Multiple sequence alignment - TraesCS3B01G474300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G474300 chr3B 100.000 3755 0 0 1 3755 723455408 723451654 0.000000e+00 6935.0
1 TraesCS3B01G474300 chr3B 96.721 61 2 0 3376 3436 791278182 791278242 6.640000e-18 102.0
2 TraesCS3B01G474300 chr3B 92.537 67 4 1 3378 3444 656873496 656873431 1.110000e-15 95.3
3 TraesCS3B01G474300 chr3A 91.645 2322 122 30 176 2466 683196796 683194516 0.000000e+00 3147.0
4 TraesCS3B01G474300 chr3A 89.046 283 20 5 3074 3348 683193720 683193441 1.290000e-89 340.0
5 TraesCS3B01G474300 chr3A 92.276 246 8 8 2548 2789 683194517 683194279 4.650000e-89 339.0
6 TraesCS3B01G474300 chr3A 95.918 98 4 0 1 98 683199011 683198914 3.880000e-35 159.0
7 TraesCS3B01G474300 chr3A 94.898 98 5 0 92 189 683198884 683198787 1.810000e-33 154.0
8 TraesCS3B01G474300 chr3D 91.340 2067 127 23 413 2466 546340744 546338717 0.000000e+00 2778.0
9 TraesCS3B01G474300 chr3D 81.555 553 63 25 2548 3071 546338718 546338176 1.610000e-113 420.0
10 TraesCS3B01G474300 chr3D 90.426 282 17 4 3074 3347 546337923 546337644 2.760000e-96 363.0
11 TraesCS3B01G474300 chr3D 94.527 201 11 0 976 1176 546342251 546342051 1.010000e-80 311.0
12 TraesCS3B01G474300 chr3D 86.765 136 15 3 193 325 546341185 546341050 8.400000e-32 148.0
13 TraesCS3B01G474300 chr3D 96.774 62 2 0 3376 3437 14038336 14038275 1.840000e-18 104.0
14 TraesCS3B01G474300 chr3D 100.000 37 0 0 93 129 546341227 546341191 6.730000e-08 69.4
15 TraesCS3B01G474300 chr7B 95.935 123 5 0 3544 3666 189557095 189557217 2.290000e-47 200.0
16 TraesCS3B01G474300 chr7B 91.057 123 8 2 3544 3665 153273042 153272922 3.000000e-36 163.0
17 TraesCS3B01G474300 chr7B 96.721 61 2 0 3376 3436 189557038 189557098 6.640000e-18 102.0
18 TraesCS3B01G474300 chr6B 94.309 123 7 0 3544 3666 194932468 194932590 4.950000e-44 189.0
19 TraesCS3B01G474300 chr6B 93.277 119 6 2 3443 3559 635179785 635179667 1.390000e-39 174.0
20 TraesCS3B01G474300 chr6B 95.918 98 1 2 2456 2551 216509852 216509756 5.020000e-34 156.0
21 TraesCS3B01G474300 chr6B 90.678 118 9 2 3550 3667 623336354 623336469 5.020000e-34 156.0
22 TraesCS3B01G474300 chr6B 98.305 59 1 0 3378 3436 194932413 194932471 1.840000e-18 104.0
23 TraesCS3B01G474300 chr5A 98.131 107 2 0 3443 3549 681459093 681458987 1.780000e-43 187.0
24 TraesCS3B01G474300 chr6A 98.095 105 2 0 3443 3547 147336780 147336884 2.300000e-42 183.0
25 TraesCS3B01G474300 chr1D 98.095 105 2 0 3443 3547 368493709 368493813 2.300000e-42 183.0
26 TraesCS3B01G474300 chr1D 91.589 107 8 1 2443 2549 295954195 295954300 3.020000e-31 147.0
27 TraesCS3B01G474300 chr5B 97.196 107 3 0 3443 3549 476637963 476638069 8.290000e-42 182.0
28 TraesCS3B01G474300 chr5B 97.196 107 3 0 3443 3549 711837054 711836948 8.290000e-42 182.0
29 TraesCS3B01G474300 chr5B 94.949 99 5 0 2458 2556 478751899 478751801 5.020000e-34 156.0
30 TraesCS3B01G474300 chr4A 97.222 108 2 1 3443 3549 735831743 735831636 8.290000e-42 182.0
31 TraesCS3B01G474300 chr1B 96.364 110 3 1 3443 3552 482450593 482450485 2.980000e-41 180.0
32 TraesCS3B01G474300 chr1B 96.364 110 3 1 3443 3552 633109428 633109536 2.980000e-41 180.0
33 TraesCS3B01G474300 chr7A 96.842 95 3 0 2458 2552 477234939 477234845 3.880000e-35 159.0
34 TraesCS3B01G474300 chr4B 91.453 117 8 2 3550 3666 218904537 218904423 3.880000e-35 159.0
35 TraesCS3B01G474300 chr4B 95.000 100 4 1 2461 2560 491017637 491017735 5.020000e-34 156.0
36 TraesCS3B01G474300 chr4B 90.265 113 9 2 3550 3662 581896675 581896785 3.020000e-31 147.0
37 TraesCS3B01G474300 chr7D 96.809 94 3 0 2456 2549 141292079 141292172 1.400000e-34 158.0
38 TraesCS3B01G474300 chr7D 89.831 118 10 2 3550 3667 376443426 376443541 2.340000e-32 150.0
39 TraesCS3B01G474300 chr7D 98.246 57 1 0 3378 3434 398853793 398853737 2.390000e-17 100.0
40 TraesCS3B01G474300 chr6D 95.960 99 1 2 2465 2561 168293755 168293852 1.400000e-34 158.0
41 TraesCS3B01G474300 chr6D 90.179 112 11 0 3559 3670 297142109 297141998 3.020000e-31 147.0
42 TraesCS3B01G474300 chr6D 96.610 59 2 0 3378 3436 14302319 14302261 8.580000e-17 99.0
43 TraesCS3B01G474300 chr2D 96.809 94 3 0 2465 2558 164992768 164992675 1.400000e-34 158.0
44 TraesCS3B01G474300 chr2D 89.167 120 11 2 3550 3669 9766114 9766231 8.400000e-32 148.0
45 TraesCS3B01G474300 chr2B 95.050 101 3 2 2461 2560 362021229 362021130 1.400000e-34 158.0
46 TraesCS3B01G474300 chr2B 96.721 61 2 0 3376 3436 40438465 40438525 6.640000e-18 102.0
47 TraesCS3B01G474300 chr5D 96.667 60 2 0 3377 3436 419794939 419794880 2.390000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G474300 chr3B 723451654 723455408 3754 True 6935.000000 6935 100.000000 1 3755 1 chr3B.!!$R2 3754
1 TraesCS3B01G474300 chr3A 683193441 683199011 5570 True 827.800000 3147 92.756600 1 3348 5 chr3A.!!$R1 3347
2 TraesCS3B01G474300 chr3D 546337644 546342251 4607 True 681.566667 2778 90.768833 93 3347 6 chr3D.!!$R2 3254

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 58 0.176680 AGCAGGCTATGGTGTTCGAG 59.823 55.0 0.00 0.0 38.49 4.04 F
141 1074 0.235665 GTGTCGTGTCAGCATTGTGG 59.764 55.0 0.00 0.0 0.00 4.17 F
1772 4968 0.101399 GTCGACACGGATGATGAGCT 59.899 55.0 11.55 0.0 0.00 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1668 4864 0.325933 CCACAATCTGCCTGGTCTCA 59.674 55.0 0.00 0.0 0.00 3.27 R
1914 5110 0.974383 TCGGGTTCTTCTTCTCCCAC 59.026 55.0 0.00 0.0 39.87 4.61 R
3522 7037 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.0 44.66 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 0.176680 AGCAGGCTATGGTGTTCGAG 59.823 55.000 0.00 0.00 38.49 4.04
91 92 8.885722 ACACGTATACGATAAAATTTGAACCAT 58.114 29.630 30.77 0.00 43.02 3.55
92 93 9.710979 CACGTATACGATAAAATTTGAACCATT 57.289 29.630 30.77 0.00 43.02 3.16
93 94 9.925268 ACGTATACGATAAAATTTGAACCATTC 57.075 29.630 30.77 0.00 43.02 2.67
129 1062 2.400399 ACGTTCCATGTTAGTGTCGTG 58.600 47.619 0.00 0.00 0.00 4.35
130 1063 2.223876 ACGTTCCATGTTAGTGTCGTGT 60.224 45.455 0.00 0.00 0.00 4.49
141 1074 0.235665 GTGTCGTGTCAGCATTGTGG 59.764 55.000 0.00 0.00 0.00 4.17
152 1085 4.702131 GTCAGCATTGTGGAGGAAAGTATT 59.298 41.667 0.00 0.00 0.00 1.89
182 3119 4.766891 ACATCATTTTCGATGGTGTTCCTT 59.233 37.500 0.00 0.00 45.87 3.36
243 3180 2.739609 GCAAGCTCCCATATGGCAAAAC 60.740 50.000 16.97 3.51 0.00 2.43
300 3241 1.381872 GGCAGACCCTCCTGAGCTA 60.382 63.158 0.00 0.00 36.29 3.32
322 3263 1.462432 TACTGGCCTGGTGGGTGAA 60.462 57.895 14.82 0.00 37.43 3.18
351 3292 2.428530 CTCTTGGGCCTTAAGAAATGCC 59.571 50.000 19.01 7.98 43.54 4.40
