Multiple sequence alignment - TraesCS3B01G484900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G484900 chr3B 100.000 3480 0 0 1 3480 731192435 731195914 0.000000e+00 6427.0
1 TraesCS3B01G484900 chr3B 98.901 2822 26 3 441 3257 731134820 731137641 0.000000e+00 5035.0
2 TraesCS3B01G484900 chr3B 81.939 1279 200 23 1162 2423 754621214 754622478 0.000000e+00 1053.0
3 TraesCS3B01G484900 chr3B 90.278 72 7 0 3186 3257 723489012 723488941 1.030000e-15 95.3
4 TraesCS3B01G484900 chr3A 91.628 1947 130 20 1017 2947 688596513 688598442 0.000000e+00 2662.0
5 TraesCS3B01G484900 chr3A 81.214 1219 195 22 1162 2360 701223117 701221913 0.000000e+00 952.0
6 TraesCS3B01G484900 chr3A 87.278 676 37 14 323 961 688595550 688596213 0.000000e+00 726.0
7 TraesCS3B01G484900 chr3A 100.000 37 0 0 965 1001 688596477 688596513 6.230000e-08 69.4
8 TraesCS3B01G484900 chr3A 97.222 36 1 0 1091 1126 701223170 701223135 1.040000e-05 62.1
9 TraesCS3B01G484900 chr3D 90.046 1537 80 33 351 1862 551370426 551371914 0.000000e+00 1923.0
10 TraesCS3B01G484900 chr3D 92.869 1164 60 9 1401 2545 551400251 551399092 0.000000e+00 1668.0
11 TraesCS3B01G484900 chr3D 85.952 1260 61 35 323 1538 551428406 551427219 0.000000e+00 1240.0
12 TraesCS3B01G484900 chr3D 81.170 1333 212 26 1091 2408 566075398 566076706 0.000000e+00 1035.0
13 TraesCS3B01G484900 chr3D 92.132 699 50 3 1850 2546 551386001 551386696 0.000000e+00 981.0
14 TraesCS3B01G484900 chr3D 87.047 911 45 30 538 1404 551403689 551402808 0.000000e+00 961.0
15 TraesCS3B01G484900 chr3D 79.767 1290 224 31 1091 2371 566001354 566002615 0.000000e+00 902.0
16 TraesCS3B01G484900 chr3D 86.786 280 32 5 2681 2956 551386697 551386975 1.210000e-79 307.0
17 TraesCS3B01G484900 chr3D 94.271 192 10 1 316 507 551403878 551403688 3.400000e-75 292.0
18 TraesCS3B01G484900 chr3D 88.211 246 24 5 2715 2956 551399075 551398831 4.390000e-74 289.0
19 TraesCS3B01G484900 chr3D 86.391 169 21 2 3027 3195 516859780 516859614 2.130000e-42 183.0
20 TraesCS3B01G484900 chr3D 96.970 33 1 0 1684 1716 570559796 570559828 4.850000e-04 56.5
21 TraesCS3B01G484900 chr7B 97.222 324 9 0 1 324 372838535 372838858 1.830000e-152 549.0
22 TraesCS3B01G484900 chr7B 95.988 324 13 0 1 324 272103660 272103337 8.560000e-146 527.0
23 TraesCS3B01G484900 chr7B 99.107 224 2 0 3257 3480 21204403 21204626 1.500000e-108 403.0
24 TraesCS3B01G484900 chr7B 99.103 223 2 0 3258 3480 60387786 60387564 5.410000e-108 401.0
25 TraesCS3B01G484900 chr7B 99.103 223 2 0 3258 3480 713740295 713740073 5.410000e-108 401.0
26 TraesCS3B01G484900 chr7B 98.246 228 4 0 3253 3480 568037950 568037723 1.950000e-107 399.0
27 TraesCS3B01G484900 chr7B 97.826 230 3 2 3251 3480 678366255 678366482 2.520000e-106 396.0
28 TraesCS3B01G484900 chr7B 96.875 32 1 0 2680 2711 139100541 139100510 2.000000e-03 54.7
29 TraesCS3B01G484900 chr1B 98.690 229 2 1 3253 3480 588339730 588339958 4.180000e-109 405.0
30 TraesCS3B01G484900 chr1B 98.667 225 3 0 3256 3480 669272616 669272392 1.950000e-107 399.0
31 TraesCS3B01G484900 chrUn 99.103 223 2 0 3258 3480 65419421 65419199 5.410000e-108 401.0
32 TraesCS3B01G484900 chr5B 98.673 226 3 0 3255 3480 540516814 540517039 5.410000e-108 401.0
33 TraesCS3B01G484900 chr5B 83.838 297 48 0 9 305 676511688 676511984 2.040000e-72 283.0
34 TraesCS3B01G484900 chr4A 85.762 302 43 0 4 305 635240730 635241031 1.560000e-83 320.0
35 TraesCS3B01G484900 chr4A 87.097 155 20 0 3034 3188 743976878 743976724 3.570000e-40 176.0
36 TraesCS3B01G484900 chr4A 97.368 38 1 0 256 293 90426817 90426854 8.060000e-07 65.8
37 TraesCS3B01G484900 chr4A 97.368 38 1 0 256 293 679688883 679688846 8.060000e-07 65.8
38 TraesCS3B01G484900 chr4B 90.123 162 16 0 3026 3187 579446686 579446525 9.790000e-51 211.0
39 TraesCS3B01G484900 chr6D 87.425 167 16 4 3031 3195 24021702 24021539 1.650000e-43 187.0
40 TraesCS3B01G484900 chr6D 89.333 75 7 1 3184 3257 462396846 462396772 3.700000e-15 93.5
41 TraesCS3B01G484900 chr7A 87.742 155 19 0 3031 3185 136285149 136285303 7.670000e-42 182.0
42 TraesCS3B01G484900 chr7A 86.250 160 22 0 3025 3184 493654480 493654639 1.280000e-39 174.0
43 TraesCS3B01G484900 chr4D 86.747 166 19 3 3031 3195 351532999 351533162 7.670000e-42 182.0
44 TraesCS3B01G484900 chr2D 85.976 164 19 4 3027 3188 22178706 22178545 4.620000e-39 172.0
45 TraesCS3B01G484900 chr2D 91.667 72 6 0 3186 3257 589880282 589880353 2.210000e-17 100.0
46 TraesCS3B01G484900 chr6B 91.549 71 6 0 3187 3257 692816312 692816242 7.950000e-17 99.0
47 TraesCS3B01G484900 chr6B 90.278 72 7 0 3187 3258 200774969 200775040 1.030000e-15 95.3
48 TraesCS3B01G484900 chr6A 91.549 71 6 0 3187 3257 606823735 606823665 7.950000e-17 99.0
49 TraesCS3B01G484900 chr2B 91.549 71 6 0 3187 3257 711445552 711445622 7.950000e-17 99.0
50 TraesCS3B01G484900 chr1A 90.278 72 7 0 3186 3257 415633453 415633382 1.030000e-15 95.3
51 TraesCS3B01G484900 chr1A 97.368 38 1 0 256 293 320293397 320293360 8.060000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G484900 chr3B 731192435 731195914 3479 False 6427.000000 6427 100.000000 1 3480 1 chr3B.!!$F2 3479
1 TraesCS3B01G484900 chr3B 731134820 731137641 2821 False 5035.000000 5035 98.901000 441 3257 1 chr3B.!!$F1 2816
2 TraesCS3B01G484900 chr3B 754621214 754622478 1264 False 1053.000000 1053 81.939000 1162 2423 1 chr3B.!!$F3 1261
3 TraesCS3B01G484900 chr3A 688595550 688598442 2892 False 1152.466667 2662 92.968667 323 2947 3 chr3A.!!$F1 2624
4 TraesCS3B01G484900 chr3A 701221913 701223170 1257 True 507.050000 952 89.218000 1091 2360 2 chr3A.!!$R1 1269
5 TraesCS3B01G484900 chr3D 551370426 551371914 1488 False 1923.000000 1923 90.046000 351 1862 1 chr3D.!!$F1 1511
6 TraesCS3B01G484900 chr3D 551427219 551428406 1187 True 1240.000000 1240 85.952000 323 1538 1 chr3D.!!$R2 1215
7 TraesCS3B01G484900 chr3D 566075398 566076706 1308 False 1035.000000 1035 81.170000 1091 2408 1 chr3D.!!$F3 1317
8 TraesCS3B01G484900 chr3D 566001354 566002615 1261 False 902.000000 902 79.767000 1091 2371 1 chr3D.!!$F2 1280
9 TraesCS3B01G484900 chr3D 551398831 551403878 5047 True 802.500000 1668 90.599500 316 2956 4 chr3D.!!$R3 2640
10 TraesCS3B01G484900 chr3D 551386001 551386975 974 False 644.000000 981 89.459000 1850 2956 2 chr3D.!!$F5 1106

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
203 204 0.036732 AAGCTTGCCGAGATTGGTCA 59.963 50.0 0.0 0.0 31.56 4.02 F
204 205 0.036732 AGCTTGCCGAGATTGGTCAA 59.963 50.0 0.0 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1474 4392 4.922026 GCCGTCCGTGGTGTTGGT 62.922 66.667 0.0 0.0 0.0 3.67 R
2962 5935 3.495434 ACGTTGTGTCCCCAATTCTTA 57.505 42.857 0.0 0.0 0.0 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.855689 ATGACCATGAAGCCTTTTTCG 57.144 42.857 0.00 0.00 0.00 3.46
23 24 2.582052 TGACCATGAAGCCTTTTTCGT 58.418 42.857 0.00 0.00 0.00 3.85
24 25 2.293122 TGACCATGAAGCCTTTTTCGTG 59.707 45.455 0.00 1.89 41.56 4.35
25 26 2.552315 GACCATGAAGCCTTTTTCGTGA 59.448 45.455 8.99 0.00 43.55 4.35
26 27 2.554032 ACCATGAAGCCTTTTTCGTGAG 59.446 45.455 8.99 3.40 43.55 3.51
27 28 2.813754 CCATGAAGCCTTTTTCGTGAGA 59.186 45.455 8.99 0.00 43.55 3.27
28 29 3.120060 CCATGAAGCCTTTTTCGTGAGAG 60.120 47.826 8.99 0.00 43.55 3.20
29 30 3.469008 TGAAGCCTTTTTCGTGAGAGA 57.531 42.857 0.00 0.00 43.69 3.10
30 31 3.393800 TGAAGCCTTTTTCGTGAGAGAG 58.606 45.455 0.00 0.00 43.69 3.20
31 32 1.802069 AGCCTTTTTCGTGAGAGAGC 58.198 50.000 0.00 0.00 43.69 4.09
32 33 1.346068 AGCCTTTTTCGTGAGAGAGCT 59.654 47.619 0.00 0.00 43.69 4.09
33 34 2.147150 GCCTTTTTCGTGAGAGAGCTT 58.853 47.619 0.00 0.00 43.69 3.74
34 35 2.096019 GCCTTTTTCGTGAGAGAGCTTG 60.096 50.000 0.00 0.00 43.69 4.01
35 36 2.096019 CCTTTTTCGTGAGAGAGCTTGC 60.096 50.000 0.00 0.00 43.69 4.01
36 37 2.238942 TTTTCGTGAGAGAGCTTGCA 57.761 45.000 0.00 0.00 43.69 4.08
37 38 2.462456 TTTCGTGAGAGAGCTTGCAT 57.538 45.000 0.00 0.00 43.69 3.96
38 39 3.592898 TTTCGTGAGAGAGCTTGCATA 57.407 42.857 0.00 0.00 43.69 3.14
