3.02
1788 2351 1.133181 TGATGCCAGGGAGGAACACA 61.133 55.000 0.00 0.00 41.22 3.72
1801 2373 2.945008 TCGGAAATGTCAGATTGATGCC 59.055 45.455 0.00 0.00 0.00 4.40
1816 2419 9.208022 GAGATGAACATGATGTATAATCGGAAA 57.792 33.333 0.00 0.00 0.00 3.13
1820 2423 8.645487 CAGTGAGATGAACATGATGTATAATCG 58.355 37.037 0.00 0.00 0.00 3.34
1821 2424 8.441608 GCAGTGAGATGAACATGATGTATAATC 58.558 37.037 0.00 2.95 0.00 1.75
1822 2425 7.935210 TGCAGTGAGATGAACATGATGTATAAT 59.065 33.333 0.00 0.00 0.00 1.28
1824 2427 6.819284 TGCAGTGAGATGAACATGATGTATA 58.181 36.000 0.00 0.00 0.00 1.47
1827 2430 3.939592 CTGCAGTGAGATGAACATGATGT 59.060 43.478 5.25 0.00 0.00 3.06
1828 2431 4.189231 TCTGCAGTGAGATGAACATGATG 58.811 43.478 14.67 0.00 0.00 3.07
1829 2432 4.482952 TCTGCAGTGAGATGAACATGAT 57.517 40.909 14.67 0.00 0.00 2.45
1830 2433 3.967332 TCTGCAGTGAGATGAACATGA 57.033 42.857 14.67 0.00 0.00 3.07
1831 2434 5.277393 GCTAATCTGCAGTGAGATGAACATG 60.277 44.000 14.67 0.00 32.77 3.21
1879 2497 2.675348 GTGAGCTGGCTAATCTGTTGAC 59.325 50.000 0.00 0.00 0.00 3.18
1898 2516 1.294780 GAGGTGCTCCAGTCCAGTG 59.705 63.158 7.70 0.00 35.89 3.66
1903 2521 1.188219 TCAGGTGAGGTGCTCCAGTC 61.188 60.000 7.70 0.00 35.89 3.51
1905 2523 0.177604 GATCAGGTGAGGTGCTCCAG 59.822 60.000 7.70 0.00 35.89 3.86
1908 2526 0.749649 ATCGATCAGGTGAGGTGCTC 59.250 55.000 0.00 0.00 0.00 4.26
1909 2527 1.134580 CAATCGATCAGGTGAGGTGCT 60.135 52.381 0.00 0.00 0.00 4.40
1910 2528 1.134699 TCAATCGATCAGGTGAGGTGC 60.135 52.381 0.00 0.00 0.00 5.01
1911 2529 2.819115 CTCAATCGATCAGGTGAGGTG 58.181 52.381 14.47 0.15 35.01 4.00
1914 2532 1.411977 AGCCTCAATCGATCAGGTGAG 59.588 52.381 19.66 17.46 37.77 3.51
1915 2533 1.489481 AGCCTCAATCGATCAGGTGA 58.511 50.000 19.66 10.33 0.00 4.02
1916 2534 3.583806 GATAGCCTCAATCGATCAGGTG 58.416 50.000 19.66 6.82 0.00 4.00
1917 2535 3.951775 GATAGCCTCAATCGATCAGGT 57.048 47.619 19.66 11.77 0.00 4.00
1924 2542 3.381590 TCCATATCCGATAGCCTCAATCG 59.618 47.826 0.00 0.00 44.51 3.34
1925 2543 5.344743 TTCCATATCCGATAGCCTCAATC 57.655 43.478 0.00 0.00 0.00 2.67
1926 2544 5.965033 ATTCCATATCCGATAGCCTCAAT 57.035 39.130 0.00 0.00 0.00 2.57
1927 2545 5.762179 AATTCCATATCCGATAGCCTCAA 57.238 39.130 0.00 0.00 0.00 3.02
1928 2546 6.630413 GCTTAATTCCATATCCGATAGCCTCA 60.630 42.308 0.00 0.00 0.00 3.86
1929 2547 5.755861 GCTTAATTCCATATCCGATAGCCTC 59.244 44.000 0.00 0.00 0.00 4.70
1930 2548 5.396884 GGCTTAATTCCATATCCGATAGCCT 60.397 44.000 0.00 0.00 40.86 4.58
1931 2549 4.816925 GGCTTAATTCCATATCCGATAGCC 59.183 45.833 0.00 0.00 37.83 3.93
1932 2550 5.428253 TGGCTTAATTCCATATCCGATAGC 58.572 41.667 0.00 0.00 0.00 2.97
1933 2551 6.017605 GCATGGCTTAATTCCATATCCGATAG 60.018 42.308 8.54 0.00 42.11 2.08
1934 2552 5.822519 GCATGGCTTAATTCCATATCCGATA 59.177 40.000 8.54 0.00 42.11 2.92
1935 2553 4.641989 GCATGGCTTAATTCCATATCCGAT 59.358 41.667 8.54 0.00 42.11 4.18
1936 2554 4.009675 GCATGGCTTAATTCCATATCCGA 58.990 43.478 8.54 0.00 42.11 4.55
1937 2555 4.012374 AGCATGGCTTAATTCCATATCCG 58.988 43.478 8.54 0.50 42.11 4.18
1938 2556 5.012239 TCAGCATGGCTTAATTCCATATCC 58.988 41.667 8.54 2.86 42.11 2.59
1939 2557 6.561614 CATCAGCATGGCTTAATTCCATATC 58.438 40.000 8.54 5.26 42.11 1.63
1940 2558 5.105473 GCATCAGCATGGCTTAATTCCATAT 60.105 40.000 8.54 0.62 42.11 1.78
1941 2559 4.219070 GCATCAGCATGGCTTAATTCCATA 59.781 41.667 8.54 0.00 42.11 2.74
1942 2560 3.006537 GCATCAGCATGGCTTAATTCCAT 59.993 43.478 0.00 4.13 44.70 3.41
1943 2561 2.363038 GCATCAGCATGGCTTAATTCCA 59.637 45.455 0.00 0.00 36.40 3.53
1944 2562 2.626743 AGCATCAGCATGGCTTAATTCC 59.373 45.455 0.00 0.00 45.49 3.01
