Multiple sequence alignment - TraesCS3B01G477800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G477800 chr3B 100.000 2445 0 0 1 2445 726468914 726466470 0.000000e+00 4516
1 TraesCS3B01G477800 chr3B 95.198 354 13 4 2094 2445 653042577 653042226 7.640000e-155 556
2 TraesCS3B01G477800 chr4B 96.649 1850 58 1 254 2099 657892207 657890358 0.000000e+00 3070
3 TraesCS3B01G477800 chr4B 96.272 1851 63 3 253 2099 657862246 657864094 0.000000e+00 3031
4 TraesCS3B01G477800 chr4B 91.288 264 11 3 1 252 364050115 364049852 1.390000e-92 350
5 TraesCS3B01G477800 chr4A 96.354 1865 62 3 239 2099 696704938 696706800 0.000000e+00 3062
6 TraesCS3B01G477800 chr7B 96.541 1850 60 1 254 2099 57039156 57037307 0.000000e+00 3059
7 TraesCS3B01G477800 chr7B 96.541 1850 59 2 254 2099 604018859 604017011 0.000000e+00 3057
8 TraesCS3B01G477800 chr2B 96.542 1851 58 3 254 2099 32122511 32120662 0.000000e+00 3059
9 TraesCS3B01G477800 chr6B 96.216 1850 65 2 254 2099 692049651 692047803 0.000000e+00 3024
10 TraesCS3B01G477800 chr1B 96.216 1850 65 2 254 2099 62999182 62997334 0.000000e+00 3024
11 TraesCS3B01G477800 chr1B 96.848 349 9 2 2099 2445 43792369 43792021 1.260000e-162 582
12 TraesCS3B01G477800 chr5B 96.218 1851 60 4 254 2099 676854100 676852255 0.000000e+00 3022
13 TraesCS3B01G477800 chr5B 90.503 358 22 10 2093 2445 442449651 442449301 1.710000e-126 462
14 TraesCS3B01G477800 chr5B 90.909 264 12 4 1 252 468830865 468831128 6.470000e-91 344
15 TraesCS3B01G477800 chr4D 96.848 349 7 3 2099 2445 279377697 279377351 4.530000e-162 580
16 TraesCS3B01G477800 chr4D 95.702 349 11 3 2099 2445 279382937 279382591 2.120000e-155 558
17 TraesCS3B01G477800 chr1D 96.000 350 10 3 2098 2445 495023320 495023667 1.270000e-157 566
18 TraesCS3B01G477800 chr5A 91.850 319 18 5 2099 2415 70950539 70950851 2.890000e-119 438
19 TraesCS3B01G477800 chr5A 91.536 319 19 5 2099 2415 71387439 71387751 1.340000e-117 433
20 TraesCS3B01G477800 chrUn 89.583 336 25 7 2099 2430 105269026 105269355 3.760000e-113 418
21 TraesCS3B01G477800 chrUn 92.181 243 11 2 1 235 478453220 478453462 1.080000e-88 337
22 TraesCS3B01G477800 chrUn 90.000 100 8 2 2 100 138347117 138347019 7.100000e-26 128
23 TraesCS3B01G477800 chrUn 90.000 100 8 2 2 100 138416830 138416732 7.100000e-26 128
24 TraesCS3B01G477800 chrUn 90.000 100 8 2 2 100 138485896 138485798 7.100000e-26 128
25 TraesCS3B01G477800 chrUn 90.000 100 8 2 2 100 171111434 171111532 7.100000e-26 128
26 TraesCS3B01G477800 chr2A 88.973 263 17 6 1 251 693380474 693380212 5.080000e-82 315
27 TraesCS3B01G477800 chr5D 85.609 271 18 9 2 253 43195060 43195328 5.180000e-67 265


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G477800 chr3B 726466470 726468914 2444 True 4516 4516 100.000 1 2445 1 chr3B.!!$R2 2444
1 TraesCS3B01G477800 chr4B 657890358 657892207 1849 True 3070 3070 96.649 254 2099 1 chr4B.!!$R2 1845
2 TraesCS3B01G477800 chr4B 657862246 657864094 1848 False 3031 3031 96.272 253 2099 1 chr4B.!!$F1 1846
3 TraesCS3B01G477800 chr4A 696704938 696706800 1862 False 3062 3062 96.354 239 2099 1 chr4A.!!$F1 1860
4 TraesCS3B01G477800 chr7B 57037307 57039156 1849 True 3059 3059 96.541 254 2099 1 chr7B.!!$R1 1845
5 TraesCS3B01G477800 chr7B 604017011 604018859 1848 True 3057 3057 96.541 254 2099 1 chr7B.!!$R2 1845
6 TraesCS3B01G477800 chr2B 32120662 32122511 1849 True 3059 3059 96.542 254 2099 1 chr2B.!!$R1 1845
7 TraesCS3B01G477800 chr6B 692047803 692049651 1848 True 3024 3024 96.216 254 2099 1 chr6B.!!$R1 1845
8 TraesCS3B01G477800 chr1B 62997334 62999182 1848 True 3024 3024 96.216 254 2099 1 chr1B.!!$R2 1845
9 TraesCS3B01G477800 chr5B 676852255 676854100 1845 True 3022 3022 96.218 254 2099 1 chr5B.!!$R2 1845

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.031917 TCCAGGCTCCGTGGGTAATA 60.032 55.0 4.35 0.0 35.58 0.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1879 1886 1.164411 TAGCTTGTTCCCACATTGCG 58.836 50.0 0.0 0.0 37.63 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.363795 CTCCAGGCTCCGTGGGTA 60.364 66.667 4.35 0.00 35.58 3.69
21 22 1.987855 CTCCAGGCTCCGTGGGTAA 60.988 63.158 4.35 0.00 35.58 2.85
22 23 1.306654 TCCAGGCTCCGTGGGTAAT 60.307 57.895 4.35 0.00 35.58 1.89
23 24 0.031917 TCCAGGCTCCGTGGGTAATA 60.032 55.000 4.35 0.00 35.58 0.98
24 25 0.106149 CCAGGCTCCGTGGGTAATAC 59.894 60.000 0.00 0.00 0.00 1.89
25 26 0.828022 CAGGCTCCGTGGGTAATACA 59.172 55.000 0.00 0.00 0.00 2.29
26 27 1.208535 CAGGCTCCGTGGGTAATACAA 59.791 52.381 0.00 0.00 0.00 2.41
27 28 1.208776 AGGCTCCGTGGGTAATACAAC 59.791 52.381 0.00 0.00 0.00 3.32
28 29 1.208776 GGCTCCGTGGGTAATACAACT 59.791 52.381 0.00 0.00 0.00 3.16
29 30 2.277084 GCTCCGTGGGTAATACAACTG 58.723 52.381 0.00 0.00 0.00 3.16
30 31 2.901249 CTCCGTGGGTAATACAACTGG 58.099 52.381 0.00 0.00 0.00 4.00
31 32 2.498481 CTCCGTGGGTAATACAACTGGA 59.502 50.000 0.00 2.01 0.00 3.86
32 33 3.109151 TCCGTGGGTAATACAACTGGAT 58.891 45.455 0.00 0.00 0.00 3.41
33 34 3.133362 TCCGTGGGTAATACAACTGGATC 59.867 47.826 0.00 0.00 0.00 3.36
34 35 3.134081 CCGTGGGTAATACAACTGGATCT 59.866 47.826 0.00 0.00 0.00 2.75
35 36 4.342951 CCGTGGGTAATACAACTGGATCTA 59.657 45.833 0.00 0.00 0.00 1.98
36 37 5.011738 CCGTGGGTAATACAACTGGATCTAT 59.988 44.000 0.00 0.00 0.00 1.98
37 38 6.463897 CCGTGGGTAATACAACTGGATCTATT 60.464 42.308 0.00 0.00 0.00 1.73
38 39 6.423905 CGTGGGTAATACAACTGGATCTATTG 59.576 42.308 0.00 0.00 0.00 1.90
39 40 7.506114 GTGGGTAATACAACTGGATCTATTGA 58.494 38.462 9.98 0.00 0.00 2.57
40 41 7.441458 GTGGGTAATACAACTGGATCTATTGAC 59.559 40.741 9.98 0.63 0.00 3.18
41 42 7.126573 TGGGTAATACAACTGGATCTATTGACA 59.873 37.037 9.98 0.00 0.00 3.58
42 43 7.441458 GGGTAATACAACTGGATCTATTGACAC 59.559 40.741 9.98 0.00 0.00 3.67
43 44 7.441458 GGTAATACAACTGGATCTATTGACACC 59.559 40.741 9.98 7.64 0.00 4.16
44 45 4.222124 ACAACTGGATCTATTGACACCC 57.778 45.455 9.98 0.00 0.00 4.61
45 46 3.587061 ACAACTGGATCTATTGACACCCA 59.413 43.478 9.98 0.00 0.00 4.51
46 47 4.042809 ACAACTGGATCTATTGACACCCAA 59.957 41.667 9.98 0.00 39.41 4.12
47 48 4.927267 ACTGGATCTATTGACACCCAAA 57.073 40.909 0.00 0.00 38.43 3.28
48 49 5.255397 ACTGGATCTATTGACACCCAAAA 57.745 39.130 0.00 0.00 38.43 2.44
49 50 5.640147 ACTGGATCTATTGACACCCAAAAA 58.360 37.500 0.00 0.00 38.43 1.94
50 51 5.476945 ACTGGATCTATTGACACCCAAAAAC 59.523 40.000 0.00 0.00 38.43 2.43
51 52 5.389520 TGGATCTATTGACACCCAAAAACA 58.610 37.500 0.00 0.00 38.43 2.83
52 53 5.835819 TGGATCTATTGACACCCAAAAACAA 59.164 36.000 0.00 0.00 38.43 2.83
53 54 6.496565 TGGATCTATTGACACCCAAAAACAAT 59.503 34.615 0.00 0.00 38.43 2.71
54 55 7.671819 TGGATCTATTGACACCCAAAAACAATA 59.328 33.333 0.00 0.00 38.43 1.90
55 56 8.190784 GGATCTATTGACACCCAAAAACAATAG 58.809 37.037 1.90 1.90 45.18 1.73
59 60 9.410556 CTATTGACACCCAAAAACAATAGAAAG 57.589 33.333 15.56 0.00 45.95 2.62
60 61 6.783708 TGACACCCAAAAACAATAGAAAGT 57.216 33.333 0.00 0.00 0.00 2.66
61 62 7.176589 TGACACCCAAAAACAATAGAAAGTT 57.823 32.000 0.00 0.00 0.00 2.66
62 63 7.616313 TGACACCCAAAAACAATAGAAAGTTT 58.384 30.769 0.00 0.00 39.46 2.66
63 64 8.750298 TGACACCCAAAAACAATAGAAAGTTTA 58.250 29.630 0.00 0.00 36.98 2.01
64 65 9.244799 GACACCCAAAAACAATAGAAAGTTTAG 57.755 33.333 0.00 0.00 36.98 1.85
65 66 8.755028 ACACCCAAAAACAATAGAAAGTTTAGT 58.245 29.630 0.00 0.00 36.98 2.24
66 67 9.244799 CACCCAAAAACAATAGAAAGTTTAGTC 57.755 33.333 0.00 0.00 36.98 2.59
67 68 8.973182 ACCCAAAAACAATAGAAAGTTTAGTCA 58.027 29.630 0.00 0.00 36.98 3.41
68 69 9.463443 CCCAAAAACAATAGAAAGTTTAGTCAG 57.537 33.333 0.00 0.00 36.98 3.51
78 79 7.118422 AGAAAGTTTAGTCAGTTACATTCGC 57.882 36.000 0.00 0.00 0.00 4.70
79 80 6.929606 AGAAAGTTTAGTCAGTTACATTCGCT 59.070 34.615 0.00 0.00 0.00 4.93
80 81 8.086522 AGAAAGTTTAGTCAGTTACATTCGCTA 58.913 33.333 0.00 0.00 0.00 4.26
81 82 8.597662 AAAGTTTAGTCAGTTACATTCGCTAA 57.402 30.769 0.00 0.00 0.00 3.09
82 83 7.813852 AGTTTAGTCAGTTACATTCGCTAAG 57.186 36.000 0.00 0.00 0.00 2.18
83 84 6.310711 AGTTTAGTCAGTTACATTCGCTAAGC 59.689 38.462 0.00 0.00 0.00 3.09
84 85 4.188247 AGTCAGTTACATTCGCTAAGCA 57.812 40.909 0.00 0.00 0.00 3.91
85 86 3.927142 AGTCAGTTACATTCGCTAAGCAC 59.073 43.478 0.00 0.00 0.00 4.40