39 40 3.592898 TTCGTGAGAGAGCTTGCATAA 57.407 42.857 0.00 0.00 43.69 1.90
40 41 3.808466 TCGTGAGAGAGCTTGCATAAT 57.192 42.857 0.00 0.00 34.84 1.28
41 42 3.451526 TCGTGAGAGAGCTTGCATAATG 58.548 45.455 0.00 0.00 34.84 1.90
42 43 3.118992 TCGTGAGAGAGCTTGCATAATGT 60.119 43.478 0.00 0.00 34.84 2.71
43 44 4.097892 TCGTGAGAGAGCTTGCATAATGTA 59.902 41.667 0.00 0.00 34.84 2.29
44 45 4.443725 CGTGAGAGAGCTTGCATAATGTAG 59.556 45.833 0.00 0.00 0.00 2.74
45 46 5.355596 GTGAGAGAGCTTGCATAATGTAGT 58.644 41.667 0.00 0.00 0.00 2.73
46 47 5.814705 GTGAGAGAGCTTGCATAATGTAGTT 59.185 40.000 0.00 0.00 0.00 2.24
47 48 6.019156 GTGAGAGAGCTTGCATAATGTAGTTC 60.019 42.308 0.00 0.00 0.00 3.01
48 49 5.363939 AGAGAGCTTGCATAATGTAGTTCC 58.636 41.667 0.00 0.00 0.00 3.62
49 50 5.102953 AGAGCTTGCATAATGTAGTTCCA 57.897 39.130 0.00 0.00 0.00 3.53
50 51 5.688807 AGAGCTTGCATAATGTAGTTCCAT 58.311 37.500 0.00 0.00 0.00 3.41
51 52 6.125029 AGAGCTTGCATAATGTAGTTCCATT 58.875 36.000 0.00 0.00 38.54 3.16
52 53 6.261826 AGAGCTTGCATAATGTAGTTCCATTC 59.738 38.462 0.00 0.00 36.48 2.67
53 54 5.887598 AGCTTGCATAATGTAGTTCCATTCA 59.112 36.000 0.00 0.00 36.48 2.57
54 55 6.377996 AGCTTGCATAATGTAGTTCCATTCAA 59.622 34.615 0.00 0.00 36.48 2.69
55 56 6.694411 GCTTGCATAATGTAGTTCCATTCAAG 59.306 38.462 0.00 0.00 37.30 3.02
56 57 7.629222 GCTTGCATAATGTAGTTCCATTCAAGT 60.629 37.037 11.87 0.00 36.97 3.16
57 58 7.320443 TGCATAATGTAGTTCCATTCAAGTC 57.680 36.000 0.00 0.00 36.48 3.01
58 59 7.112122 TGCATAATGTAGTTCCATTCAAGTCT 58.888 34.615 0.00 0.00 36.48 3.24
59 60 8.264347 TGCATAATGTAGTTCCATTCAAGTCTA 58.736 33.333 0.00 0.00 36.48 2.59
60 61 9.277783 GCATAATGTAGTTCCATTCAAGTCTAT 57.722 33.333 0.00 0.00 36.48 1.98
62 63 9.698309 ATAATGTAGTTCCATTCAAGTCTATCG 57.302 33.333 0.00 0.00 36.48 2.92
63 64 6.769134 TGTAGTTCCATTCAAGTCTATCGA 57.231 37.500 0.00 0.00 0.00 3.59
64 65 7.165460 TGTAGTTCCATTCAAGTCTATCGAA 57.835 36.000 0.00 0.00 0.00 3.71
65 66 7.608153 TGTAGTTCCATTCAAGTCTATCGAAA 58.392 34.615 0.00 0.00 0.00 3.46
66 67 7.759886 TGTAGTTCCATTCAAGTCTATCGAAAG 59.240 37.037 0.00 0.00 0.00 2.62
67 68 6.702329 AGTTCCATTCAAGTCTATCGAAAGT 58.298 36.000 0.00 0.00 0.00 2.66
68 69 7.162082 AGTTCCATTCAAGTCTATCGAAAGTT 58.838 34.615 0.00 0.00 0.00 2.66
69 70 7.661847 AGTTCCATTCAAGTCTATCGAAAGTTT 59.338 33.333 0.00 0.00 0.00 2.66
70 71 7.979444 TCCATTCAAGTCTATCGAAAGTTTT 57.021 32.000 0.00 0.00 0.00 2.43
71 72 7.806690 TCCATTCAAGTCTATCGAAAGTTTTG 58.193 34.615 0.00 0.00 0.00 2.44
72 73 7.023575 CCATTCAAGTCTATCGAAAGTTTTGG 58.976 38.462 2.95 0.00 0.00 3.28
73 74 5.607119 TCAAGTCTATCGAAAGTTTTGGC 57.393 39.130 2.95 0.00 0.00 4.52
74 75 5.305585 TCAAGTCTATCGAAAGTTTTGGCT 58.694 37.500 2.95 0.00 0.00 4.75
75 76 6.460781 TCAAGTCTATCGAAAGTTTTGGCTA 58.539 36.000 2.95 0.00 0.00 3.93
76 77 6.932400 TCAAGTCTATCGAAAGTTTTGGCTAA 59.068 34.615 2.95 0.00 0.00 3.09
77 78 7.442969 TCAAGTCTATCGAAAGTTTTGGCTAAA 59.557 33.333 2.95 0.00 0.00 1.85
78 79 7.923414 AGTCTATCGAAAGTTTTGGCTAAAT 57.077 32.000 0.00 0.00 0.00 1.40
79 80 7.975750 AGTCTATCGAAAGTTTTGGCTAAATC 58.024 34.615 0.00 0.00 0.00 2.17
80 81 7.606456 AGTCTATCGAAAGTTTTGGCTAAATCA 59.394 33.333 6.41 0.00 0.00 2.57
81 82 8.234546 GTCTATCGAAAGTTTTGGCTAAATCAA 58.765 33.333 6.41 0.00 0.00 2.57
82 83 8.956426 TCTATCGAAAGTTTTGGCTAAATCAAT 58.044 29.630 6.41 0.00 0.00 2.57
83 84 9.573133 CTATCGAAAGTTTTGGCTAAATCAATT 57.427 29.630 6.41 1.60 0.00 2.32
84 85 8.831715 ATCGAAAGTTTTGGCTAAATCAATTT 57.168 26.923 6.41 0.22 0.00 1.82
85 86 8.655651 TCGAAAGTTTTGGCTAAATCAATTTT 57.344 26.923 6.41 0.00 0.00 1.82
86 87 9.751542 TCGAAAGTTTTGGCTAAATCAATTTTA 57.248 25.926 6.41 0.00 0.00 1.52
90 91 8.900983 AGTTTTGGCTAAATCAATTTTAAGCA 57.099 26.923 10.72 0.00 31.28 3.91
91 92 9.506018 AGTTTTGGCTAAATCAATTTTAAGCAT 57.494 25.926 10.72 0.00 31.28 3.79
92 93 9.545611 GTTTTGGCTAAATCAATTTTAAGCATG 57.454 29.630 10.72 0.00 31.28 4.06
93 94 9.499479 TTTTGGCTAAATCAATTTTAAGCATGA 57.501 25.926 0.00 0.00 31.28 3.07
94 95 9.499479 TTTGGCTAAATCAATTTTAAGCATGAA 57.501 25.926 0.00 2.54 31.28 2.57
95 96 9.499479 TTGGCTAAATCAATTTTAAGCATGAAA 57.501 25.926 0.00 0.00 31.28 2.69
96 97 9.153721 TGGCTAAATCAATTTTAAGCATGAAAG 57.846 29.630 0.00 0.00 31.28 2.62
97 98 8.118607 GGCTAAATCAATTTTAAGCATGAAAGC 58.881 33.333 0.00 3.16 31.28 3.51
98 99 7.842721 GCTAAATCAATTTTAAGCATGAAAGCG 59.157 33.333 0.00 0.00 40.15 4.68
99 100 6.651755 AATCAATTTTAAGCATGAAAGCGG 57.348 33.333 0.00 0.00 40.15 5.52
100 101 4.493547 TCAATTTTAAGCATGAAAGCGGG 58.506 39.130 0.00 0.00 40.15 6.13
101 102 3.525268 ATTTTAAGCATGAAAGCGGGG 57.475 42.857 0.00 0.00 40.15 5.73
102 103 1.181786 TTTAAGCATGAAAGCGGGGG 58.818 50.000 0.00 0.00 40.15 5.40
103 104 0.039035 TTAAGCATGAAAGCGGGGGT 59.961 50.000 0.00 0.00 40.15 4.95
104 105 0.039035 TAAGCATGAAAGCGGGGGTT 59.961 50.000 0.00 0.00 40.15 4.11
105 106 0.831711 AAGCATGAAAGCGGGGGTTT 60.832 50.000 0.00 0.00 40.15 3.27
106 107 0.831711 AGCATGAAAGCGGGGGTTTT 60.832 50.000 0.00 0.00 40.15 2.43
107 108 0.389817 GCATGAAAGCGGGGGTTTTC 60.390 55.000 0.00 0.00 33.25 2.29
108 109 0.246360 CATGAAAGCGGGGGTTTTCC 59.754 55.000 0.00 0.00 33.25 3.13
109 110 0.178947 ATGAAAGCGGGGGTTTTCCA 60.179 50.000 1.85 0.00 42.91 3.53
110 111 0.397254 TGAAAGCGGGGGTTTTCCAA 60.397 50.000 1.85 0.00 42.91 3.53
111 112 0.317160 GAAAGCGGGGGTTTTCCAAG 59.683 55.000 0.00 0.00 42.91 3.61
112 113 0.105913 AAAGCGGGGGTTTTCCAAGA 60.106 50.000 0.00 0.00 42.91 3.02
113 114 0.114364 AAGCGGGGGTTTTCCAAGAT 59.886 50.000 0.00 0.00 42.91 2.40
114 115 0.114364 AGCGGGGGTTTTCCAAGATT 59.886 50.000 0.00 0.00 42.91 2.40
115 116 0.973632 GCGGGGGTTTTCCAAGATTT 59.026 50.000 0.00 0.00 42.91 2.17
116 117 1.067142 GCGGGGGTTTTCCAAGATTTC 60.067 52.381 0.00 0.00 42.91 2.17
117 118 2.243810 CGGGGGTTTTCCAAGATTTCA 58.756 47.619 0.00 0.00 42.91 2.69
118 119 2.630580 CGGGGGTTTTCCAAGATTTCAA 59.369 45.455 0.00 0.00 42.91 2.69
119 120 3.070302 CGGGGGTTTTCCAAGATTTCAAA 59.930 43.478 0.00 0.00 42.91 2.69
120 121 4.641396 GGGGGTTTTCCAAGATTTCAAAG 58.359 43.478 0.00 0.00 42.91 2.77
121 122 4.065088 GGGGTTTTCCAAGATTTCAAAGC 58.935 43.478 0.00 0.00 42.91 3.51
122 123 4.444164 GGGGTTTTCCAAGATTTCAAAGCA 60.444 41.667 0.00 0.00 42.91 3.91
123 124 5.122519 GGGTTTTCCAAGATTTCAAAGCAA 58.877 37.500 0.00 0.00 42.91 3.91
124 125 5.588246 GGGTTTTCCAAGATTTCAAAGCAAA 59.412 36.000 0.00 0.00 42.91 3.68
125 126 6.094742 GGGTTTTCCAAGATTTCAAAGCAAAA 59.905 34.615 0.00 0.00 42.91 2.44
126 127 7.188834 GGTTTTCCAAGATTTCAAAGCAAAAG 58.811 34.615 0.00 0.00 40.31 2.27
127 128 7.065683 GGTTTTCCAAGATTTCAAAGCAAAAGA 59.934 33.333 0.00 0.00 40.31 2.52
128 129 7.775397 TTTCCAAGATTTCAAAGCAAAAGAG 57.225 32.000 0.00 0.00 0.00 2.85
129 130 6.469782 TCCAAGATTTCAAAGCAAAAGAGT 57.530 33.333 0.00 0.00 0.00 3.24
130 131 6.275335 TCCAAGATTTCAAAGCAAAAGAGTG 58.725 36.000 0.00 0.00 0.00 3.51
131 132 6.096705 TCCAAGATTTCAAAGCAAAAGAGTGA 59.903 34.615 0.00 0.00 0.00 3.41
132 133 6.420008 CCAAGATTTCAAAGCAAAAGAGTGAG 59.580 38.462 0.00 0.00 0.00 3.51
133 134 6.705863 AGATTTCAAAGCAAAAGAGTGAGT 57.294 33.333 0.00 0.00 0.00 3.41
134 135 7.105241 AGATTTCAAAGCAAAAGAGTGAGTT 57.895 32.000 0.00 0.00 0.00 3.01
135 136 8.225603 AGATTTCAAAGCAAAAGAGTGAGTTA 57.774 30.769 0.00 0.00 0.00 2.24
136 137 8.854117 AGATTTCAAAGCAAAAGAGTGAGTTAT 58.146 29.630 0.00 0.00 0.00 1.89
137 138 9.468532 GATTTCAAAGCAAAAGAGTGAGTTATT 57.531 29.630 0.00 0.00 0.00 1.40
138 139 9.822185 ATTTCAAAGCAAAAGAGTGAGTTATTT 57.178 25.926 0.00 0.00 0.00 1.40
139 140 8.856490 TTCAAAGCAAAAGAGTGAGTTATTTC 57.144 30.769 0.00 0.00 0.00 2.17
140 141 7.425606 TCAAAGCAAAAGAGTGAGTTATTTCC 58.574 34.615 0.00 0.00 0.00 3.13
141 142 7.285401 TCAAAGCAAAAGAGTGAGTTATTTCCT 59.715 33.333 0.00 0.00 0.00 3.36
142 143 6.566197 AGCAAAAGAGTGAGTTATTTCCTG 57.434 37.500 0.00 0.00 0.00 3.86
143 144 6.299141 AGCAAAAGAGTGAGTTATTTCCTGA 58.701 36.000 0.00 0.00 0.00 3.86
144 145 6.429385 AGCAAAAGAGTGAGTTATTTCCTGAG 59.571 38.462 0.00 0.00 0.00 3.35
145 146 6.606768 CAAAAGAGTGAGTTATTTCCTGAGC 58.393 40.000 0.00 0.00 0.00 4.26