1947 2565 2.236766 GGAGCATCAGCATGGCTTAAT 58.763 47.619 0.00 0.00 45.49 1.40
1948 2566 1.064537 TGGAGCATCAGCATGGCTTAA 60.065 47.619 0.00 0.00 45.49 1.85
1960 2588 3.944087 AGTAACTGAAAGGTGGAGCATC 58.056 45.455 0.00 0.00 39.30 3.91
1966 2594 8.842358 TGATAAACTAAGTAACTGAAAGGTGG 57.158 34.615 0.00 0.00 39.30 4.61
1985 2613 7.701539 ACCACAAGTCTGCATAATTGATAAA 57.298 32.000 17.64 0.00 0.00 1.40
1986 2614 7.701539 AACCACAAGTCTGCATAATTGATAA 57.298 32.000 17.64 0.00 0.00 1.75
1988 2616 6.209192 TGAAACCACAAGTCTGCATAATTGAT 59.791 34.615 17.64 1.36 0.00 2.57
1990 2618 5.771469 TGAAACCACAAGTCTGCATAATTG 58.229 37.500 10.30 10.30 0.00 2.32
1991 2619 5.536161 ACTGAAACCACAAGTCTGCATAATT 59.464 36.000 0.00 0.00 0.00 1.40
2023 2699 4.612259 GCATGGCAGCAGATTAATCTAACG 60.612 45.833 17.53 9.66 34.85 3.18
2026 2702 4.362470 AGCATGGCAGCAGATTAATCTA 57.638 40.909 17.53 1.79 34.85 1.98
2038 2714 4.399004 AAAGTAGAGAGTAGCATGGCAG 57.601 45.455 0.00 0.00 0.00 4.85
2073 2749 9.607988 TGAATTAAACACAAGTAGAGAGTTTCA 57.392 29.630 0.00 0.00 34.58 2.69
2077 2753 9.220767 GGAATGAATTAAACACAAGTAGAGAGT 57.779 33.333 0.00 0.00 0.00 3.24
2078 2754 9.442047 AGGAATGAATTAAACACAAGTAGAGAG 57.558 33.333 0.00 0.00 0.00 3.20
2079 2755 9.219603 CAGGAATGAATTAAACACAAGTAGAGA 57.780 33.333 0.00 0.00 0.00 3.10
2080 2756 8.454106 CCAGGAATGAATTAAACACAAGTAGAG 58.546 37.037 0.00 0.00 0.00 2.43
2081 2757 8.160765 TCCAGGAATGAATTAAACACAAGTAGA 58.839 33.333 0.00 0.00 0.00 2.59
2085 2761 6.086222 CGTCCAGGAATGAATTAAACACAAG 58.914 40.000 0.00 0.00 0.00 3.16
2098 2774 1.889105 CATCGGCCGTCCAGGAATG 60.889 63.158 27.15 15.62 45.00 2.67
2120 2796 3.780307 GGGCAATCATCCCATGGAT 57.220 52.632 15.22 1.70 44.21 3.41
2126 2802 2.165998 GATAAGCTGGGCAATCATCCC 58.834 52.381 0.00 0.00 44.17 3.85
2131 2807 2.740981 CGATCAGATAAGCTGGGCAATC 59.259 50.000 0.00 0.00 44.98 2.67
2133 2809 1.486310 ACGATCAGATAAGCTGGGCAA 59.514 47.619 0.00 0.00 44.98 4.52
2134 2810 1.123077 ACGATCAGATAAGCTGGGCA 58.877 50.000 0.00 0.00 44.98 5.36
2135 2811 2.928731 GCTACGATCAGATAAGCTGGGC 60.929 54.545 0.00 0.00 44.98 5.36
2136 2812 2.560542 AGCTACGATCAGATAAGCTGGG 59.439 50.000 11.77 0.00 44.98 4.45
2137 2813 3.932545 AGCTACGATCAGATAAGCTGG 57.067 47.619 11.77 0.00 44.98 4.85
2138 2814 4.864633 TGAAGCTACGATCAGATAAGCTG 58.135 43.478 12.84 0.00 42.49 4.24
2139 2815 5.242615 TGATGAAGCTACGATCAGATAAGCT 59.757 40.000 8.09 8.09 45.12 3.74
2140 2816 5.465051 TGATGAAGCTACGATCAGATAAGC 58.535 41.667 0.00 4.40 0.00 3.09
2141 2817 6.676950 ACTGATGAAGCTACGATCAGATAAG 58.323 40.000 25.34 9.58 43.94 1.73
2142 2818 6.641169 ACTGATGAAGCTACGATCAGATAA 57.359 37.500 25.34 0.37 43.94 1.75
2143 2819 6.641169 AACTGATGAAGCTACGATCAGATA 57.359 37.500 25.34 2.94 43.94 1.98
2144 2820 5.528043 AACTGATGAAGCTACGATCAGAT 57.472 39.130 25.34 16.44 43.94 2.90
2145 2821 4.991153 AACTGATGAAGCTACGATCAGA 57.009 40.909 25.34 3.15 43.94 3.27
2146 2822 5.218885 CCTAACTGATGAAGCTACGATCAG 58.781 45.833 20.27 20.27 45.78 2.90
2147 2823 4.038042 CCCTAACTGATGAAGCTACGATCA 59.962 45.833 0.00 0.00 0.00 2.92
2148 2824 4.278669 TCCCTAACTGATGAAGCTACGATC 59.721 45.833 0.00 0.00 0.00 3.69
2149 2825 4.215908 TCCCTAACTGATGAAGCTACGAT 58.784 43.478 0.00 0.00 0.00 3.73
2150 2826 3.628008 TCCCTAACTGATGAAGCTACGA 58.372 45.455 0.00 0.00 0.00 3.43
2151 2827 4.592485 ATCCCTAACTGATGAAGCTACG 57.408 45.455 0.00 0.00 0.00 3.51
2152 2828 9.998106 TTAATTATCCCTAACTGATGAAGCTAC 57.002 33.333 0.00 0.00 0.00 3.58
2154 2830 9.732130 GATTAATTATCCCTAACTGATGAAGCT 57.268 33.333 0.00 0.00 0.00 3.74
2155 2831 9.507329 TGATTAATTATCCCTAACTGATGAAGC 57.493 33.333 0.00 0.00 31.87 3.86