86 87 3.678072 GTCAGTTACATTCGCTAAGCACA 59.322 43.478 0.00 0.00 0.00 4.57
87 88 4.151689 GTCAGTTACATTCGCTAAGCACAA 59.848 41.667 0.00 0.00 0.00 3.33
88 89 4.752604 TCAGTTACATTCGCTAAGCACAAA 59.247 37.500 0.00 0.00 0.00 2.83
89 90 5.082059 CAGTTACATTCGCTAAGCACAAAG 58.918 41.667 0.00 0.00 0.00 2.77
90 91 4.154195 AGTTACATTCGCTAAGCACAAAGG 59.846 41.667 0.00 0.00 0.00 3.11
91 92 2.778299 ACATTCGCTAAGCACAAAGGA 58.222 42.857 0.00 0.00 0.00 3.36
92 93 3.146066 ACATTCGCTAAGCACAAAGGAA 58.854 40.909 0.00 0.00 0.00 3.36
93 94 3.568007 ACATTCGCTAAGCACAAAGGAAA 59.432 39.130 0.00 0.00 0.00 3.13
94 95 3.896648 TTCGCTAAGCACAAAGGAAAG 57.103 42.857 0.00 0.00 0.00 2.62
95 96 3.120321 TCGCTAAGCACAAAGGAAAGA 57.880 42.857 0.00 0.00 0.00 2.52
96 97 3.472652 TCGCTAAGCACAAAGGAAAGAA 58.527 40.909 0.00 0.00 0.00 2.52
97 98 3.880490 TCGCTAAGCACAAAGGAAAGAAA 59.120 39.130 0.00 0.00 0.00 2.52
98 99 4.024048 TCGCTAAGCACAAAGGAAAGAAAG 60.024 41.667 0.00 0.00 0.00 2.62
99 100 4.550422 GCTAAGCACAAAGGAAAGAAAGG 58.450 43.478 0.00 0.00 0.00 3.11
100 101 4.278419 GCTAAGCACAAAGGAAAGAAAGGA 59.722 41.667 0.00 0.00 0.00 3.36
101 102 5.047731 GCTAAGCACAAAGGAAAGAAAGGAT 60.048 40.000 0.00 0.00 0.00 3.24
102 103 4.861102 AGCACAAAGGAAAGAAAGGATG 57.139 40.909 0.00 0.00 0.00 3.51
103 104 3.006217 AGCACAAAGGAAAGAAAGGATGC 59.994 43.478 0.00 0.00 0.00 3.91
104 105 3.568538 CACAAAGGAAAGAAAGGATGCG 58.431 45.455 0.00 0.00 0.00 4.73
105 106 3.253188 CACAAAGGAAAGAAAGGATGCGA 59.747 43.478 0.00 0.00 0.00 5.10
106 107 3.888930 ACAAAGGAAAGAAAGGATGCGAA 59.111 39.130 0.00 0.00 0.00 4.70
107 108 4.022849 ACAAAGGAAAGAAAGGATGCGAAG 60.023 41.667 0.00 0.00 0.00 3.79
127 128 6.071463 CGAAGCGAATATGCATAAAACTACC 58.929 40.000 11.13 0.00 37.31 3.18
128 129 6.073765 CGAAGCGAATATGCATAAAACTACCT 60.074 38.462 11.13 0.00 37.31 3.08
129 130 7.115805 CGAAGCGAATATGCATAAAACTACCTA 59.884 37.037 11.13 0.00 37.31 3.08
130 131 8.671384 AAGCGAATATGCATAAAACTACCTAA 57.329 30.769 11.13 0.00 37.31 2.69
131 132 8.671384 AGCGAATATGCATAAAACTACCTAAA 57.329 30.769 11.13 0.00 37.31 1.85
132 133 9.284968 AGCGAATATGCATAAAACTACCTAAAT 57.715 29.630 11.13 0.00 37.31 1.40
133 134 9.893305 GCGAATATGCATAAAACTACCTAAATT 57.107 29.630 11.13 0.00 34.15 1.82
155 156 3.943671 TCCTAAGAGGAGAGAGACCTG 57.056 52.381 0.00 0.00 40.06 4.00
156 157 2.512056 TCCTAAGAGGAGAGAGACCTGG 59.488 54.545 0.00 0.00 40.06 4.45
157 158 2.512056 CCTAAGAGGAGAGAGACCTGGA 59.488 54.545 0.00 0.00 37.67 3.86
158 159 3.053245 CCTAAGAGGAGAGAGACCTGGAA 60.053 52.174 0.00 0.00 37.67 3.53
159 160 2.826674 AGAGGAGAGAGACCTGGAAG 57.173 55.000 0.00 0.00 37.93 3.46
160 161 2.283834 AGAGGAGAGAGACCTGGAAGA 58.716 52.381 0.00 0.00 37.93 2.87
161 162 2.858768 AGAGGAGAGAGACCTGGAAGAT 59.141 50.000 0.00 0.00 37.93 2.40
162 163 2.958355 GAGGAGAGAGACCTGGAAGATG 59.042 54.545 0.00 0.00 37.93 2.90
163 164 1.412343 GGAGAGAGACCTGGAAGATGC 59.588 57.143 0.00 0.00 34.07 3.91
164 165 2.387757 GAGAGAGACCTGGAAGATGCT 58.612 52.381 0.00 0.00 34.07 3.79
165 166 2.362077 GAGAGAGACCTGGAAGATGCTC 59.638 54.545 0.00 0.00 34.07 4.26
166 167 2.106566 GAGAGACCTGGAAGATGCTCA 58.893 52.381 0.00 0.00 34.07 4.26
167 168 2.499289 GAGAGACCTGGAAGATGCTCAA 59.501 50.000 0.00 0.00 34.07 3.02
168 169 3.113824 AGAGACCTGGAAGATGCTCAAT 58.886 45.455 0.00 0.00 34.07 2.57
169 170 3.118334 AGAGACCTGGAAGATGCTCAATG 60.118 47.826 0.00 0.00 34.07 2.82
170 171 1.674962 GACCTGGAAGATGCTCAATGC 59.325 52.381 0.00 0.00 38.21 3.56
183 184 3.968649 GCTCAATGCAAACTTGAACTCA 58.031 40.909 3.04 0.00 42.31 3.41
184 185 3.732721 GCTCAATGCAAACTTGAACTCAC 59.267 43.478 3.04 0.00 42.31 3.51
185 186 4.498682 GCTCAATGCAAACTTGAACTCACT 60.499 41.667 3.04 0.00 42.31 3.41
186 187 5.581126 TCAATGCAAACTTGAACTCACTT 57.419 34.783 0.00 0.00 29.96 3.16
187 188 6.691754 TCAATGCAAACTTGAACTCACTTA 57.308 33.333 0.00 0.00 29.96 2.24
188 189 6.728200 TCAATGCAAACTTGAACTCACTTAG 58.272 36.000 0.00 0.00 29.96 2.18
189 190 6.542005 TCAATGCAAACTTGAACTCACTTAGA 59.458 34.615 0.00 0.00 29.96 2.10
190 191 7.229306 TCAATGCAAACTTGAACTCACTTAGAT 59.771 33.333 0.00 0.00 29.96 1.98
191 192 6.942532 TGCAAACTTGAACTCACTTAGATT 57.057 33.333 0.00 0.00 0.00 2.40
192 193 7.333528 TGCAAACTTGAACTCACTTAGATTT 57.666 32.000 0.00 0.00 0.00 2.17
193 194 7.771183 TGCAAACTTGAACTCACTTAGATTTT 58.229 30.769 0.00 0.00 0.00 1.82
194 195 7.701924 TGCAAACTTGAACTCACTTAGATTTTG 59.298 33.333 0.00 0.00 0.00 2.44
195 196 7.702348 GCAAACTTGAACTCACTTAGATTTTGT 59.298 33.333 0.00 0.00 0.00 2.83
196 197 9.573133 CAAACTTGAACTCACTTAGATTTTGTT 57.427 29.630 0.00 0.00 0.00 2.83
197 198 9.573133 AAACTTGAACTCACTTAGATTTTGTTG 57.427 29.630 0.00 0.00 0.00 3.33
198 199 7.707104 ACTTGAACTCACTTAGATTTTGTTGG 58.293 34.615 0.00 0.00 0.00 3.77
199 200 7.556275 ACTTGAACTCACTTAGATTTTGTTGGA 59.444 33.333 0.00 0.00 0.00 3.53
200 201 7.259290 TGAACTCACTTAGATTTTGTTGGAC 57.741 36.000 0.00 0.00 0.00 4.02
201 202 7.054124 TGAACTCACTTAGATTTTGTTGGACT 58.946 34.615 0.00 0.00 0.00 3.85
202 203 6.867662 ACTCACTTAGATTTTGTTGGACTG 57.132 37.500 0.00 0.00 0.00 3.51
203 204 6.591935 ACTCACTTAGATTTTGTTGGACTGA 58.408 36.000 0.00 0.00 0.00 3.41
204 205 7.054124 ACTCACTTAGATTTTGTTGGACTGAA 58.946 34.615 0.00 0.00 0.00 3.02
205 206 7.556275 ACTCACTTAGATTTTGTTGGACTGAAA 59.444 33.333 0.00 0.00 0.00 2.69
206 207 8.287439 TCACTTAGATTTTGTTGGACTGAAAA 57.713 30.769 0.00 0.00 0.00 2.29
207 208 8.912988 TCACTTAGATTTTGTTGGACTGAAAAT 58.087 29.630 0.00 0.00 33.10 1.82
208 209 8.971321 CACTTAGATTTTGTTGGACTGAAAATG 58.029 33.333 0.00 0.00 31.10 2.32
209 210 8.912988 ACTTAGATTTTGTTGGACTGAAAATGA 58.087 29.630 0.00 0.00 31.10 2.57
210 211 9.918630 CTTAGATTTTGTTGGACTGAAAATGAT 57.081 29.630 0.00 0.00 31.10 2.45
213 214 8.859090 AGATTTTGTTGGACTGAAAATGATACA 58.141 29.630 0.00 0.00 31.10 2.29
214 215 9.132521 GATTTTGTTGGACTGAAAATGATACAG 57.867 33.333 0.00 0.00 37.62 2.74
215 216 7.815840 TTTGTTGGACTGAAAATGATACAGA 57.184 32.000 0.00 0.00 35.85 3.41
216 217 8.408043 TTTGTTGGACTGAAAATGATACAGAT 57.592 30.769 0.00 0.00 35.85 2.90
217 218 8.408043 TTGTTGGACTGAAAATGATACAGATT 57.592 30.769 0.00 0.00 35.85 2.40
218 219 8.044060 TGTTGGACTGAAAATGATACAGATTC 57.956 34.615 0.00 0.00 35.85 2.52
219 220 7.665145 TGTTGGACTGAAAATGATACAGATTCA 59.335 33.333 0.00 0.00 35.85 2.57
220 221 8.680903 GTTGGACTGAAAATGATACAGATTCAT 58.319 33.333 0.00 0.00 35.35 2.57
221 222 9.904198 TTGGACTGAAAATGATACAGATTCATA 57.096 29.630 0.00 0.00 33.52 2.15
341 342 0.251916 TCCATTAGTGCCGGTTCCAG 59.748 55.000 1.90 0.00 0.00 3.86
378 379 4.202121 GCTCTCATTAGTACCGGTTCATGA 60.202 45.833 15.04 12.95 0.00 3.07
380 381 4.707934 TCTCATTAGTACCGGTTCATGACA 59.292 41.667 15.04 0.00 0.00 3.58
392 393 4.261405 CGGTTCATGACAAACCTTTAGCAA 60.261 41.667 12.21 0.00 43.33 3.91
393 394 5.596845 GGTTCATGACAAACCTTTAGCAAA 58.403 37.500 7.67 0.00 42.42 3.68
473 474 1.549170 CCGTCCAGCACCTTTAGTACT 59.451 52.381 0.00 0.00 0.00 2.73
557 558 0.322546 CTGTTCTTCCCCTTTCCCCG 60.323 60.000 0.00 0.00 0.00 5.73
832 834 7.012610 GTGTGGTTTACTTAGTGCCTTCTAAAA 59.987 37.037 0.00 0.00 30.88 1.52
1019 1025 3.820557 CCATGGTTTTGATATCCGTCCT 58.179 45.455 2.57 0.00 0.00 3.85
1026 1032 0.179037 TGATATCCGTCCTCGTCGGT 60.179 55.000 0.00 0.00 46.86 4.69
1175 1182 4.784177 GGAAATTCCAACCGACCCTATTA 58.216 43.478 7.23 0.00 36.28 0.98
1374 1381 5.372343 AGTGTGGCTTGGTATCATTATGA 57.628 39.130 0.00 0.00 0.00 2.15
1425 1432 4.827304 TCTTGATCGCATTTGTTGTTGA 57.173 36.364 0.00 0.00 0.00 3.18
1585 1592 2.833582 GACCGATGCTCTCCCGGA 60.834 66.667 0.73 0.00 45.58 5.14
1711 1718 9.911788 AATTACTCTATGTCAAGAACCATTCAT 57.088 29.630 0.00 0.00 0.00 2.57
1766 1773 5.182950 CACTATAATGTTTGGACCAAGCACA 59.817 40.000 24.10 18.30 37.39 4.57
1837 1844 1.607225 TCTATCCTGGCCATGGGTTT 58.393 50.000 15.13 0.03 0.00 3.27
1879 1886 1.223211 GGAGGAAGAAGCTGAGCCC 59.777 63.158 0.00 0.00 0.00 5.19
1898 1905 1.164411 CGCAATGTGGGAACAAGCTA 58.836 50.000 0.00 0.00 46.06 3.32
1987 1994 2.813754 CGCAAGTGATTTGGAGAGGAAA 59.186 45.455 0.00 0.00 37.26 3.13
2031 2038 6.306987 AGGATCACAAGAAATTGTTGTACCT 58.693 36.000 8.20 13.28 35.93 3.08