146 147 5.753721 AAGAGTGAGTTATTTCCTGAGCT 57.246 39.130 0.00 0.00 0.00 4.09
147 148 6.859112 AAGAGTGAGTTATTTCCTGAGCTA 57.141 37.500 0.00 0.00 0.00 3.32
148 149 7.430760 AAGAGTGAGTTATTTCCTGAGCTAT 57.569 36.000 0.00 0.00 0.00 2.97
149 150 6.815089 AGAGTGAGTTATTTCCTGAGCTATG 58.185 40.000 0.00 0.00 0.00 2.23
150 151 6.609212 AGAGTGAGTTATTTCCTGAGCTATGA 59.391 38.462 0.00 0.00 0.00 2.15
151 152 7.289782 AGAGTGAGTTATTTCCTGAGCTATGAT 59.710 37.037 0.00 0.00 0.00 2.45
152 153 7.215789 AGTGAGTTATTTCCTGAGCTATGATG 58.784 38.462 0.00 0.00 0.00 3.07
153 154 7.070447 AGTGAGTTATTTCCTGAGCTATGATGA 59.930 37.037 0.00 0.00 0.00 2.92
154 155 7.877097 GTGAGTTATTTCCTGAGCTATGATGAT 59.123 37.037 0.00 0.00 0.00 2.45
155 156 9.093458 TGAGTTATTTCCTGAGCTATGATGATA 57.907 33.333 0.00 0.00 0.00 2.15
161 162 7.974482 TTCCTGAGCTATGATGATATTGTTG 57.026 36.000 0.00 0.00 0.00 3.33
162 163 5.936372 TCCTGAGCTATGATGATATTGTTGC 59.064 40.000 0.00 0.00 0.00 4.17
163 164 5.938710 CCTGAGCTATGATGATATTGTTGCT 59.061 40.000 0.00 0.00 0.00 3.91
164 165 7.038799 TCCTGAGCTATGATGATATTGTTGCTA 60.039 37.037 0.00 0.00 0.00 3.49
165 166 7.605309 CCTGAGCTATGATGATATTGTTGCTAA 59.395 37.037 0.00 0.00 0.00 3.09
166 167 9.163899 CTGAGCTATGATGATATTGTTGCTAAT 57.836 33.333 0.00 0.00 0.00 1.73
167 168 9.159364 TGAGCTATGATGATATTGTTGCTAATC 57.841 33.333 0.00 0.00 0.00 1.75
168 169 8.503458 AGCTATGATGATATTGTTGCTAATCC 57.497 34.615 0.00 0.00 0.00 3.01
169 170 8.327271 AGCTATGATGATATTGTTGCTAATCCT 58.673 33.333 0.00 0.00 0.00 3.24
170 171 8.954350 GCTATGATGATATTGTTGCTAATCCTT 58.046 33.333 0.00 0.00 0.00 3.36
174 175 9.494271 TGATGATATTGTTGCTAATCCTTCTAC 57.506 33.333 0.00 0.00 0.00 2.59
175 176 8.854614 ATGATATTGTTGCTAATCCTTCTACC 57.145 34.615 0.00 0.00 0.00 3.18
176 177 8.034313 TGATATTGTTGCTAATCCTTCTACCT 57.966 34.615 0.00 0.00 0.00 3.08
177 178 8.494433 TGATATTGTTGCTAATCCTTCTACCTT 58.506 33.333 0.00 0.00 0.00 3.50
178 179 8.910351 ATATTGTTGCTAATCCTTCTACCTTC 57.090 34.615 0.00 0.00 0.00 3.46
179 180 5.755409 TGTTGCTAATCCTTCTACCTTCA 57.245 39.130 0.00 0.00 0.00 3.02
180 181 6.121776 TGTTGCTAATCCTTCTACCTTCAA 57.878 37.500 0.00 0.00 0.00 2.69
181 182 6.721318 TGTTGCTAATCCTTCTACCTTCAAT 58.279 36.000 0.00 0.00 0.00 2.57
182 183 6.599244 TGTTGCTAATCCTTCTACCTTCAATG 59.401 38.462 0.00 0.00 0.00 2.82
183 184 6.560003 TGCTAATCCTTCTACCTTCAATGA 57.440 37.500 0.00 0.00 0.00 2.57
184 185 6.957631 TGCTAATCCTTCTACCTTCAATGAA 58.042 36.000 0.00 0.00 0.00 2.57
185 186 7.402054 TGCTAATCCTTCTACCTTCAATGAAA 58.598 34.615 0.00 0.00 0.00 2.69
186 187 7.554118 TGCTAATCCTTCTACCTTCAATGAAAG 59.446 37.037 0.00 0.00 0.00 2.62
187 188 6.765915 AATCCTTCTACCTTCAATGAAAGC 57.234 37.500 0.00 0.00 0.00 3.51
188 189 5.505181 TCCTTCTACCTTCAATGAAAGCT 57.495 39.130 0.00 0.00 0.00 3.74
189 190 5.880901 TCCTTCTACCTTCAATGAAAGCTT 58.119 37.500 0.00 0.00 0.00 3.74
190 191 5.707298 TCCTTCTACCTTCAATGAAAGCTTG 59.293 40.000 0.00 0.00 0.00 4.01
191 192 5.376854 TTCTACCTTCAATGAAAGCTTGC 57.623 39.130 0.00 0.00 0.00 4.01
192 193 3.758554 TCTACCTTCAATGAAAGCTTGCC 59.241 43.478 0.00 0.00 0.00 4.52
193 194 1.270550 ACCTTCAATGAAAGCTTGCCG 59.729 47.619 0.00 0.00 0.00 5.69
194 195 1.541147 CCTTCAATGAAAGCTTGCCGA 59.459 47.619 0.00 0.00 0.00 5.54
195 196 2.415090 CCTTCAATGAAAGCTTGCCGAG 60.415 50.000 0.00 0.00 0.00 4.63
196 197 2.183478 TCAATGAAAGCTTGCCGAGA 57.817 45.000 0.00 0.00 0.00 4.04
197 198 2.715046 TCAATGAAAGCTTGCCGAGAT 58.285 42.857 0.00 0.00 0.00 2.75
198 199 3.084039 TCAATGAAAGCTTGCCGAGATT 58.916 40.909 0.00 0.00 34.95 2.40
199 200 3.119743 TCAATGAAAGCTTGCCGAGATTG 60.120 43.478 0.00 4.26 33.47 2.67
200 201 1.167851 TGAAAGCTTGCCGAGATTGG 58.832 50.000 0.00 0.00 33.47 3.16
201 202 1.168714 GAAAGCTTGCCGAGATTGGT 58.831 50.000 0.00 0.00 33.47 3.67
202 203 1.131315 GAAAGCTTGCCGAGATTGGTC 59.869 52.381 0.00 0.00 33.47 4.02
203 204 0.036732 AAGCTTGCCGAGATTGGTCA 59.963 50.000 0.00 0.00 31.56 4.02
204 205 0.036732 AGCTTGCCGAGATTGGTCAA 59.963 50.000 0.00 0.00 0.00 3.18
205 206 1.098050 GCTTGCCGAGATTGGTCAAT 58.902 50.000 0.00 0.00 0.00 2.57
206 207 2.092968 AGCTTGCCGAGATTGGTCAATA 60.093 45.455 0.00 0.00 0.00 1.90
207 208 2.880890 GCTTGCCGAGATTGGTCAATAT 59.119 45.455 0.00 0.00 0.00 1.28
208 209 4.065088 GCTTGCCGAGATTGGTCAATATA 58.935 43.478 0.00 0.00 0.00 0.86
209 210 4.515191 GCTTGCCGAGATTGGTCAATATAA 59.485 41.667 0.00 0.00 0.00 0.98
210 211 5.182001 GCTTGCCGAGATTGGTCAATATAAT 59.818 40.000 0.00 0.00 0.00 1.28
211 212 6.621596 GCTTGCCGAGATTGGTCAATATAATC 60.622 42.308 0.00 0.00 0.00 1.75
212 213 5.245531 TGCCGAGATTGGTCAATATAATCC 58.754 41.667 0.00 0.00 32.59 3.01
213 214 4.330074 GCCGAGATTGGTCAATATAATCCG 59.670 45.833 0.00 0.00 32.59 4.18
214 215 5.479306 CCGAGATTGGTCAATATAATCCGT 58.521 41.667 0.00 0.00 32.59 4.69
215 216 5.577164 CCGAGATTGGTCAATATAATCCGTC 59.423 44.000 0.00 0.00 32.59 4.79
216 217 6.156519 CGAGATTGGTCAATATAATCCGTCA 58.843 40.000 0.00 0.00 32.59 4.35
217 218 6.645003 CGAGATTGGTCAATATAATCCGTCAA 59.355 38.462 0.00 0.00 32.59 3.18
218 219 7.170828 CGAGATTGGTCAATATAATCCGTCAAA 59.829 37.037 0.00 0.00 32.59 2.69
219 220 8.154649 AGATTGGTCAATATAATCCGTCAAAC 57.845 34.615 0.00 0.00 32.59 2.93
220 221 5.977171 TGGTCAATATAATCCGTCAAACG 57.023 39.130 0.00 0.00 42.11 3.60
221 222 5.662456 TGGTCAATATAATCCGTCAAACGA 58.338 37.500 0.24 0.00 46.05 3.85
222 223 5.751509 TGGTCAATATAATCCGTCAAACGAG 59.248 40.000 0.24 0.00 46.05 4.18
223 224 5.176958 GGTCAATATAATCCGTCAAACGAGG 59.823 44.000 0.24 0.00 46.05 4.63
224 225 5.751990 GTCAATATAATCCGTCAAACGAGGT 59.248 40.000 0.24 0.00 46.05 3.85
225 226 6.257193 GTCAATATAATCCGTCAAACGAGGTT 59.743 38.462 0.24 0.00 46.05 3.50
226 227 6.819649 TCAATATAATCCGTCAAACGAGGTTT 59.180 34.615 0.24 0.00 46.05 3.27
238 239 2.973945 ACGAGGTTTGAGTCTATTGGC 58.026 47.619 0.00 0.00 0.00 4.52
239 240 2.567615 ACGAGGTTTGAGTCTATTGGCT 59.432 45.455 0.00 0.00 0.00 4.75
240 241 3.767673 ACGAGGTTTGAGTCTATTGGCTA 59.232 43.478 0.00 0.00 0.00 3.93
241 242 4.142138 ACGAGGTTTGAGTCTATTGGCTAG 60.142 45.833 0.00 0.00 0.00 3.42
242 243 4.698575 GAGGTTTGAGTCTATTGGCTAGG 58.301 47.826 0.00 0.00 0.00 3.02
243 244 3.456277 AGGTTTGAGTCTATTGGCTAGGG 59.544 47.826 0.00 0.00 0.00 3.53
244 245 3.200165 GGTTTGAGTCTATTGGCTAGGGT 59.800 47.826 0.00 0.00 0.00 4.34
245 246 4.324331 GGTTTGAGTCTATTGGCTAGGGTT 60.324 45.833 0.00 0.00 0.00 4.11
246 247 5.254115 GTTTGAGTCTATTGGCTAGGGTTT 58.746 41.667 0.00 0.00 0.00 3.27
247 248 5.514500 TTGAGTCTATTGGCTAGGGTTTT 57.486 39.130 0.00 0.00 0.00 2.43
248 249 5.514500 TGAGTCTATTGGCTAGGGTTTTT 57.486 39.130 0.00 0.00 0.00 1.94
249 250 5.253330 TGAGTCTATTGGCTAGGGTTTTTG 58.747 41.667 0.00 0.00 0.00 2.44
250 251 4.017126 AGTCTATTGGCTAGGGTTTTTGC 58.983 43.478 0.00 0.00 0.00 3.68
251 252 4.017126 GTCTATTGGCTAGGGTTTTTGCT 58.983 43.478 0.00 0.00 0.00 3.91
252 253 5.045140 AGTCTATTGGCTAGGGTTTTTGCTA 60.045 40.000 0.00 0.00 0.00 3.49
253 254 5.828328 GTCTATTGGCTAGGGTTTTTGCTAT 59.172 40.000 0.00 0.00 0.00 2.97
254 255 5.827797 TCTATTGGCTAGGGTTTTTGCTATG 59.172 40.000 0.00 0.00 0.00 2.23
255 256 3.730215 TGGCTAGGGTTTTTGCTATGA 57.270 42.857 0.00 0.00 0.00 2.15
256 257 4.249638 TGGCTAGGGTTTTTGCTATGAT 57.750 40.909 0.00 0.00 0.00 2.45
257 258 4.609301 TGGCTAGGGTTTTTGCTATGATT 58.391 39.130 0.00 0.00 0.00 2.57
258 259 5.022787 TGGCTAGGGTTTTTGCTATGATTT 58.977 37.500 0.00 0.00 0.00 2.17
259 260 5.483583 TGGCTAGGGTTTTTGCTATGATTTT 59.516 36.000 0.00 0.00 0.00 1.82
260 261 5.812127 GGCTAGGGTTTTTGCTATGATTTTG 59.188 40.000 0.00 0.00 0.00 2.44
261 262 6.398095 GCTAGGGTTTTTGCTATGATTTTGT 58.602 36.000 0.00 0.00 0.00 2.83
262 263 7.363443 GGCTAGGGTTTTTGCTATGATTTTGTA 60.363 37.037 0.00 0.00 0.00 2.41
263 264 8.032451 GCTAGGGTTTTTGCTATGATTTTGTAA 58.968 33.333 0.00 0.00 0.00 2.41
264 265 9.921637 CTAGGGTTTTTGCTATGATTTTGTAAA 57.078 29.630 0.00 0.00 0.00 2.01
289 290 6.903883 AACATTACACAAGCTAATAGGTCG 57.096 37.500 0.00 0.00 0.00 4.79