2179 2855 6.017192 CACAACCAGATGTAGTTCAACATTGA 60.017 38.462 0.00 0.00 40.17 2.57
2180 2856 6.144854 CACAACCAGATGTAGTTCAACATTG 58.855 40.000 0.00 0.00 40.17 2.82
2181 2857 5.241506 CCACAACCAGATGTAGTTCAACATT 59.758 40.000 0.00 0.00 40.17 2.71
2183 2859 4.133820 CCACAACCAGATGTAGTTCAACA 58.866 43.478 0.00 0.00 30.84 3.33
2184 2860 4.213482 GTCCACAACCAGATGTAGTTCAAC 59.787 45.833 0.00 0.00 30.84 3.18
2185 2861 4.385825 GTCCACAACCAGATGTAGTTCAA 58.614 43.478 0.00 0.00 30.84 2.69
2186 2862 3.554129 CGTCCACAACCAGATGTAGTTCA 60.554 47.826 0.00 0.00 30.84 3.18
2187 2863 2.993899 CGTCCACAACCAGATGTAGTTC 59.006 50.000 0.00 0.00 30.84 3.01
2188 2864 2.631062 TCGTCCACAACCAGATGTAGTT 59.369 45.455 0.00 0.00 30.84 2.24
2189 2865 2.244695 TCGTCCACAACCAGATGTAGT 58.755 47.619 0.00 0.00 30.84 2.73
2190 2866 3.526931 ATCGTCCACAACCAGATGTAG 57.473 47.619 0.00 0.00 30.84 2.74
2191 2867 3.259625 TCAATCGTCCACAACCAGATGTA 59.740 43.478 0.00 0.00 30.84 2.29
2192 2868 2.038426 TCAATCGTCCACAACCAGATGT 59.962 45.455 0.00 0.00 0.00 3.06
2193 2869 2.698803 TCAATCGTCCACAACCAGATG 58.301 47.619 0.00 0.00 0.00 2.90
2195 2871 2.920724 TTCAATCGTCCACAACCAGA 57.079 45.000 0.00 0.00 0.00 3.86
2196 2872 3.747099 GATTCAATCGTCCACAACCAG 57.253 47.619 0.00 0.00 0.00 4.00
2208 2884 4.556942 TGCCATGTGATTCGATTCAATC 57.443 40.909 11.35 0.00 33.90 2.67
2209 2885 4.987408 TTGCCATGTGATTCGATTCAAT 57.013 36.364 11.35 5.63 0.00 2.57
2210 2886 4.780275 TTTGCCATGTGATTCGATTCAA 57.220 36.364 11.35 3.73 0.00 2.69
2211 2887 4.780275 TTTTGCCATGTGATTCGATTCA 57.220 36.364 5.92 5.92 0.00 2.57
2212 2888 5.005971 CCAATTTTGCCATGTGATTCGATTC 59.994 40.000 0.29 0.29 0.00 2.52
2222 2972 3.496515 CCAAACTCCCAATTTTGCCATGT 60.497 43.478 0.00 0.00 32.34 3.21
2227 2977 2.223947 ACGTCCAAACTCCCAATTTTGC 60.224 45.455 0.00 0.00 32.34 3.68
2242 2992 1.475280 GACATAGTAGTGGCACGTCCA 59.525 52.381 12.71 3.02 44.18 4.02
2251 3001 9.586435 TCAATCAAACACATAGACATAGTAGTG 57.414 33.333 0.00 0.00 0.00 2.74
2275 3025 7.684937 TGACATCACACAACATGATTATTCA 57.315 32.000 0.00 0.00 34.49 2.57
2276 3026 9.577110 AAATGACATCACACAACATGATTATTC 57.423 29.630 0.00 0.00 34.49 1.75
2289 5325 4.984161 CCCAACAGAAAAATGACATCACAC 59.016 41.667 0.00 0.00 0.00 3.82
2291 5327 5.452078 TCCCAACAGAAAAATGACATCAC 57.548 39.130 0.00 0.00 0.00 3.06
2320 5356 3.643792 AGGGATGCAAGTTAGCTAGGTAG 59.356 47.826 1.31 0.00 34.99 3.18
2321 5357 3.654273 AGGGATGCAAGTTAGCTAGGTA 58.346 45.455 0.00 0.00 34.99 3.08
2322 5358 2.482494 AGGGATGCAAGTTAGCTAGGT 58.518 47.619 0.00 0.00 34.99 3.08
2323 5359 3.643792 ACTAGGGATGCAAGTTAGCTAGG 59.356 47.826 0.00 0.00 34.99 3.02
2324 5360 4.946478 ACTAGGGATGCAAGTTAGCTAG 57.054 45.455 0.00 0.00 34.99 3.42
2327 5363 3.181496 GCAAACTAGGGATGCAAGTTAGC 60.181 47.826 10.62 0.00 39.81 3.09
2328 5364 4.009675 TGCAAACTAGGGATGCAAGTTAG 58.990 43.478 14.52 0.00 46.23 2.34
2329 5365 4.027674 TGCAAACTAGGGATGCAAGTTA 57.972 40.909 14.52 0.00 46.23 2.24
2330 5366 2.875296 TGCAAACTAGGGATGCAAGTT 58.125 42.857 14.52 0.00 46.23 2.66
2342 5387 7.169645 GCAGAAGAAAACATGATTTGCAAACTA 59.830 33.333 15.41 6.85 0.00 2.24
2350 5395 6.014840 ACTCCATGCAGAAGAAAACATGATTT 60.015 34.615 0.00 0.00 41.93 2.17
2357 5402 5.886960 ATGTACTCCATGCAGAAGAAAAC 57.113 39.130 0.00 0.00 30.69 2.43
2358 5403 6.711277 ACTATGTACTCCATGCAGAAGAAAA 58.289 36.000 0.00 0.00 34.86 2.29
2380 5563 4.694233 CCAGGCACGCTGCTGACT 62.694 66.667 9.31 0.00 44.28 3.41
2383 5566 1.709147 GATAACCAGGCACGCTGCTG 61.709 60.000 9.31 0.00 44.28 4.41
2384 5567 1.450312 GATAACCAGGCACGCTGCT 60.450 57.895 9.31 0.00 44.28 4.24
2385 5568 1.026718 AAGATAACCAGGCACGCTGC 61.027 55.000 1.92 1.92 44.08 5.25