2092 2099 0.251073 AATTGCTGCAATGGAAGGCC 59.749 50.000 26.87 0.00 34.04 5.19
2099 2106 1.211703 TGCAATGGAAGGCCGAGAATA 59.788 47.619 0.00 0.00 36.79 1.75
2100 2107 2.297701 GCAATGGAAGGCCGAGAATAA 58.702 47.619 0.00 0.00 36.79 1.40
2101 2108 2.291741 GCAATGGAAGGCCGAGAATAAG 59.708 50.000 0.00 0.00 36.79 1.73
2102 2109 2.880890 CAATGGAAGGCCGAGAATAAGG 59.119 50.000 0.00 0.00 36.79 2.69
2103 2110 1.874129 TGGAAGGCCGAGAATAAGGA 58.126 50.000 0.00 0.00 36.79 3.36
2104 2111 2.408565 TGGAAGGCCGAGAATAAGGAT 58.591 47.619 0.00 0.00 36.79 3.24
2105 2112 2.104792 TGGAAGGCCGAGAATAAGGATG 59.895 50.000 0.00 0.00 36.79 3.51
2106 2113 2.551071 GGAAGGCCGAGAATAAGGATGG 60.551 54.545 0.00 0.00 0.00 3.51
2107 2114 0.398318 AGGCCGAGAATAAGGATGGC 59.602 55.000 0.00 0.00 41.72 4.40
2108 2115 0.108585 GGCCGAGAATAAGGATGGCA 59.891 55.000 3.24 0.00 44.21 4.92
2109 2116 1.476833 GGCCGAGAATAAGGATGGCAA 60.477 52.381 3.24 0.00 44.21 4.52
2110 2117 2.508526 GCCGAGAATAAGGATGGCAAT 58.491 47.619 0.00 0.00 42.03 3.56
2111 2118 2.227388 GCCGAGAATAAGGATGGCAATG 59.773 50.000 0.00 0.00 42.03 2.82
2112 2119 2.816087 CCGAGAATAAGGATGGCAATGG 59.184 50.000 0.00 0.00 0.00 3.16
2113 2120 3.496692 CCGAGAATAAGGATGGCAATGGA 60.497 47.826 0.00 0.00 0.00 3.41
2114 2121 4.330250 CGAGAATAAGGATGGCAATGGAT 58.670 43.478 0.00 0.00 0.00 3.41
2115 2122 4.394300 CGAGAATAAGGATGGCAATGGATC 59.606 45.833 0.00 0.00 0.00 3.36
2116 2123 4.330250 AGAATAAGGATGGCAATGGATCG 58.670 43.478 0.00 0.00 0.00 3.69
2117 2124 2.566833 TAAGGATGGCAATGGATCGG 57.433 50.000 0.00 0.00 0.00 4.18
2118 2125 0.178981 AAGGATGGCAATGGATCGGG 60.179 55.000 0.00 0.00 0.00 5.14
2119 2126 1.151450 GGATGGCAATGGATCGGGT 59.849 57.895 0.00 0.00 0.00 5.28
2120 2127 0.468029 GGATGGCAATGGATCGGGTT 60.468 55.000 0.00 0.00 0.00 4.11
2121 2128 0.954452 GATGGCAATGGATCGGGTTC 59.046 55.000 0.00 0.00 0.00 3.62
2122 2129 0.819259 ATGGCAATGGATCGGGTTCG 60.819 55.000 0.00 0.00 37.82 3.95
2123 2130 2.186826 GGCAATGGATCGGGTTCGG 61.187 63.158 0.00 0.00 36.95 4.30
2124 2131 2.834618 GCAATGGATCGGGTTCGGC 61.835 63.158 0.00 0.00 36.95 5.54
2125 2132 2.186826 CAATGGATCGGGTTCGGCC 61.187 63.158 0.00 0.00 36.95 6.13
2134 2141 4.646877 GGTTCGGCCCGGGTTGAA 62.647 66.667 24.63 22.60 0.00 2.69
2135 2142 3.359523 GTTCGGCCCGGGTTGAAC 61.360 66.667 30.98 30.98 34.59 3.18
2136 2143 3.875023 TTCGGCCCGGGTTGAACA 61.875 61.111 24.63 3.27 0.00 3.18
2137 2144 3.417167 TTCGGCCCGGGTTGAACAA 62.417 57.895 24.63 3.80 0.00 2.83
2138 2145 2.675075 CGGCCCGGGTTGAACAAT 60.675 61.111 24.63 0.00 0.00 2.71
2139 2146 1.377463 CGGCCCGGGTTGAACAATA 60.377 57.895 24.63 0.00 0.00 1.90
2140 2147 0.750182 CGGCCCGGGTTGAACAATAT 60.750 55.000 24.63 0.00 0.00 1.28
2141 2148 1.475392 CGGCCCGGGTTGAACAATATA 60.475 52.381 24.63 0.00 0.00 0.86
2142 2149 2.657143 GGCCCGGGTTGAACAATATAA 58.343 47.619 24.63 0.00 0.00 0.98
2143 2150 3.025262 GGCCCGGGTTGAACAATATAAA 58.975 45.455 24.63 0.00 0.00 1.40
2144 2151 3.447944 GGCCCGGGTTGAACAATATAAAA 59.552 43.478 24.63 0.00 0.00 1.52
2145 2152 4.100344 GGCCCGGGTTGAACAATATAAAAT 59.900 41.667 24.63 0.00 0.00 1.82
2146 2153 5.286438 GCCCGGGTTGAACAATATAAAATC 58.714 41.667 24.63 0.00 0.00 2.17
2147 2154 5.737922 GCCCGGGTTGAACAATATAAAATCC 60.738 44.000 24.63 0.00 0.00 3.01
2148 2155 5.361285 CCCGGGTTGAACAATATAAAATCCA 59.639 40.000 14.18 0.00 0.00 3.41
2149 2156 6.041523 CCCGGGTTGAACAATATAAAATCCAT 59.958 38.462 14.18 0.00 0.00 3.41
2150 2157 7.231722 CCCGGGTTGAACAATATAAAATCCATA 59.768 37.037 14.18 0.00 0.00 2.74
2151 2158 8.802267 CCGGGTTGAACAATATAAAATCCATAT 58.198 33.333 0.00 0.00 0.00 1.78
2152 2159 9.840427 CGGGTTGAACAATATAAAATCCATATC 57.160 33.333 0.00 0.00 0.00 1.63
2166 2173 8.786710 AAAATCCATATCCAAATCCATGAAGA 57.213 30.769 0.00 0.00 0.00 2.87
2167 2174 7.771927 AATCCATATCCAAATCCATGAAGAC 57.228 36.000 0.00 0.00 0.00 3.01
2168 2175 6.264771 TCCATATCCAAATCCATGAAGACA 57.735 37.500 0.00 0.00 0.00 3.41
2169 2176 6.855667 TCCATATCCAAATCCATGAAGACAT 58.144 36.000 0.00 0.00 37.19 3.06
2170 2177 7.299896 TCCATATCCAAATCCATGAAGACATT 58.700 34.615 0.00 0.00 34.15 2.71
2171 2178 8.447200 TCCATATCCAAATCCATGAAGACATTA 58.553 33.333 0.00 0.00 34.15 1.90
2172 2179 9.251440 CCATATCCAAATCCATGAAGACATTAT 57.749 33.333 0.00 0.00 34.15 1.28
2174 2181 9.818270 ATATCCAAATCCATGAAGACATTATGT 57.182 29.630 0.00 0.00 34.15 2.29
2175 2182 7.337480 TCCAAATCCATGAAGACATTATGTG 57.663 36.000 1.24 0.00 34.15 3.21
2176 2183 5.981315 CCAAATCCATGAAGACATTATGTGC 59.019 40.000 1.24 0.00 34.15 4.57
2177 2184 5.779529 AATCCATGAAGACATTATGTGCC 57.220 39.130 1.24 0.00 34.15 5.01
2178 2185 3.554934 TCCATGAAGACATTATGTGCCC 58.445 45.455 1.24 0.00 34.15 5.36
2179 2186 2.291465 CCATGAAGACATTATGTGCCCG 59.709 50.000 1.24 0.00 34.15 6.13
2180 2187 2.779755 TGAAGACATTATGTGCCCGT 57.220 45.000 1.24 0.00 0.00 5.28
2181 2188 2.627945 TGAAGACATTATGTGCCCGTC 58.372 47.619 1.24 0.00 0.00 4.79
2182 2189 1.940613 GAAGACATTATGTGCCCGTCC 59.059 52.381 1.24 0.00 0.00 4.79
2183 2190 0.908910 AGACATTATGTGCCCGTCCA 59.091 50.000 1.24 0.00 0.00 4.02
2184 2191 1.490490 AGACATTATGTGCCCGTCCAT 59.510 47.619 1.24 0.00 0.00 3.41
2185 2192 1.603802 GACATTATGTGCCCGTCCATG 59.396 52.381 1.24 0.00 0.00 3.66
2186 2193 1.211703 ACATTATGTGCCCGTCCATGA 59.788 47.619 0.00 0.00 0.00 3.07
2187 2194 2.296792 CATTATGTGCCCGTCCATGAA 58.703 47.619 0.00 0.00 0.00 2.57
2188 2195 2.498644 TTATGTGCCCGTCCATGAAA 57.501 45.000 0.00 0.00 0.00 2.69
2189 2196 2.498644 TATGTGCCCGTCCATGAAAA 57.501 45.000 0.00 0.00 0.00 2.29
2190 2197 1.626686 ATGTGCCCGTCCATGAAAAA 58.373 45.000 0.00 0.00 0.00 1.94
2191 2198 1.626686 TGTGCCCGTCCATGAAAAAT 58.373 45.000 0.00 0.00 0.00 1.82
2192 2199 1.543802 TGTGCCCGTCCATGAAAAATC 59.456 47.619 0.00 0.00 0.00 2.17
2193 2200 1.135112 GTGCCCGTCCATGAAAAATCC 60.135 52.381 0.00 0.00 0.00 3.01
2194 2201 1.181786 GCCCGTCCATGAAAAATCCA 58.818 50.000 0.00 0.00 0.00 3.41
2195 2202 1.756538 GCCCGTCCATGAAAAATCCAT 59.243 47.619 0.00 0.00 0.00 3.41
2196 2203 2.481795 GCCCGTCCATGAAAAATCCATG 60.482 50.000 0.00 0.00 40.66 3.66
2202 2209 3.523606 CATGAAAAATCCATGGGCGAA 57.476 42.857 13.02 0.00 38.12 4.70
2203 2210 3.859443 CATGAAAAATCCATGGGCGAAA 58.141 40.909 13.02 0.00 38.12 3.46
2204 2211 4.252073 CATGAAAAATCCATGGGCGAAAA 58.748 39.130 13.02 0.00 38.12 2.29
2205 2212 4.342862 TGAAAAATCCATGGGCGAAAAA 57.657 36.364 13.02 0.00 0.00 1.94
2206 2213 4.061596 TGAAAAATCCATGGGCGAAAAAC 58.938 39.130 13.02 0.00 0.00 2.43
2207 2214 3.760580 AAAATCCATGGGCGAAAAACA 57.239 38.095 13.02 0.00 0.00 2.83
2208 2215 3.760580 AAATCCATGGGCGAAAAACAA 57.239 38.095 13.02 0.00 0.00 2.83
2209 2216 3.979101 AATCCATGGGCGAAAAACAAT 57.021 38.095 13.02 0.00 0.00 2.71
2210 2217 2.739885 TCCATGGGCGAAAAACAATG 57.260 45.000 13.02 0.00 0.00 2.82
2211 2218 1.967066 TCCATGGGCGAAAAACAATGT 59.033 42.857 13.02 0.00 0.00 2.71
2212 2219 2.029470 TCCATGGGCGAAAAACAATGTC 60.029 45.455 13.02 0.00 0.00 3.06
2213 2220 2.336667 CATGGGCGAAAAACAATGTCC 58.663 47.619 0.00 0.00 0.00 4.02
2214 2221 1.403814 TGGGCGAAAAACAATGTCCA 58.596 45.000 0.00 0.00 0.00 4.02
2215 2222 1.967066 TGGGCGAAAAACAATGTCCAT 59.033 42.857 0.00 0.00 0.00 3.41
2216 2223 2.288702 TGGGCGAAAAACAATGTCCATG 60.289 45.455 0.00 0.00 0.00 3.66
2217 2224 2.288763 GGGCGAAAAACAATGTCCATGT 60.289 45.455 0.00 0.00 0.00 3.21
2218 2225 2.986479 GGCGAAAAACAATGTCCATGTC 59.014 45.455 0.00 0.00 0.00 3.06
2219 2226 2.986479 GCGAAAAACAATGTCCATGTCC 59.014 45.455 0.00 0.00 0.00 4.02
2220 2227 3.551863 GCGAAAAACAATGTCCATGTCCA 60.552 43.478 0.00 0.00 0.00 4.02
2221 2228 4.615949 CGAAAAACAATGTCCATGTCCAA 58.384 39.130 0.00 0.00 0.00 3.53
2222 2229 5.046529 CGAAAAACAATGTCCATGTCCAAA 58.953 37.500 0.00 0.00 0.00 3.28
2223 2230 5.051106 CGAAAAACAATGTCCATGTCCAAAC 60.051 40.000 0.00 0.00 0.00 2.93
2224 2231 4.335400 AAACAATGTCCATGTCCAAACC 57.665 40.909 0.00 0.00 0.00 3.27
2225 2232 2.247358 ACAATGTCCATGTCCAAACCC 58.753 47.619 0.00 0.00 0.00 4.11
2226 2233 1.202114 CAATGTCCATGTCCAAACCCG 59.798 52.381 0.00 0.00 0.00 5.28
2227 2234 0.695924 ATGTCCATGTCCAAACCCGA 59.304 50.000 0.00 0.00 0.00 5.14
2228 2235 0.695924 TGTCCATGTCCAAACCCGAT 59.304 50.000 0.00 0.00 0.00 4.18