354 3295 1.077005 TGGGCCTTAAGAAATGCCAGT 59.923 47.619 18.53 0.00 45.41 4.00
355 3296 1.751351 GGGCCTTAAGAAATGCCAGTC 59.249 52.381 18.53 2.36 45.41 3.51
357 3298 3.092301 GGCCTTAAGAAATGCCAGTCTT 58.908 45.455 13.71 0.00 43.68 3.01
409 3553 3.054655 AGGTATACTTTGTGGATGGCGTT 60.055 43.478 2.25 0.00 0.00 4.84
411 3555 4.157105 GGTATACTTTGTGGATGGCGTTTT 59.843 41.667 2.25 0.00 0.00 2.43
479 3642 1.883275 CCGTTTGTAGTTTGGATGGCA 59.117 47.619 0.00 0.00 0.00 4.92
494 3657 4.465660 TGGATGGCATTTTAAAGCTGCTTA 59.534 37.500 16.31 0.00 36.18 3.09
556 3720 0.397816 AGTAGCTGGGCCGAGAGAAT 60.398 55.000 20.35 0.83 0.00 2.40
561 3725 2.109181 GGGCCGAGAGAATTCCCG 59.891 66.667 0.65 3.80 0.00 5.14
600 3764 4.096003 GCCCGCTTGGTCTGGCTA 62.096 66.667 0.00 0.00 40.77 3.93
612 3776 1.893801 GTCTGGCTATAGGCGGTGTAT 59.106 52.381 28.71 0.00 45.98 2.29
613 3777 1.893137 TCTGGCTATAGGCGGTGTATG 59.107 52.381 28.71 10.65 45.98 2.39
711 3882 1.410850 TTCCCTGATCTCATCCCCGC 61.411 60.000 0.00 0.00 0.00 6.13
759 3930 4.452733 CGCCGGAACCTCCACCTC 62.453 72.222 5.05 0.00 35.91 3.85
760 3931 4.097361 GCCGGAACCTCCACCTCC 62.097 72.222 5.05 0.00 35.91 4.30
761 3932 2.606519 CCGGAACCTCCACCTCCA 60.607 66.667 0.00 0.00 35.91 3.86
762 3933 2.663196 CGGAACCTCCACCTCCAC 59.337 66.667 0.00 0.00 35.91 4.02
763 3934 2.955881 CGGAACCTCCACCTCCACC 61.956 68.421 0.00 0.00 35.91 4.61
816 3993 3.977244 CCACCAAAGCACCGCCAC 61.977 66.667 0.00 0.00 0.00 5.01
864 4041 0.456824 CGGATCCATATCAGACGCGG 60.457 60.000 12.47 0.00 33.41 6.46
879 4056 0.605589 CGCGGTTCTTTCCTTCCCTT 60.606 55.000 0.00 0.00 0.00 3.95
942 4119 3.948719 GGTTGGACACCGCCTCCA 61.949 66.667 0.00 0.00 35.12 3.86
973 4152 2.111999 CTCCCAGTCACCGCCTCAAA 62.112 60.000 0.00 0.00 0.00 2.69
1137 4333 2.184830 CGAGGCCGAGGACGACATA 61.185 63.158 0.00 0.00 42.66 2.29
1146 4342 1.198178 GAGGACGACATAGATCTCCGC 59.802 57.143 0.00 0.00 0.00 5.54
1279 4475 1.270907 GGAGAACAAGGAGGAGCTCA 58.729 55.000 17.19 0.00 31.08 4.26
1473 4669 2.108566 CAGGAGGATGAGCCGCTG 59.891 66.667 0.00 0.00 43.43 5.18
1668 4864 1.044611 GGCTCGAGGCTAGGAAGATT 58.955 55.000 30.02 0.00 41.46 2.40
1698 4894 2.744494 GCAGATTGTGGTGGAGGAGATC 60.744 54.545 0.00 0.00 0.00 2.75
1772 4968 0.101399 GTCGACACGGATGATGAGCT 59.899 55.000 11.55 0.00 0.00 4.09
2010 5206 1.204113 AGGGTGCCTTCTTCCAGGAG 61.204 60.000 0.00 0.00 35.71 3.69
2011 5207 1.201429 GGGTGCCTTCTTCCAGGAGA 61.201 60.000 0.00 0.00 35.71 3.71
2013 5209 0.980423 GTGCCTTCTTCCAGGAGAGT 59.020 55.000 0.00 0.00 35.71 3.24
2046 5242 2.422127 GAGTCAGTCAGCTGGTAGAGAC 59.578 54.545 15.13 14.31 42.78 3.36
2187 5383 5.243283 ACATCTTGTTAACGAGGACACTACT 59.757 40.000 20.51 0.00 0.00 2.57
2273 5469 3.199677 CCGGCCTGTTTAATTATCGTCA 58.800 45.455 0.00 0.00 0.00 4.35
2315 5514 5.104360 ACATGTGCCATCTATCCACTACTTT 60.104 40.000 0.00 0.00 0.00 2.66
2340 5541 4.009675 CCAGACAATGCTTACTTGCCTAA 58.990 43.478 0.00 0.00 0.00 2.69
2352 5553 6.594159 GCTTACTTGCCTAAATAGAAGACACA 59.406 38.462 0.00 0.00 0.00 3.72
2354 5555 5.246307 ACTTGCCTAAATAGAAGACACACC 58.754 41.667 0.00 0.00 0.00 4.16
2393 5594 5.337169 GCTGAATACTAATAGCCCCTCTCTG 60.337 48.000 0.00 0.00 0.00 3.35
2396 5599 2.965562 ACTAATAGCCCCTCTCTGGTC 58.034 52.381 0.00 0.00 0.00 4.02
2401 5604 1.613630 GCCCCTCTCTGGTCCTTCA 60.614 63.158 0.00 0.00 0.00 3.02
2404 5607 1.488393 CCCCTCTCTGGTCCTTCAATC 59.512 57.143 0.00 0.00 0.00 2.67
2424 5627 0.685458 GGCATGCCTGATTTGTCCCT 60.685 55.000 29.98 0.00 0.00 4.20
2427 5630 2.731572 CATGCCTGATTTGTCCCTCTT 58.268 47.619 0.00 0.00 0.00 2.85
2433 5636 4.559502 GCCTGATTTGTCCCTCTTTTTGTC 60.560 45.833 0.00 0.00 0.00 3.18
2442 5648 5.221925 TGTCCCTCTTTTTGTCATTCTAGCT 60.222 40.000 0.00 0.00 0.00 3.32
2447 5653 7.080724 CCTCTTTTTGTCATTCTAGCTTTGTC 58.919 38.462 0.00 0.00 0.00 3.18
2452 5658 4.183865 TGTCATTCTAGCTTTGTCGATGG 58.816 43.478 0.00 0.00 0.00 3.51
2466 5672 9.382244 GCTTTGTCGATGGTATTTATCAATTAC 57.618 33.333 0.00 0.00 0.00 1.89
2469 5675 8.827177 TGTCGATGGTATTTATCAATTACTCC 57.173 34.615 0.00 0.00 0.00 3.85
2470 5676 7.876068 TGTCGATGGTATTTATCAATTACTCCC 59.124 37.037 0.00 0.00 0.00 4.30
2471 5677 8.095169 GTCGATGGTATTTATCAATTACTCCCT 58.905 37.037 0.00 0.00 0.00 4.20
2472 5678 8.311836 TCGATGGTATTTATCAATTACTCCCTC 58.688 37.037 0.00 0.00 0.00 4.30
2473 5679 7.549488 CGATGGTATTTATCAATTACTCCCTCC 59.451 40.741 0.00 0.00 0.00 4.30
2474 5680 6.765403 TGGTATTTATCAATTACTCCCTCCG 58.235 40.000 0.00 0.00 0.00 4.63
2475 5681 6.328148 TGGTATTTATCAATTACTCCCTCCGT 59.672 38.462 0.00 0.00 0.00 4.69
2476 5682 6.872547 GGTATTTATCAATTACTCCCTCCGTC 59.127 42.308 0.00 0.00 0.00 4.79
2477 5683 4.950205 TTATCAATTACTCCCTCCGTCC 57.050 45.455 0.00 0.00 0.00 4.79
2478 5684 1.492764 TCAATTACTCCCTCCGTCCC 58.507 55.000 0.00 0.00 0.00 4.46
2479 5685 1.200519 CAATTACTCCCTCCGTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
2480 5686 1.768870 CAATTACTCCCTCCGTCCCAT 59.231 52.381 0.00 0.00 0.00 4.00
2481 5687 2.969950 CAATTACTCCCTCCGTCCCATA 59.030 50.000 0.00 0.00 0.00 2.74
2482 5688 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
2483 5689 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
2484 5690 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
2485 5691 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2486 5692 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2487 5693 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2488 5694 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2489 5695 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2490 5696 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
2491 5697 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
2492 5698 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
2493 5699 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
2494 5700 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
2495 5701 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
2496 5702 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
2497 5703 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
2498 5704 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
2499 5705 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
2500 5706 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
2501 5707 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
2502 5708 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
2503 5709 8.612619 CCATAATATAAGAGCGTTTTTGACACT 58.387 33.333 0.00 0.00 0.00 3.55
2506 5712 8.773404 AATATAAGAGCGTTTTTGACACTAGT 57.227 30.769 0.00 0.00 0.00 2.57