2386 5569 1.009829 GAAGATAACCAGGCACGCTG 58.990 55.000 0.00 0.00 0.00 5.18
2389 5572 2.803492 GCTAGGAAGATAACCAGGCACG 60.803 54.545 0.00 0.00 0.00 5.34
2393 5576 3.898123 TGCTAGCTAGGAAGATAACCAGG 59.102 47.826 22.10 0.00 0.00 4.45
2394 5577 5.537300 TTGCTAGCTAGGAAGATAACCAG 57.463 43.478 22.32 0.00 0.00 4.00
2410 5598 5.895928 TGTAGATGTCTGTTAGCTTGCTAG 58.104 41.667 0.00 0.00 0.00 3.42
2412 5600 4.753233 CTGTAGATGTCTGTTAGCTTGCT 58.247 43.478 0.00 0.00 0.00 3.91
2413 5601 3.308323 GCTGTAGATGTCTGTTAGCTTGC 59.692 47.826 0.00 0.00 0.00 4.01
2414 5602 3.868077 GGCTGTAGATGTCTGTTAGCTTG 59.132 47.826 0.00 0.00 32.18 4.01
2415 5603 3.429547 CGGCTGTAGATGTCTGTTAGCTT 60.430 47.826 0.00 0.00 32.18 3.74
2416 5604 2.099921 CGGCTGTAGATGTCTGTTAGCT 59.900 50.000 0.00 0.00 32.18 3.32
2417 5605 2.099263 TCGGCTGTAGATGTCTGTTAGC 59.901 50.000 0.00 0.00 0.00 3.09
2418 5606 3.378742 ACTCGGCTGTAGATGTCTGTTAG 59.621 47.826 0.00 0.00 0.00 2.34
2419 5607 3.353557 ACTCGGCTGTAGATGTCTGTTA 58.646 45.455 0.00 0.00 0.00 2.41
2420 5608 2.164624 GACTCGGCTGTAGATGTCTGTT 59.835 50.000 0.00 0.00 0.00 3.16
2421 5609 1.746220 GACTCGGCTGTAGATGTCTGT 59.254 52.381 0.00 0.00 0.00 3.41
2422 5610 1.268285 CGACTCGGCTGTAGATGTCTG 60.268 57.143 0.00 0.00 0.00 3.51
2423 5611 1.018148 CGACTCGGCTGTAGATGTCT 58.982 55.000 0.00 0.00 0.00 3.41
2425 5613 0.733729 GACGACTCGGCTGTAGATGT 59.266 55.000 2.98 0.00 0.00 3.06
2426 5614 1.018148 AGACGACTCGGCTGTAGATG 58.982 55.000 5.85 0.00 46.62 2.90
2427 5615 3.480342 AGACGACTCGGCTGTAGAT 57.520 52.632 5.85 0.00 46.62 1.98
2434 5622 1.737008 GGGTTTGAGACGACTCGGC 60.737 63.158 10.23 0.00 45.25 5.54
2435 5623 0.317479 AAGGGTTTGAGACGACTCGG 59.683 55.000 10.23 0.00 45.25 4.63
2436 5624 1.269998 AGAAGGGTTTGAGACGACTCG 59.730 52.381 10.23 0.00 45.25 4.18
2437 5625 2.296471 TGAGAAGGGTTTGAGACGACTC 59.704 50.000 8.00 8.00 42.88 3.36
2439 5627 2.814280 TGAGAAGGGTTTGAGACGAC 57.186 50.000 0.00 0.00 0.00 4.34
2440 5628 3.463944 GTTTGAGAAGGGTTTGAGACGA 58.536 45.455 0.00 0.00 0.00 4.20
2441 5629 2.221055 CGTTTGAGAAGGGTTTGAGACG 59.779 50.000 0.00 0.00 0.00 4.18
2443 5631 3.463944 GACGTTTGAGAAGGGTTTGAGA 58.536 45.455 0.00 0.00 0.00 3.27
2445 5633 2.567985 GGACGTTTGAGAAGGGTTTGA 58.432 47.619 0.00 0.00 0.00 2.69
2448 5636 0.250166 CCGGACGTTTGAGAAGGGTT 60.250 55.000 0.00 0.00 0.00 4.11
2449 5637 1.370064 CCGGACGTTTGAGAAGGGT 59.630 57.895 0.00 0.00 0.00 4.34
2450 5638 2.033194 GCCGGACGTTTGAGAAGGG 61.033 63.158 5.05 0.00 0.00 3.95
2451 5639 2.033194 GGCCGGACGTTTGAGAAGG 61.033 63.158 5.05 0.00 0.00 3.46
2452 5640 1.291877 CTGGCCGGACGTTTGAGAAG 61.292 60.000 5.28 0.00 0.00 2.85
2455 5643 3.423154 GCTGGCCGGACGTTTGAG 61.423 66.667 18.31 0.00 0.00 3.02
2468 5656 3.402681 AGTGATCGGGTGGGCTGG 61.403 66.667 0.00 0.00 0.00 4.85
2469 5657 1.976132 ATCAGTGATCGGGTGGGCTG 61.976 60.000 0.00 0.00 0.00 4.85
2470 5658 1.690219 GATCAGTGATCGGGTGGGCT 61.690 60.000 17.11 0.00 29.12 5.19
2471 5659 1.227674 GATCAGTGATCGGGTGGGC 60.228 63.158 17.11 0.00 29.12 5.36
2479 5667 1.132453 TCACGTGACCGATCAGTGATC 59.868 52.381 21.22 21.22 37.72 2.92
2480 5668 1.135373 GTCACGTGACCGATCAGTGAT 60.135 52.381 33.62 4.98 41.17 3.06
2481 5669 0.240145 GTCACGTGACCGATCAGTGA 59.760 55.000 33.62 7.68 39.04 3.41
2482 5670 2.725644 GTCACGTGACCGATCAGTG 58.274 57.895 33.62 3.69 39.07 3.66
2501 5689 1.247419 TGTTTAATGCACCCGCCTGG 61.247 55.000 0.00 0.00 37.32 4.45
2502 5690 0.171007 CTGTTTAATGCACCCGCCTG 59.829 55.000 0.00 0.00 37.32 4.85
2503 5691 0.965363 CCTGTTTAATGCACCCGCCT 60.965 55.000 0.00 0.00 37.32 5.52
2504 5692 1.510844 CCTGTTTAATGCACCCGCC 59.489 57.895 0.00 0.00 37.32 6.13