2229 2236 1.094785 GTCCATGTCCAAACCCGATG 58.905 55.000 0.00 0.00 0.00 3.84
2230 2237 0.988063 TCCATGTCCAAACCCGATGA 59.012 50.000 0.00 0.00 0.00 2.92
2231 2238 1.563879 TCCATGTCCAAACCCGATGAT 59.436 47.619 0.00 0.00 0.00 2.45
2232 2239 2.774809 TCCATGTCCAAACCCGATGATA 59.225 45.455 0.00 0.00 0.00 2.15
2233 2240 3.394274 TCCATGTCCAAACCCGATGATAT 59.606 43.478 0.00 0.00 0.00 1.63
2234 2241 3.753272 CCATGTCCAAACCCGATGATATC 59.247 47.826 0.00 0.00 0.00 1.63
2235 2242 3.485463 TGTCCAAACCCGATGATATCC 57.515 47.619 0.00 0.00 0.00 2.59
2236 2243 2.774809 TGTCCAAACCCGATGATATCCA 59.225 45.455 0.00 0.00 0.00 3.41
2237 2244 3.394274 TGTCCAAACCCGATGATATCCAT 59.606 43.478 0.00 0.00 38.43 3.41
2238 2245 4.003648 GTCCAAACCCGATGATATCCATC 58.996 47.826 0.00 3.10 46.36 3.51
2264 2271 3.827817 TGGATATCCATCGGGTACTCT 57.172 47.619 20.98 0.00 42.01 3.24
2265 2272 3.698289 TGGATATCCATCGGGTACTCTC 58.302 50.000 20.98 0.00 42.01 3.20
2266 2273 3.075432 TGGATATCCATCGGGTACTCTCA 59.925 47.826 20.98 0.00 42.01 3.27
2267 2274 4.087182 GGATATCCATCGGGTACTCTCAA 58.913 47.826 17.34 0.00 35.64 3.02
2268 2275 4.082136 GGATATCCATCGGGTACTCTCAAC 60.082 50.000 17.34 0.00 35.64 3.18
2269 2276 2.225382 TCCATCGGGTACTCTCAACA 57.775 50.000 0.00 0.00 34.93 3.33
2270 2277 1.822990 TCCATCGGGTACTCTCAACAC 59.177 52.381 0.00 0.00 34.93 3.32
2271 2278 1.469251 CCATCGGGTACTCTCAACACG 60.469 57.143 0.00 0.00 45.03 4.49
2272 2279 1.201647 CATCGGGTACTCTCAACACGT 59.798 52.381 0.00 0.00 44.06 4.49
2273 2280 2.183478 TCGGGTACTCTCAACACGTA 57.817 50.000 0.00 0.00 44.06 3.57
2274 2281 2.715046 TCGGGTACTCTCAACACGTAT 58.285 47.619 0.00 0.00 44.06 3.06
2275 2282 3.872696 TCGGGTACTCTCAACACGTATA 58.127 45.455 0.00 0.00 44.06 1.47
2276 2283 3.623060 TCGGGTACTCTCAACACGTATAC 59.377 47.826 0.00 0.00 44.06 1.47
2277 2284 3.374988 CGGGTACTCTCAACACGTATACA 59.625 47.826 3.32 0.00 38.91 2.29
2278 2285 4.036027 CGGGTACTCTCAACACGTATACAT 59.964 45.833 3.32 0.00 38.91 2.29
2279 2286 5.237127 CGGGTACTCTCAACACGTATACATA 59.763 44.000 3.32 0.00 38.91 2.29
2280 2287 6.072838 CGGGTACTCTCAACACGTATACATAT 60.073 42.308 3.32 0.00 38.91 1.78
2281 2288 7.118245 CGGGTACTCTCAACACGTATACATATA 59.882 40.741 3.32 0.00 38.91 0.86
2282 2289 8.954350 GGGTACTCTCAACACGTATACATATAT 58.046 37.037 3.32 0.00 0.00 0.86
2312 2319 3.696281 CACACAAGTGCACAAGATTCA 57.304 42.857 21.04 0.00 39.21 2.57
2313 2320 3.365832 CACACAAGTGCACAAGATTCAC 58.634 45.455 21.04 0.00 39.21 3.18
2314 2321 3.016031 ACACAAGTGCACAAGATTCACA 58.984 40.909 21.04 0.00 33.44 3.58
2315 2322 3.633525 ACACAAGTGCACAAGATTCACAT 59.366 39.130 21.04 0.00 33.44 3.21
2316 2323 4.821260 ACACAAGTGCACAAGATTCACATA 59.179 37.500 21.04 0.00 33.44 2.29
2317 2324 5.299028 ACACAAGTGCACAAGATTCACATAA 59.701 36.000 21.04 0.00 33.44 1.90
2318 2325 5.854866 CACAAGTGCACAAGATTCACATAAG 59.145 40.000 21.04 0.00 33.44 1.73
2319 2326 5.764686 ACAAGTGCACAAGATTCACATAAGA 59.235 36.000 21.04 0.00 33.44 2.10
2320 2327 6.432162 ACAAGTGCACAAGATTCACATAAGAT 59.568 34.615 21.04 0.00 33.44 2.40
2321 2328 6.674694 AGTGCACAAGATTCACATAAGATC 57.325 37.500 21.04 0.00 33.44 2.75
2322 2329 6.413052 AGTGCACAAGATTCACATAAGATCT 58.587 36.000 21.04 0.00 33.44 2.75
2323 2330 6.538021 AGTGCACAAGATTCACATAAGATCTC 59.462 38.462 21.04 0.00 33.44 2.75
2324 2331 6.314648 GTGCACAAGATTCACATAAGATCTCA 59.685 38.462 13.17 0.00 0.00 3.27
2325 2332 6.880529 TGCACAAGATTCACATAAGATCTCAA 59.119 34.615 0.00 0.00 0.00 3.02
2326 2333 7.391275 TGCACAAGATTCACATAAGATCTCAAA 59.609 33.333 0.00 0.00 0.00 2.69
2327 2334 8.404000 GCACAAGATTCACATAAGATCTCAAAT 58.596 33.333 0.00 0.00 0.00 2.32
2342 2349 9.434420 AAGATCTCAAATTTTCACAAAACAACA 57.566 25.926 0.00 0.00 32.37 3.33
2343 2350 9.603921 AGATCTCAAATTTTCACAAAACAACAT 57.396 25.926 0.00 0.00 32.37 2.71
2346 2353 8.816144 TCTCAAATTTTCACAAAACAACATAGC 58.184 29.630 0.00 0.00 32.37 2.97
2347 2354 8.715191 TCAAATTTTCACAAAACAACATAGCT 57.285 26.923 0.00 0.00 32.37 3.32
2348 2355 8.816144 TCAAATTTTCACAAAACAACATAGCTC 58.184 29.630 0.00 0.00 32.37 4.09
2349 2356 8.602328 CAAATTTTCACAAAACAACATAGCTCA 58.398 29.630 0.00 0.00 32.37 4.26
2350 2357 8.715191 AATTTTCACAAAACAACATAGCTCAA 57.285 26.923 0.00 0.00 32.37 3.02
2351 2358 7.754069 TTTTCACAAAACAACATAGCTCAAG 57.246 32.000 0.00 0.00 0.00 3.02
2352 2359 6.449635 TTCACAAAACAACATAGCTCAAGT 57.550 33.333 0.00 0.00 0.00 3.16
2353 2360 5.820131 TCACAAAACAACATAGCTCAAGTG 58.180 37.500 0.00 0.00 0.00 3.16
2354 2361 4.442073 CACAAAACAACATAGCTCAAGTGC 59.558 41.667 0.00 0.00 0.00 4.40
2355 2362 4.097741 ACAAAACAACATAGCTCAAGTGCA 59.902 37.500 0.00 0.00 34.99 4.57
2356 2363 3.904136 AACAACATAGCTCAAGTGCAC 57.096 42.857 9.40 9.40 34.99 4.57
2357 2364 2.849942 ACAACATAGCTCAAGTGCACA 58.150 42.857 21.04 0.00 34.99 4.57
2358 2365 3.213506 ACAACATAGCTCAAGTGCACAA 58.786 40.909 21.04 2.83 34.99 3.33
2359 2366 3.003689 ACAACATAGCTCAAGTGCACAAC 59.996 43.478 21.04 2.99 34.99 3.32
2360 2367 2.849942 ACATAGCTCAAGTGCACAACA 58.150 42.857 21.04 0.07 34.99 3.33
2361 2368 3.415212 ACATAGCTCAAGTGCACAACAT 58.585 40.909 21.04 2.04 34.99 2.71
2362 2369 3.438087 ACATAGCTCAAGTGCACAACATC 59.562 43.478 21.04 4.97 34.99 3.06
2363 2370 1.971481 AGCTCAAGTGCACAACATCA 58.029 45.000 21.04 0.00 34.99 3.07
2364 2371 2.300433 AGCTCAAGTGCACAACATCAA 58.700 42.857 21.04 0.00 34.99 2.57
2365 2372 2.689471 AGCTCAAGTGCACAACATCAAA 59.311 40.909 21.04 0.00 34.99 2.69
2366 2373 3.319972 AGCTCAAGTGCACAACATCAAAT 59.680 39.130 21.04 0.00 34.99 2.32
2367 2374 3.671928 GCTCAAGTGCACAACATCAAATC 59.328 43.478 21.04 0.00 0.00 2.17
2368 2375 4.793678 GCTCAAGTGCACAACATCAAATCA 60.794 41.667 21.04 0.00 0.00 2.57
2369 2376 5.456548 TCAAGTGCACAACATCAAATCAT 57.543 34.783 21.04 0.00 0.00 2.45
2370 2377 5.463286 TCAAGTGCACAACATCAAATCATC 58.537 37.500 21.04 0.00 0.00 2.92
2371 2378 5.242171 TCAAGTGCACAACATCAAATCATCT 59.758 36.000 21.04 0.00 0.00 2.90
2372 2379 5.717078 AGTGCACAACATCAAATCATCTT 57.283 34.783 21.04 0.00 0.00 2.40
2373 2380 5.706916 AGTGCACAACATCAAATCATCTTC 58.293 37.500 21.04 0.00 0.00 2.87
2374 2381 5.475909 AGTGCACAACATCAAATCATCTTCT 59.524 36.000 21.04 0.00 0.00 2.85
2375 2382 6.656270 AGTGCACAACATCAAATCATCTTCTA 59.344 34.615 21.04 0.00 0.00 2.10
2376 2383 6.965500 GTGCACAACATCAAATCATCTTCTAG 59.035 38.462 13.17 0.00 0.00 2.43
2377 2384 6.880529 TGCACAACATCAAATCATCTTCTAGA 59.119 34.615 0.00 0.00 0.00 2.43
2378 2385 7.555195 TGCACAACATCAAATCATCTTCTAGAT 59.445 33.333 0.00 0.00 34.74 1.98
2379 2386 8.404000 GCACAACATCAAATCATCTTCTAGATT 58.596 33.333 0.00 0.00 31.32 2.40
2380 2387 9.932699 CACAACATCAAATCATCTTCTAGATTC 57.067 33.333 0.00 0.00 31.32 2.52
2381 2388 9.902684 ACAACATCAAATCATCTTCTAGATTCT 57.097 29.630 0.00 0.00 31.32 2.40
2403 2410 9.846248 ATTCTAACAAGATGACATAAAAAGTGC 57.154 29.630 0.00 0.00 0.00 4.40
2404 2411 8.389779 TCTAACAAGATGACATAAAAAGTGCA 57.610 30.769 0.00 0.00 0.00 4.57
2405 2412 8.289618 TCTAACAAGATGACATAAAAAGTGCAC 58.710 33.333 9.40 9.40 0.00 4.57
2406 2413 6.389830 ACAAGATGACATAAAAAGTGCACA 57.610 33.333 21.04 0.00 0.00 4.57
2407 2414 6.985117 ACAAGATGACATAAAAAGTGCACAT 58.015 32.000 21.04 3.48 0.00 3.21
2408 2415 7.086376 ACAAGATGACATAAAAAGTGCACATC 58.914 34.615 21.04 8.94 35.70 3.06
2409 2416 6.822667 AGATGACATAAAAAGTGCACATCA 57.177 33.333 21.04 9.19 36.78 3.07
2410 2417 6.615088 AGATGACATAAAAAGTGCACATCAC 58.385 36.000 21.04 0.52 45.98 3.06
2411 2418 5.119931 TGACATAAAAAGTGCACATCACC 57.880 39.130 21.04 0.00 46.81 4.02
2412 2419 4.582240 TGACATAAAAAGTGCACATCACCA 59.418 37.500 21.04 0.00 46.81 4.17
2413 2420 5.068329 TGACATAAAAAGTGCACATCACCAA 59.932 36.000 21.04 0.00 46.81 3.67
2414 2421 5.911752 ACATAAAAAGTGCACATCACCAAA 58.088 33.333 21.04 0.00 46.81 3.28
2415 2422 5.752955 ACATAAAAAGTGCACATCACCAAAC 59.247 36.000 21.04 0.00 46.81 2.93
2416 2423 3.883830 AAAAGTGCACATCACCAAACA 57.116 38.095 21.04 0.00 46.81 2.83
2417 2424 3.883830 AAAGTGCACATCACCAAACAA 57.116 38.095 21.04 0.00 46.81 2.83
2418 2425 4.405116 AAAGTGCACATCACCAAACAAT 57.595 36.364 21.04 0.00 46.81 2.71
2419 2426 3.648339 AGTGCACATCACCAAACAATC 57.352 42.857 21.04 0.00 46.81 2.67
2420 2427 3.225104 AGTGCACATCACCAAACAATCT 58.775 40.909 21.04 0.00 46.81 2.40