290 291 6.216801 ACATTACACAAGCTAATAGGTCGA 57.783 37.500 0.00 0.00 0.00 4.20
291 292 6.636705 ACATTACACAAGCTAATAGGTCGAA 58.363 36.000 0.00 0.00 0.00 3.71
292 293 7.101054 ACATTACACAAGCTAATAGGTCGAAA 58.899 34.615 0.00 0.00 0.00 3.46
293 294 7.604927 ACATTACACAAGCTAATAGGTCGAAAA 59.395 33.333 0.00 0.00 0.00 2.29
294 295 5.857822 ACACAAGCTAATAGGTCGAAAAC 57.142 39.130 0.00 0.00 0.00 2.43
305 306 2.018717 GTCGAAAACCAGCAAGAACG 57.981 50.000 0.00 0.00 0.00 3.95
306 307 1.595794 GTCGAAAACCAGCAAGAACGA 59.404 47.619 0.00 0.00 0.00 3.85
307 308 1.595794 TCGAAAACCAGCAAGAACGAC 59.404 47.619 0.00 0.00 0.00 4.34
308 309 1.329292 CGAAAACCAGCAAGAACGACA 59.671 47.619 0.00 0.00 0.00 4.35
309 310 2.599848 CGAAAACCAGCAAGAACGACAG 60.600 50.000 0.00 0.00 0.00 3.51
310 311 2.325583 AAACCAGCAAGAACGACAGA 57.674 45.000 0.00 0.00 0.00 3.41
311 312 2.325583 AACCAGCAAGAACGACAGAA 57.674 45.000 0.00 0.00 0.00 3.02
312 313 2.325583 ACCAGCAAGAACGACAGAAA 57.674 45.000 0.00 0.00 0.00 2.52
313 314 1.940613 ACCAGCAAGAACGACAGAAAC 59.059 47.619 0.00 0.00 0.00 2.78
314 315 1.264288 CCAGCAAGAACGACAGAAACC 59.736 52.381 0.00 0.00 0.00 3.27
315 316 1.939934 CAGCAAGAACGACAGAAACCA 59.060 47.619 0.00 0.00 0.00 3.67
316 317 2.032549 CAGCAAGAACGACAGAAACCAG 60.033 50.000 0.00 0.00 0.00 4.00
317 318 1.334149 GCAAGAACGACAGAAACCAGC 60.334 52.381 0.00 0.00 0.00 4.85
318 319 2.213499 CAAGAACGACAGAAACCAGCT 58.787 47.619 0.00 0.00 0.00 4.24
319 320 2.614057 CAAGAACGACAGAAACCAGCTT 59.386 45.455 0.00 0.00 0.00 3.74
320 321 2.484889 AGAACGACAGAAACCAGCTTC 58.515 47.619 0.00 0.00 0.00 3.86
321 322 2.103263 AGAACGACAGAAACCAGCTTCT 59.897 45.455 0.00 0.00 36.02 2.85
326 327 4.452455 ACGACAGAAACCAGCTTCTTTATG 59.548 41.667 6.11 6.11 33.25 1.90
349 350 0.105964 CACTGTCCCCAAACGTCTGA 59.894 55.000 0.00 0.00 0.00 3.27
472 474 0.329596 GCAGTTGGGAGGTGGAAGAT 59.670 55.000 0.00 0.00 0.00 2.40
485 487 0.741221 GGAAGATGACGTGTGAGCCC 60.741 60.000 0.00 0.00 0.00 5.19
867 923 1.387084 GCGATTCGTCTGTGTCTTGTC 59.613 52.381 8.03 0.00 0.00 3.18
868 924 2.922758 GCGATTCGTCTGTGTCTTGTCT 60.923 50.000 8.03 0.00 0.00 3.41
1474 4392 2.058001 ACCACCATCTCGATCGCCA 61.058 57.895 11.09 0.00 0.00 5.69
2788 5757 7.284716 CCTAGGACCCCACTCAAAATATAAAAC 59.715 40.741 1.05 0.00 0.00 2.43
2981 5954 4.839668 TTTAAGAATTGGGGACACAACG 57.160 40.909 0.00 0.00 42.67 4.10
3029 6002 3.128589 CAGTCTCCTCTCAGTGACTTAGC 59.871 52.174 0.00 0.00 37.64 3.09
3159 6132 2.346541 CCAGAGACTGGCTCGCTGA 61.347 63.158 4.57 0.00 46.88 4.26
3191 6164 0.721718 CGGCAGTTTCTCGTGATTCC 59.278 55.000 0.00 0.00 0.00 3.01
3198 6171 5.178797 CAGTTTCTCGTGATTCCAGGTAAT 58.821 41.667 0.00 0.00 0.00 1.89
3199 6172 6.338146 CAGTTTCTCGTGATTCCAGGTAATA 58.662 40.000 0.00 0.00 0.00 0.98
3203 6176 6.332735 TCTCGTGATTCCAGGTAATATCTG 57.667 41.667 0.00 0.00 0.00 2.90
3243 6216 2.481276 CGATGCTACGGTTCCATTCAGA 60.481 50.000 0.00 0.00 0.00 3.27
3257 6230 3.306166 CCATTCAGACGATCGGTTTGTAC 59.694 47.826 20.98 1.87 32.76 2.90
3258 6231 3.646611 TTCAGACGATCGGTTTGTACA 57.353 42.857 20.98 0.00 32.76 2.90
3259 6232 2.937591 TCAGACGATCGGTTTGTACAC 58.062 47.619 20.98 0.00 32.76 2.90
3260 6233 2.555325 TCAGACGATCGGTTTGTACACT 59.445 45.455 20.98 0.00 32.76 3.55
3261 6234 3.752747 TCAGACGATCGGTTTGTACACTA 59.247 43.478 20.98 0.00 32.76 2.74
3262 6235 4.096311 CAGACGATCGGTTTGTACACTAG 58.904 47.826 20.98 0.00 0.00 2.57
3263 6236 3.755378 AGACGATCGGTTTGTACACTAGT 59.245 43.478 20.98 0.00 0.00 2.57
3264 6237 4.937620 AGACGATCGGTTTGTACACTAGTA 59.062 41.667 20.98 0.00 0.00 1.82
3265 6238 5.064452 AGACGATCGGTTTGTACACTAGTAG 59.936 44.000 20.98 0.00 0.00 2.57
3266 6239 4.937620 ACGATCGGTTTGTACACTAGTAGA 59.062 41.667 20.98 0.00 0.00 2.59
3267 6240 5.412594 ACGATCGGTTTGTACACTAGTAGAA 59.587 40.000 20.98 0.00 32.30 2.10
3268 6241 6.072508 ACGATCGGTTTGTACACTAGTAGAAA 60.073 38.462 20.98 0.00 40.07 2.52
3269 6242 6.803320 CGATCGGTTTGTACACTAGTAGAAAA 59.197 38.462 7.38 0.00 42.75 2.29
3270 6243 7.008086 CGATCGGTTTGTACACTAGTAGAAAAG 59.992 40.741 7.38 0.00 42.75 2.27
3271 6244 6.449698 TCGGTTTGTACACTAGTAGAAAAGG 58.550 40.000 3.59 0.00 42.75 3.11
3272 6245 5.636543 CGGTTTGTACACTAGTAGAAAAGGG 59.363 44.000 3.59 0.00 42.75 3.95
3273 6246 5.936372 GGTTTGTACACTAGTAGAAAAGGGG 59.064 44.000 3.59 0.00 42.75 4.79
3274 6247 5.750352 TTGTACACTAGTAGAAAAGGGGG 57.250 43.478 3.59 0.00 31.34 5.40
3275 6248 3.516700 TGTACACTAGTAGAAAAGGGGGC 59.483 47.826 3.59 0.00 0.00 5.80
3276 6249 2.627933 ACACTAGTAGAAAAGGGGGCA 58.372 47.619 3.59 0.00 0.00 5.36
3277 6250 2.983898 ACACTAGTAGAAAAGGGGGCAA 59.016 45.455 3.59 0.00 0.00 4.52
3278 6251 3.591977 ACACTAGTAGAAAAGGGGGCAAT 59.408 43.478 3.59 0.00 0.00 3.56
3279 6252 3.947834 CACTAGTAGAAAAGGGGGCAATG 59.052 47.826 3.59 0.00 0.00 2.82
3280 6253 2.532250 AGTAGAAAAGGGGGCAATGG 57.468 50.000 0.00 0.00 0.00 3.16
3281 6254 1.716503 AGTAGAAAAGGGGGCAATGGT 59.283 47.619 0.00 0.00 0.00 3.55
3282 6255 2.100197 GTAGAAAAGGGGGCAATGGTC 58.900 52.381 0.00 0.00 0.00 4.02
3283 6256 0.252239 AGAAAAGGGGGCAATGGTCC 60.252 55.000 0.00 0.00 38.40 4.46
3284 6257 0.544120 GAAAAGGGGGCAATGGTCCA 60.544 55.000 0.00 0.00 42.08 4.02
3285 6258 0.545071 AAAAGGGGGCAATGGTCCAG 60.545 55.000 0.00 0.00 42.08 3.86
3286 6259 2.460476 AAAGGGGGCAATGGTCCAGG 62.460 60.000 0.00 0.00 42.08 4.45
3292 6265 4.047125 CAATGGTCCAGGCCGGGT 62.047 66.667 22.25 0.00 34.36 5.28
3293 6266 3.728373 AATGGTCCAGGCCGGGTC 61.728 66.667 22.25 16.31 34.36 4.46
3308 6281 1.146263 GGTCAGCCCATTAGTCCCG 59.854 63.158 0.00 0.00 0.00 5.14
3309 6282 1.146263 GTCAGCCCATTAGTCCCGG 59.854 63.158 0.00 0.00 0.00 5.73
3310 6283 1.306654 TCAGCCCATTAGTCCCGGT 60.307 57.895 0.00 0.00 0.00 5.28
3311 6284 0.912487 TCAGCCCATTAGTCCCGGTT 60.912 55.000 0.00 0.00 0.00 4.44
3312 6285 0.463833 CAGCCCATTAGTCCCGGTTC 60.464 60.000 0.00 0.00 0.00 3.62
3313 6286 0.912487 AGCCCATTAGTCCCGGTTCA 60.912 55.000 0.00 0.00 0.00 3.18
3314 6287 0.034863 GCCCATTAGTCCCGGTTCAA 60.035 55.000 0.00 0.00 0.00 2.69
3315 6288 1.409661 GCCCATTAGTCCCGGTTCAAT 60.410 52.381 0.00 0.00 0.00 2.57
3316 6289 2.572290 CCCATTAGTCCCGGTTCAATC 58.428 52.381 0.00 0.00 0.00 2.67
3317 6290 2.572290 CCATTAGTCCCGGTTCAATCC 58.428 52.381 0.00 0.00 0.00 3.01
3318 6291 2.092646 CCATTAGTCCCGGTTCAATCCA 60.093 50.000 0.00 0.00 0.00 3.41
3319 6292 3.206150 CATTAGTCCCGGTTCAATCCAG 58.794 50.000 0.00 0.00 0.00 3.86
3320 6293 2.241281 TAGTCCCGGTTCAATCCAGA 57.759 50.000 0.00 0.00 0.00 3.86
3321 6294 1.358152 AGTCCCGGTTCAATCCAGAA 58.642 50.000 0.00 0.00 0.00 3.02
3322 6295 1.003233 AGTCCCGGTTCAATCCAGAAC 59.997 52.381 0.00 0.00 45.50 3.01
3327 6300 3.948735 GTTCAATCCAGAACCGGGA 57.051 52.632 6.32 0.00 41.52 5.14
3328 6301 1.450025 GTTCAATCCAGAACCGGGAC 58.550 55.000 6.32 0.00 41.52 4.46
3329 6302 0.326927 TTCAATCCAGAACCGGGACC 59.673 55.000 6.32 0.00 37.23 4.46
3330 6303 0.838554 TCAATCCAGAACCGGGACCA 60.839 55.000 6.32 0.00 37.23 4.02
3331 6304 0.037590 CAATCCAGAACCGGGACCAA 59.962 55.000 6.32 0.00 37.23 3.67
3332 6305 0.999712 AATCCAGAACCGGGACCAAT 59.000 50.000 6.32 0.00 37.23 3.16
3333 6306 0.255890 ATCCAGAACCGGGACCAATG 59.744 55.000 6.32 0.00 37.23 2.82
3334 6307 1.378514 CCAGAACCGGGACCAATGG 60.379 63.158 6.32 0.00 0.00 3.16
3335 6308 1.378514 CAGAACCGGGACCAATGGG 60.379 63.158 6.32 0.00 41.29 4.00
3336 6309 2.044352 GAACCGGGACCAATGGGG 60.044 66.667 6.32 0.00 44.81 4.96
3337 6310 3.655350 GAACCGGGACCAATGGGGG 62.655 68.421 6.32 1.69 42.91 5.40
3346 6319 3.632896 CAATGGGGGCATTGGACC 58.367 61.111 0.00 0.00 43.93 4.46
3352 6325 2.754254 GGGCATTGGACCCGGTTC 60.754 66.667 0.00 0.00 37.67 3.62
3353 6326 3.131478 GGCATTGGACCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
3354 6327 2.359478 GCATTGGACCCGGTTCGT 60.359 61.111 0.00 0.00 0.00 3.85
3355 6328 2.686816 GCATTGGACCCGGTTCGTG 61.687 63.158 0.00 0.00 0.00 4.35
3356 6329 1.004320 CATTGGACCCGGTTCGTGA 60.004 57.895 0.00 0.00 0.00 4.35
3357 6330 1.019278 CATTGGACCCGGTTCGTGAG 61.019 60.000 0.00 0.00 0.00 3.51