2507 5713 4.795970 AAGAGCGTTTTTGACACTAGTG 57.204 40.909 21.44 21.44 0.00 2.74
2509 5715 4.940463 AGAGCGTTTTTGACACTAGTGTA 58.060 39.130 27.98 11.50 45.05 2.90
2510 5716 4.982916 AGAGCGTTTTTGACACTAGTGTAG 59.017 41.667 27.98 13.76 45.05 2.74
2511 5717 4.690122 AGCGTTTTTGACACTAGTGTAGT 58.310 39.130 27.98 6.32 45.05 2.73
2561 5767 3.889538 AGAGGGAGTAGTTTGTTTTTGGC 59.110 43.478 0.00 0.00 0.00 4.52
2563 5769 5.056553 AGGGAGTAGTTTGTTTTTGGCTA 57.943 39.130 0.00 0.00 0.00 3.93
2564 5770 5.451354 AGGGAGTAGTTTGTTTTTGGCTAA 58.549 37.500 0.00 0.00 0.00 3.09
2573 5779 3.536570 TGTTTTTGGCTAAAAAGGGCAC 58.463 40.909 19.59 9.95 44.07 5.01
2580 5786 3.092301 GGCTAAAAAGGGCACTCATTCT 58.908 45.455 0.00 0.00 0.00 2.40
2581 5787 3.119352 GGCTAAAAAGGGCACTCATTCTG 60.119 47.826 0.00 0.00 0.00 3.02
2742 5950 7.059156 AGAAGATGAAGGATTGGGATACAAAG 58.941 38.462 0.00 0.00 43.46 2.77
2764 5972 8.702438 CAAAGCGAGATGATTAAATGTTTGTTT 58.298 29.630 0.00 0.00 0.00 2.83
2765 5973 8.816640 AAGCGAGATGATTAAATGTTTGTTTT 57.183 26.923 0.00 0.00 0.00 2.43
2766 5974 8.231304 AGCGAGATGATTAAATGTTTGTTTTG 57.769 30.769 0.00 0.00 0.00 2.44
2767 5975 7.867403 AGCGAGATGATTAAATGTTTGTTTTGT 59.133 29.630 0.00 0.00 0.00 2.83
2768 5976 8.487176 GCGAGATGATTAAATGTTTGTTTTGTT 58.513 29.630 0.00 0.00 0.00 2.83
2769 5977 9.782028 CGAGATGATTAAATGTTTGTTTTGTTG 57.218 29.630 0.00 0.00 0.00 3.33
2771 5979 8.558700 AGATGATTAAATGTTTGTTTTGTTGGC 58.441 29.630 0.00 0.00 0.00 4.52
2773 5981 8.273780 TGATTAAATGTTTGTTTTGTTGGCTT 57.726 26.923 0.00 0.00 0.00 4.35
2779 5987 2.682155 TGTTTTGTTGGCTTTGACCC 57.318 45.000 0.00 0.00 0.00 4.46
2785 5993 1.073548 TTGGCTTTGACCCGGTACC 59.926 57.895 0.16 0.16 0.00 3.34
2786 5994 1.706995 TTGGCTTTGACCCGGTACCA 61.707 55.000 13.54 0.00 0.00 3.25
2787 5995 1.673337 GGCTTTGACCCGGTACCAC 60.673 63.158 13.54 0.63 0.00 4.16
2788 5996 1.373812 GCTTTGACCCGGTACCACT 59.626 57.895 13.54 0.00 0.00 4.00
2789 5997 0.672711 GCTTTGACCCGGTACCACTC 60.673 60.000 13.54 3.13 0.00 3.51
2790 5998 0.974383 CTTTGACCCGGTACCACTCT 59.026 55.000 13.54 0.00 0.00 3.24
2791 5999 0.971386 TTTGACCCGGTACCACTCTC 59.029 55.000 13.54 0.89 0.00 3.20
2792 6000 0.901580 TTGACCCGGTACCACTCTCC 60.902 60.000 13.54 0.00 0.00 3.71
2793 6001 1.000107 GACCCGGTACCACTCTCCT 60.000 63.158 13.54 0.00 0.00 3.69
2794 6002 0.257039 GACCCGGTACCACTCTCCTA 59.743 60.000 13.54 0.00 0.00 2.94
2795 6003 0.033699 ACCCGGTACCACTCTCCTAC 60.034 60.000 13.54 0.00 0.00 3.18
2796 6004 0.258194 CCCGGTACCACTCTCCTACT 59.742 60.000 13.54 0.00 0.00 2.57
2797 6005 1.492176 CCCGGTACCACTCTCCTACTA 59.508 57.143 13.54 0.00 0.00 1.82
2798 6006 2.570135 CCGGTACCACTCTCCTACTAC 58.430 57.143 13.54 0.00 0.00 2.73
2799 6007 2.570135 CGGTACCACTCTCCTACTACC 58.430 57.143 13.54 0.00 0.00 3.18
2800 6008 2.092753 CGGTACCACTCTCCTACTACCA 60.093 54.545 13.54 0.00 0.00 3.25
2801 6009 3.434739 CGGTACCACTCTCCTACTACCAT 60.435 52.174 13.54 0.00 0.00 3.55
2802 6010 4.202398 CGGTACCACTCTCCTACTACCATA 60.202 50.000 13.54 0.00 0.00 2.74
2803 6011 5.514484 CGGTACCACTCTCCTACTACCATAT 60.514 48.000 13.54 0.00 0.00 1.78
2804 6012 5.711036 GGTACCACTCTCCTACTACCATATG 59.289 48.000 7.15 0.00 0.00 1.78
2805 6013 5.664815 ACCACTCTCCTACTACCATATGA 57.335 43.478 3.65 0.00 0.00 2.15
2806 6014 6.220881 ACCACTCTCCTACTACCATATGAT 57.779 41.667 3.65 0.00 0.00 2.45
2807 6015 6.249951 ACCACTCTCCTACTACCATATGATC 58.750 44.000 3.65 0.00 0.00 2.92
2808 6016 6.183361 ACCACTCTCCTACTACCATATGATCA 60.183 42.308 3.65 0.00 0.00 2.92
2809 6017 6.151985 CCACTCTCCTACTACCATATGATCAC 59.848 46.154 3.65 0.00 0.00 3.06
2810 6018 6.945435 CACTCTCCTACTACCATATGATCACT 59.055 42.308 3.65 0.00 0.00 3.41
2811 6019 8.103935 CACTCTCCTACTACCATATGATCACTA 58.896 40.741 3.65 0.00 0.00 2.74
2818 6026 7.603180 ACTACCATATGATCACTAGCTGAAA 57.397 36.000 3.65 0.00 30.60 2.69
2825 6033 3.691118 TGATCACTAGCTGAAAATGGTGC 59.309 43.478 0.00 0.00 30.60 5.01
2889 6133 7.493645 TGAGACATGTGCTATCATTTAGTCTTG 59.506 37.037 1.15 0.00 32.58 3.02
2894 6138 9.750125 CATGTGCTATCATTTAGTCTTGTACTA 57.250 33.333 0.00 0.00 39.80 1.82
2911 6155 8.359642 TCTTGTACTATCTTGCAAAATGCTTTT 58.640 29.630 0.00 0.00 45.31 2.27
2914 6158 6.695292 ACTATCTTGCAAAATGCTTTTTCG 57.305 33.333 7.31 5.44 45.31 3.46
2920 6164 4.050553 TGCAAAATGCTTTTTCGGAGAAG 58.949 39.130 7.31 0.00 45.31 2.85
2926 6170 8.887036 AAAATGCTTTTTCGGAGAAGTATTTT 57.113 26.923 22.14 22.14 45.12 1.82
2927 6171 7.873739 AATGCTTTTTCGGAGAAGTATTTTG 57.126 32.000 4.70 0.00 45.90 2.44
2954 6198 6.477033 ACATATATGTTTCTGTGACTTCTCGC 59.523 38.462 12.75 0.00 37.90 5.03
2961 6205 2.089349 GTGACTTCTCGCGACAGGC 61.089 63.158 3.71 7.15 38.69 4.85
2974 6218 3.013276 CGACAGGCGCATCTTCTATAA 57.987 47.619 10.83 0.00 0.00 0.98
2981 6233 6.128172 ACAGGCGCATCTTCTATAATATTTGC 60.128 38.462 10.83 0.00 0.00 3.68
2983 6235 6.656693 AGGCGCATCTTCTATAATATTTGCTT 59.343 34.615 10.83 0.00 0.00 3.91
3000 6252 7.951706 ATTTGCTTGAAAATTTTGTCGTTTG 57.048 28.000 8.47 0.00 0.00 2.93
3013 6265 3.250744 TGTCGTTTGCTAGTCATGCTAC 58.749 45.455 0.00 0.00 0.00 3.58
3018 6270 5.023920 CGTTTGCTAGTCATGCTACATTTG 58.976 41.667 0.00 0.00 0.00 2.32
3019 6271 5.390885 CGTTTGCTAGTCATGCTACATTTGT 60.391 40.000 0.00 0.00 0.00 2.83
3035 6287 4.217118 ACATTTGTGTGCTCTTGAGAATCC 59.783 41.667 1.30 0.00 0.00 3.01
3044 6296 7.650104 GTGTGCTCTTGAGAATCCTATAGTAAC 59.350 40.741 1.30 0.00 0.00 2.50
3071 6323 9.088987 AGAATTCCAAGAAAGCCTTAATTTGTA 57.911 29.630 0.65 0.00 32.86 2.41
3072 6324 9.358872 GAATTCCAAGAAAGCCTTAATTTGTAG 57.641 33.333 0.00 0.00 32.86 2.74
3106 6613 4.890158 AGAAAACATAGGCCAAAAAGGG 57.110 40.909 5.01 0.00 38.09 3.95
3120 6630 0.178953 AAAGGGCTCATGTGTGGCTT 60.179 50.000 8.24 0.00 34.96 4.35
3139 6649 4.640201 GGCTTTATTCATAGCTGTTGGACA 59.360 41.667 0.00 0.00 37.54 4.02
3140 6650 5.125417 GGCTTTATTCATAGCTGTTGGACAA 59.875 40.000 0.00 0.00 37.54 3.18
3141 6651 6.183360 GGCTTTATTCATAGCTGTTGGACAAT 60.183 38.462 0.00 0.00 37.54 2.71
3151 6661 5.615289 AGCTGTTGGACAATATGAGATACC 58.385 41.667 0.00 0.00 0.00 2.73
3152 6662 5.367937 AGCTGTTGGACAATATGAGATACCT 59.632 40.000 0.00 0.00 0.00 3.08
3155 6665 5.163205 TGTTGGACAATATGAGATACCTGGG 60.163 44.000 0.00 0.00 0.00 4.45
3185 6695 8.773645 TGTGTTACAGACTAACAGATCAAATTG 58.226 33.333 0.00 0.00 38.01 2.32
3206 6716 5.698741 TGAGGCTATTTCTCCAGAATTCA 57.301 39.130 8.44 0.00 33.54 2.57
3218 6728 5.045651 TCTCCAGAATTCACTGCCTCATTTA 60.046 40.000 8.44 0.00 36.67 1.40
3219 6729 5.188434 TCCAGAATTCACTGCCTCATTTAG 58.812 41.667 8.44 0.00 36.67 1.85
3228 6743 2.821969 CTGCCTCATTTAGTTGCCTGTT 59.178 45.455 0.00 0.00 0.00 3.16