2421 2428 3.254166 AGTGCACATCACCAAACAATCTC 59.746 43.478 21.04 0.00 46.81 2.75
2422 2429 3.254166 GTGCACATCACCAAACAATCTCT 59.746 43.478 13.17 0.00 39.79 3.10
2423 2430 3.503363 TGCACATCACCAAACAATCTCTC 59.497 43.478 0.00 0.00 0.00 3.20
2424 2431 3.503363 GCACATCACCAAACAATCTCTCA 59.497 43.478 0.00 0.00 0.00 3.27
2425 2432 4.022935 GCACATCACCAAACAATCTCTCAA 60.023 41.667 0.00 0.00 0.00 3.02
2426 2433 5.507817 GCACATCACCAAACAATCTCTCAAA 60.508 40.000 0.00 0.00 0.00 2.69
2427 2434 6.684686 CACATCACCAAACAATCTCTCAAAT 58.315 36.000 0.00 0.00 0.00 2.32
2428 2435 7.149973 CACATCACCAAACAATCTCTCAAATT 58.850 34.615 0.00 0.00 0.00 1.82
2429 2436 7.327761 CACATCACCAAACAATCTCTCAAATTC 59.672 37.037 0.00 0.00 0.00 2.17
2430 2437 7.232127 ACATCACCAAACAATCTCTCAAATTCT 59.768 33.333 0.00 0.00 0.00 2.40
2431 2438 7.206981 TCACCAAACAATCTCTCAAATTCTC 57.793 36.000 0.00 0.00 0.00 2.87
2432 2439 6.772233 TCACCAAACAATCTCTCAAATTCTCA 59.228 34.615 0.00 0.00 0.00 3.27
2433 2440 6.860023 CACCAAACAATCTCTCAAATTCTCAC 59.140 38.462 0.00 0.00 0.00 3.51
2434 2441 6.547141 ACCAAACAATCTCTCAAATTCTCACA 59.453 34.615 0.00 0.00 0.00 3.58
2435 2442 7.232127 ACCAAACAATCTCTCAAATTCTCACAT 59.768 33.333 0.00 0.00 0.00 3.21
2436 2443 7.754027 CCAAACAATCTCTCAAATTCTCACATC 59.246 37.037 0.00 0.00 0.00 3.06
2437 2444 7.991084 AACAATCTCTCAAATTCTCACATCA 57.009 32.000 0.00 0.00 0.00 3.07
2438 2445 7.375106 ACAATCTCTCAAATTCTCACATCAC 57.625 36.000 0.00 0.00 0.00 3.06
2439 2446 6.373774 ACAATCTCTCAAATTCTCACATCACC 59.626 38.462 0.00 0.00 0.00 4.02
2440 2447 5.488262 TCTCTCAAATTCTCACATCACCA 57.512 39.130 0.00 0.00 0.00 4.17
2441 2448 5.868454 TCTCTCAAATTCTCACATCACCAA 58.132 37.500 0.00 0.00 0.00 3.67
2442 2449 6.298361 TCTCTCAAATTCTCACATCACCAAA 58.702 36.000 0.00 0.00 0.00 3.28
2443 2450 6.944290 TCTCTCAAATTCTCACATCACCAAAT 59.056 34.615 0.00 0.00 0.00 2.32
2444 2451 8.102676 TCTCTCAAATTCTCACATCACCAAATA 58.897 33.333 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.976490 TACCCACGGAGCCTGGAGG 62.976 68.421 0.00 0.00 38.53 4.30
3 4 1.338136 ATTACCCACGGAGCCTGGAG 61.338 60.000 0.00 0.00 0.00 3.86
6 7 0.828022 TGTATTACCCACGGAGCCTG 59.172 55.000 0.00 0.00 0.00 4.85
7 8 1.208776 GTTGTATTACCCACGGAGCCT 59.791 52.381 0.00 0.00 0.00 4.58
8 9 1.208776 AGTTGTATTACCCACGGAGCC 59.791 52.381 0.00 0.00 0.00 4.70
9 10 2.277084 CAGTTGTATTACCCACGGAGC 58.723 52.381 0.00 0.00 0.00 4.70
10 11 2.498481 TCCAGTTGTATTACCCACGGAG 59.502 50.000 0.00 0.00 0.00 4.63
11 12 2.538222 TCCAGTTGTATTACCCACGGA 58.462 47.619 0.00 0.00 0.00 4.69
12 13 3.134081 AGATCCAGTTGTATTACCCACGG 59.866 47.826 0.00 0.00 0.00 4.94
13 14 4.402056 AGATCCAGTTGTATTACCCACG 57.598 45.455 0.00 0.00 0.00 4.94
14 15 7.441458 GTCAATAGATCCAGTTGTATTACCCAC 59.559 40.741 0.00 0.00 0.00 4.61
15 16 7.126573 TGTCAATAGATCCAGTTGTATTACCCA 59.873 37.037 0.00 0.00 0.00 4.51
16 17 7.441458 GTGTCAATAGATCCAGTTGTATTACCC 59.559 40.741 0.00 0.00 0.00 3.69
17 18 7.441458 GGTGTCAATAGATCCAGTTGTATTACC 59.559 40.741 0.00 0.00 0.00 2.85
18 19 7.441458 GGGTGTCAATAGATCCAGTTGTATTAC 59.559 40.741 0.00 0.00 0.00 1.89
19 20 7.126573 TGGGTGTCAATAGATCCAGTTGTATTA 59.873 37.037 0.00 0.00 0.00 0.98
20 21 6.069673 TGGGTGTCAATAGATCCAGTTGTATT 60.070 38.462 0.00 0.00 0.00 1.89
21 22 5.428457 TGGGTGTCAATAGATCCAGTTGTAT 59.572 40.000 0.00 0.00 0.00 2.29
22 23 4.780554 TGGGTGTCAATAGATCCAGTTGTA 59.219 41.667 0.00 0.00 0.00 2.41
23 24 3.587061 TGGGTGTCAATAGATCCAGTTGT 59.413 43.478 0.00 0.00 0.00 3.32
24 25 4.220693 TGGGTGTCAATAGATCCAGTTG 57.779 45.455 0.00 0.00 0.00 3.16
25 26 4.927267 TTGGGTGTCAATAGATCCAGTT 57.073 40.909 0.00 0.00 0.00 3.16
26 27 4.927267 TTTGGGTGTCAATAGATCCAGT 57.073 40.909 0.00 0.00 34.98 4.00
27 28 5.476599 TGTTTTTGGGTGTCAATAGATCCAG 59.523 40.000 0.00 0.00 34.98 3.86
28 29 5.389520 TGTTTTTGGGTGTCAATAGATCCA 58.610 37.500 0.00 0.00 34.98 3.41
29 30 5.975693 TGTTTTTGGGTGTCAATAGATCC 57.024 39.130 0.00 0.00 34.98 3.36
30 31 8.956426 TCTATTGTTTTTGGGTGTCAATAGATC 58.044 33.333 16.64 0.00 45.12 2.75
31 32 8.877864 TCTATTGTTTTTGGGTGTCAATAGAT 57.122 30.769 16.64 0.00 45.12 1.98
32 33 8.698973 TTCTATTGTTTTTGGGTGTCAATAGA 57.301 30.769 16.64 16.64 46.67 1.98
33 34 9.410556 CTTTCTATTGTTTTTGGGTGTCAATAG 57.589 33.333 13.58 13.58 44.00 1.73
34 35 8.919145 ACTTTCTATTGTTTTTGGGTGTCAATA 58.081 29.630 0.00 0.00 34.98 1.90
35 36 7.791029 ACTTTCTATTGTTTTTGGGTGTCAAT 58.209 30.769 0.00 0.00 34.98 2.57
36 37 7.176589 ACTTTCTATTGTTTTTGGGTGTCAA 57.823 32.000 0.00 0.00 0.00 3.18
37 38 6.783708 ACTTTCTATTGTTTTTGGGTGTCA 57.216 33.333 0.00 0.00 0.00 3.58
38 39 9.244799 CTAAACTTTCTATTGTTTTTGGGTGTC 57.755 33.333 0.00 0.00 37.53 3.67
39 40 8.755028 ACTAAACTTTCTATTGTTTTTGGGTGT 58.245 29.630 0.00 0.00 37.53 4.16
40 41 9.244799 GACTAAACTTTCTATTGTTTTTGGGTG 57.755 33.333 0.00 0.00 37.53 4.61
41 42 8.973182 TGACTAAACTTTCTATTGTTTTTGGGT 58.027 29.630 0.00 0.00 37.53 4.51
42 43 9.463443 CTGACTAAACTTTCTATTGTTTTTGGG 57.537 33.333 0.00 0.00 37.53 4.12
52 53 8.870879 GCGAATGTAACTGACTAAACTTTCTAT 58.129 33.333 0.00 0.00 0.00 1.98
53 54 8.086522 AGCGAATGTAACTGACTAAACTTTCTA 58.913 33.333 0.00 0.00 0.00 2.10
54 55 6.929606 AGCGAATGTAACTGACTAAACTTTCT 59.070 34.615 0.00 0.00 0.00 2.52
55 56 7.118422 AGCGAATGTAACTGACTAAACTTTC 57.882 36.000 0.00 0.00 0.00 2.62
56 57 8.597662 TTAGCGAATGTAACTGACTAAACTTT 57.402 30.769 0.00 0.00 0.00 2.66
57 58 7.148623 GCTTAGCGAATGTAACTGACTAAACTT 60.149 37.037 0.00 0.00 0.00 2.66
58 59 6.310711 GCTTAGCGAATGTAACTGACTAAACT 59.689 38.462 0.00 0.00 0.00 2.66
59 60 6.090358 TGCTTAGCGAATGTAACTGACTAAAC 59.910 38.462 0.00 0.00 0.00 2.01
60 61 6.090358 GTGCTTAGCGAATGTAACTGACTAAA 59.910 38.462 0.00 0.00 0.00 1.85
61 62 5.575606 GTGCTTAGCGAATGTAACTGACTAA 59.424 40.000 0.00 0.00 0.00 2.24
62 63 5.100259 GTGCTTAGCGAATGTAACTGACTA 58.900 41.667 0.00 0.00 0.00 2.59
63 64 3.927142 GTGCTTAGCGAATGTAACTGACT 59.073 43.478 0.00 0.00 0.00 3.41
64 65 3.678072 TGTGCTTAGCGAATGTAACTGAC 59.322 43.478 0.00 0.00 0.00 3.51
65 66 3.920446 TGTGCTTAGCGAATGTAACTGA 58.080 40.909 0.00 0.00 0.00 3.41
66 67 4.661993 TTGTGCTTAGCGAATGTAACTG 57.338 40.909 0.00 0.00 0.00 3.16
67 68 4.154195 CCTTTGTGCTTAGCGAATGTAACT 59.846 41.667 0.00 0.00 0.00 2.24
68 69 4.153475 TCCTTTGTGCTTAGCGAATGTAAC 59.847 41.667 0.00 0.00 0.00 2.50
69 70 4.320023 TCCTTTGTGCTTAGCGAATGTAA 58.680 39.130 0.00 0.00 0.00 2.41
70 71 3.932822 TCCTTTGTGCTTAGCGAATGTA 58.067 40.909 0.00 0.00 0.00 2.29
71 72 2.778299 TCCTTTGTGCTTAGCGAATGT 58.222 42.857 0.00 0.00 0.00 2.71
72 73 3.829886 TTCCTTTGTGCTTAGCGAATG 57.170 42.857 0.00 0.00 0.00 2.67
73 74 4.072131 TCTTTCCTTTGTGCTTAGCGAAT 58.928 39.130 0.00 0.00 0.00 3.34
74 75 3.472652 TCTTTCCTTTGTGCTTAGCGAA 58.527 40.909 0.00 0.00 0.00 4.70
75 76 3.120321 TCTTTCCTTTGTGCTTAGCGA 57.880 42.857 0.00 0.00 0.00 4.93
76 77 3.896648 TTCTTTCCTTTGTGCTTAGCG 57.103 42.857 0.00 0.00 0.00 4.26
77 78 4.278419 TCCTTTCTTTCCTTTGTGCTTAGC 59.722 41.667 0.00 0.00 0.00 3.09
78 79 6.385033 CATCCTTTCTTTCCTTTGTGCTTAG 58.615 40.000 0.00 0.00 0.00 2.18
79 80 5.278957 GCATCCTTTCTTTCCTTTGTGCTTA 60.279 40.000 0.00 0.00 0.00 3.09
80 81 4.502087 GCATCCTTTCTTTCCTTTGTGCTT 60.502 41.667 0.00 0.00 0.00 3.91
81 82 3.006217 GCATCCTTTCTTTCCTTTGTGCT 59.994 43.478 0.00 0.00 0.00 4.40
82 83 3.320626 GCATCCTTTCTTTCCTTTGTGC 58.679 45.455 0.00 0.00 0.00 4.57
83 84 3.253188 TCGCATCCTTTCTTTCCTTTGTG 59.747 43.478 0.00 0.00 0.00 3.33
84 85 3.486383 TCGCATCCTTTCTTTCCTTTGT 58.514 40.909 0.00 0.00 0.00 2.83
85 86 4.479619 CTTCGCATCCTTTCTTTCCTTTG 58.520 43.478 0.00 0.00 0.00 2.77
86 87 3.057245 GCTTCGCATCCTTTCTTTCCTTT 60.057 43.478 0.00 0.00 0.00 3.11
87 88 2.489722 GCTTCGCATCCTTTCTTTCCTT 59.510 45.455 0.00 0.00 0.00 3.36
88 89 2.087646 GCTTCGCATCCTTTCTTTCCT 58.912 47.619 0.00 0.00 0.00 3.36
89 90 1.202076 CGCTTCGCATCCTTTCTTTCC 60.202 52.381 0.00 0.00 0.00 3.13
90 91 1.732259 TCGCTTCGCATCCTTTCTTTC 59.268 47.619 0.00 0.00 0.00 2.62
91 92 1.808411 TCGCTTCGCATCCTTTCTTT 58.192 45.000 0.00 0.00 0.00 2.52
92 93 1.808411 TTCGCTTCGCATCCTTTCTT 58.192 45.000 0.00 0.00 0.00 2.52
93 94 2.029838 ATTCGCTTCGCATCCTTTCT 57.970 45.000 0.00 0.00 0.00 2.52