3358 6331 2.798148 ATTGGACCCGGTTCGTGAGC 62.798 60.000 0.00 0.00 0.00 4.26
3359 6332 4.754667 GGACCCGGTTCGTGAGCC 62.755 72.222 0.00 0.00 0.00 4.70
3360 6333 4.754667 GACCCGGTTCGTGAGCCC 62.755 72.222 0.00 0.00 0.00 5.19
3393 6366 3.061848 CCACGTGGGCCATTGGTC 61.062 66.667 27.57 0.54 0.00 4.02
3399 6372 2.445155 GGGCCATTGGTCCTGGTT 59.555 61.111 19.51 0.00 45.53 3.67
3400 6373 1.682344 GGGCCATTGGTCCTGGTTC 60.682 63.158 19.51 0.00 45.53 3.62
3401 6374 2.046285 GGCCATTGGTCCTGGTTCG 61.046 63.158 4.26 0.00 36.10 3.95
3402 6375 1.303317 GCCATTGGTCCTGGTTCGT 60.303 57.895 4.26 0.00 36.10 3.85
3403 6376 1.305930 GCCATTGGTCCTGGTTCGTC 61.306 60.000 4.26 0.00 36.10 4.20
3404 6377 0.324943 CCATTGGTCCTGGTTCGTCT 59.675 55.000 0.00 0.00 0.00 4.18
3405 6378 1.442769 CATTGGTCCTGGTTCGTCTG 58.557 55.000 0.00 0.00 0.00 3.51
3406 6379 0.324943 ATTGGTCCTGGTTCGTCTGG 59.675 55.000 0.00 0.00 0.00 3.86
3407 6380 0.761323 TTGGTCCTGGTTCGTCTGGA 60.761 55.000 0.00 0.00 33.28 3.86
3408 6381 4.990288 GTCCTGGTTCGTCTGGAC 57.010 61.111 12.91 12.91 44.46 4.02
3409 6382 1.292541 GTCCTGGTTCGTCTGGACC 59.707 63.158 15.42 0.00 44.74 4.46
3410 6383 1.155390 TCCTGGTTCGTCTGGACCT 59.845 57.895 0.00 0.00 31.19 3.85
3411 6384 0.471211 TCCTGGTTCGTCTGGACCTT 60.471 55.000 0.00 0.00 31.19 3.50
3412 6385 0.396811 CCTGGTTCGTCTGGACCTTT 59.603 55.000 0.00 0.00 0.00 3.11
3413 6386 1.202770 CCTGGTTCGTCTGGACCTTTT 60.203 52.381 0.00 0.00 0.00 2.27
3414 6387 1.873591 CTGGTTCGTCTGGACCTTTTG 59.126 52.381 0.00 0.00 0.00 2.44
3425 6398 3.771978 CCTTTTGGTCCCGGTTGG 58.228 61.111 0.00 0.00 34.07 3.77
3426 6399 1.152631 CCTTTTGGTCCCGGTTGGT 60.153 57.895 0.00 0.00 34.77 3.67
3427 6400 1.460273 CCTTTTGGTCCCGGTTGGTG 61.460 60.000 0.00 0.00 34.77 4.17
3428 6401 1.455959 TTTTGGTCCCGGTTGGTGG 60.456 57.895 0.00 0.00 34.77 4.61
3435 6408 2.667199 CCGGTTGGTGGGACGAAC 60.667 66.667 0.00 0.00 36.30 3.95
3437 6410 2.667199 GGTTGGTGGGACGAACCG 60.667 66.667 5.08 0.00 44.79 4.44
3438 6411 2.667199 GTTGGTGGGACGAACCGG 60.667 66.667 0.00 0.00 40.86 5.28
3439 6412 3.943691 TTGGTGGGACGAACCGGG 61.944 66.667 6.32 0.00 40.86 5.73
3440 6413 4.938074 TGGTGGGACGAACCGGGA 62.938 66.667 6.32 0.00 40.86 5.14
3441 6414 4.383861 GGTGGGACGAACCGGGAC 62.384 72.222 6.32 0.00 40.11 4.46
3442 6415 4.383861 GTGGGACGAACCGGGACC 62.384 72.222 6.32 0.00 40.11 4.46
3443 6416 4.938074 TGGGACGAACCGGGACCA 62.938 66.667 6.32 1.29 40.11 4.02
3444 6417 3.628982 GGGACGAACCGGGACCAA 61.629 66.667 6.32 0.00 40.11 3.67
3445 6418 2.666812 GGACGAACCGGGACCAAT 59.333 61.111 6.32 0.00 0.00 3.16
3446 6419 1.743995 GGACGAACCGGGACCAATG 60.744 63.158 6.32 0.00 0.00 2.82
3447 6420 1.004200 GACGAACCGGGACCAATGT 60.004 57.895 6.32 0.00 0.00 2.71
3448 6421 1.296056 GACGAACCGGGACCAATGTG 61.296 60.000 6.32 0.00 0.00 3.21
3449 6422 2.686816 CGAACCGGGACCAATGTGC 61.687 63.158 6.32 0.00 0.00 4.57
3458 6431 4.850193 CCAATGTGCCTTGGTCCT 57.150 55.556 2.47 0.00 40.72 3.85
3459 6432 2.269978 CCAATGTGCCTTGGTCCTG 58.730 57.895 2.47 0.00 40.72 3.86
3460 6433 1.252904 CCAATGTGCCTTGGTCCTGG 61.253 60.000 2.47 0.00 40.72 4.45
3466 6439 4.366684 CCTTGGTCCTGGCCCACC 62.367 72.222 0.00 4.22 0.00 4.61
3467 6440 3.579302 CTTGGTCCTGGCCCACCA 61.579 66.667 13.13 13.13 46.51 4.17
3468 6441 3.868200 CTTGGTCCTGGCCCACCAC 62.868 68.421 16.10 0.67 42.61 4.16
3471 6444 3.661648 GTCCTGGCCCACCACCAT 61.662 66.667 0.00 0.00 42.67 3.55
3472 6445 2.863484 TCCTGGCCCACCACCATT 60.863 61.111 0.00 0.00 42.67 3.16
3473 6446 2.681064 CCTGGCCCACCACCATTG 60.681 66.667 0.00 0.00 42.67 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.573967 ACGAAAAAGGCTTCATGGTCATT 59.426 39.130 0.00 0.00 0.00 2.57
2 3 3.057315 CACGAAAAAGGCTTCATGGTCAT 60.057 43.478 0.00 0.00 0.00 3.06
4 5 2.552315 TCACGAAAAAGGCTTCATGGTC 59.448 45.455 0.00 0.00 0.00 4.02
5 6 2.554032 CTCACGAAAAAGGCTTCATGGT 59.446 45.455 0.00 0.00 0.00 3.55
6 7 2.813754 TCTCACGAAAAAGGCTTCATGG 59.186 45.455 0.00 0.00 0.00 3.66
7 8 3.748048 TCTCTCACGAAAAAGGCTTCATG 59.252 43.478 0.00 0.00 0.00 3.07
8 9 3.999663 CTCTCTCACGAAAAAGGCTTCAT 59.000 43.478 0.00 0.00 0.00 2.57
9 10 3.393800 CTCTCTCACGAAAAAGGCTTCA 58.606 45.455 0.00 0.00 0.00 3.02
10 11 2.158645 GCTCTCTCACGAAAAAGGCTTC 59.841 50.000 0.00 0.00 0.00 3.86
11 12 2.147150 GCTCTCTCACGAAAAAGGCTT 58.853 47.619 0.00 0.00 0.00 4.35
12 13 1.346068 AGCTCTCTCACGAAAAAGGCT 59.654 47.619 0.00 0.00 0.00 4.58
13 14 1.802069 AGCTCTCTCACGAAAAAGGC 58.198 50.000 0.00 0.00 0.00 4.35
14 15 2.096019 GCAAGCTCTCTCACGAAAAAGG 60.096 50.000 0.00 0.00 0.00 3.11
15 16 2.545526 TGCAAGCTCTCTCACGAAAAAG 59.454 45.455 0.00 0.00 0.00 2.27
16 17 2.560504 TGCAAGCTCTCTCACGAAAAA 58.439 42.857 0.00 0.00 0.00 1.94
17 18 2.238942 TGCAAGCTCTCTCACGAAAA 57.761 45.000 0.00 0.00 0.00 2.29
18 19 2.462456 ATGCAAGCTCTCTCACGAAA 57.538 45.000 0.00 0.00 0.00 3.46
19 20 3.592898 TTATGCAAGCTCTCTCACGAA 57.407 42.857 0.00 0.00 0.00 3.85
20 21 3.118992 ACATTATGCAAGCTCTCTCACGA 60.119 43.478 0.00 0.00 0.00 4.35
21 22 3.193263 ACATTATGCAAGCTCTCTCACG 58.807 45.455 0.00 0.00 0.00 4.35
22 23 5.355596 ACTACATTATGCAAGCTCTCTCAC 58.644 41.667 0.00 0.00 0.00 3.51
23 24 5.604758 ACTACATTATGCAAGCTCTCTCA 57.395 39.130 0.00 0.00 0.00 3.27
24 25 5.465056 GGAACTACATTATGCAAGCTCTCTC 59.535 44.000 0.00 0.00 0.00 3.20
25 26 5.104776 TGGAACTACATTATGCAAGCTCTCT 60.105 40.000 0.00 0.00 0.00 3.10
26 27 5.118990 TGGAACTACATTATGCAAGCTCTC 58.881 41.667 0.00 0.00 0.00 3.20
27 28 5.102953 TGGAACTACATTATGCAAGCTCT 57.897 39.130 0.00 0.00 0.00 4.09
28 29 6.038603 TGAATGGAACTACATTATGCAAGCTC 59.961 38.462 0.00 0.00 40.92 4.09
29 30 5.887598 TGAATGGAACTACATTATGCAAGCT 59.112 36.000 0.00 0.00 40.92 3.74
30 31 6.135290 TGAATGGAACTACATTATGCAAGC 57.865 37.500 0.00 0.00 40.92 4.01
31 32 7.765307 ACTTGAATGGAACTACATTATGCAAG 58.235 34.615 10.73 10.73 40.92 4.01
32 33 7.611467 AGACTTGAATGGAACTACATTATGCAA 59.389 33.333 0.00 0.00 40.92 4.08
33 34 7.112122 AGACTTGAATGGAACTACATTATGCA 58.888 34.615 0.00 0.00 40.92 3.96
34 35 7.559590 AGACTTGAATGGAACTACATTATGC 57.440 36.000 0.00 0.00 40.92 3.14
36 37 9.698309 CGATAGACTTGAATGGAACTACATTAT 57.302 33.333 0.00 0.00 38.84 1.28
37 38 8.909923 TCGATAGACTTGAATGGAACTACATTA 58.090 33.333 0.00 0.00 39.88 1.90
38 39 7.782049 TCGATAGACTTGAATGGAACTACATT 58.218 34.615 0.00 0.00 41.50 2.71
39 40 7.348080 TCGATAGACTTGAATGGAACTACAT 57.652 36.000 0.00 0.00 42.67 2.29
40 41 6.769134 TCGATAGACTTGAATGGAACTACA 57.231 37.500 0.00 0.00 42.67 2.74
57 58 9.573133 AATTGATTTAGCCAAAACTTTCGATAG 57.427 29.630 0.92 0.92 0.00 2.08
58 59 9.921637 AAATTGATTTAGCCAAAACTTTCGATA 57.078 25.926 0.00 0.00 0.00 2.92
59 60 8.831715 AAATTGATTTAGCCAAAACTTTCGAT 57.168 26.923 0.00 0.00 0.00 3.59
60 61 8.655651 AAAATTGATTTAGCCAAAACTTTCGA 57.344 26.923 0.00 0.00 0.00 3.71
64 65 9.336171 TGCTTAAAATTGATTTAGCCAAAACTT 57.664 25.926 8.12 0.00 35.03 2.66
65 66 8.900983 TGCTTAAAATTGATTTAGCCAAAACT 57.099 26.923 8.12 0.00 35.03 2.66
66 67 9.545611 CATGCTTAAAATTGATTTAGCCAAAAC 57.454 29.630 8.12 0.00 35.03 2.43
67 68 9.499479 TCATGCTTAAAATTGATTTAGCCAAAA 57.501 25.926 8.12 0.00 35.03 2.44
68 69 9.499479 TTCATGCTTAAAATTGATTTAGCCAAA 57.501 25.926 8.12 0.00 35.03 3.28
69 70 9.499479 TTTCATGCTTAAAATTGATTTAGCCAA 57.501 25.926 8.12 0.00 35.03 4.52
70 71 9.153721 CTTTCATGCTTAAAATTGATTTAGCCA 57.846 29.630 8.12 0.35 35.03 4.75
71 72 8.118607 GCTTTCATGCTTAAAATTGATTTAGCC 58.881 33.333 8.12 0.00 35.03 3.93
72 73 7.842721 CGCTTTCATGCTTAAAATTGATTTAGC 59.157 33.333 4.89 4.89 35.03 3.09
73 74 8.323140 CCGCTTTCATGCTTAAAATTGATTTAG 58.677 33.333 0.00 0.00 35.03 1.85
74 75 7.277539 CCCGCTTTCATGCTTAAAATTGATTTA 59.722 33.333 0.00 0.00 32.27 1.40
75 76 6.092533 CCCGCTTTCATGCTTAAAATTGATTT 59.907 34.615 0.00 0.00 34.92 2.17
76 77 5.581874 CCCGCTTTCATGCTTAAAATTGATT 59.418 36.000 0.00 0.00 0.00 2.57
77 78 5.111293 CCCGCTTTCATGCTTAAAATTGAT 58.889 37.500 0.00 0.00 0.00 2.57
78 79 4.493547 CCCGCTTTCATGCTTAAAATTGA 58.506 39.130 0.00 0.00 0.00 2.57
79 80 3.618150 CCCCGCTTTCATGCTTAAAATTG 59.382 43.478 0.00 0.00 0.00 2.32