3234 6749 6.350110 GCCTCATTTAGTTGCCTGTTCATTTA 60.350 38.462 0.00 0.00 0.00 1.40
3255 6770 8.755018 CATTTAGTTGTTGTGTTCTTTTCCATC 58.245 33.333 0.00 0.00 0.00 3.51
3266 6781 4.789012 TCTTTTCCATCACCTTCATTGC 57.211 40.909 0.00 0.00 0.00 3.56
3348 6863 1.575447 GGCTGACCAAATCCTCCCCT 61.575 60.000 0.00 0.00 35.26 4.79
3349 6864 0.106967 GCTGACCAAATCCTCCCCTC 60.107 60.000 0.00 0.00 0.00 4.30
3350 6865 0.548510 CTGACCAAATCCTCCCCTCC 59.451 60.000 0.00 0.00 0.00 4.30
3351 6866 0.121197 TGACCAAATCCTCCCCTCCT 59.879 55.000 0.00 0.00 0.00 3.69
3352 6867 0.548510 GACCAAATCCTCCCCTCCTG 59.451 60.000 0.00 0.00 0.00 3.86
3353 6868 0.121197 ACCAAATCCTCCCCTCCTGA 59.879 55.000 0.00 0.00 0.00 3.86
3354 6869 1.298953 CCAAATCCTCCCCTCCTGAA 58.701 55.000 0.00 0.00 0.00 3.02
3355 6870 1.064389 CCAAATCCTCCCCTCCTGAAC 60.064 57.143 0.00 0.00 0.00 3.18
3356 6871 1.918957 CAAATCCTCCCCTCCTGAACT 59.081 52.381 0.00 0.00 0.00 3.01
3357 6872 1.886422 AATCCTCCCCTCCTGAACTC 58.114 55.000 0.00 0.00 0.00 3.01
3358 6873 0.397816 ATCCTCCCCTCCTGAACTCG 60.398 60.000 0.00 0.00 0.00 4.18
3359 6874 1.000486 CCTCCCCTCCTGAACTCGA 60.000 63.158 0.00 0.00 0.00 4.04
3360 6875 1.324005 CCTCCCCTCCTGAACTCGAC 61.324 65.000 0.00 0.00 0.00 4.20
3361 6876 0.323908 CTCCCCTCCTGAACTCGACT 60.324 60.000 0.00 0.00 0.00 4.18
3362 6877 0.612174 TCCCCTCCTGAACTCGACTG 60.612 60.000 0.00 0.00 0.00 3.51
3363 6878 1.216710 CCCTCCTGAACTCGACTGC 59.783 63.158 0.00 0.00 0.00 4.40
3364 6879 1.254284 CCCTCCTGAACTCGACTGCT 61.254 60.000 0.00 0.00 0.00 4.24
3365 6880 0.108898 CCTCCTGAACTCGACTGCTG 60.109 60.000 0.00 0.00 0.00 4.41
3366 6881 0.108898 CTCCTGAACTCGACTGCTGG 60.109 60.000 0.00 0.00 0.00 4.85
3367 6882 1.739562 CCTGAACTCGACTGCTGGC 60.740 63.158 0.00 0.00 0.00 4.85
3368 6883 1.739562 CTGAACTCGACTGCTGGCC 60.740 63.158 0.00 0.00 0.00 5.36
3369 6884 2.435059 GAACTCGACTGCTGGCCC 60.435 66.667 0.00 0.00 0.00 5.80
3370 6885 4.379243 AACTCGACTGCTGGCCCG 62.379 66.667 0.00 0.00 0.00 6.13
3385 6900 3.611674 CCGGTGGGGTTTGTTGCC 61.612 66.667 0.00 0.00 0.00 4.52
3386 6901 2.835431 CGGTGGGGTTTGTTGCCA 60.835 61.111 0.00 0.00 0.00 4.92
3387 6902 2.427245 CGGTGGGGTTTGTTGCCAA 61.427 57.895 0.00 0.00 0.00 4.52
3388 6903 1.908483 GGTGGGGTTTGTTGCCAAA 59.092 52.632 0.00 0.00 38.22 3.28
3389 6904 0.253327 GGTGGGGTTTGTTGCCAAAA 59.747 50.000 0.00 0.00 41.99 2.44
3390 6905 1.340114 GGTGGGGTTTGTTGCCAAAAA 60.340 47.619 0.00 0.00 41.99 1.94
3391 6906 2.649190 GTGGGGTTTGTTGCCAAAAAT 58.351 42.857 0.00 0.00 41.99 1.82
3392 6907 3.020274 GTGGGGTTTGTTGCCAAAAATT 58.980 40.909 0.00 0.00 41.99 1.82
3393 6908 3.019564 TGGGGTTTGTTGCCAAAAATTG 58.980 40.909 0.00 0.00 41.99 2.32
3429 6944 2.908916 GCATTGTGCCAAATATTGCCT 58.091 42.857 0.00 0.00 37.42 4.75
3430 6945 4.057406 GCATTGTGCCAAATATTGCCTA 57.943 40.909 0.00 0.00 37.42 3.93
3431 6946 3.803778 GCATTGTGCCAAATATTGCCTAC 59.196 43.478 0.00 0.00 37.42 3.18
3432 6947 4.441913 GCATTGTGCCAAATATTGCCTACT 60.442 41.667 0.00 0.00 37.42 2.57
3433 6948 5.221224 GCATTGTGCCAAATATTGCCTACTA 60.221 40.000 0.00 0.00 37.42 1.82
3434 6949 5.828299 TTGTGCCAAATATTGCCTACTAC 57.172 39.130 0.00 0.00 0.00 2.73
3435 6950 5.110814 TGTGCCAAATATTGCCTACTACT 57.889 39.130 0.00 0.00 0.00 2.57
3436 6951 5.123227 TGTGCCAAATATTGCCTACTACTC 58.877 41.667 0.00 0.00 0.00 2.59
3437 6952 4.515567 GTGCCAAATATTGCCTACTACTCC 59.484 45.833 0.00 0.00 0.00 3.85
3438 6953 4.072839 GCCAAATATTGCCTACTACTCCC 58.927 47.826 0.00 0.00 0.00 4.30
3439 6954 4.202472 GCCAAATATTGCCTACTACTCCCT 60.202 45.833 0.00 0.00 0.00 4.20
3440 6955 5.552178 CCAAATATTGCCTACTACTCCCTC 58.448 45.833 0.00 0.00 0.00 4.30
3441 6956 5.513267 CCAAATATTGCCTACTACTCCCTCC 60.513 48.000 0.00 0.00 0.00 4.30
3442 6957 1.705873 ATTGCCTACTACTCCCTCCG 58.294 55.000 0.00 0.00 0.00 4.63
3443 6958 0.333993 TTGCCTACTACTCCCTCCGT 59.666 55.000 0.00 0.00 0.00 4.69
3444 6959 0.106819 TGCCTACTACTCCCTCCGTC 60.107 60.000 0.00 0.00 0.00 4.79
3445 6960 0.106819 GCCTACTACTCCCTCCGTCA 60.107 60.000 0.00 0.00 0.00 4.35
3446 6961 1.479021 GCCTACTACTCCCTCCGTCAT 60.479 57.143 0.00 0.00 0.00 3.06
3447 6962 2.506444 CCTACTACTCCCTCCGTCATC 58.494 57.143 0.00 0.00 0.00 2.92
3448 6963 2.158652 CCTACTACTCCCTCCGTCATCA 60.159 54.545 0.00 0.00 0.00 3.07
3449 6964 2.526888 ACTACTCCCTCCGTCATCAA 57.473 50.000 0.00 0.00 0.00 2.57
3450 6965 2.816411 ACTACTCCCTCCGTCATCAAA 58.184 47.619 0.00 0.00 0.00 2.69
3451 6966 3.170717 ACTACTCCCTCCGTCATCAAAA 58.829 45.455 0.00 0.00 0.00 2.44
3452 6967 3.775316 ACTACTCCCTCCGTCATCAAAAT 59.225 43.478 0.00 0.00 0.00 1.82
3453 6968 2.991250 ACTCCCTCCGTCATCAAAATG 58.009 47.619 0.00 0.00 0.00 2.32
3454 6969 2.292267 CTCCCTCCGTCATCAAAATGG 58.708 52.381 0.00 0.00 33.42 3.16
3455 6970 1.912731 TCCCTCCGTCATCAAAATGGA 59.087 47.619 0.00 0.00 33.42 3.41
3456 6971 2.017049 CCCTCCGTCATCAAAATGGAC 58.983 52.381 0.00 0.00 33.42 4.02
3457 6972 2.617788 CCCTCCGTCATCAAAATGGACA 60.618 50.000 0.00 0.00 33.42 4.02
3458 6973 3.081061 CCTCCGTCATCAAAATGGACAA 58.919 45.455 0.00 0.00 33.42 3.18
3459 6974 3.505680 CCTCCGTCATCAAAATGGACAAA 59.494 43.478 0.00 0.00 33.42 2.83
3460 6975 4.022416 CCTCCGTCATCAAAATGGACAAAA 60.022 41.667 0.00 0.00 33.42 2.44
3461 6976 5.508825 CCTCCGTCATCAAAATGGACAAAAA 60.509 40.000 0.00 0.00 33.42 1.94
3462 6977 5.527951 TCCGTCATCAAAATGGACAAAAAG 58.472 37.500 0.00 0.00 33.42 2.27
3463 6978 4.685628 CCGTCATCAAAATGGACAAAAAGG 59.314 41.667 0.00 0.00 33.42 3.11
3464 6979 4.685628 CGTCATCAAAATGGACAAAAAGGG 59.314 41.667 0.00 0.00 33.42 3.95
3465 6980 4.996758 GTCATCAAAATGGACAAAAAGGGG 59.003 41.667 0.00 0.00 33.42 4.79
3466 6981 4.657969 TCATCAAAATGGACAAAAAGGGGT 59.342 37.500 0.00 0.00 33.42 4.95
3467 6982 4.414337 TCAAAATGGACAAAAAGGGGTG 57.586 40.909 0.00 0.00 0.00 4.61
3468 6983 3.777522 TCAAAATGGACAAAAAGGGGTGT 59.222 39.130 0.00 0.00 0.00 4.16
3469 6984 4.962995 TCAAAATGGACAAAAAGGGGTGTA 59.037 37.500 0.00 0.00 0.00 2.90
3470 6985 5.604650 TCAAAATGGACAAAAAGGGGTGTAT 59.395 36.000 0.00 0.00 0.00 2.29
3471 6986 5.738619 AAATGGACAAAAAGGGGTGTATC 57.261 39.130 0.00 0.00 0.00 2.24
3472 6987 4.675063 ATGGACAAAAAGGGGTGTATCT 57.325 40.909 0.00 0.00 0.00 1.98
3473 6988 5.789574 ATGGACAAAAAGGGGTGTATCTA 57.210 39.130 0.00 0.00 0.00 1.98
3474 6989 5.586155 TGGACAAAAAGGGGTGTATCTAA 57.414 39.130 0.00 0.00 0.00 2.10
3475 6990 5.954757 TGGACAAAAAGGGGTGTATCTAAA 58.045 37.500 0.00 0.00 0.00 1.85
3476 6991 6.374588 TGGACAAAAAGGGGTGTATCTAAAA 58.625 36.000 0.00 0.00 0.00 1.52
3477 6992 6.265876 TGGACAAAAAGGGGTGTATCTAAAAC 59.734 38.462 0.00 0.00 0.00 2.43