94 95 3.803555 CATATTCGCTTCGCATCCTTTC 58.196 45.455 0.00 0.00 0.00 2.62
95 96 2.031682 GCATATTCGCTTCGCATCCTTT 60.032 45.455 0.00 0.00 0.00 3.11
96 97 1.532868 GCATATTCGCTTCGCATCCTT 59.467 47.619 0.00 0.00 0.00 3.36
97 98 1.151668 GCATATTCGCTTCGCATCCT 58.848 50.000 0.00 0.00 0.00 3.24
98 99 0.867746 TGCATATTCGCTTCGCATCC 59.132 50.000 0.00 0.00 0.00 3.51
99 100 2.888513 ATGCATATTCGCTTCGCATC 57.111 45.000 0.00 0.00 38.96 3.91
100 101 4.747540 TTTATGCATATTCGCTTCGCAT 57.252 36.364 7.36 0.00 44.92 4.73
101 102 4.035091 AGTTTTATGCATATTCGCTTCGCA 59.965 37.500 7.36 0.00 36.95 5.10
102 103 4.527564 AGTTTTATGCATATTCGCTTCGC 58.472 39.130 7.36 0.00 0.00 4.70
103 104 6.071463 GGTAGTTTTATGCATATTCGCTTCG 58.929 40.000 7.36 0.00 0.00 3.79
104 105 7.190920 AGGTAGTTTTATGCATATTCGCTTC 57.809 36.000 7.36 2.50 0.00 3.86
105 106 8.671384 TTAGGTAGTTTTATGCATATTCGCTT 57.329 30.769 7.36 0.00 0.00 4.68
106 107 8.671384 TTTAGGTAGTTTTATGCATATTCGCT 57.329 30.769 7.36 6.55 0.00 4.93
107 108 9.893305 AATTTAGGTAGTTTTATGCATATTCGC 57.107 29.630 7.36 0.00 0.00 4.70
122 123 9.816787 CTCTCCTCTTAGGATAATTTAGGTAGT 57.183 37.037 0.00 0.00 44.81 2.73
125 126 8.738592 TCTCTCTCCTCTTAGGATAATTTAGGT 58.261 37.037 0.00 0.00 44.81 3.08
126 127 9.020731 GTCTCTCTCCTCTTAGGATAATTTAGG 57.979 40.741 0.00 0.00 44.81 2.69
127 128 9.020731 GGTCTCTCTCCTCTTAGGATAATTTAG 57.979 40.741 0.00 0.00 44.81 1.85
128 129 8.738592 AGGTCTCTCTCCTCTTAGGATAATTTA 58.261 37.037 0.00 0.00 44.81 1.40
129 130 7.508977 CAGGTCTCTCTCCTCTTAGGATAATTT 59.491 40.741 0.00 0.00 44.81 1.82
130 131 7.010160 CAGGTCTCTCTCCTCTTAGGATAATT 58.990 42.308 0.00 0.00 44.81 1.40
131 132 6.468651 CCAGGTCTCTCTCCTCTTAGGATAAT 60.469 46.154 0.00 0.00 44.81 1.28
132 133 5.163034 CCAGGTCTCTCTCCTCTTAGGATAA 60.163 48.000 0.00 0.00 44.81 1.75
133 134 4.352595 CCAGGTCTCTCTCCTCTTAGGATA 59.647 50.000 0.00 0.00 44.81 2.59
134 135 3.140144 CCAGGTCTCTCTCCTCTTAGGAT 59.860 52.174 0.00 0.00 44.81 3.24
135 136 2.512056 CCAGGTCTCTCTCCTCTTAGGA 59.488 54.545 0.00 0.00 43.43 2.94
136 137 2.512056 TCCAGGTCTCTCTCCTCTTAGG 59.488 54.545 0.00 0.00 36.46 2.69
137 138 3.943671 TCCAGGTCTCTCTCCTCTTAG 57.056 52.381 0.00 0.00 32.37 2.18
138 139 3.853181 TCTTCCAGGTCTCTCTCCTCTTA 59.147 47.826 0.00 0.00 32.37 2.10
139 140 2.652348 TCTTCCAGGTCTCTCTCCTCTT 59.348 50.000 0.00 0.00 32.37 2.85
140 141 2.283834 TCTTCCAGGTCTCTCTCCTCT 58.716 52.381 0.00 0.00 32.37 3.69
141 142 2.818751 TCTTCCAGGTCTCTCTCCTC 57.181 55.000 0.00 0.00 32.37 3.71
142 143 2.954539 GCATCTTCCAGGTCTCTCTCCT 60.955 54.545 0.00 0.00 35.45 3.69
143 144 1.412343 GCATCTTCCAGGTCTCTCTCC 59.588 57.143 0.00 0.00 0.00 3.71
144 145 2.362077 GAGCATCTTCCAGGTCTCTCTC 59.638 54.545 0.00 0.00 0.00 3.20
145 146 2.292126 TGAGCATCTTCCAGGTCTCTCT 60.292 50.000 0.00 0.00 34.92 3.10
146 147 2.106566 TGAGCATCTTCCAGGTCTCTC 58.893 52.381 0.00 0.00 34.92 3.20
147 148 2.244486 TGAGCATCTTCCAGGTCTCT 57.756 50.000 0.00 0.00 34.92 3.10
148 149 3.204526 CATTGAGCATCTTCCAGGTCTC 58.795 50.000 0.00 0.00 34.92 3.36
149 150 2.683152 GCATTGAGCATCTTCCAGGTCT 60.683 50.000 0.00 0.00 44.79 3.85
150 151 1.674962 GCATTGAGCATCTTCCAGGTC 59.325 52.381 0.00 0.00 44.79 3.85
151 152 1.760192 GCATTGAGCATCTTCCAGGT 58.240 50.000 0.00 0.00 44.79 4.00
162 163 3.732721 GTGAGTTCAAGTTTGCATTGAGC 59.267 43.478 7.14 7.14 45.96 4.26
163 164 5.179045 AGTGAGTTCAAGTTTGCATTGAG 57.821 39.130 1.79 0.00 37.91 3.02
164 165 5.581126 AAGTGAGTTCAAGTTTGCATTGA 57.419 34.783 0.00 0.00 34.93 2.57
165 166 6.728200 TCTAAGTGAGTTCAAGTTTGCATTG 58.272 36.000 0.00 0.00 0.00 2.82
166 167 6.942532 TCTAAGTGAGTTCAAGTTTGCATT 57.057 33.333 0.00 0.00 0.00 3.56
167 168 7.516198 AATCTAAGTGAGTTCAAGTTTGCAT 57.484 32.000 0.00 0.00 0.00 3.96
168 169 6.942532 AATCTAAGTGAGTTCAAGTTTGCA 57.057 33.333 0.00 0.00 0.00 4.08
169 170 7.702348 ACAAAATCTAAGTGAGTTCAAGTTTGC 59.298 33.333 7.13 0.00 31.16 3.68
170 171 9.573133 AACAAAATCTAAGTGAGTTCAAGTTTG 57.427 29.630 6.16 6.16 31.16 2.93
171 172 9.573133 CAACAAAATCTAAGTGAGTTCAAGTTT 57.427 29.630 0.00 0.00 31.16 2.66
172 173 8.190784 CCAACAAAATCTAAGTGAGTTCAAGTT 58.809 33.333 0.00 0.00 31.16 2.66
173 174 7.556275 TCCAACAAAATCTAAGTGAGTTCAAGT 59.444 33.333 0.00 0.00 31.16 3.16
174 175 7.857885 GTCCAACAAAATCTAAGTGAGTTCAAG 59.142 37.037 0.00 0.00 31.16 3.02
175 176 7.556275 AGTCCAACAAAATCTAAGTGAGTTCAA 59.444 33.333 0.00 0.00 31.16 2.69
176 177 7.012327 CAGTCCAACAAAATCTAAGTGAGTTCA 59.988 37.037 0.00 0.00 31.16 3.18
177 178 7.226720 TCAGTCCAACAAAATCTAAGTGAGTTC 59.773 37.037 0.00 0.00 31.16 3.01
178 179 7.054124 TCAGTCCAACAAAATCTAAGTGAGTT 58.946 34.615 0.00 0.00 34.11 3.01
179 180 6.591935 TCAGTCCAACAAAATCTAAGTGAGT 58.408 36.000 0.00 0.00 0.00 3.41
180 181 7.496529 TTCAGTCCAACAAAATCTAAGTGAG 57.503 36.000 0.00 0.00 0.00 3.51
181 182 7.873719 TTTCAGTCCAACAAAATCTAAGTGA 57.126 32.000 0.00 0.00 0.00 3.41
182 183 8.971321 CATTTTCAGTCCAACAAAATCTAAGTG 58.029 33.333 0.00 0.00 29.17 3.16
183 184 8.912988 TCATTTTCAGTCCAACAAAATCTAAGT 58.087 29.630 0.00 0.00 29.17 2.24
184 185 9.918630 ATCATTTTCAGTCCAACAAAATCTAAG 57.081 29.630 0.00 0.00 29.17 2.18
187 188 8.859090 TGTATCATTTTCAGTCCAACAAAATCT 58.141 29.630 0.00 0.00 29.17 2.40
188 189 9.132521 CTGTATCATTTTCAGTCCAACAAAATC 57.867 33.333 0.00 0.00 29.17 2.17
189 190 8.859090 TCTGTATCATTTTCAGTCCAACAAAAT 58.141 29.630 0.00 0.00 31.30 1.82
190 191 8.231692 TCTGTATCATTTTCAGTCCAACAAAA 57.768 30.769 0.00 0.00 0.00 2.44
191 192 7.815840 TCTGTATCATTTTCAGTCCAACAAA 57.184 32.000 0.00 0.00 0.00 2.83
192 193 8.408043 AATCTGTATCATTTTCAGTCCAACAA 57.592 30.769 0.00 0.00 0.00 2.83
193 194 7.665145 TGAATCTGTATCATTTTCAGTCCAACA 59.335 33.333 0.00 0.00 0.00 3.33
194 195 8.044060 TGAATCTGTATCATTTTCAGTCCAAC 57.956 34.615 0.00 0.00 0.00 3.77
195 196 8.812513 ATGAATCTGTATCATTTTCAGTCCAA 57.187 30.769 0.00 0.00 33.84 3.53
236 237 9.502091 TCTACTAGTGAGTTTGCATGTAATTTT 57.498 29.630 5.39 0.00 37.10 1.82
237 238 9.502091 TTCTACTAGTGAGTTTGCATGTAATTT 57.498 29.630 5.39 0.00 37.10 1.82
238 239 9.502091 TTTCTACTAGTGAGTTTGCATGTAATT 57.498 29.630 5.39 0.00 37.10 1.40
239 240 9.502091 TTTTCTACTAGTGAGTTTGCATGTAAT 57.498 29.630 5.39 0.00 37.10 1.89
240 241 8.896320 TTTTCTACTAGTGAGTTTGCATGTAA 57.104 30.769 5.39 0.00 37.10 2.41
241 242 8.896320 TTTTTCTACTAGTGAGTTTGCATGTA 57.104 30.769 5.39 0.00 37.10 2.29
242 243 7.041098 CCTTTTTCTACTAGTGAGTTTGCATGT 60.041 37.037 5.39 0.00 37.10 3.21
243 244 7.301054 CCTTTTTCTACTAGTGAGTTTGCATG 58.699 38.462 5.39 0.00 37.10 4.06
244 245 6.431234 CCCTTTTTCTACTAGTGAGTTTGCAT 59.569 38.462 5.39 0.00 37.10 3.96
245 246 5.763204 CCCTTTTTCTACTAGTGAGTTTGCA 59.237 40.000 5.39 0.00 37.10 4.08
246 247 5.181433 CCCCTTTTTCTACTAGTGAGTTTGC 59.819 44.000 5.39 0.00 37.10 3.68
247 248 5.181433 GCCCCTTTTTCTACTAGTGAGTTTG 59.819 44.000 5.39 0.00 37.10 2.93
248 249 5.163131 TGCCCCTTTTTCTACTAGTGAGTTT 60.163 40.000 5.39 0.00 37.10 2.66
249 250 4.349930 TGCCCCTTTTTCTACTAGTGAGTT 59.650 41.667 5.39 0.00 37.10 3.01
250 251 3.908103 TGCCCCTTTTTCTACTAGTGAGT 59.092 43.478 5.39 0.00 39.92 3.41
251 252 4.553330 TGCCCCTTTTTCTACTAGTGAG 57.447 45.455 5.39 0.00 0.00 3.51
392 393 1.720694 CGGTTCGTGCCACAAACCTT 61.721 55.000 15.32 0.00 40.25 3.50
393 394 2.184167 CGGTTCGTGCCACAAACCT 61.184 57.895 15.32 0.00 40.25 3.50
503 504 3.367292 GGACGAAGGGTTTATGTACGTCA 60.367 47.826 16.13 0.00 46.30 4.35
557 558 1.611936 GGGGAAGAACAGAGGAAGTGC 60.612 57.143 0.00 0.00 0.00 4.40
792 794 5.643379 AAACCACACCTACATATGCAAAG 57.357 39.130 1.58 0.00 0.00 2.77
870 872 2.360350 CAAGGTGGTGCTGGCGAT 60.360 61.111 0.00 0.00 0.00 4.58
1019 1025 2.033141 AAGGACGAGGACCGACGA 59.967 61.111 18.00 0.00 41.76 4.20
1026 1032 3.181479 CCGAATCATAACAAGGACGAGGA 60.181 47.826 0.00 0.00 0.00 3.71
1175 1182 9.720769 TCTTTCAACTAAATTTAACCTCTCGAT 57.279 29.630 0.00 0.00 0.00 3.59
1374 1381 8.522830 CAACTAAGGTAACAATTGATCCAACAT 58.477 33.333 13.59 0.00 41.41 2.71
1585 1592 5.772825 AAGTATGCACGCCATTAATGAAT 57.227 34.783 17.23 0.00 35.34 2.57
1711 1718 3.248024 ACCAGACTCAAATAGGTGGACA 58.752 45.455 0.00 0.00 37.05 4.02
1766 1773 4.635473 TCCATCATAACCCCTCTTTCTCT 58.365 43.478 0.00 0.00 0.00 3.10