2505 5693 1.153842 GCCTGTTTAATGCACCCGC 60.154 57.895 0.00 0.00 39.24 6.13
2506 5694 0.965363 AGGCCTGTTTAATGCACCCG 60.965 55.000 3.11 0.00 0.00 5.28
2507 5695 0.817654 GAGGCCTGTTTAATGCACCC 59.182 55.000 12.00 0.00 0.00 4.61
2508 5696 1.544724 TGAGGCCTGTTTAATGCACC 58.455 50.000 12.00 0.00 0.00 5.01
2509 5697 3.317150 GTTTGAGGCCTGTTTAATGCAC 58.683 45.455 12.00 0.00 0.00 4.57
2510 5698 2.030363 CGTTTGAGGCCTGTTTAATGCA 60.030 45.455 12.00 0.00 0.00 3.96
2511 5699 2.030274 ACGTTTGAGGCCTGTTTAATGC 60.030 45.455 12.00 0.00 0.00 3.56
2512 5700 3.365969 GGACGTTTGAGGCCTGTTTAATG 60.366 47.826 12.00 6.70 0.00 1.90
2513 5701 2.817844 GGACGTTTGAGGCCTGTTTAAT 59.182 45.455 12.00 0.00 0.00 1.40
2514 5702 2.223745 GGACGTTTGAGGCCTGTTTAA 58.776 47.619 12.00 0.00 0.00 1.52
2515 5703 1.874739 CGGACGTTTGAGGCCTGTTTA 60.875 52.381 12.00 0.00 0.00 2.01
2516 5704 1.164041 CGGACGTTTGAGGCCTGTTT 61.164 55.000 12.00 0.00 0.00 2.83
2517 5705 1.597027 CGGACGTTTGAGGCCTGTT 60.597 57.895 12.00 0.00 0.00 3.16
2518 5706 2.030562 CGGACGTTTGAGGCCTGT 59.969 61.111 12.00 0.00 0.00 4.00
2519 5707 2.742372 CCGGACGTTTGAGGCCTG 60.742 66.667 12.00 0.00 0.00 4.85
2520 5708 2.920912 TCCGGACGTTTGAGGCCT 60.921 61.111 3.86 3.86 0.00 5.19
2521 5709 2.741211 GTCCGGACGTTTGAGGCC 60.741 66.667 20.85 0.00 0.00 5.19
2522 5710 2.027625 CAGTCCGGACGTTTGAGGC 61.028 63.158 28.26 1.46 36.20 4.70
2523 5711 0.666577 GTCAGTCCGGACGTTTGAGG 60.667 60.000 28.26 12.91 36.20 3.86
2524 5712 0.666577 GGTCAGTCCGGACGTTTGAG 60.667 60.000 28.26 14.85 38.70 3.02
2525 5713 1.364901 GGTCAGTCCGGACGTTTGA 59.635 57.895 28.26 22.86 38.70 2.69
2526 5714 3.946907 GGTCAGTCCGGACGTTTG 58.053 61.111 28.26 20.94 38.70 2.93
2535 5723 2.048127 GAGTGTGCCGGTCAGTCC 60.048 66.667 19.03 7.40 31.38 3.85
2536 5724 0.530744 TATGAGTGTGCCGGTCAGTC 59.469 55.000 21.37 21.37 36.24 3.51
2537 5725 1.137086 GATATGAGTGTGCCGGTCAGT 59.863 52.381 1.90 6.04 0.00 3.41
2538 5726 1.539065 GGATATGAGTGTGCCGGTCAG 60.539 57.143 1.90 0.00 0.00 3.51
2539 5727 0.464036 GGATATGAGTGTGCCGGTCA 59.536 55.000 1.90 0.00 0.00 4.02
2540 5728 0.464036 TGGATATGAGTGTGCCGGTC 59.536 55.000 1.90 0.00 0.00 4.79
2541 5729 0.465705 CTGGATATGAGTGTGCCGGT 59.534 55.000 1.90 0.00 0.00 5.28
2542 5730 0.882042 GCTGGATATGAGTGTGCCGG 60.882 60.000 0.00 0.00 0.00 6.13
2543 5731 0.882042 GGCTGGATATGAGTGTGCCG 60.882 60.000 0.00 0.00 0.00 5.69
2544 5732 0.536006 GGGCTGGATATGAGTGTGCC 60.536 60.000 0.00 0.00 38.28 5.01
2545 5733 0.181114 TGGGCTGGATATGAGTGTGC 59.819 55.000 0.00 0.00 0.00 4.57
2546 5734 2.715749 TTGGGCTGGATATGAGTGTG 57.284 50.000 0.00 0.00 0.00 3.82
2547 5735 3.959495 ATTTGGGCTGGATATGAGTGT 57.041 42.857 0.00 0.00 0.00 3.55
2548 5736 5.563592 TCATATTTGGGCTGGATATGAGTG 58.436 41.667 10.80 0.00 37.67 3.51
2549 5737 5.813383 CTCATATTTGGGCTGGATATGAGT 58.187 41.667 22.19 0.00 46.22 3.41
2551 5739 4.568380 GCCTCATATTTGGGCTGGATATGA 60.568 45.833 12.87 12.87 42.31 2.15
2552 5740 3.698040 GCCTCATATTTGGGCTGGATATG 59.302 47.826 7.92 7.65 42.31 1.78
2553 5741 3.334581 TGCCTCATATTTGGGCTGGATAT 59.665 43.478 13.73 0.00 45.45 1.63
2554 5742 2.715880 TGCCTCATATTTGGGCTGGATA 59.284 45.455 13.73 0.00 45.45 2.59
2555 5743 1.500303 TGCCTCATATTTGGGCTGGAT 59.500 47.619 13.73 0.00 45.45 3.41
2556 5744 0.925558 TGCCTCATATTTGGGCTGGA 59.074 50.000 13.73 0.00 45.45 3.86
2557 5745 1.133699 TCTGCCTCATATTTGGGCTGG 60.134 52.381 16.05 10.19 45.45 4.85
2558 5746 2.353357 TCTGCCTCATATTTGGGCTG 57.647 50.000 13.73 13.13 45.45 4.85
2559 5747 3.557898 CGTATCTGCCTCATATTTGGGCT 60.558 47.826 13.73 1.44 45.45 5.19