3478 6993 6.492429 GGACAAAAAGGGGTGTATCTAAAACT 59.508 38.462 0.00 0.00 0.00 2.66
3479 6994 7.666804 GGACAAAAAGGGGTGTATCTAAAACTA 59.333 37.037 0.00 0.00 0.00 2.24
3480 6995 8.999905 ACAAAAAGGGGTGTATCTAAAACTAA 57.000 30.769 0.00 0.00 0.00 2.24
3481 6996 9.423964 ACAAAAAGGGGTGTATCTAAAACTAAA 57.576 29.630 0.00 0.00 0.00 1.85
3520 7035 9.657419 ACATCCCTTTTTATTCATTTTGATGAC 57.343 29.630 0.00 0.00 32.39 3.06
3521 7036 9.656040 CATCCCTTTTTATTCATTTTGATGACA 57.344 29.630 0.00 0.00 0.00 3.58
3523 7038 9.709495 TCCCTTTTTATTCATTTTGATGACAAG 57.291 29.630 0.00 0.00 37.32 3.16
3524 7039 9.492973 CCCTTTTTATTCATTTTGATGACAAGT 57.507 29.630 0.00 0.00 37.32 3.16
3531 7046 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
3532 7047 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
3533 7048 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
3534 7049 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3535 7050 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3536 7051 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3537 7052 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3538 7053 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3539 7054 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3540 7055 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3541 7056 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3542 7057 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3543 7058 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3544 7059 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3545 7060 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
3546 7061 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
3547 7062 1.379576 CCGGACGGAGGGAGTACTT 60.380 63.158 4.40 0.00 37.50 2.24
3548 7063 1.664321 CCGGACGGAGGGAGTACTTG 61.664 65.000 4.40 0.00 37.50 3.16
3549 7064 1.664321 CGGACGGAGGGAGTACTTGG 61.664 65.000 0.00 0.00 0.00 3.61
3550 7065 0.614134 GGACGGAGGGAGTACTTGGT 60.614 60.000 0.00 0.00 0.00 3.67
3551 7066 1.264295 GACGGAGGGAGTACTTGGTT 58.736 55.000 0.00 0.00 0.00 3.67
3552 7067 0.974383 ACGGAGGGAGTACTTGGTTG 59.026 55.000 0.00 0.00 0.00 3.77
3553 7068 0.249398 CGGAGGGAGTACTTGGTTGG 59.751 60.000 0.00 0.00 0.00 3.77
3554 7069 1.359168 GGAGGGAGTACTTGGTTGGT 58.641 55.000 0.00 0.00 0.00 3.67
3555 7070 1.703513 GGAGGGAGTACTTGGTTGGTT 59.296 52.381 0.00 0.00 0.00 3.67
3556 7071 2.107726 GGAGGGAGTACTTGGTTGGTTT 59.892 50.000 0.00 0.00 0.00 3.27
3557 7072 3.146847 GAGGGAGTACTTGGTTGGTTTG 58.853 50.000 0.00 0.00 0.00 2.93
3558 7073 2.512476 AGGGAGTACTTGGTTGGTTTGT 59.488 45.455 0.00 0.00 0.00 2.83
3559 7074 2.621526 GGGAGTACTTGGTTGGTTTGTG 59.378 50.000 0.00 0.00 0.00 3.33
3560 7075 2.034179 GGAGTACTTGGTTGGTTTGTGC 59.966 50.000 0.00 0.00 0.00 4.57
3561 7076 2.028876 AGTACTTGGTTGGTTTGTGCC 58.971 47.619 0.00 0.00 0.00 5.01
3562 7077 1.067974 GTACTTGGTTGGTTTGTGCCC 59.932 52.381 0.00 0.00 0.00 5.36
3563 7078 0.616111 ACTTGGTTGGTTTGTGCCCA 60.616 50.000 0.00 0.00 0.00 5.36
3564 7079 0.758123 CTTGGTTGGTTTGTGCCCAT 59.242 50.000 0.00 0.00 0.00 4.00
3565 7080 0.755686 TTGGTTGGTTTGTGCCCATC 59.244 50.000 0.00 0.00 0.00 3.51
3566 7081 0.105760 TGGTTGGTTTGTGCCCATCT 60.106 50.000 0.00 0.00 0.00 2.90
3567 7082 0.603065 GGTTGGTTTGTGCCCATCTC 59.397 55.000 0.00 0.00 0.00 2.75
3568 7083 1.620822 GTTGGTTTGTGCCCATCTCT 58.379 50.000 0.00 0.00 0.00 3.10
3569 7084 1.963515 GTTGGTTTGTGCCCATCTCTT 59.036 47.619 0.00 0.00 0.00 2.85
3570 7085 3.153919 GTTGGTTTGTGCCCATCTCTTA 58.846 45.455 0.00 0.00 0.00 2.10
3571 7086 3.737559 TGGTTTGTGCCCATCTCTTAT 57.262 42.857 0.00 0.00 0.00 1.73
3572 7087 4.853468 TGGTTTGTGCCCATCTCTTATA 57.147 40.909 0.00 0.00 0.00 0.98
3573 7088 5.186256 TGGTTTGTGCCCATCTCTTATAA 57.814 39.130 0.00 0.00 0.00 0.98
3574 7089 5.575157 TGGTTTGTGCCCATCTCTTATAAA 58.425 37.500 0.00 0.00 0.00 1.40
3575 7090 5.652014 TGGTTTGTGCCCATCTCTTATAAAG 59.348 40.000 0.00 0.00 0.00 1.85
3576 7091 5.652452 GGTTTGTGCCCATCTCTTATAAAGT 59.348 40.000 0.00 0.00 0.00 2.66
3577 7092 6.152831 GGTTTGTGCCCATCTCTTATAAAGTT 59.847 38.462 0.00 0.00 0.00 2.66
3578 7093 6.757897 TTGTGCCCATCTCTTATAAAGTTG 57.242 37.500 0.00 0.00 0.00 3.16
3579 7094 4.640201 TGTGCCCATCTCTTATAAAGTTGC 59.360 41.667 0.00 0.00 0.00 4.17
3580 7095 4.036852 GTGCCCATCTCTTATAAAGTTGCC 59.963 45.833 0.00 0.00 0.00 4.52
3581 7096 4.207165 GCCCATCTCTTATAAAGTTGCCA 58.793 43.478 0.00 0.00 0.00 4.92
3582 7097 4.644685 GCCCATCTCTTATAAAGTTGCCAA 59.355 41.667 0.00 0.00 0.00 4.52
3583 7098 5.302823 GCCCATCTCTTATAAAGTTGCCAAT 59.697 40.000 0.00 0.00 0.00 3.16
3584 7099 6.490040 GCCCATCTCTTATAAAGTTGCCAATA 59.510 38.462 0.00 0.00 0.00 1.90
3585 7100 7.308830 GCCCATCTCTTATAAAGTTGCCAATAG 60.309 40.741 0.00 0.00 0.00 1.73
3586 7101 7.721399 CCCATCTCTTATAAAGTTGCCAATAGT 59.279 37.037 0.00 0.00 0.00 2.12
3587 7102 9.125026 CCATCTCTTATAAAGTTGCCAATAGTT 57.875 33.333 0.00 0.00 0.00 2.24
3588 7103 9.941664 CATCTCTTATAAAGTTGCCAATAGTTG 57.058 33.333 0.00 0.00 0.00 3.16
3599 7114 3.855689 CCAATAGTTGGCAAGTCTTGG 57.144 47.619 27.55 27.55 45.17 3.61
3600 7115 3.157087 CCAATAGTTGGCAAGTCTTGGT 58.843 45.455 29.99 6.94 45.17 3.67
3601 7116 4.331968 CCAATAGTTGGCAAGTCTTGGTA 58.668 43.478 29.99 9.15 45.17 3.25
3602 7117 4.949856 CCAATAGTTGGCAAGTCTTGGTAT 59.050 41.667 29.99 10.78 45.17 2.73
3603 7118 5.418840 CCAATAGTTGGCAAGTCTTGGTATT 59.581 40.000 29.99 15.09 45.17 1.89
3604 7119 6.324819 CAATAGTTGGCAAGTCTTGGTATTG 58.675 40.000 19.84 14.94 0.00 1.90
3605 7120 2.558359 AGTTGGCAAGTCTTGGTATTGC 59.442 45.455 14.40 0.00 46.67 3.56
3638 7153 4.775295 GCAACATTTGGCAAGCCA 57.225 50.000 10.24 10.24 45.63 4.75
3655 7170 1.592064 CCAAAAATTGGCGGCAAACT 58.408 45.000 29.04 15.81 45.17 2.66
3656 7171 2.760374 CCAAAAATTGGCGGCAAACTA 58.240 42.857 29.04 5.92 45.17 2.24
3657 7172 3.134458 CCAAAAATTGGCGGCAAACTAA 58.866 40.909 29.04 5.47 45.17 2.24
3658 7173 3.750652 CCAAAAATTGGCGGCAAACTAAT 59.249 39.130 29.04 8.88 45.17 1.73
3659 7174 4.215185 CCAAAAATTGGCGGCAAACTAATT 59.785 37.500 29.04 14.87 45.17 1.40
3660 7175 5.409826 CCAAAAATTGGCGGCAAACTAATTA 59.590 36.000 29.04 2.86 45.17 1.40
3661 7176 6.093357 CCAAAAATTGGCGGCAAACTAATTAT 59.907 34.615 29.04 6.42 45.17 1.28
3662 7177 6.660887 AAAATTGGCGGCAAACTAATTATG 57.339 33.333 29.04 0.00 0.00 1.90
3663 7178 2.861462 TGGCGGCAAACTAATTATGC 57.139 45.000 10.22 1.60 39.33 3.14
3664 7179 2.374184 TGGCGGCAAACTAATTATGCT 58.626 42.857 10.22 0.00 39.94 3.79
3665 7180 2.357637 TGGCGGCAAACTAATTATGCTC 59.642 45.455 10.22 2.99 39.94 4.26