80 81 3.369366 CCCCCGCTTTCATGCTTAAAATT 60.369 43.478 0.00 0.00 0.00 1.82
81 82 2.168313 CCCCCGCTTTCATGCTTAAAAT 59.832 45.455 0.00 0.00 0.00 1.82
82 83 1.548269 CCCCCGCTTTCATGCTTAAAA 59.452 47.619 0.00 0.00 0.00 1.52
83 84 1.181786 CCCCCGCTTTCATGCTTAAA 58.818 50.000 0.00 0.00 0.00 1.52
84 85 0.039035 ACCCCCGCTTTCATGCTTAA 59.961 50.000 0.00 0.00 0.00 1.85
85 86 0.039035 AACCCCCGCTTTCATGCTTA 59.961 50.000 0.00 0.00 0.00 3.09
86 87 0.831711 AAACCCCCGCTTTCATGCTT 60.832 50.000 0.00 0.00 0.00 3.91
87 88 0.831711 AAAACCCCCGCTTTCATGCT 60.832 50.000 0.00 0.00 0.00 3.79
88 89 0.389817 GAAAACCCCCGCTTTCATGC 60.390 55.000 0.00 0.00 32.80 4.06
89 90 0.246360 GGAAAACCCCCGCTTTCATG 59.754 55.000 0.00 0.00 33.96 3.07
90 91 0.178947 TGGAAAACCCCCGCTTTCAT 60.179 50.000 0.00 0.00 33.96 2.57
91 92 0.397254 TTGGAAAACCCCCGCTTTCA 60.397 50.000 0.00 0.00 33.96 2.69
92 93 0.317160 CTTGGAAAACCCCCGCTTTC 59.683 55.000 0.00 0.00 0.00 2.62
93 94 0.105913 TCTTGGAAAACCCCCGCTTT 60.106 50.000 0.00 0.00 0.00 3.51
94 95 0.114364 ATCTTGGAAAACCCCCGCTT 59.886 50.000 0.00 0.00 0.00 4.68
95 96 0.114364 AATCTTGGAAAACCCCCGCT 59.886 50.000 0.00 0.00 0.00 5.52
96 97 0.973632 AAATCTTGGAAAACCCCCGC 59.026 50.000 0.00 0.00 0.00 6.13
97 98 2.243810 TGAAATCTTGGAAAACCCCCG 58.756 47.619 0.00 0.00 0.00 5.73
98 99 4.641396 CTTTGAAATCTTGGAAAACCCCC 58.359 43.478 0.00 0.00 0.00 5.40
99 100 4.065088 GCTTTGAAATCTTGGAAAACCCC 58.935 43.478 0.00 0.00 0.00 4.95
100 101 4.702831 TGCTTTGAAATCTTGGAAAACCC 58.297 39.130 0.00 0.00 0.00 4.11
101 102 6.676237 TTTGCTTTGAAATCTTGGAAAACC 57.324 33.333 0.00 0.00 0.00 3.27
102 103 7.973601 TCTTTTGCTTTGAAATCTTGGAAAAC 58.026 30.769 0.00 0.00 0.00 2.43
103 104 7.823799 ACTCTTTTGCTTTGAAATCTTGGAAAA 59.176 29.630 0.00 0.00 0.00 2.29
104 105 7.278424 CACTCTTTTGCTTTGAAATCTTGGAAA 59.722 33.333 0.00 0.00 0.00 3.13
105 106 6.757947 CACTCTTTTGCTTTGAAATCTTGGAA 59.242 34.615 0.00 0.00 0.00 3.53
106 107 6.096705 TCACTCTTTTGCTTTGAAATCTTGGA 59.903 34.615 0.00 0.00 0.00 3.53
107 108 6.275335 TCACTCTTTTGCTTTGAAATCTTGG 58.725 36.000 0.00 0.00 0.00 3.61
108 109 6.976925 ACTCACTCTTTTGCTTTGAAATCTTG 59.023 34.615 0.00 0.00 0.00 3.02
109 110 7.105241 ACTCACTCTTTTGCTTTGAAATCTT 57.895 32.000 0.00 0.00 0.00 2.40
110 111 6.705863 ACTCACTCTTTTGCTTTGAAATCT 57.294 33.333 0.00 0.00 0.00 2.40
111 112 9.468532 AATAACTCACTCTTTTGCTTTGAAATC 57.531 29.630 0.00 0.00 0.00 2.17
112 113 9.822185 AAATAACTCACTCTTTTGCTTTGAAAT 57.178 25.926 0.00 0.00 0.00 2.17
113 114 9.301153 GAAATAACTCACTCTTTTGCTTTGAAA 57.699 29.630 0.00 0.00 0.00 2.69
114 115 7.920682 GGAAATAACTCACTCTTTTGCTTTGAA 59.079 33.333 0.00 0.00 0.00 2.69
115 116 7.285401 AGGAAATAACTCACTCTTTTGCTTTGA 59.715 33.333 0.00 0.00 0.00 2.69
116 117 7.380602 CAGGAAATAACTCACTCTTTTGCTTTG 59.619 37.037 0.00 0.00 0.00 2.77
117 118 7.285401 TCAGGAAATAACTCACTCTTTTGCTTT 59.715 33.333 0.00 0.00 0.00 3.51
118 119 6.772716 TCAGGAAATAACTCACTCTTTTGCTT 59.227 34.615 0.00 0.00 0.00 3.91
119 120 6.299141 TCAGGAAATAACTCACTCTTTTGCT 58.701 36.000 0.00 0.00 0.00 3.91
120 121 6.560253 TCAGGAAATAACTCACTCTTTTGC 57.440 37.500 0.00 0.00 0.00 3.68
121 122 6.429385 AGCTCAGGAAATAACTCACTCTTTTG 59.571 38.462 0.00 0.00 0.00 2.44
122 123 6.538263 AGCTCAGGAAATAACTCACTCTTTT 58.462 36.000 0.00 0.00 0.00 2.27
123 124 6.120507 AGCTCAGGAAATAACTCACTCTTT 57.879 37.500 0.00 0.00 0.00 2.52
124 125 5.753721 AGCTCAGGAAATAACTCACTCTT 57.246 39.130 0.00 0.00 0.00 2.85
125 126 6.609212 TCATAGCTCAGGAAATAACTCACTCT 59.391 38.462 0.00 0.00 0.00 3.24
126 127 6.810911 TCATAGCTCAGGAAATAACTCACTC 58.189 40.000 0.00 0.00 0.00 3.51
127 128 6.798427 TCATAGCTCAGGAAATAACTCACT 57.202 37.500 0.00 0.00 0.00 3.41
128 129 7.212976 TCATCATAGCTCAGGAAATAACTCAC 58.787 38.462 0.00 0.00 0.00 3.51
129 130 7.365497 TCATCATAGCTCAGGAAATAACTCA 57.635 36.000 0.00 0.00 0.00 3.41
135 136 9.011095 CAACAATATCATCATAGCTCAGGAAAT 57.989 33.333 0.00 0.00 0.00 2.17
136 137 7.040892 GCAACAATATCATCATAGCTCAGGAAA 60.041 37.037 0.00 0.00 0.00 3.13
137 138 6.429078 GCAACAATATCATCATAGCTCAGGAA 59.571 38.462 0.00 0.00 0.00 3.36
138 139 5.936372 GCAACAATATCATCATAGCTCAGGA 59.064 40.000 0.00 0.00 0.00 3.86
139 140 5.938710 AGCAACAATATCATCATAGCTCAGG 59.061 40.000 0.00 0.00 0.00 3.86
140 141 8.543862 TTAGCAACAATATCATCATAGCTCAG 57.456 34.615 0.00 0.00 0.00 3.35
141 142 9.159364 GATTAGCAACAATATCATCATAGCTCA 57.841 33.333 0.00 0.00 0.00 4.26
142 143 8.610896 GGATTAGCAACAATATCATCATAGCTC 58.389 37.037 0.00 0.00 0.00 4.09
143 144 8.327271 AGGATTAGCAACAATATCATCATAGCT 58.673 33.333 0.00 0.00 0.00 3.32
144 145 8.503458 AGGATTAGCAACAATATCATCATAGC 57.497 34.615 0.00 0.00 0.00 2.97
148 149 9.494271 GTAGAAGGATTAGCAACAATATCATCA 57.506 33.333 0.00 0.00 0.00 3.07
149 150 8.940952 GGTAGAAGGATTAGCAACAATATCATC 58.059 37.037 0.00 0.00 0.00 2.92
150 151 8.664079 AGGTAGAAGGATTAGCAACAATATCAT 58.336 33.333 0.00 0.00 0.00 2.45
151 152 8.034313 AGGTAGAAGGATTAGCAACAATATCA 57.966 34.615 0.00 0.00 0.00 2.15
152 153 8.910351 AAGGTAGAAGGATTAGCAACAATATC 57.090 34.615 0.00 0.00 0.00 1.63
153 154 8.494433 TGAAGGTAGAAGGATTAGCAACAATAT 58.506 33.333 0.00 0.00 0.00 1.28
154 155 7.857456 TGAAGGTAGAAGGATTAGCAACAATA 58.143 34.615 0.00 0.00 0.00 1.90
155 156 6.721318 TGAAGGTAGAAGGATTAGCAACAAT 58.279 36.000 0.00 0.00 0.00 2.71
156 157 6.121776 TGAAGGTAGAAGGATTAGCAACAA 57.878 37.500 0.00 0.00 0.00 2.83
157 158 5.755409 TGAAGGTAGAAGGATTAGCAACA 57.245 39.130 0.00 0.00 0.00 3.33
158 159 6.823689 TCATTGAAGGTAGAAGGATTAGCAAC 59.176 38.462 0.00 0.00 0.00 4.17
159 160 6.957631 TCATTGAAGGTAGAAGGATTAGCAA 58.042 36.000 0.00 0.00 0.00 3.91
160 161 6.560003 TCATTGAAGGTAGAAGGATTAGCA 57.440 37.500 0.00 0.00 0.00 3.49
161 162 7.467947 GCTTTCATTGAAGGTAGAAGGATTAGC 60.468 40.741 9.88 3.42 0.00 3.09
162 163 7.772757 AGCTTTCATTGAAGGTAGAAGGATTAG 59.227 37.037 9.88 0.00 35.74 1.73
163 164 7.633789 AGCTTTCATTGAAGGTAGAAGGATTA 58.366 34.615 9.88 0.00 35.74 1.75
164 165 6.488715 AGCTTTCATTGAAGGTAGAAGGATT 58.511 36.000 9.88 0.00 35.74 3.01
165 166 6.072199 AGCTTTCATTGAAGGTAGAAGGAT 57.928 37.500 9.88 0.00 35.74 3.24
166 167 5.505181 AGCTTTCATTGAAGGTAGAAGGA 57.495 39.130 9.88 0.00 35.74 3.36
167 168 5.620879 GCAAGCTTTCATTGAAGGTAGAAGG 60.621 44.000 9.88 0.00 36.42 3.46
168 169 5.397326 GCAAGCTTTCATTGAAGGTAGAAG 58.603 41.667 9.88 0.65 36.42 2.85
169 170 4.218417 GGCAAGCTTTCATTGAAGGTAGAA 59.782 41.667 9.88 0.00 36.42 2.10
170 171 3.758554 GGCAAGCTTTCATTGAAGGTAGA 59.241 43.478 9.88 0.00 36.42 2.59
171 172 3.426695 CGGCAAGCTTTCATTGAAGGTAG 60.427 47.826 9.88 1.96 36.42 3.18
172 173 2.487762 CGGCAAGCTTTCATTGAAGGTA 59.512 45.455 9.88 0.00 36.42 3.08
173 174 1.270550 CGGCAAGCTTTCATTGAAGGT 59.729 47.619 9.88 3.32 38.90 3.50
174 175 1.541147 TCGGCAAGCTTTCATTGAAGG 59.459 47.619 0.00 4.25 0.00 3.46
175 176 2.485426 TCTCGGCAAGCTTTCATTGAAG 59.515 45.455 0.00 0.00 0.00 3.02
176 177 2.503331 TCTCGGCAAGCTTTCATTGAA 58.497 42.857 0.00 0.00 0.00 2.69
177 178 2.183478 TCTCGGCAAGCTTTCATTGA 57.817 45.000 0.00 0.00 0.00 2.57
178 179 3.176708 CAATCTCGGCAAGCTTTCATTG 58.823 45.455 0.00 0.00 0.00 2.82
179 180 2.165030 CCAATCTCGGCAAGCTTTCATT 59.835 45.455 0.00 0.00 0.00 2.57
180 181 1.747355 CCAATCTCGGCAAGCTTTCAT 59.253 47.619 0.00 0.00 0.00 2.57
181 182 1.167851 CCAATCTCGGCAAGCTTTCA 58.832 50.000 0.00 0.00 0.00 2.69
182 183 1.131315 GACCAATCTCGGCAAGCTTTC 59.869 52.381 0.00 0.00 0.00 2.62
183 184 1.168714 GACCAATCTCGGCAAGCTTT 58.831 50.000 0.00 0.00 0.00 3.51
184 185 0.036732 TGACCAATCTCGGCAAGCTT 59.963 50.000 0.00 0.00 0.00 3.74
185 186 0.036732 TTGACCAATCTCGGCAAGCT 59.963 50.000 0.00 0.00 0.00 3.74
186 187 1.098050 ATTGACCAATCTCGGCAAGC 58.902 50.000 0.00 0.00 0.00 4.01
187 188 6.128172 GGATTATATTGACCAATCTCGGCAAG 60.128 42.308 0.00 0.00 32.50 4.01
188 189 5.705441 GGATTATATTGACCAATCTCGGCAA 59.295 40.000 0.00 0.00 32.50 4.52
189 190 5.245531 GGATTATATTGACCAATCTCGGCA 58.754 41.667 0.00 0.00 32.50 5.69