1837 1844 6.705825 CCATTGTTGTATCATCGTATTCAGGA 59.294 38.462 0.00 0.00 0.00 3.86
1879 1886 1.164411 TAGCTTGTTCCCACATTGCG 58.836 50.000 0.00 0.00 37.63 4.85
1898 1905 3.543665 GCTCATCTGATGCCTCTTCTTT 58.456 45.455 12.78 0.00 0.00 2.52
1922 1929 1.333177 GCCCGACCTAGATCATCAGT 58.667 55.000 0.00 0.00 0.00 3.41
1987 1994 1.879380 TCTAACATGCGCTGCAACTTT 59.121 42.857 9.73 4.29 43.62 2.66
2031 2038 3.706802 TTTTGTCAGCTTCGCAATTCA 57.293 38.095 0.00 0.00 0.00 2.57
2092 2099 3.743521 TCCATTGCCATCCTTATTCTCG 58.256 45.455 0.00 0.00 0.00 4.04
2099 2106 0.178981 CCCGATCCATTGCCATCCTT 60.179 55.000 0.00 0.00 0.00 3.36
2100 2107 1.355718 ACCCGATCCATTGCCATCCT 61.356 55.000 0.00 0.00 0.00 3.24
2101 2108 0.468029 AACCCGATCCATTGCCATCC 60.468 55.000 0.00 0.00 0.00 3.51
2102 2109 0.954452 GAACCCGATCCATTGCCATC 59.046 55.000 0.00 0.00 0.00 3.51
2103 2110 0.819259 CGAACCCGATCCATTGCCAT 60.819 55.000 0.00 0.00 38.22 4.40
2104 2111 1.451207 CGAACCCGATCCATTGCCA 60.451 57.895 0.00 0.00 38.22 4.92
2105 2112 2.186826 CCGAACCCGATCCATTGCC 61.187 63.158 0.00 0.00 38.22 4.52
2106 2113 2.834618 GCCGAACCCGATCCATTGC 61.835 63.158 0.00 0.00 38.22 3.56
2107 2114 2.186826 GGCCGAACCCGATCCATTG 61.187 63.158 0.00 0.00 38.22 2.82
2108 2115 2.192175 GGCCGAACCCGATCCATT 59.808 61.111 0.00 0.00 38.22 3.16
2117 2124 4.646877 TTCAACCCGGGCCGAACC 62.647 66.667 30.79 0.00 37.93 3.62
2118 2125 3.359523 GTTCAACCCGGGCCGAAC 61.360 66.667 29.69 29.69 0.00 3.95
2119 2126 2.700407 ATTGTTCAACCCGGGCCGAA 62.700 55.000 30.79 20.91 0.00 4.30
2120 2127 1.839148 TATTGTTCAACCCGGGCCGA 61.839 55.000 30.79 15.32 0.00 5.54
2121 2128 0.750182 ATATTGTTCAACCCGGGCCG 60.750 55.000 24.08 21.46 0.00 6.13
2122 2129 2.351706 TATATTGTTCAACCCGGGCC 57.648 50.000 24.08 3.85 0.00 5.80
2123 2130 4.722361 TTTTATATTGTTCAACCCGGGC 57.278 40.909 24.08 3.75 0.00 6.13
2124 2131 5.361285 TGGATTTTATATTGTTCAACCCGGG 59.639 40.000 22.25 22.25 0.00 5.73
2125 2132 6.458232 TGGATTTTATATTGTTCAACCCGG 57.542 37.500 0.00 0.00 0.00 5.73
2126 2133 9.840427 GATATGGATTTTATATTGTTCAACCCG 57.160 33.333 0.00 0.00 0.00 5.28
2140 2147 9.880254 TCTTCATGGATTTGGATATGGATTTTA 57.120 29.630 0.00 0.00 0.00 1.52
2141 2148 8.645110 GTCTTCATGGATTTGGATATGGATTTT 58.355 33.333 0.00 0.00 0.00 1.82
2142 2149 7.785985 TGTCTTCATGGATTTGGATATGGATTT 59.214 33.333 0.00 0.00 0.00 2.17
2143 2150 7.299896 TGTCTTCATGGATTTGGATATGGATT 58.700 34.615 0.00 0.00 0.00 3.01
2144 2151 6.855667 TGTCTTCATGGATTTGGATATGGAT 58.144 36.000 0.00 0.00 0.00 3.41
2145 2152 6.264771 TGTCTTCATGGATTTGGATATGGA 57.735 37.500 0.00 0.00 0.00 3.41
2146 2153 7.534723 AATGTCTTCATGGATTTGGATATGG 57.465 36.000 0.00 0.00 34.19 2.74
2148 2155 9.818270 ACATAATGTCTTCATGGATTTGGATAT 57.182 29.630 0.00 0.00 34.19 1.63
2149 2156 9.070179 CACATAATGTCTTCATGGATTTGGATA 57.930 33.333 0.00 0.00 34.19 2.59
2150 2157 7.470981 GCACATAATGTCTTCATGGATTTGGAT 60.471 37.037 0.00 0.00 34.19 3.41
2151 2158 6.183360 GCACATAATGTCTTCATGGATTTGGA 60.183 38.462 0.00 0.00 34.19 3.53
2152 2159 5.981315 GCACATAATGTCTTCATGGATTTGG 59.019 40.000 0.00 0.00 34.19 3.28
2153 2160 5.981315 GGCACATAATGTCTTCATGGATTTG 59.019 40.000 0.00 0.00 34.19 2.32
2154 2161 5.069516 GGGCACATAATGTCTTCATGGATTT 59.930 40.000 0.00 0.00 34.19 2.17
2155 2162 4.586001 GGGCACATAATGTCTTCATGGATT 59.414 41.667 0.00 0.00 34.19 3.01
2156 2163 4.147321 GGGCACATAATGTCTTCATGGAT 58.853 43.478 0.00 0.00 34.19 3.41
2157 2164 3.554934 GGGCACATAATGTCTTCATGGA 58.445 45.455 0.00 0.00 34.19 3.41
2158 2165 2.291465 CGGGCACATAATGTCTTCATGG 59.709 50.000 0.00 0.00 34.19 3.66
2159 2166 2.945008 ACGGGCACATAATGTCTTCATG 59.055 45.455 0.00 0.00 34.19 3.07
2160 2167 3.206150 GACGGGCACATAATGTCTTCAT 58.794 45.455 0.00 0.00 35.59 2.57
2161 2168 2.627945 GACGGGCACATAATGTCTTCA 58.372 47.619 0.00 0.00 31.57 3.02
2162 2169 1.940613 GGACGGGCACATAATGTCTTC 59.059 52.381 0.00 0.00 31.57 2.87
2163 2170 1.280710 TGGACGGGCACATAATGTCTT 59.719 47.619 0.00 0.00 31.57 3.01
2164 2171 0.908910 TGGACGGGCACATAATGTCT 59.091 50.000 0.00 0.00 31.57 3.41
2165 2172 1.603802 CATGGACGGGCACATAATGTC 59.396 52.381 0.00 0.00 0.00 3.06
2166 2173 1.211703 TCATGGACGGGCACATAATGT 59.788 47.619 0.00 0.00 0.00 2.71
2167 2174 1.965935 TCATGGACGGGCACATAATG 58.034 50.000 0.00 0.00 0.00 1.90
2168 2175 2.727123 TTCATGGACGGGCACATAAT 57.273 45.000 0.00 0.00 0.00 1.28
2169 2176 2.498644 TTTCATGGACGGGCACATAA 57.501 45.000 0.00 0.00 0.00 1.90
2170 2177 2.498644 TTTTCATGGACGGGCACATA 57.501 45.000 0.00 0.00 0.00 2.29
2171 2178 1.626686 TTTTTCATGGACGGGCACAT 58.373 45.000 0.00 0.00 0.00 3.21
2172 2179 1.543802 GATTTTTCATGGACGGGCACA 59.456 47.619 0.00 0.00 0.00 4.57
2173 2180 1.135112 GGATTTTTCATGGACGGGCAC 60.135 52.381 0.00 0.00 0.00 5.01
2174 2181 1.181786 GGATTTTTCATGGACGGGCA 58.818 50.000 0.00 0.00 0.00 5.36
2175 2182 1.181786 TGGATTTTTCATGGACGGGC 58.818 50.000 0.00 0.00 0.00 6.13
2176 2183 3.441496 CATGGATTTTTCATGGACGGG 57.559 47.619 0.00 0.00 38.55 5.28
2182 2189 3.523606 TTCGCCCATGGATTTTTCATG 57.476 42.857 15.22 0.00 41.04 3.07
2183 2190 4.550076 TTTTCGCCCATGGATTTTTCAT 57.450 36.364 15.22 0.00 0.00 2.57
2184 2191 4.061596 GTTTTTCGCCCATGGATTTTTCA 58.938 39.130 15.22 0.00 0.00 2.69
2185 2192 4.061596 TGTTTTTCGCCCATGGATTTTTC 58.938 39.130 15.22 0.00 0.00 2.29
2186 2193 4.078639 TGTTTTTCGCCCATGGATTTTT 57.921 36.364 15.22 0.00 0.00 1.94
2187 2194 3.760580 TGTTTTTCGCCCATGGATTTT 57.239 38.095 15.22 0.00 0.00 1.82
2188 2195 3.760580 TTGTTTTTCGCCCATGGATTT 57.239 38.095 15.22 0.00 0.00 2.17
2189 2196 3.007831 ACATTGTTTTTCGCCCATGGATT 59.992 39.130 15.22 0.00 0.00 3.01
2190 2197 2.566724 ACATTGTTTTTCGCCCATGGAT 59.433 40.909 15.22 0.00 0.00 3.41
2191 2198 1.967066 ACATTGTTTTTCGCCCATGGA 59.033 42.857 15.22 0.00 0.00 3.41
2192 2199 2.336667 GACATTGTTTTTCGCCCATGG 58.663 47.619 4.14 4.14 0.00 3.66
2193 2200 2.288702 TGGACATTGTTTTTCGCCCATG 60.289 45.455 0.00 0.00 0.00 3.66
2194 2201 1.967066 TGGACATTGTTTTTCGCCCAT 59.033 42.857 0.00 0.00 0.00 4.00
2195 2202 1.403814 TGGACATTGTTTTTCGCCCA 58.596 45.000 0.00 0.00 0.00 5.36
2196 2203 2.288763 ACATGGACATTGTTTTTCGCCC 60.289 45.455 0.00 0.00 0.00 6.13
2197 2204 2.986479 GACATGGACATTGTTTTTCGCC 59.014 45.455 0.00 0.00 0.00 5.54
2198 2205 2.986479 GGACATGGACATTGTTTTTCGC 59.014 45.455 0.00 0.00 0.00 4.70
2199 2206 4.235939 TGGACATGGACATTGTTTTTCG 57.764 40.909 0.00 0.00 0.00 3.46
2200 2207 5.236263 GGTTTGGACATGGACATTGTTTTTC 59.764 40.000 0.00 0.00 0.00 2.29
2201 2208 5.122519 GGTTTGGACATGGACATTGTTTTT 58.877 37.500 0.00 0.00 0.00 1.94
2202 2209 4.444164 GGGTTTGGACATGGACATTGTTTT 60.444 41.667 0.00 0.00 0.00 2.43
2203 2210 3.070878 GGGTTTGGACATGGACATTGTTT 59.929 43.478 0.00 0.00 0.00 2.83
2204 2211 2.632512 GGGTTTGGACATGGACATTGTT 59.367 45.455 0.00 0.00 0.00 2.83
2205 2212 2.247358 GGGTTTGGACATGGACATTGT 58.753 47.619 0.00 0.00 0.00 2.71
2206 2213 1.202114 CGGGTTTGGACATGGACATTG 59.798 52.381 0.00 0.00 0.00 2.82
2207 2214 1.074727 TCGGGTTTGGACATGGACATT 59.925 47.619 0.00 0.00 0.00 2.71
2208 2215 0.695924 TCGGGTTTGGACATGGACAT 59.304 50.000 0.00 0.00 0.00 3.06
2209 2216 0.695924 ATCGGGTTTGGACATGGACA 59.304 50.000 0.00 0.00 0.00 4.02
2210 2217 1.094785 CATCGGGTTTGGACATGGAC 58.905 55.000 0.00 0.00 0.00 4.02
2211 2218 0.988063 TCATCGGGTTTGGACATGGA 59.012 50.000 0.00 0.00 0.00 3.41
2212 2219 2.057137 ATCATCGGGTTTGGACATGG 57.943 50.000 0.00 0.00 0.00 3.66
2213 2220 3.753272 GGATATCATCGGGTTTGGACATG 59.247 47.826 4.83 0.00 0.00 3.21
2214 2221 3.394274 TGGATATCATCGGGTTTGGACAT 59.606 43.478 4.83 0.00 0.00 3.06
2215 2222 2.774809 TGGATATCATCGGGTTTGGACA 59.225 45.455 4.83 0.00 0.00 4.02
2216 2223 3.485463 TGGATATCATCGGGTTTGGAC 57.515 47.619 4.83 0.00 0.00 4.02
2217 2224 4.286297 GATGGATATCATCGGGTTTGGA 57.714 45.455 4.83 0.00 42.29 3.53
2245 2252 3.698289 TGAGAGTACCCGATGGATATCC 58.302 50.000 15.39 15.39 34.81 2.59
2246 2253 4.523173 TGTTGAGAGTACCCGATGGATATC 59.477 45.833 0.00 0.00 34.81 1.63
2247 2254 4.281182 GTGTTGAGAGTACCCGATGGATAT 59.719 45.833 0.00 0.00 34.81 1.63
2248 2255 3.635373 GTGTTGAGAGTACCCGATGGATA 59.365 47.826 0.00 0.00 34.81 2.59