3666 7181 2.618709 GGCGGCAAACTAATTATGCTCT 59.381 45.455 3.07 0.00 39.94 4.09
3667 7182 3.813166 GGCGGCAAACTAATTATGCTCTA 59.187 43.478 3.07 0.00 39.94 2.43
3668 7183 4.274950 GGCGGCAAACTAATTATGCTCTAA 59.725 41.667 3.07 0.00 39.94 2.10
3669 7184 5.220970 GGCGGCAAACTAATTATGCTCTAAA 60.221 40.000 3.07 0.00 39.94 1.85
3670 7185 5.909610 GCGGCAAACTAATTATGCTCTAAAG 59.090 40.000 8.92 0.00 39.94 1.85
3681 7196 1.722011 GCTCTAAAGCGTTGGTAGCA 58.278 50.000 12.25 0.00 39.10 3.49
3682 7197 2.280628 GCTCTAAAGCGTTGGTAGCAT 58.719 47.619 12.25 0.00 39.10 3.79
3683 7198 2.030946 GCTCTAAAGCGTTGGTAGCATG 59.969 50.000 12.25 0.00 39.10 4.06
3684 7199 3.262420 CTCTAAAGCGTTGGTAGCATGT 58.738 45.455 0.00 0.00 37.01 3.21
3685 7200 3.259064 TCTAAAGCGTTGGTAGCATGTC 58.741 45.455 0.00 0.00 37.01 3.06
3686 7201 2.185004 AAAGCGTTGGTAGCATGTCT 57.815 45.000 0.00 0.00 37.01 3.41
3687 7202 1.726853 AAGCGTTGGTAGCATGTCTC 58.273 50.000 0.00 0.00 37.01 3.36
3688 7203 0.458543 AGCGTTGGTAGCATGTCTCG 60.459 55.000 0.00 0.00 37.01 4.04
3689 7204 0.457853 GCGTTGGTAGCATGTCTCGA 60.458 55.000 0.00 0.00 34.19 4.04
3690 7205 1.990799 CGTTGGTAGCATGTCTCGAA 58.009 50.000 0.00 0.00 0.00 3.71
3691 7206 1.654105 CGTTGGTAGCATGTCTCGAAC 59.346 52.381 0.00 0.00 0.00 3.95
3692 7207 2.000447 GTTGGTAGCATGTCTCGAACC 59.000 52.381 0.00 0.00 0.00 3.62
3693 7208 1.557099 TGGTAGCATGTCTCGAACCT 58.443 50.000 0.00 0.00 0.00 3.50
3694 7209 1.899814 TGGTAGCATGTCTCGAACCTT 59.100 47.619 0.00 0.00 0.00 3.50
3695 7210 3.093814 TGGTAGCATGTCTCGAACCTTA 58.906 45.455 0.00 0.00 0.00 2.69
3696 7211 3.130516 TGGTAGCATGTCTCGAACCTTAG 59.869 47.826 0.00 0.00 0.00 2.18
3697 7212 2.969628 AGCATGTCTCGAACCTTAGG 57.030 50.000 0.00 0.00 0.00 2.69
3698 7213 1.482593 AGCATGTCTCGAACCTTAGGG 59.517 52.381 2.32 0.00 38.88 3.53
3699 7214 1.480954 GCATGTCTCGAACCTTAGGGA 59.519 52.381 2.32 0.00 36.25 4.20
3700 7215 2.103263 GCATGTCTCGAACCTTAGGGAT 59.897 50.000 2.32 0.00 36.25 3.85
3701 7216 3.722147 CATGTCTCGAACCTTAGGGATG 58.278 50.000 2.32 0.00 36.25 3.51
3702 7217 2.816411 TGTCTCGAACCTTAGGGATGT 58.184 47.619 2.32 0.00 36.25 3.06
3703 7218 2.758979 TGTCTCGAACCTTAGGGATGTC 59.241 50.000 2.32 0.00 36.25 3.06
3704 7219 2.101082 GTCTCGAACCTTAGGGATGTCC 59.899 54.545 2.32 0.00 36.25 4.02
3706 7221 2.766828 CTCGAACCTTAGGGATGTCCTT 59.233 50.000 2.32 0.00 45.47 3.36
3707 7222 3.178865 TCGAACCTTAGGGATGTCCTTT 58.821 45.455 2.32 0.00 45.47 3.11
3708 7223 3.585732 TCGAACCTTAGGGATGTCCTTTT 59.414 43.478 2.32 0.00 45.47 2.27
3709 7224 4.042435 TCGAACCTTAGGGATGTCCTTTTT 59.958 41.667 2.32 0.00 45.47 1.94
3710 7225 5.248934 TCGAACCTTAGGGATGTCCTTTTTA 59.751 40.000 2.32 0.00 45.47 1.52
3711 7226 5.941647 CGAACCTTAGGGATGTCCTTTTTAA 59.058 40.000 2.32 0.00 45.47 1.52
3712 7227 6.602009 CGAACCTTAGGGATGTCCTTTTTAAT 59.398 38.462 2.32 0.00 45.47 1.40
3713 7228 7.771826 CGAACCTTAGGGATGTCCTTTTTAATA 59.228 37.037 2.32 0.00 45.47 0.98
3714 7229 9.470399 GAACCTTAGGGATGTCCTTTTTAATAA 57.530 33.333 2.32 0.00 45.47 1.40
3715 7230 9.831682 AACCTTAGGGATGTCCTTTTTAATAAA 57.168 29.630 2.32 0.00 45.47 1.40
3716 7231 9.831682 ACCTTAGGGATGTCCTTTTTAATAAAA 57.168 29.630 2.32 0.00 45.47 1.52
3738 7253 8.736751 AAAATAATACAACTTGGCGTACTTTG 57.263 30.769 0.00 0.00 0.00 2.77
3739 7254 7.443259 AATAATACAACTTGGCGTACTTTGT 57.557 32.000 0.00 0.00 34.79 2.83
3740 7255 4.742438 ATACAACTTGGCGTACTTTGTG 57.258 40.909 0.00 0.00 32.73 3.33
3741 7256 1.064952 ACAACTTGGCGTACTTTGTGC 59.935 47.619 0.00 0.00 0.00 4.57
3742 7257 0.306533 AACTTGGCGTACTTTGTGCG 59.693 50.000 3.98 3.98 43.88 5.34
3753 7268 5.663292 CGTACTTTGTGCGCTTATTATACC 58.337 41.667 9.73 0.00 34.73 2.73
3754 7269 5.461078 CGTACTTTGTGCGCTTATTATACCT 59.539 40.000 9.73 0.00 34.73 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 7.912949 TTTTATCGTATACGTGTACCATCAC 57.087 36.000 23.67 0.00 40.80 3.06
91 92 6.316640 TGGAACGTACAGATTGAAAACAAGAA 59.683 34.615 0.00 0.00 0.00 2.52
92 93 5.818336 TGGAACGTACAGATTGAAAACAAGA 59.182 36.000 0.00 0.00 0.00 3.02
93 94 6.055231 TGGAACGTACAGATTGAAAACAAG 57.945 37.500 0.00 0.00 0.00 3.16
94 95 6.038825 ACATGGAACGTACAGATTGAAAACAA 59.961 34.615 0.00 0.00 0.00 2.83
95 96 5.529430 ACATGGAACGTACAGATTGAAAACA 59.471 36.000 0.00 0.00 0.00 2.83
129 1062 2.508526 ACTTTCCTCCACAATGCTGAC 58.491 47.619 0.00 0.00 0.00 3.51
130 1063 2.957402 ACTTTCCTCCACAATGCTGA 57.043 45.000 0.00 0.00 0.00 4.26
141 1074 6.925610 TGATGTGCATACAATACTTTCCTC 57.074 37.500 0.00 0.00 40.84 3.71
152 1085 4.639755 ACCATCGAAAATGATGTGCATACA 59.360 37.500 0.00 0.00 43.39 2.29
182 3119 2.653726 TCTCCAGCTTGAGCACAAAAA 58.346 42.857 9.95 0.00 45.16 1.94
269 3210 3.291383 CTGCCCGGGCGTCAAAAA 61.291 61.111 39.00 20.00 45.51 1.94
300 3241 1.613630 CCCACCAGGCCAGTAGTCT 60.614 63.158 5.01 0.00 0.00 3.24
322 3263 1.589414 AAGGCCCAAGAGATGCTAGT 58.411 50.000 0.00 0.00 0.00 2.57
388 3532 2.914059 ACGCCATCCACAAAGTATACC 58.086 47.619 0.00 0.00 0.00 2.73
389 3533 4.957759 AAACGCCATCCACAAAGTATAC 57.042 40.909 0.00 0.00 0.00 1.47
390 3534 5.968528 AAAAACGCCATCCACAAAGTATA 57.031 34.783 0.00 0.00 0.00 1.47
391 3535 4.864704 AAAAACGCCATCCACAAAGTAT 57.135 36.364 0.00 0.00 0.00 2.12
600 3764 2.741092 CCCGCATACACCGCCTAT 59.259 61.111 0.00 0.00 0.00 2.57
752 3923 2.203938 GGTGGAGGTGGAGGTGGA 60.204 66.667 0.00 0.00 0.00 4.02
753 3924 3.706373 CGGTGGAGGTGGAGGTGG 61.706 72.222 0.00 0.00 0.00 4.61
754 3925 4.394712 GCGGTGGAGGTGGAGGTG 62.395 72.222 0.00 0.00 0.00 4.00
757 3928 3.775654 GAGGCGGTGGAGGTGGAG 61.776 72.222 0.00 0.00 0.00 3.86
758 3929 4.316823 AGAGGCGGTGGAGGTGGA 62.317 66.667 0.00 0.00 0.00 4.02
759 3930 4.087892 CAGAGGCGGTGGAGGTGG 62.088 72.222 0.00 0.00 0.00 4.61
760 3931 4.767255 GCAGAGGCGGTGGAGGTG 62.767 72.222 0.00 0.00 0.00 4.00
799 3976 3.977244 GTGGCGGTGCTTTGGTGG 61.977 66.667 0.00 0.00 0.00 4.61
800 3977 3.198236 CTGTGGCGGTGCTTTGGTG 62.198 63.158 0.00 0.00 0.00 4.17
801 3978 2.906897 CTGTGGCGGTGCTTTGGT 60.907 61.111 0.00 0.00 0.00 3.67
802 3979 3.673484 CCTGTGGCGGTGCTTTGG 61.673 66.667 0.00 0.00 0.00 3.28
803 3980 2.594303 TCCTGTGGCGGTGCTTTG 60.594 61.111 0.00 0.00 0.00 2.77
815 3992 1.985116 GAGACGGAAGGGCTCCTGT 60.985 63.158 0.00 0.00 42.85 4.00
816 3993 2.726351 GGAGACGGAAGGGCTCCTG 61.726 68.421 8.37 0.00 46.69 3.86
829 4006 2.760385 CGGTGGAGGGGAGGAGAC 60.760 72.222 0.00 0.00 0.00 3.36
830 4007 4.075793 CCGGTGGAGGGGAGGAGA 62.076 72.222 0.00 0.00 0.00 3.71
831 4008 3.396822 ATCCGGTGGAGGGGAGGAG 62.397 68.421 0.00 0.00 34.05 3.69
864 4041 1.995376 TGCCAAGGGAAGGAAAGAAC 58.005 50.000 0.00 0.00 0.00 3.01