2560 5748 2.744202 CGTATCTGCCTCATATTTGGGC 59.256 50.000 8.15 8.15 45.45 5.36
2561 5749 3.748048 CACGTATCTGCCTCATATTTGGG 59.252 47.826 0.00 0.00 0.00 4.12
2562 5750 3.748048 CCACGTATCTGCCTCATATTTGG 59.252 47.826 0.00 0.00 0.00 3.28
2563 5751 3.748048 CCCACGTATCTGCCTCATATTTG 59.252 47.826 0.00 0.00 0.00 2.32
2564 5752 3.807209 GCCCACGTATCTGCCTCATATTT 60.807 47.826 0.00 0.00 0.00 1.40
2565 5753 2.289694 GCCCACGTATCTGCCTCATATT 60.290 50.000 0.00 0.00 0.00 1.28
2566 5754 1.276421 GCCCACGTATCTGCCTCATAT 59.724 52.381 0.00 0.00 0.00 1.78
2567 5755 0.679505 GCCCACGTATCTGCCTCATA 59.320 55.000 0.00 0.00 0.00 2.15
2568 5756 1.337384 TGCCCACGTATCTGCCTCAT 61.337 55.000 0.00 0.00 0.00 2.90
2569 5757 1.987306 TGCCCACGTATCTGCCTCA 60.987 57.895 0.00 0.00 0.00 3.86
2570 5758 1.521681 GTGCCCACGTATCTGCCTC 60.522 63.158 0.00 0.00 0.00 4.70
2571 5759 1.961180 GAGTGCCCACGTATCTGCCT 61.961 60.000 0.00 0.00 36.20 4.75
2572 5760 1.521681 GAGTGCCCACGTATCTGCC 60.522 63.158 0.00 0.00 36.20 4.85
2573 5761 1.878522 CGAGTGCCCACGTATCTGC 60.879 63.158 0.00 0.00 36.20 4.26
2574 5762 1.226974 CCGAGTGCCCACGTATCTG 60.227 63.158 0.00 0.00 36.20 2.90
2575 5763 2.423898 CCCGAGTGCCCACGTATCT 61.424 63.158 0.00 0.00 36.20 1.98
2576 5764 2.106332 CCCGAGTGCCCACGTATC 59.894 66.667 0.00 0.00 36.20 2.24
2577 5765 4.157120 GCCCGAGTGCCCACGTAT 62.157 66.667 0.00 0.00 36.20 3.06
2596 5784 4.175489 AGATCGACGTGACGGGCG 62.175 66.667 10.66 12.98 0.00 6.13
2597 5785 2.579787 CAGATCGACGTGACGGGC 60.580 66.667 10.66 0.00 0.00 6.13
2598 5786 2.102357 CCAGATCGACGTGACGGG 59.898 66.667 10.66 0.23 0.00 5.28
2599 5787 2.579787 GCCAGATCGACGTGACGG 60.580 66.667 10.66 0.00 0.00 4.79
2600 5788 2.579787 GGCCAGATCGACGTGACG 60.580 66.667 2.24 2.24 0.00 4.35
2601 5789 2.202756 GGGCCAGATCGACGTGAC 60.203 66.667 4.39 0.00 0.00 3.67
2602 5790 3.822192 CGGGCCAGATCGACGTGA 61.822 66.667 4.39 0.00 0.00 4.35
2605 5793 4.812476 TTGCGGGCCAGATCGACG 62.812 66.667 7.23 0.00 0.00 5.12
2606 5794 2.203070 ATTGCGGGCCAGATCGAC 60.203 61.111 7.23 0.00 0.00 4.20
2607 5795 2.203056 CATTGCGGGCCAGATCGA 60.203 61.111 7.23 0.00 0.00 3.59
2608 5796 2.203056 TCATTGCGGGCCAGATCG 60.203 61.111 7.23 0.00 0.00 3.69
2609 5797 2.189499 GGTCATTGCGGGCCAGATC 61.189 63.158 7.23 0.00 0.00 2.75
2610 5798 2.124151 GGTCATTGCGGGCCAGAT 60.124 61.111 7.23 0.00 0.00 2.90
2611 5799 4.424711 GGGTCATTGCGGGCCAGA 62.425 66.667 7.23 0.00 0.00 3.86
2615 5803 4.740822 AGTGGGGTCATTGCGGGC 62.741 66.667 0.00 0.00 0.00 6.13
2616 5804 2.438434 GAGTGGGGTCATTGCGGG 60.438 66.667 0.00 0.00 0.00 6.13
2617 5805 2.438434 GGAGTGGGGTCATTGCGG 60.438 66.667 0.00 0.00 0.00 5.69
2618 5806 1.746615 CTGGAGTGGGGTCATTGCG 60.747 63.158 0.00 0.00 0.00 4.85
2619 5807 2.048603 GCTGGAGTGGGGTCATTGC 61.049 63.158 0.00 0.00 0.00 3.56
2620 5808 1.379044 GGCTGGAGTGGGGTCATTG 60.379 63.158 0.00 0.00 0.00 2.82
2621 5809 2.616458 GGGCTGGAGTGGGGTCATT 61.616 63.158 0.00 0.00 0.00 2.57
2622 5810 3.017581 GGGCTGGAGTGGGGTCAT 61.018 66.667 0.00 0.00 0.00 3.06
2628 5816 2.445492 ATTTGTGGGGGCTGGAGTGG 62.445 60.000 0.00 0.00 0.00 4.00
2629 5817 0.331278 TATTTGTGGGGGCTGGAGTG 59.669 55.000 0.00 0.00 0.00 3.51
2630 5818 1.308877 ATATTTGTGGGGGCTGGAGT 58.691 50.000 0.00 0.00 0.00 3.85
2631 5819 3.074390 TCATATATTTGTGGGGGCTGGAG 59.926 47.826 0.00 0.00 0.00 3.86
2632 5820 3.059853 TCATATATTTGTGGGGGCTGGA 58.940 45.455 0.00 0.00 0.00 3.86
2633 5821 3.157087 GTCATATATTTGTGGGGGCTGG 58.843 50.000 0.00 0.00 0.00 4.85
2634 5822 3.831323 TGTCATATATTTGTGGGGGCTG 58.169 45.455 0.00 0.00 0.00 4.85
2635 5823 4.079212 AGTTGTCATATATTTGTGGGGGCT 60.079 41.667 0.00 0.00 0.00 5.19