190 191 4.330074 CGGATTATATTGACCAATCTCGGC 59.670 45.833 0.00 0.00 32.50 5.54
191 192 5.479306 ACGGATTATATTGACCAATCTCGG 58.521 41.667 0.00 1.30 32.01 4.63
192 193 6.156519 TGACGGATTATATTGACCAATCTCG 58.843 40.000 0.00 0.00 33.00 4.04
193 194 7.962964 TTGACGGATTATATTGACCAATCTC 57.037 36.000 0.00 0.00 32.50 2.75
194 195 7.042051 CGTTTGACGGATTATATTGACCAATCT 60.042 37.037 0.00 0.00 38.08 2.40
195 196 7.042321 TCGTTTGACGGATTATATTGACCAATC 60.042 37.037 0.00 0.00 42.81 2.67
196 197 6.764085 TCGTTTGACGGATTATATTGACCAAT 59.236 34.615 0.27 0.64 42.81 3.16
197 198 6.107343 TCGTTTGACGGATTATATTGACCAA 58.893 36.000 0.27 0.00 42.81 3.67
198 199 5.662456 TCGTTTGACGGATTATATTGACCA 58.338 37.500 0.27 0.00 42.81 4.02
199 200 5.176958 CCTCGTTTGACGGATTATATTGACC 59.823 44.000 0.27 0.00 42.81 4.02
200 201 5.751990 ACCTCGTTTGACGGATTATATTGAC 59.248 40.000 0.27 0.00 42.81 3.18
201 202 5.909477 ACCTCGTTTGACGGATTATATTGA 58.091 37.500 0.27 0.00 42.81 2.57
202 203 6.598753 AACCTCGTTTGACGGATTATATTG 57.401 37.500 0.27 0.00 42.81 1.90
215 216 8.996541 CTAGCCAATAGACTCAAACCTCGTTTG 61.997 44.444 10.33 10.33 42.41 2.93
216 217 3.751698 GCCAATAGACTCAAACCTCGTTT 59.248 43.478 0.00 0.00 36.05 3.60
217 218 3.008049 AGCCAATAGACTCAAACCTCGTT 59.992 43.478 0.00 0.00 0.00 3.85
218 219 2.567615 AGCCAATAGACTCAAACCTCGT 59.432 45.455 0.00 0.00 0.00 4.18
219 220 3.252974 AGCCAATAGACTCAAACCTCG 57.747 47.619 0.00 0.00 0.00 4.63
220 221 4.443598 CCCTAGCCAATAGACTCAAACCTC 60.444 50.000 0.00 0.00 32.76 3.85
221 222 3.456277 CCCTAGCCAATAGACTCAAACCT 59.544 47.826 0.00 0.00 32.76 3.50
222 223 3.200165 ACCCTAGCCAATAGACTCAAACC 59.800 47.826 0.00 0.00 32.76 3.27
223 224 4.489306 ACCCTAGCCAATAGACTCAAAC 57.511 45.455 0.00 0.00 32.76 2.93
224 225 5.514500 AAACCCTAGCCAATAGACTCAAA 57.486 39.130 0.00 0.00 32.76 2.69
225 226 5.514500 AAAACCCTAGCCAATAGACTCAA 57.486 39.130 0.00 0.00 32.76 3.02
226 227 5.253330 CAAAAACCCTAGCCAATAGACTCA 58.747 41.667 0.00 0.00 32.76 3.41
227 228 4.096532 GCAAAAACCCTAGCCAATAGACTC 59.903 45.833 0.00 0.00 32.76 3.36
228 229 4.017126 GCAAAAACCCTAGCCAATAGACT 58.983 43.478 0.00 0.00 32.76 3.24
229 230 4.017126 AGCAAAAACCCTAGCCAATAGAC 58.983 43.478 0.00 0.00 32.76 2.59
230 231 4.316025 AGCAAAAACCCTAGCCAATAGA 57.684 40.909 0.00 0.00 32.76 1.98
231 232 5.827797 TCATAGCAAAAACCCTAGCCAATAG 59.172 40.000 0.00 0.00 0.00 1.73
232 233 5.761205 TCATAGCAAAAACCCTAGCCAATA 58.239 37.500 0.00 0.00 0.00 1.90
233 234 4.609301 TCATAGCAAAAACCCTAGCCAAT 58.391 39.130 0.00 0.00 0.00 3.16
234 235 4.040936 TCATAGCAAAAACCCTAGCCAA 57.959 40.909 0.00 0.00 0.00 4.52
235 236 3.730215 TCATAGCAAAAACCCTAGCCA 57.270 42.857 0.00 0.00 0.00 4.75
236 237 5.598416 AAATCATAGCAAAAACCCTAGCC 57.402 39.130 0.00 0.00 0.00 3.93
237 238 6.398095 ACAAAATCATAGCAAAAACCCTAGC 58.602 36.000 0.00 0.00 0.00 3.42
238 239 9.921637 TTTACAAAATCATAGCAAAAACCCTAG 57.078 29.630 0.00 0.00 0.00 3.02
263 264 9.042008 CGACCTATTAGCTTGTGTAATGTTATT 57.958 33.333 0.00 0.00 0.00 1.40
264 265 8.418662 TCGACCTATTAGCTTGTGTAATGTTAT 58.581 33.333 0.00 0.00 0.00 1.89
265 266 7.774134 TCGACCTATTAGCTTGTGTAATGTTA 58.226 34.615 0.00 0.00 0.00 2.41
266 267 6.636705 TCGACCTATTAGCTTGTGTAATGTT 58.363 36.000 0.00 0.00 0.00 2.71
267 268 6.216801 TCGACCTATTAGCTTGTGTAATGT 57.783 37.500 0.00 0.00 0.00 2.71
268 269 7.534085 TTTCGACCTATTAGCTTGTGTAATG 57.466 36.000 0.00 0.00 0.00 1.90
269 270 7.065443 GGTTTTCGACCTATTAGCTTGTGTAAT 59.935 37.037 0.00 0.00 45.55 1.89
270 271 6.369615 GGTTTTCGACCTATTAGCTTGTGTAA 59.630 38.462 0.00 0.00 45.55 2.41
271 272 5.870978 GGTTTTCGACCTATTAGCTTGTGTA 59.129 40.000 0.00 0.00 45.55 2.90
272 273 4.694037 GGTTTTCGACCTATTAGCTTGTGT 59.306 41.667 0.00 0.00 45.55 3.72
273 274 5.217895 GGTTTTCGACCTATTAGCTTGTG 57.782 43.478 0.00 0.00 45.55 3.33
286 287 1.595794 TCGTTCTTGCTGGTTTTCGAC 59.404 47.619 0.00 0.00 0.00 4.20
287 288 1.595794 GTCGTTCTTGCTGGTTTTCGA 59.404 47.619 0.00 0.00 0.00 3.71
288 289 1.329292 TGTCGTTCTTGCTGGTTTTCG 59.671 47.619 0.00 0.00 0.00 3.46
289 290 2.612212 TCTGTCGTTCTTGCTGGTTTTC 59.388 45.455 0.00 0.00 0.00 2.29
290 291 2.639065 TCTGTCGTTCTTGCTGGTTTT 58.361 42.857 0.00 0.00 0.00 2.43
291 292 2.325583 TCTGTCGTTCTTGCTGGTTT 57.674 45.000 0.00 0.00 0.00 3.27
292 293 2.325583 TTCTGTCGTTCTTGCTGGTT 57.674 45.000 0.00 0.00 0.00 3.67
293 294 1.940613 GTTTCTGTCGTTCTTGCTGGT 59.059 47.619 0.00 0.00 0.00 4.00
294 295 1.264288 GGTTTCTGTCGTTCTTGCTGG 59.736 52.381 0.00 0.00 0.00 4.85
295 296 1.939934 TGGTTTCTGTCGTTCTTGCTG 59.060 47.619 0.00 0.00 0.00 4.41
296 297 2.213499 CTGGTTTCTGTCGTTCTTGCT 58.787 47.619 0.00 0.00 0.00 3.91
297 298 1.334149 GCTGGTTTCTGTCGTTCTTGC 60.334 52.381 0.00 0.00 0.00 4.01
298 299 2.213499 AGCTGGTTTCTGTCGTTCTTG 58.787 47.619 0.00 0.00 0.00 3.02
299 300 2.622064 AGCTGGTTTCTGTCGTTCTT 57.378 45.000 0.00 0.00 0.00 2.52
300 301 2.103263 AGAAGCTGGTTTCTGTCGTTCT 59.897 45.455 0.00 0.00 36.12 3.01
301 302 2.484889 AGAAGCTGGTTTCTGTCGTTC 58.515 47.619 0.00 0.00 36.12 3.95
302 303 2.622064 AGAAGCTGGTTTCTGTCGTT 57.378 45.000 0.00 0.00 36.12 3.85
303 304 2.622064 AAGAAGCTGGTTTCTGTCGT 57.378 45.000 0.76 0.00 37.48 4.34
304 305 4.670221 GCATAAAGAAGCTGGTTTCTGTCG 60.670 45.833 0.76 0.00 37.48 4.35
305 306 4.216257 TGCATAAAGAAGCTGGTTTCTGTC 59.784 41.667 0.76 0.00 37.48 3.51
306 307 4.144297 TGCATAAAGAAGCTGGTTTCTGT 58.856 39.130 0.76 0.00 37.48 3.41
307 308 4.771590 TGCATAAAGAAGCTGGTTTCTG 57.228 40.909 0.76 0.00 37.48 3.02
308 309 4.584325 TGTTGCATAAAGAAGCTGGTTTCT 59.416 37.500 0.00 0.00 39.03 2.52
309 310 4.681483 GTGTTGCATAAAGAAGCTGGTTTC 59.319 41.667 0.00 0.00 0.00 2.78
310 311 4.342092 AGTGTTGCATAAAGAAGCTGGTTT 59.658 37.500 0.00 0.00 0.00 3.27
311 312 3.891366 AGTGTTGCATAAAGAAGCTGGTT 59.109 39.130 0.00 0.00 0.00 3.67
312 313 3.254166 CAGTGTTGCATAAAGAAGCTGGT 59.746 43.478 0.00 0.00 0.00 4.00
313 314 3.254166 ACAGTGTTGCATAAAGAAGCTGG 59.746 43.478 0.00 0.00 0.00 4.85
314 315 4.470462 GACAGTGTTGCATAAAGAAGCTG 58.530 43.478 0.00 0.00 0.00 4.24
315 316 3.503748 GGACAGTGTTGCATAAAGAAGCT 59.496 43.478 0.00 0.00 0.00 3.74
316 317 3.366374 GGGACAGTGTTGCATAAAGAAGC 60.366 47.826 0.00 0.00 0.00 3.86
317 318 3.191371 GGGGACAGTGTTGCATAAAGAAG 59.809 47.826 0.00 0.00 0.00 2.85
318 319 3.153919 GGGGACAGTGTTGCATAAAGAA 58.846 45.455 0.00 0.00 0.00 2.52
319 320 2.107378 TGGGGACAGTGTTGCATAAAGA 59.893 45.455 0.00 0.00 35.01 2.52
320 321 2.513753 TGGGGACAGTGTTGCATAAAG 58.486 47.619 0.00 0.00 35.01 1.85
321 322 2.666272 TGGGGACAGTGTTGCATAAA 57.334 45.000 0.00 0.00 35.01 1.40
326 327 1.358759 CGTTTGGGGACAGTGTTGC 59.641 57.895 0.00 0.00 44.54 4.17
424 426 2.290287 CCACGATCTGGTCCACCCA 61.290 63.158 0.00 0.00 42.51 4.51
472 474 1.480212 ATCCAAGGGCTCACACGTCA 61.480 55.000 0.00 0.00 0.00 4.35
507 509 3.225104 TCAAGCATCAGCCACTTCTTTT 58.775 40.909 0.00 0.00 43.56 2.27
867 923 1.842381 GAGTGGGGGAGGGACACAAG 61.842 65.000 0.00 0.00 37.58 3.16
868 924 1.846124 GAGTGGGGGAGGGACACAA 60.846 63.158 0.00 0.00 37.58 3.33
1474 4392 4.922026 GCCGTCCGTGGTGTTGGT 62.922 66.667 0.00 0.00 0.00 3.67
2962 5935 3.495434 ACGTTGTGTCCCCAATTCTTA 57.505 42.857 0.00 0.00 0.00 2.10
2981 5954 3.994392 CGTACCATAGGCCATGTATGAAC 59.006 47.826 5.01 5.81 32.21 3.18
3029 6002 2.052590 CGGACAACCAAACACGCG 60.053 61.111 3.53 3.53 35.59 6.01
3191 6164 7.594015 GCATCTTTTTCATGCAGATATTACCTG 59.406 37.037 0.00 0.00 45.19 4.00
3203 6176 2.162208 TCGAGGTGCATCTTTTTCATGC 59.838 45.455 0.00 0.00 45.92 4.06
3243 6216 4.937620 TCTACTAGTGTACAAACCGATCGT 59.062 41.667 15.09 0.00 0.00 3.73
3257 6230 3.713826 TTGCCCCCTTTTCTACTAGTG 57.286 47.619 5.39 0.00 0.00 2.74
3258 6231 3.053619 CCATTGCCCCCTTTTCTACTAGT 60.054 47.826 0.00 0.00 0.00 2.57
3259 6232 3.053619 ACCATTGCCCCCTTTTCTACTAG 60.054 47.826 0.00 0.00 0.00 2.57
3260 6233 2.923629 ACCATTGCCCCCTTTTCTACTA 59.076 45.455 0.00 0.00 0.00 1.82
3261 6234 1.716503 ACCATTGCCCCCTTTTCTACT 59.283 47.619 0.00 0.00 0.00 2.57
3262 6235 2.100197 GACCATTGCCCCCTTTTCTAC 58.900 52.381 0.00 0.00 0.00 2.59