879 4056 0.704076 AGGCTAGGGTTTGATTGCCA 59.296 50.000 0.00 0.00 42.46 4.92
948 4125 2.689034 GGTGACTGGGAGGGGGAG 60.689 72.222 0.00 0.00 0.00 4.30
949 4126 4.715130 CGGTGACTGGGAGGGGGA 62.715 72.222 0.00 0.00 0.00 4.81
959 4138 2.030562 CGGTTTGAGGCGGTGACT 59.969 61.111 0.00 0.00 0.00 3.41
1119 4315 2.119147 CTATGTCGTCCTCGGCCTCG 62.119 65.000 0.00 0.00 41.33 4.63
1358 4554 3.203412 CGTCGTCCTCCTCCTCCG 61.203 72.222 0.00 0.00 0.00 4.63
1399 4595 1.267574 TGCCGCTCCTTGATTCTCCT 61.268 55.000 0.00 0.00 0.00 3.69
1404 4600 2.821366 CGCTGCCGCTCCTTGATT 60.821 61.111 0.00 0.00 0.00 2.57
1473 4669 1.142748 CTCCTGCACGTCATCCTCC 59.857 63.158 0.00 0.00 0.00 4.30
1628 4824 2.100584 CTCTTCCTGATGTTCTCCTCCG 59.899 54.545 0.00 0.00 0.00 4.63
1637 4833 1.110442 CTCGAGCCTCTTCCTGATGT 58.890 55.000 0.00 0.00 0.00 3.06
1668 4864 0.325933 CCACAATCTGCCTGGTCTCA 59.674 55.000 0.00 0.00 0.00 3.27
1698 4894 2.943690 CTGAATGTGCTCATCCTTCCTG 59.056 50.000 1.01 0.00 32.56 3.86
1772 4968 3.089284 TCATACTCCTCAGCTTCGTTCA 58.911 45.455 0.00 0.00 0.00 3.18
1914 5110 0.974383 TCGGGTTCTTCTTCTCCCAC 59.026 55.000 0.00 0.00 39.87 4.61
2010 5206 1.269723 TGACTCACGTCATCACCACTC 59.730 52.381 0.00 0.00 44.85 3.51
2011 5207 1.328279 TGACTCACGTCATCACCACT 58.672 50.000 0.00 0.00 44.85 4.00
2046 5242 4.806330 AGAAATCACGGGTGTATATAGCG 58.194 43.478 0.00 0.00 0.00 4.26
2187 5383 0.177836 CATACGGTGCATCCCAGTCA 59.822 55.000 0.00 0.00 0.00 3.41
2246 5442 1.173913 ATTAAACAGGCCGGCTGAAC 58.826 50.000 28.56 9.72 0.00 3.18
2252 5448 3.199677 TGACGATAATTAAACAGGCCGG 58.800 45.455 0.00 0.00 0.00 6.13
2253 5449 6.721571 ATATGACGATAATTAAACAGGCCG 57.278 37.500 0.00 0.00 0.00 6.13
2273 5469 7.173907 GGCACATGTTCTACTGATAAGCAATAT 59.826 37.037 0.00 0.00 0.00 1.28
2315 5514 2.813754 GCAAGTAAGCATTGTCTGGACA 59.186 45.455 0.00 0.00 39.98 4.02
2326 5527 6.594159 GTGTCTTCTATTTAGGCAAGTAAGCA 59.406 38.462 0.00 0.00 35.83 3.91
2327 5528 6.594159 TGTGTCTTCTATTTAGGCAAGTAAGC 59.406 38.462 0.00 0.00 0.00 3.09
2328 5529 7.064728 GGTGTGTCTTCTATTTAGGCAAGTAAG 59.935 40.741 0.00 0.00 0.00 2.34
2329 5530 6.877322 GGTGTGTCTTCTATTTAGGCAAGTAA 59.123 38.462 0.00 0.00 0.00 2.24
2334 5535 3.259876 ACGGTGTGTCTTCTATTTAGGCA 59.740 43.478 0.00 0.00 0.00 4.75
2340 5541 4.081642 AGCATACACGGTGTGTCTTCTATT 60.082 41.667 23.36 0.00 43.92 1.73
2352 5553 1.806542 CAGCTGAAAAGCATACACGGT 59.193 47.619 8.42 0.00 37.25 4.83
2354 5555 3.811722 TTCAGCTGAAAAGCATACACG 57.188 42.857 26.61 0.00 37.25 4.49
2371 5572 5.087323 CCAGAGAGGGGCTATTAGTATTCA 58.913 45.833 0.00 0.00 0.00 2.57
2393 5594 1.728490 GGCATGCCGATTGAAGGACC 61.728 60.000 23.48 0.00 0.00 4.46
2396 5599 0.749091 TCAGGCATGCCGATTGAAGG 60.749 55.000 30.50 13.43 41.95 3.46
2401 5604 1.406539 GACAAATCAGGCATGCCGATT 59.593 47.619 32.65 32.65 41.95 3.34
2404 5607 1.434696 GGACAAATCAGGCATGCCG 59.565 57.895 30.50 23.94 41.95 5.69
2424 5627 6.481976 TCGACAAAGCTAGAATGACAAAAAGA 59.518 34.615 0.00 0.00 0.00 2.52
2427 5630 6.348458 CCATCGACAAAGCTAGAATGACAAAA 60.348 38.462 0.00 0.00 0.00 2.44
2433 5636 6.851222 AATACCATCGACAAAGCTAGAATG 57.149 37.500 0.00 0.00 0.00 2.67
2447 5653 7.549488 GGAGGGAGTAATTGATAAATACCATCG 59.451 40.741 0.00 0.00 0.00 3.84
2452 5658 6.872547 GGACGGAGGGAGTAATTGATAAATAC 59.127 42.308 0.00 0.00 0.00 1.89
2466 5672 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2467 5673 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
2468 5674 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
2469 5675 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
2470 5676 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
2471 5677 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
2472 5678 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
2473 5679 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
2474 5680 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
2475 5681 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
2476 5682 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
2477 5683 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
2480 5686 9.865321 ACTAGTGTCAAAAACGCTCTTATATTA 57.135 29.630 0.00 0.00 45.69 0.98
2481 5687 8.656849 CACTAGTGTCAAAAACGCTCTTATATT 58.343 33.333 15.06 0.00 45.69 1.28
2482 5688 7.817962 ACACTAGTGTCAAAAACGCTCTTATAT 59.182 33.333 22.95 0.00 45.69 0.86
2483 5689 7.149973 ACACTAGTGTCAAAAACGCTCTTATA 58.850 34.615 22.95 0.00 45.69 0.98
2484 5690 5.989777 ACACTAGTGTCAAAAACGCTCTTAT 59.010 36.000 22.95 0.00 45.69 1.73
2485 5691 5.353938 ACACTAGTGTCAAAAACGCTCTTA 58.646 37.500 22.95 0.00 45.69 2.10
2486 5692 4.189231 ACACTAGTGTCAAAAACGCTCTT 58.811 39.130 22.95 0.00 45.69 2.85
2487 5693 3.793559 ACACTAGTGTCAAAAACGCTCT 58.206 40.909 22.95 0.00 45.69 4.09
2488 5694 4.743644 ACTACACTAGTGTCAAAAACGCTC 59.256 41.667 31.11 0.00 45.69 5.03
2515 5721 7.990886 TCTGTCCCATAATATAAGAGCGTTTTT 59.009 33.333 0.00 0.00 0.00 1.94
2516 5722 7.506114 TCTGTCCCATAATATAAGAGCGTTTT 58.494 34.615 0.00 0.00 0.00 2.43
2517 5723 7.062749 TCTGTCCCATAATATAAGAGCGTTT 57.937 36.000 0.00 0.00 0.00 3.60
2518 5724 6.295349 CCTCTGTCCCATAATATAAGAGCGTT 60.295 42.308 0.00 0.00 0.00 4.84
2519 5725 5.186021 CCTCTGTCCCATAATATAAGAGCGT 59.814 44.000 0.00 0.00 0.00 5.07
2520 5726 5.394663 CCCTCTGTCCCATAATATAAGAGCG 60.395 48.000 0.00 0.00 0.00 5.03
2521 5727 5.721960 TCCCTCTGTCCCATAATATAAGAGC 59.278 44.000 0.00 0.00 0.00 4.09
2522 5728 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
2523 5729 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
2524 5730 7.896496 ACTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
2525 5731 7.776745 ACTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
2526 5732 7.358255 ACTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
2527 5733 6.234404 ACTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
2528 5734 5.681494 ACTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
2529 5735 4.561254 ACTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
2530 5736 4.348020 AACTACTCCCTCTGTCCCATAA 57.652 45.455 0.00 0.00 0.00 1.90
2531 5737 4.030913 CAAACTACTCCCTCTGTCCCATA 58.969 47.826 0.00 0.00 0.00 2.74
2532 5738 2.840651 CAAACTACTCCCTCTGTCCCAT 59.159 50.000 0.00 0.00 0.00 4.00
2533 5739 2.257207 CAAACTACTCCCTCTGTCCCA 58.743 52.381 0.00 0.00 0.00 4.37
2534 5740 2.258109 ACAAACTACTCCCTCTGTCCC 58.742 52.381 0.00 0.00 0.00 4.46
2535 5741 4.353383 AAACAAACTACTCCCTCTGTCC 57.647 45.455 0.00 0.00 0.00 4.02
2536 5742 5.008712 CCAAAAACAAACTACTCCCTCTGTC 59.991 44.000 0.00 0.00 0.00 3.51