2636 5824 4.037923 CAGTTGTCATATATTTGTGGGGGC 59.962 45.833 0.00 0.00 0.00 5.80
2637 5825 5.445069 TCAGTTGTCATATATTTGTGGGGG 58.555 41.667 0.00 0.00 0.00 5.40
2638 5826 6.772233 TCATCAGTTGTCATATATTTGTGGGG 59.228 38.462 0.00 0.00 0.00 4.96
2639 5827 7.521099 GCTCATCAGTTGTCATATATTTGTGGG 60.521 40.741 0.00 0.00 0.00 4.61
2640 5828 7.012610 TGCTCATCAGTTGTCATATATTTGTGG 59.987 37.037 0.00 0.00 0.00 4.17
2641 5829 7.922837 TGCTCATCAGTTGTCATATATTTGTG 58.077 34.615 0.00 0.00 0.00 3.33
2642 5830 8.510243 TTGCTCATCAGTTGTCATATATTTGT 57.490 30.769 0.00 0.00 0.00 2.83
2643 5831 9.229784 GTTTGCTCATCAGTTGTCATATATTTG 57.770 33.333 0.00 0.00 0.00 2.32
2644 5832 8.408601 GGTTTGCTCATCAGTTGTCATATATTT 58.591 33.333 0.00 0.00 0.00 1.40
2645 5833 7.776969 AGGTTTGCTCATCAGTTGTCATATATT 59.223 33.333 0.00 0.00 0.00 1.28
2646 5834 7.285566 AGGTTTGCTCATCAGTTGTCATATAT 58.714 34.615 0.00 0.00 0.00 0.86
2647 5835 6.653020 AGGTTTGCTCATCAGTTGTCATATA 58.347 36.000 0.00 0.00 0.00 0.86
2648 5836 5.503927 AGGTTTGCTCATCAGTTGTCATAT 58.496 37.500 0.00 0.00 0.00 1.78
2649 5837 4.910195 AGGTTTGCTCATCAGTTGTCATA 58.090 39.130 0.00 0.00 0.00 2.15
2650 5838 3.759581 AGGTTTGCTCATCAGTTGTCAT 58.240 40.909 0.00 0.00 0.00 3.06
2651 5839 3.213206 AGGTTTGCTCATCAGTTGTCA 57.787 42.857 0.00 0.00 0.00 3.58
2652 5840 4.757149 ACTAAGGTTTGCTCATCAGTTGTC 59.243 41.667 0.00 0.00 0.00 3.18
2653 5841 4.718961 ACTAAGGTTTGCTCATCAGTTGT 58.281 39.130 0.00 0.00 0.00 3.32
2654 5842 4.756642 TGACTAAGGTTTGCTCATCAGTTG 59.243 41.667 0.00 0.00 0.00 3.16
2655 5843 4.973168 TGACTAAGGTTTGCTCATCAGTT 58.027 39.130 0.00 0.00 0.00 3.16
2656 5844 4.623932 TGACTAAGGTTTGCTCATCAGT 57.376 40.909 0.00 0.00 0.00 3.41
2657 5845 5.879223 AGATTGACTAAGGTTTGCTCATCAG 59.121 40.000 0.00 0.00 0.00 2.90
2658 5846 5.809001 AGATTGACTAAGGTTTGCTCATCA 58.191 37.500 0.00 0.00 0.00 3.07
2659 5847 5.877012 TGAGATTGACTAAGGTTTGCTCATC 59.123 40.000 0.00 0.00 0.00 2.92
2660 5848 5.809001 TGAGATTGACTAAGGTTTGCTCAT 58.191 37.500 0.00 0.00 0.00 2.90
2661 5849 5.221722 ACTGAGATTGACTAAGGTTTGCTCA 60.222 40.000 0.00 0.00 31.44 4.26
2662 5850 5.241662 ACTGAGATTGACTAAGGTTTGCTC 58.758 41.667 0.00 0.00 31.44 4.26
2663 5851 5.234466 ACTGAGATTGACTAAGGTTTGCT 57.766 39.130 0.00 0.00 31.44 3.91
2664 5852 4.393371 GGACTGAGATTGACTAAGGTTTGC 59.607 45.833 0.00 0.00 31.44 3.68
2665 5853 4.627467 CGGACTGAGATTGACTAAGGTTTG 59.373 45.833 0.00 0.00 31.44 2.93
2666 5854 4.283722 ACGGACTGAGATTGACTAAGGTTT 59.716 41.667 0.00 0.00 31.44 3.27
2667 5855 3.833070 ACGGACTGAGATTGACTAAGGTT 59.167 43.478 0.00 0.00 31.44 3.50
2668 5856 3.432378 ACGGACTGAGATTGACTAAGGT 58.568 45.455 0.00 0.00 31.44 3.50
2674 5862 3.440872 AGTGAGTACGGACTGAGATTGAC 59.559 47.826 4.10 0.00 35.45 3.18
2678 5866 2.093606 TCGAGTGAGTACGGACTGAGAT 60.094 50.000 4.10 0.00 35.45 2.75
2685 5873 0.612229 AGAGGTCGAGTGAGTACGGA 59.388 55.000 0.00 0.00 0.00 4.69
2690 5878 0.402504 AGTGGAGAGGTCGAGTGAGT 59.597 55.000 0.00 0.00 0.00 3.41
2691 5879 1.470890 GAAGTGGAGAGGTCGAGTGAG 59.529 57.143 0.00 0.00 0.00 3.51
2694 5882 1.614850 GGAGAAGTGGAGAGGTCGAGT 60.615 57.143 0.00 0.00 0.00 4.18
2695 5883 1.099689 GGAGAAGTGGAGAGGTCGAG 58.900 60.000 0.00 0.00 0.00 4.04
2696 5884 0.323542 GGGAGAAGTGGAGAGGTCGA 60.324 60.000 0.00 0.00 0.00 4.20
2698 5886 0.978667 GGGGGAGAAGTGGAGAGGTC 60.979 65.000 0.00 0.00 0.00 3.85
2699 5887 1.081277 GGGGGAGAAGTGGAGAGGT 59.919 63.158 0.00 0.00 0.00 3.85
2701 5889 1.362224 TTTGGGGGAGAAGTGGAGAG 58.638 55.000 0.00 0.00 0.00 3.20
2703 5891 1.064389 GGATTTGGGGGAGAAGTGGAG 60.064 57.143 0.00 0.00 0.00 3.86
2707 5895 1.760405 AGTGGATTTGGGGGAGAAGT 58.240 50.000 0.00 0.00 0.00 3.01