3263 6236 1.006639 GGACCATTGCCCCCTTTTCTA 59.993 52.381 0.00 0.00 0.00 2.10
3264 6237 0.252239 GGACCATTGCCCCCTTTTCT 60.252 55.000 0.00 0.00 0.00 2.52
3265 6238 0.544120 TGGACCATTGCCCCCTTTTC 60.544 55.000 0.00 0.00 0.00 2.29
3266 6239 0.545071 CTGGACCATTGCCCCCTTTT 60.545 55.000 0.00 0.00 0.00 2.27
3267 6240 1.079073 CTGGACCATTGCCCCCTTT 59.921 57.895 0.00 0.00 0.00 3.11
3268 6241 2.772924 CTGGACCATTGCCCCCTT 59.227 61.111 0.00 0.00 0.00 3.95
3269 6242 3.350163 CCTGGACCATTGCCCCCT 61.350 66.667 0.00 0.00 0.00 4.79
3275 6248 3.995506 GACCCGGCCTGGACCATTG 62.996 68.421 21.63 2.26 42.00 2.82
3276 6249 3.728373 GACCCGGCCTGGACCATT 61.728 66.667 21.63 0.00 42.00 3.16
3290 6263 1.146263 CGGGACTAATGGGCTGACC 59.854 63.158 0.00 0.00 40.81 4.02
3291 6264 1.146263 CCGGGACTAATGGGCTGAC 59.854 63.158 0.00 0.00 0.00 3.51
3292 6265 0.912487 AACCGGGACTAATGGGCTGA 60.912 55.000 6.32 0.00 0.00 4.26
3293 6266 0.463833 GAACCGGGACTAATGGGCTG 60.464 60.000 6.32 0.00 0.00 4.85
3294 6267 0.912487 TGAACCGGGACTAATGGGCT 60.912 55.000 6.32 0.00 0.00 5.19
3295 6268 0.034863 TTGAACCGGGACTAATGGGC 60.035 55.000 6.32 0.00 0.00 5.36
3296 6269 2.572290 GATTGAACCGGGACTAATGGG 58.428 52.381 6.32 0.00 0.00 4.00
3297 6270 2.092646 TGGATTGAACCGGGACTAATGG 60.093 50.000 6.32 0.00 0.00 3.16
3298 6271 3.118408 TCTGGATTGAACCGGGACTAATG 60.118 47.826 6.32 0.00 36.97 1.90
3299 6272 3.112263 TCTGGATTGAACCGGGACTAAT 58.888 45.455 6.32 0.27 36.97 1.73
3300 6273 2.542550 TCTGGATTGAACCGGGACTAA 58.457 47.619 6.32 0.00 36.97 2.24
3301 6274 2.235402 GTTCTGGATTGAACCGGGACTA 59.765 50.000 6.32 0.00 40.62 2.59
3302 6275 1.003233 GTTCTGGATTGAACCGGGACT 59.997 52.381 6.32 0.00 40.62 3.85
3303 6276 1.450025 GTTCTGGATTGAACCGGGAC 58.550 55.000 6.32 0.00 40.10 4.46
3304 6277 3.948735 GTTCTGGATTGAACCGGGA 57.051 52.632 6.32 0.00 40.10 5.14
3309 6282 1.450025 GTCCCGGTTCTGGATTGAAC 58.550 55.000 0.00 0.00 43.88 3.18
3310 6283 0.326927 GGTCCCGGTTCTGGATTGAA 59.673 55.000 0.00 0.00 33.65 2.69
3311 6284 0.838554 TGGTCCCGGTTCTGGATTGA 60.839 55.000 0.00 0.00 33.65 2.57
3312 6285 0.037590 TTGGTCCCGGTTCTGGATTG 59.962 55.000 0.00 0.00 33.65 2.67
3313 6286 0.999712 ATTGGTCCCGGTTCTGGATT 59.000 50.000 0.00 0.00 33.65 3.01
3314 6287 0.255890 CATTGGTCCCGGTTCTGGAT 59.744 55.000 0.00 0.00 33.65 3.41
3315 6288 1.682849 CATTGGTCCCGGTTCTGGA 59.317 57.895 0.00 0.00 0.00 3.86
3316 6289 1.378514 CCATTGGTCCCGGTTCTGG 60.379 63.158 0.00 0.00 0.00 3.86
3317 6290 1.378514 CCCATTGGTCCCGGTTCTG 60.379 63.158 0.00 0.00 0.00 3.02
3318 6291 2.612493 CCCCATTGGTCCCGGTTCT 61.612 63.158 0.00 0.00 0.00 3.01
3319 6292 2.044352 CCCCATTGGTCCCGGTTC 60.044 66.667 0.00 0.00 0.00 3.62
3320 6293 3.668142 CCCCCATTGGTCCCGGTT 61.668 66.667 0.00 0.00 0.00 4.44
3323 6296 3.677480 AATGCCCCCATTGGTCCCG 62.677 63.158 1.20 0.00 40.09 5.14
3324 6297 2.368188 AATGCCCCCATTGGTCCC 59.632 61.111 1.20 0.00 40.09 4.46
3330 6303 2.368188 GGGTCCAATGCCCCCATT 59.632 61.111 1.18 0.00 42.26 3.16
3331 6304 4.141876 CGGGTCCAATGCCCCCAT 62.142 66.667 6.32 0.00 43.18 4.00
3334 6307 4.376170 AACCGGGTCCAATGCCCC 62.376 66.667 6.32 0.00 43.18 5.80
3335 6308 2.754254 GAACCGGGTCCAATGCCC 60.754 66.667 8.85 0.00 42.68 5.36
3336 6309 3.131478 CGAACCGGGTCCAATGCC 61.131 66.667 15.47 0.00 0.00 4.40
3337 6310 2.359478 ACGAACCGGGTCCAATGC 60.359 61.111 15.47 0.00 0.00 3.56
3338 6311 1.004320 TCACGAACCGGGTCCAATG 60.004 57.895 15.47 10.37 0.00 2.82
3339 6312 1.295423 CTCACGAACCGGGTCCAAT 59.705 57.895 15.47 0.00 0.00 3.16
3340 6313 2.738480 CTCACGAACCGGGTCCAA 59.262 61.111 15.47 0.00 0.00 3.53
3341 6314 3.998672 GCTCACGAACCGGGTCCA 61.999 66.667 15.47 0.00 0.00 4.02
3342 6315 4.754667 GGCTCACGAACCGGGTCC 62.755 72.222 15.47 0.00 0.00 4.46
3343 6316 4.754667 GGGCTCACGAACCGGGTC 62.755 72.222 10.31 10.31 0.00 4.46
3376 6349 3.061848 GACCAATGGCCCACGTGG 61.062 66.667 28.26 28.26 37.09 4.94
3377 6350 3.061848 GGACCAATGGCCCACGTG 61.062 66.667 9.08 9.08 0.00 4.49
3378 6351 3.256960 AGGACCAATGGCCCACGT 61.257 61.111 7.53 0.00 0.00 4.49
3379 6352 2.751436 CAGGACCAATGGCCCACG 60.751 66.667 7.53 0.00 0.00 4.94
3380 6353 2.362889 CCAGGACCAATGGCCCAC 60.363 66.667 7.53 0.00 0.00 4.61
3381 6354 2.439553 GAACCAGGACCAATGGCCCA 62.440 60.000 7.53 0.00 41.87 5.36
3382 6355 1.682344 GAACCAGGACCAATGGCCC 60.682 63.158 0.00 0.00 41.87 5.80
3383 6356 2.046285 CGAACCAGGACCAATGGCC 61.046 63.158 0.00 0.00 41.87 5.36
3384 6357 1.303317 ACGAACCAGGACCAATGGC 60.303 57.895 0.00 0.00 41.87 4.40
3385 6358 0.324943 AGACGAACCAGGACCAATGG 59.675 55.000 0.00 0.00 43.87 3.16
3386 6359 1.442769 CAGACGAACCAGGACCAATG 58.557 55.000 0.00 0.00 0.00 2.82
3387 6360 0.324943 CCAGACGAACCAGGACCAAT 59.675 55.000 0.00 0.00 0.00 3.16
3388 6361 0.761323 TCCAGACGAACCAGGACCAA 60.761 55.000 0.00 0.00 0.00 3.67
3389 6362 1.152419 TCCAGACGAACCAGGACCA 60.152 57.895 0.00 0.00 0.00 4.02
3390 6363 1.292541 GTCCAGACGAACCAGGACC 59.707 63.158 0.00 0.00 43.67 4.46
3391 6364 4.990288 GTCCAGACGAACCAGGAC 57.010 61.111 0.00 0.00 43.18 3.85
3392 6365 0.471211 AAGGTCCAGACGAACCAGGA 60.471 55.000 0.00 0.00 38.06 3.86
3393 6366 0.396811 AAAGGTCCAGACGAACCAGG 59.603 55.000 0.00 0.00 38.06 4.45
3394 6367 1.873591 CAAAAGGTCCAGACGAACCAG 59.126 52.381 0.00 0.00 38.06 4.00
3395 6368 1.476110 CCAAAAGGTCCAGACGAACCA 60.476 52.381 0.00 0.00 38.06 3.67
3396 6369 1.235724 CCAAAAGGTCCAGACGAACC 58.764 55.000 0.00 0.00 35.69 3.62
3397 6370 1.871676 GACCAAAAGGTCCAGACGAAC 59.128 52.381 3.27 0.00 33.21 3.95
3398 6371 2.249844 GACCAAAAGGTCCAGACGAA 57.750 50.000 3.27 0.00 33.21 3.85
3406 6379 1.176619 CCAACCGGGACCAAAAGGTC 61.177 60.000 6.32 6.11 40.01 3.85
3407 6380 1.152631 CCAACCGGGACCAAAAGGT 60.153 57.895 6.32 0.00 40.01 3.50
3408 6381 1.152631 ACCAACCGGGACCAAAAGG 60.153 57.895 6.32 0.00 41.15 3.11
3409 6382 1.460273 CCACCAACCGGGACCAAAAG 61.460 60.000 6.32 0.00 41.15 2.27
3410 6383 1.455959 CCACCAACCGGGACCAAAA 60.456 57.895 6.32 0.00 41.15 2.44
3411 6384 2.196229 CCACCAACCGGGACCAAA 59.804 61.111 6.32 0.00 41.15 3.28
3417 6390 3.943691 TTCGTCCCACCAACCGGG 61.944 66.667 6.32 0.00 46.03 5.73
3418 6391 2.667199 GTTCGTCCCACCAACCGG 60.667 66.667 0.00 0.00 38.77 5.28
3419 6392 2.667199 GGTTCGTCCCACCAACCG 60.667 66.667 0.00 0.00 34.04 4.44
3420 6393 2.667199 CGGTTCGTCCCACCAACC 60.667 66.667 0.00 0.00 36.91 3.77
3421 6394 2.667199 CCGGTTCGTCCCACCAAC 60.667 66.667 0.00 0.00 33.36 3.77
3422 6395 3.943691 CCCGGTTCGTCCCACCAA 61.944 66.667 0.00 0.00 33.36 3.67
3423 6396 4.938074 TCCCGGTTCGTCCCACCA 62.938 66.667 0.00 0.00 33.36 4.17
3424 6397 4.383861 GTCCCGGTTCGTCCCACC 62.384 72.222 0.00 0.00 0.00 4.61
3425 6398 4.383861 GGTCCCGGTTCGTCCCAC 62.384 72.222 0.00 0.00 0.00 4.61
3426 6399 4.938074 TGGTCCCGGTTCGTCCCA 62.938 66.667 0.00 0.00 0.00 4.37
3427 6400 2.963101 ATTGGTCCCGGTTCGTCCC 61.963 63.158 0.00 0.00 0.00 4.46
3428 6401 1.743995 CATTGGTCCCGGTTCGTCC 60.744 63.158 0.00 0.00 0.00 4.79
3429 6402 1.004200 ACATTGGTCCCGGTTCGTC 60.004 57.895 0.00 0.00 0.00 4.20
3430 6403 1.302192 CACATTGGTCCCGGTTCGT 60.302 57.895 0.00 0.00 0.00 3.85
3431 6404 2.686816 GCACATTGGTCCCGGTTCG 61.687 63.158 0.00 0.00 0.00 3.95
3432 6405 2.340328 GGCACATTGGTCCCGGTTC 61.340 63.158 0.00 0.00 0.00 3.62
3433 6406 2.282887 GGCACATTGGTCCCGGTT 60.283 61.111 0.00 0.00 0.00 4.44
3434 6407 2.840753 AAGGCACATTGGTCCCGGT 61.841 57.895 0.00 0.00 0.00 5.28
3435 6408 2.035626 AAGGCACATTGGTCCCGG 59.964 61.111 0.00 0.00 0.00 5.73
3436 6409 2.342650 CCAAGGCACATTGGTCCCG 61.343 63.158 5.92 0.00 44.01 5.14
3437 6410 3.698765 CCAAGGCACATTGGTCCC 58.301 61.111 5.92 0.00 44.01 4.46
3442 6415 2.269978 CCAGGACCAAGGCACATTG 58.730 57.895 0.00 0.00 0.00 2.82
3443 6416 4.850193 CCAGGACCAAGGCACATT 57.150 55.556 0.00 0.00 0.00 2.71
3449 6422 4.366684 GGTGGGCCAGGACCAAGG 62.367 72.222 18.96 0.00 45.35 3.61
3450 6423 3.579302 TGGTGGGCCAGGACCAAG 61.579 66.667 18.96 0.00 45.35 3.61
3451 6424 3.897122 GTGGTGGGCCAGGACCAA 61.897 66.667 18.96 0.00 45.35 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.