2249 2256 2.431057 GTGTTGAGAGTACCCGATGGAT 59.569 50.000 0.00 0.00 34.81 3.41
2250 2257 1.822990 GTGTTGAGAGTACCCGATGGA 59.177 52.381 0.00 0.00 34.81 3.41
2251 2258 1.469251 CGTGTTGAGAGTACCCGATGG 60.469 57.143 0.00 0.00 37.80 3.51
2252 2259 1.201647 ACGTGTTGAGAGTACCCGATG 59.798 52.381 0.00 0.00 0.00 3.84
2253 2260 1.542492 ACGTGTTGAGAGTACCCGAT 58.458 50.000 0.00 0.00 0.00 4.18
2254 2261 2.183478 TACGTGTTGAGAGTACCCGA 57.817 50.000 0.00 0.00 0.00 5.14
2255 2262 3.374988 TGTATACGTGTTGAGAGTACCCG 59.625 47.826 0.00 0.00 0.00 5.28
2256 2263 4.970662 TGTATACGTGTTGAGAGTACCC 57.029 45.455 0.00 0.00 0.00 3.69
2275 2282 9.571810 CACTTGTGTGCAATGTTTTATATATGT 57.428 29.630 0.00 0.00 37.38 2.29
2292 2299 3.181498 TGTGAATCTTGTGCACTTGTGTG 60.181 43.478 19.41 2.02 46.37 3.82
2293 2300 3.016031 TGTGAATCTTGTGCACTTGTGT 58.984 40.909 19.41 0.10 33.83 3.72
2294 2301 3.696281 TGTGAATCTTGTGCACTTGTG 57.304 42.857 19.41 5.57 33.83 3.33
2295 2302 5.764686 TCTTATGTGAATCTTGTGCACTTGT 59.235 36.000 19.41 0.00 33.83 3.16
2296 2303 6.245115 TCTTATGTGAATCTTGTGCACTTG 57.755 37.500 19.41 10.70 33.83 3.16
2297 2304 6.883217 AGATCTTATGTGAATCTTGTGCACTT 59.117 34.615 19.41 3.21 33.83 3.16
2298 2305 6.413052 AGATCTTATGTGAATCTTGTGCACT 58.587 36.000 19.41 0.00 33.83 4.40
2299 2306 6.314648 TGAGATCTTATGTGAATCTTGTGCAC 59.685 38.462 10.75 10.75 0.00 4.57
2300 2307 6.408869 TGAGATCTTATGTGAATCTTGTGCA 58.591 36.000 0.00 0.00 0.00 4.57
2301 2308 6.915544 TGAGATCTTATGTGAATCTTGTGC 57.084 37.500 0.00 0.00 0.00 4.57
2316 2323 9.434420 TGTTGTTTTGTGAAAATTTGAGATCTT 57.566 25.926 0.00 0.00 32.22 2.40
2317 2324 9.603921 ATGTTGTTTTGTGAAAATTTGAGATCT 57.396 25.926 0.00 0.00 32.22 2.75
2320 2327 8.816144 GCTATGTTGTTTTGTGAAAATTTGAGA 58.184 29.630 0.00 0.00 32.22 3.27
2321 2328 8.819974 AGCTATGTTGTTTTGTGAAAATTTGAG 58.180 29.630 0.00 0.00 32.22 3.02
2322 2329 8.715191 AGCTATGTTGTTTTGTGAAAATTTGA 57.285 26.923 0.00 0.00 32.22 2.69
2323 2330 8.602328 TGAGCTATGTTGTTTTGTGAAAATTTG 58.398 29.630 0.00 0.00 32.22 2.32
2324 2331 8.715191 TGAGCTATGTTGTTTTGTGAAAATTT 57.285 26.923 0.00 0.00 32.22 1.82
2325 2332 8.715191 TTGAGCTATGTTGTTTTGTGAAAATT 57.285 26.923 0.00 0.00 32.22 1.82
2326 2333 7.981225 ACTTGAGCTATGTTGTTTTGTGAAAAT 59.019 29.630 0.00 0.00 32.22 1.82
2327 2334 7.275341 CACTTGAGCTATGTTGTTTTGTGAAAA 59.725 33.333 0.00 0.00 0.00 2.29
2328 2335 6.751425 CACTTGAGCTATGTTGTTTTGTGAAA 59.249 34.615 0.00 0.00 0.00 2.69
2329 2336 6.264832 CACTTGAGCTATGTTGTTTTGTGAA 58.735 36.000 0.00 0.00 0.00 3.18
2330 2337 5.733091 GCACTTGAGCTATGTTGTTTTGTGA 60.733 40.000 0.00 0.00 0.00 3.58
2331 2338 4.442073 GCACTTGAGCTATGTTGTTTTGTG 59.558 41.667 0.00 0.00 0.00 3.33
2332 2339 4.097741 TGCACTTGAGCTATGTTGTTTTGT 59.902 37.500 0.00 0.00 34.99 2.83
2333 2340 4.442073 GTGCACTTGAGCTATGTTGTTTTG 59.558 41.667 10.32 0.00 34.99 2.44
2334 2341 4.097741 TGTGCACTTGAGCTATGTTGTTTT 59.902 37.500 19.41 0.00 34.99 2.43
2335 2342 3.631686 TGTGCACTTGAGCTATGTTGTTT 59.368 39.130 19.41 0.00 34.99 2.83
2336 2343 3.213506 TGTGCACTTGAGCTATGTTGTT 58.786 40.909 19.41 0.00 34.99 2.83
2337 2344 2.849942 TGTGCACTTGAGCTATGTTGT 58.150 42.857 19.41 0.00 34.99 3.32
2338 2345 3.003585 TGTTGTGCACTTGAGCTATGTTG 59.996 43.478 19.41 0.00 34.99 3.33
2339 2346 3.213506 TGTTGTGCACTTGAGCTATGTT 58.786 40.909 19.41 0.00 34.99 2.71
2340 2347 2.849942 TGTTGTGCACTTGAGCTATGT 58.150 42.857 19.41 0.00 34.99 2.29
2341 2348 3.437741 TGATGTTGTGCACTTGAGCTATG 59.562 43.478 19.41 0.00 34.99 2.23
2342 2349 3.678289 TGATGTTGTGCACTTGAGCTAT 58.322 40.909 19.41 2.95 34.99 2.97
2343 2350 3.124578 TGATGTTGTGCACTTGAGCTA 57.875 42.857 19.41 0.00 34.99 3.32
2344 2351 1.971481 TGATGTTGTGCACTTGAGCT 58.029 45.000 19.41 0.00 34.99 4.09
2345 2352 2.780065 TTGATGTTGTGCACTTGAGC 57.220 45.000 19.41 4.67 0.00 4.26
2346 2353 4.862350 TGATTTGATGTTGTGCACTTGAG 58.138 39.130 19.41 0.00 0.00 3.02
2347 2354 4.915158 TGATTTGATGTTGTGCACTTGA 57.085 36.364 19.41 1.28 0.00 3.02
2348 2355 5.466819 AGATGATTTGATGTTGTGCACTTG 58.533 37.500 19.41 0.00 0.00 3.16
2349 2356 5.717078 AGATGATTTGATGTTGTGCACTT 57.283 34.783 19.41 0.00 0.00 3.16
2350 2357 5.475909 AGAAGATGATTTGATGTTGTGCACT 59.524 36.000 19.41 0.00 0.00 4.40
2351 2358 5.706916 AGAAGATGATTTGATGTTGTGCAC 58.293 37.500 10.75 10.75 0.00 4.57
2352 2359 5.970317 AGAAGATGATTTGATGTTGTGCA 57.030 34.783 0.00 0.00 0.00 4.57
2353 2360 7.312657 TCTAGAAGATGATTTGATGTTGTGC 57.687 36.000 0.00 0.00 0.00 4.57
2354 2361 9.932699 GAATCTAGAAGATGATTTGATGTTGTG 57.067 33.333 0.00 0.00 34.65 3.33
2355 2362 9.902684 AGAATCTAGAAGATGATTTGATGTTGT 57.097 29.630 0.00 0.00 34.65 3.32
2377 2384 9.846248 GCACTTTTTATGTCATCTTGTTAGAAT 57.154 29.630 0.00 0.00 33.20 2.40
2378 2385 8.845227 TGCACTTTTTATGTCATCTTGTTAGAA 58.155 29.630 0.00 0.00 33.20 2.10
2379 2386 8.289618 GTGCACTTTTTATGTCATCTTGTTAGA 58.710 33.333 10.32 0.00 34.21 2.10
2380 2387 8.075574 TGTGCACTTTTTATGTCATCTTGTTAG 58.924 33.333 19.41 0.00 0.00 2.34
2381 2388 7.935520 TGTGCACTTTTTATGTCATCTTGTTA 58.064 30.769 19.41 0.00 0.00 2.41
2382 2389 6.804677 TGTGCACTTTTTATGTCATCTTGTT 58.195 32.000 19.41 0.00 0.00 2.83
2383 2390 6.389830 TGTGCACTTTTTATGTCATCTTGT 57.610 33.333 19.41 0.00 0.00 3.16
2384 2391 7.061441 GTGATGTGCACTTTTTATGTCATCTTG 59.939 37.037 19.41 0.00 44.27 3.02
2385 2392 7.086376 GTGATGTGCACTTTTTATGTCATCTT 58.914 34.615 19.41 0.00 44.27 2.40
2386 2393 6.349611 GGTGATGTGCACTTTTTATGTCATCT 60.350 38.462 19.41 0.00 46.86 2.90
2387 2394 5.801947 GGTGATGTGCACTTTTTATGTCATC 59.198 40.000 19.41 8.86 46.86 2.92
2388 2395 5.243507 TGGTGATGTGCACTTTTTATGTCAT 59.756 36.000 19.41 0.00 46.86 3.06
2389 2396 4.582240 TGGTGATGTGCACTTTTTATGTCA 59.418 37.500 19.41 6.54 46.86 3.58
2390 2397 5.119931 TGGTGATGTGCACTTTTTATGTC 57.880 39.130 19.41 4.16 46.86 3.06
2391 2398 5.528043 TTGGTGATGTGCACTTTTTATGT 57.472 34.783 19.41 0.00 46.86 2.29
2392 2399 5.752472 TGTTTGGTGATGTGCACTTTTTATG 59.248 36.000 19.41 0.00 46.86 1.90
2393 2400 5.911752 TGTTTGGTGATGTGCACTTTTTAT 58.088 33.333 19.41 1.80 46.86 1.40
2394 2401 5.330455 TGTTTGGTGATGTGCACTTTTTA 57.670 34.783 19.41 0.00 46.86 1.52
2395 2402 4.199432 TGTTTGGTGATGTGCACTTTTT 57.801 36.364 19.41 0.00 46.86 1.94
2396 2403 3.883830 TGTTTGGTGATGTGCACTTTT 57.116 38.095 19.41 2.55 46.86 2.27
2397 2404 3.883830 TTGTTTGGTGATGTGCACTTT 57.116 38.095 19.41 5.40 46.86 2.66
2398 2405 3.638160 AGATTGTTTGGTGATGTGCACTT 59.362 39.130 19.41 12.28 46.86 3.16
2399 2406 3.225104 AGATTGTTTGGTGATGTGCACT 58.775 40.909 19.41 3.19 46.86 4.40
2400 2407 3.254166 AGAGATTGTTTGGTGATGTGCAC 59.746 43.478 10.75 10.75 46.98 4.57
2401 2408 3.489355 AGAGATTGTTTGGTGATGTGCA 58.511 40.909 0.00 0.00 0.00 4.57
2402 2409 3.503363 TGAGAGATTGTTTGGTGATGTGC 59.497 43.478 0.00 0.00 0.00 4.57
2403 2410 5.694231 TTGAGAGATTGTTTGGTGATGTG 57.306 39.130 0.00 0.00 0.00 3.21
2404 2411 6.906157 ATTTGAGAGATTGTTTGGTGATGT 57.094 33.333 0.00 0.00 0.00 3.06
2405 2412 7.600065 AGAATTTGAGAGATTGTTTGGTGATG 58.400 34.615 0.00 0.00 0.00 3.07
2406 2413 7.449395 TGAGAATTTGAGAGATTGTTTGGTGAT 59.551 33.333 0.00 0.00 0.00 3.06
2407 2414 6.772233 TGAGAATTTGAGAGATTGTTTGGTGA 59.228 34.615 0.00 0.00 0.00 4.02
2408 2415 6.860023 GTGAGAATTTGAGAGATTGTTTGGTG 59.140 38.462 0.00 0.00 0.00 4.17
2409 2416 6.547141 TGTGAGAATTTGAGAGATTGTTTGGT 59.453 34.615 0.00 0.00 0.00 3.67
2410 2417 6.973843 TGTGAGAATTTGAGAGATTGTTTGG 58.026 36.000 0.00 0.00 0.00 3.28
2411 2418 8.294577 TGATGTGAGAATTTGAGAGATTGTTTG 58.705 33.333 0.00 0.00 0.00 2.93
2412 2419 8.295288 GTGATGTGAGAATTTGAGAGATTGTTT 58.705 33.333 0.00 0.00 0.00 2.83
2413 2420 7.094463 GGTGATGTGAGAATTTGAGAGATTGTT 60.094 37.037 0.00 0.00 0.00 2.83
2414 2421 6.373774 GGTGATGTGAGAATTTGAGAGATTGT 59.626 38.462 0.00 0.00 0.00 2.71
2415 2422 6.373495 TGGTGATGTGAGAATTTGAGAGATTG 59.627 38.462 0.00 0.00 0.00 2.67
2416 2423 6.479006 TGGTGATGTGAGAATTTGAGAGATT 58.521 36.000 0.00 0.00 0.00 2.40
2417 2424 6.058553 TGGTGATGTGAGAATTTGAGAGAT 57.941 37.500 0.00 0.00 0.00 2.75
2418 2425 5.488262 TGGTGATGTGAGAATTTGAGAGA 57.512 39.130 0.00 0.00 0.00 3.10
2419 2426 6.564709 TTTGGTGATGTGAGAATTTGAGAG 57.435 37.500 0.00 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.