2708 5896 2.728007 GAAGTGGATTTGGGGGAGAAG 58.272 52.381 0.00 0.00 0.00 2.85
2711 5899 0.328258 ACGAAGTGGATTTGGGGGAG 59.672 55.000 0.00 0.00 42.51 4.30
2736 5924 4.100084 TCAGACATGGCAGGCGGG 62.100 66.667 0.00 0.00 0.00 6.13
2737 5925 2.821366 GTCAGACATGGCAGGCGG 60.821 66.667 0.00 0.00 0.00 6.13
2744 5932 3.931468 GTCAGATTCACTGTCAGACATGG 59.069 47.826 6.91 0.00 45.86 3.66
2746 5934 4.879197 TGTCAGATTCACTGTCAGACAT 57.121 40.909 6.91 0.00 45.86 3.06
2749 5937 4.142381 CGGTATGTCAGATTCACTGTCAGA 60.142 45.833 6.91 0.00 44.64 3.27
2752 5940 3.130516 TCCGGTATGTCAGATTCACTGTC 59.869 47.826 0.00 0.00 45.86 3.51
2753 5941 3.096852 TCCGGTATGTCAGATTCACTGT 58.903 45.455 0.00 0.00 45.86 3.55
2754 5942 3.801114 TCCGGTATGTCAGATTCACTG 57.199 47.619 0.00 0.00 46.97 3.66
2758 5946 2.808543 GCCATTCCGGTATGTCAGATTC 59.191 50.000 18.49 0.00 36.97 2.52
2759 5947 2.439507 AGCCATTCCGGTATGTCAGATT 59.560 45.455 18.49 0.00 36.97 2.40
2761 5949 1.412710 GAGCCATTCCGGTATGTCAGA 59.587 52.381 18.49 0.00 36.97 3.27
2762 5950 1.138859 TGAGCCATTCCGGTATGTCAG 59.861 52.381 18.49 5.97 36.97 3.51
2764 5952 2.213499 CTTGAGCCATTCCGGTATGTC 58.787 52.381 18.49 11.48 36.97 3.06
2765 5953 1.134098 CCTTGAGCCATTCCGGTATGT 60.134 52.381 18.49 2.25 36.97 2.29
2768 5956 1.223487 GCCTTGAGCCATTCCGGTA 59.777 57.895 0.00 0.00 36.97 4.02
2791 5979 2.031163 CGAGCCATCGGAATCCCC 59.969 66.667 0.00 0.00 45.39 4.81
2801 5989 4.129737 CGGGTGTCGACGAGCCAT 62.130 66.667 25.32 0.00 42.43 4.40
2809 5997 1.077930 CCTCCTAGTCGGGTGTCGA 60.078 63.158 0.00 0.00 46.77 4.20
2810 5998 1.077930 TCCTCCTAGTCGGGTGTCG 60.078 63.158 0.00 0.00 40.90 4.35
2812 6000 1.380112 GCTCCTCCTAGTCGGGTGT 60.380 63.158 0.00 0.00 0.00 4.16
2814 6002 0.475044 CTAGCTCCTCCTAGTCGGGT 59.525 60.000 0.00 0.00 32.09 5.28
2815 6003 0.891904 GCTAGCTCCTCCTAGTCGGG 60.892 65.000 7.70 0.00 37.66 5.14
2816 6004 1.231958 CGCTAGCTCCTCCTAGTCGG 61.232 65.000 13.93 0.00 37.66 4.79
2817 6005 1.847890 GCGCTAGCTCCTCCTAGTCG 61.848 65.000 13.93 0.00 41.01 4.18
2836 6024 2.825836 GTGGAGGGCAATGCGGAG 60.826 66.667 0.00 0.00 0.00 4.63
2837 6025 4.424711 GGTGGAGGGCAATGCGGA 62.425 66.667 0.00 0.00 0.00 5.54
2839 6027 4.776322 TCGGTGGAGGGCAATGCG 62.776 66.667 0.00 0.00 0.00 4.73
2840 6028 2.124151 ATCGGTGGAGGGCAATGC 60.124 61.111 0.00 0.00 0.00 3.56
2841 6029 1.097547 GTGATCGGTGGAGGGCAATG 61.098 60.000 0.00 0.00 0.00 2.82
2842 6030 1.224592 GTGATCGGTGGAGGGCAAT 59.775 57.895 0.00 0.00 0.00 3.56
2843 6031 1.918293 AGTGATCGGTGGAGGGCAA 60.918 57.895 0.00 0.00 0.00 4.52
2846 6034 2.187946 GCAGTGATCGGTGGAGGG 59.812 66.667 0.00 0.00 0.00 4.30
2847 6035 1.153489 CAGCAGTGATCGGTGGAGG 60.153 63.158 0.00 0.00 0.00 4.30
2848 6036 4.509756 CAGCAGTGATCGGTGGAG 57.490 61.111 0.00 0.00 0.00 3.86
2851 6039 2.983433 GATCCAGCAGTGATCGGTG 58.017 57.895 0.00 0.00 30.23 4.94
2855 6043 1.070445 CCCCGATCCAGCAGTGATC 59.930 63.158 0.00 0.00 36.18 2.92
2856 6044 3.112205 GCCCCGATCCAGCAGTGAT 62.112 63.158 0.00 0.00 0.00 3.06
2857 6045 3.785859 GCCCCGATCCAGCAGTGA 61.786 66.667 0.00 0.00 0.00 3.41
2864 6052 4.122149 ATTTGCCGCCCCGATCCA 62.122 61.111 0.00 0.00 0.00 3.41
2865 6053 3.287520 GATTTGCCGCCCCGATCC 61.288 66.667 0.00 0.00 0.00 3.36
2866 6054 3.287520 GGATTTGCCGCCCCGATC 61.288 66.667 0.00 0.00 0.00 3.69
2868 6056 4.483243 GAGGATTTGCCGCCCCGA 62.483 66.667 0.00 0.00 43.43 5.14
2870 6058 2.043953 AAGAGGATTTGCCGCCCC 60.044 61.111 0.00 0.00 43.43 5.80
2873 6061 2.472909 CCGGAAGAGGATTTGCCGC 61.473 63.158 0.00 0.00 43.43 6.53
2874 6062 3.813596 CCGGAAGAGGATTTGCCG 58.186 61.111 0.00 0.00 43.43 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.