2537 5743 4.887655 CCAAAAACAAACTACTCCCTCTGT 59.112 41.667 0.00 0.00 0.00 3.41
2538 5744 4.261614 GCCAAAAACAAACTACTCCCTCTG 60.262 45.833 0.00 0.00 0.00 3.35
2539 5745 3.889538 GCCAAAAACAAACTACTCCCTCT 59.110 43.478 0.00 0.00 0.00 3.69
2540 5746 3.889538 AGCCAAAAACAAACTACTCCCTC 59.110 43.478 0.00 0.00 0.00 4.30
2541 5747 3.910989 AGCCAAAAACAAACTACTCCCT 58.089 40.909 0.00 0.00 0.00 4.20
2542 5748 5.777850 TTAGCCAAAAACAAACTACTCCC 57.222 39.130 0.00 0.00 0.00 4.30
2543 5749 7.223971 CCTTTTTAGCCAAAAACAAACTACTCC 59.776 37.037 0.00 0.00 38.42 3.85
2544 5750 7.223971 CCCTTTTTAGCCAAAAACAAACTACTC 59.776 37.037 0.00 0.00 38.42 2.59
2545 5751 7.045416 CCCTTTTTAGCCAAAAACAAACTACT 58.955 34.615 0.00 0.00 38.42 2.57
2546 5752 6.238266 GCCCTTTTTAGCCAAAAACAAACTAC 60.238 38.462 0.00 0.00 38.42 2.73
2547 5753 5.818336 GCCCTTTTTAGCCAAAAACAAACTA 59.182 36.000 0.00 0.00 38.42 2.24
2548 5754 4.638421 GCCCTTTTTAGCCAAAAACAAACT 59.362 37.500 0.00 0.00 38.42 2.66
2580 5786 6.240894 GGCCATGATCCTTGTTATAAGATCA 58.759 40.000 14.18 14.18 46.59 2.92
2581 5787 5.649831 GGGCCATGATCCTTGTTATAAGATC 59.350 44.000 4.39 5.79 36.49 2.75
2742 5950 8.006741 ACAAAACAAACATTTAATCATCTCGC 57.993 30.769 0.00 0.00 0.00 5.03
2764 5972 0.183014 TACCGGGTCAAAGCCAACAA 59.817 50.000 6.32 0.00 34.89 2.83
2765 5973 0.535553 GTACCGGGTCAAAGCCAACA 60.536 55.000 6.32 0.00 34.89 3.33
2766 5974 1.239296 GGTACCGGGTCAAAGCCAAC 61.239 60.000 6.32 0.00 34.89 3.77
2767 5975 1.073548 GGTACCGGGTCAAAGCCAA 59.926 57.895 6.32 0.00 34.89 4.52
2768 5976 2.148052 TGGTACCGGGTCAAAGCCA 61.148 57.895 6.32 3.11 34.89 4.75
2769 5977 1.673337 GTGGTACCGGGTCAAAGCC 60.673 63.158 6.32 0.27 0.00 4.35
2770 5978 0.672711 GAGTGGTACCGGGTCAAAGC 60.673 60.000 6.32 0.00 0.00 3.51
2771 5979 0.974383 AGAGTGGTACCGGGTCAAAG 59.026 55.000 6.32 0.00 0.00 2.77
2773 5981 0.901580 GGAGAGTGGTACCGGGTCAA 60.902 60.000 6.32 0.00 0.00 3.18
2779 5987 2.092753 TGGTAGTAGGAGAGTGGTACCG 60.093 54.545 7.57 0.00 33.91 4.02
2785 5993 6.945435 AGTGATCATATGGTAGTAGGAGAGTG 59.055 42.308 0.00 0.00 0.00 3.51
2786 5994 7.097623 AGTGATCATATGGTAGTAGGAGAGT 57.902 40.000 0.00 0.00 0.00 3.24
2787 5995 7.282224 GCTAGTGATCATATGGTAGTAGGAGAG 59.718 44.444 0.00 0.00 0.00 3.20
2788 5996 7.037225 AGCTAGTGATCATATGGTAGTAGGAGA 60.037 40.741 0.00 0.00 0.00 3.71
2789 5997 7.066887 CAGCTAGTGATCATATGGTAGTAGGAG 59.933 44.444 0.00 0.00 0.00 3.69
2790 5998 6.887002 CAGCTAGTGATCATATGGTAGTAGGA 59.113 42.308 0.00 0.00 0.00 2.94
2791 5999 6.887002 TCAGCTAGTGATCATATGGTAGTAGG 59.113 42.308 0.00 0.00 0.00 3.18
2792 6000 7.929941 TCAGCTAGTGATCATATGGTAGTAG 57.070 40.000 0.00 7.39 0.00 2.57
2793 6001 8.706322 TTTCAGCTAGTGATCATATGGTAGTA 57.294 34.615 0.00 0.00 34.17 1.82
2794 6002 7.603180 TTTCAGCTAGTGATCATATGGTAGT 57.397 36.000 0.00 0.00 34.17 2.73
2795 6003 8.933807 CATTTTCAGCTAGTGATCATATGGTAG 58.066 37.037 0.00 0.00 34.17 3.18
2796 6004 7.879677 CCATTTTCAGCTAGTGATCATATGGTA 59.120 37.037 0.00 0.00 34.17 3.25
2797 6005 6.713903 CCATTTTCAGCTAGTGATCATATGGT 59.286 38.462 0.00 0.00 34.17 3.55
2798 6006 6.713903 ACCATTTTCAGCTAGTGATCATATGG 59.286 38.462 0.00 0.00 36.27 2.74
2799 6007 7.582352 CACCATTTTCAGCTAGTGATCATATG 58.418 38.462 0.00 0.00 34.17 1.78
2800 6008 6.206243 GCACCATTTTCAGCTAGTGATCATAT 59.794 38.462 0.00 0.00 34.17 1.78
2801 6009 5.528690 GCACCATTTTCAGCTAGTGATCATA 59.471 40.000 0.00 0.00 34.17 2.15
2802 6010 4.337555 GCACCATTTTCAGCTAGTGATCAT 59.662 41.667 0.00 0.00 34.17 2.45
2803 6011 3.691118 GCACCATTTTCAGCTAGTGATCA 59.309 43.478 0.00 0.00 34.17 2.92
2804 6012 3.944015 AGCACCATTTTCAGCTAGTGATC 59.056 43.478 0.00 0.00 35.19 2.92
2805 6013 3.960571 AGCACCATTTTCAGCTAGTGAT 58.039 40.909 0.00 0.00 35.19 3.06
2806 6014 3.423539 AGCACCATTTTCAGCTAGTGA 57.576 42.857 0.00 0.00 35.19 3.41
2807 6015 5.575957 CATAAGCACCATTTTCAGCTAGTG 58.424 41.667 0.00 0.00 36.07 2.74
2808 6016 4.096984 GCATAAGCACCATTTTCAGCTAGT 59.903 41.667 0.00 0.00 41.58 2.57
2809 6017 4.604976 GCATAAGCACCATTTTCAGCTAG 58.395 43.478 0.00 0.00 41.58 3.42
2810 6018 4.637483 GCATAAGCACCATTTTCAGCTA 57.363 40.909 0.00 0.00 41.58 3.32
2811 6019 3.515330 GCATAAGCACCATTTTCAGCT 57.485 42.857 0.00 0.00 41.58 4.24
2858 6066 9.433153 CTAAATGATAGCACATGTCTCATATGT 57.567 33.333 1.90 0.00 39.23 2.29
2866 6074 7.545362 ACAAGACTAAATGATAGCACATGTC 57.455 36.000 0.00 0.00 0.00 3.06
2926 6170 9.803315 GAGAAGTCACAGAAACATATATGTACA 57.197 33.333 18.56 0.00 40.80 2.90
2927 6171 8.959058 CGAGAAGTCACAGAAACATATATGTAC 58.041 37.037 18.56 14.87 40.80 2.90
2954 6198 2.706555 TATAGAAGATGCGCCTGTCG 57.293 50.000 4.18 0.00 42.12 4.35
2961 6205 9.882996 TTTCAAGCAAATATTATAGAAGATGCG 57.117 29.630 0.00 0.00 37.61 4.73
2974 6218 9.649024 CAAACGACAAAATTTTCAAGCAAATAT 57.351 25.926 0.00 0.00 0.00 1.28
2981 6233 7.219917 TGACTAGCAAACGACAAAATTTTCAAG 59.780 33.333 0.00 0.00 0.00 3.02
2983 6235 6.556212 TGACTAGCAAACGACAAAATTTTCA 58.444 32.000 0.00 0.00 0.00 2.69
2990 6242 3.138304 AGCATGACTAGCAAACGACAAA 58.862 40.909 0.00 0.00 0.00 2.83
2998 6250 5.003160 ACACAAATGTAGCATGACTAGCAA 58.997 37.500 0.00 0.00 37.26 3.91
2999 6251 4.392754 CACACAAATGTAGCATGACTAGCA 59.607 41.667 0.00 0.29 36.72 3.49
3000 6252 4.728882 GCACACAAATGTAGCATGACTAGC 60.729 45.833 0.00 0.00 36.72 3.42
3013 6265 4.458295 AGGATTCTCAAGAGCACACAAATG 59.542 41.667 0.00 0.00 0.00 2.32
3018 6270 6.155475 ACTATAGGATTCTCAAGAGCACAC 57.845 41.667 4.43 0.00 0.00 3.82
3019 6271 7.342026 TGTTACTATAGGATTCTCAAGAGCACA 59.658 37.037 4.43 0.00 0.00 4.57
3035 6287 8.831550 GGCTTTCTTGGAATTCTGTTACTATAG 58.168 37.037 5.23 0.00 0.00 1.31
3044 6296 7.874528 ACAAATTAAGGCTTTCTTGGAATTCTG 59.125 33.333 4.45 7.91 36.93 3.02
3071 6323 9.476202 GCCTATGTTTTCTTCAATTTAAACACT 57.524 29.630 0.00 0.00 41.59 3.55
3072 6324 8.708742 GGCCTATGTTTTCTTCAATTTAAACAC 58.291 33.333 0.00 0.00 41.59 3.32
3082 6589 5.221621 CCCTTTTTGGCCTATGTTTTCTTCA 60.222 40.000 3.32 0.00 0.00 3.02
3106 6613 4.644103 ATGAATAAAGCCACACATGAGC 57.356 40.909 0.00 0.00 0.00 4.26
3113 6620 4.398988 CCAACAGCTATGAATAAAGCCACA 59.601 41.667 0.40 0.00 39.64 4.17
3120 6630 9.276590 CTCATATTGTCCAACAGCTATGAATAA 57.723 33.333 11.95 0.00 35.78 1.40
3139 6649 7.154191 ACACAAATCCCAGGTATCTCATATT 57.846 36.000 0.00 0.00 0.00 1.28
3140 6650 6.770286 ACACAAATCCCAGGTATCTCATAT 57.230 37.500 0.00 0.00 0.00 1.78
3141 6651 6.575244 AACACAAATCCCAGGTATCTCATA 57.425 37.500 0.00 0.00 0.00 2.15
3151 6661 5.995282 TGTTAGTCTGTAACACAAATCCCAG 59.005 40.000 0.00 0.00 33.05 4.45
3152 6662 5.931294 TGTTAGTCTGTAACACAAATCCCA 58.069 37.500 0.00 0.00 33.05 4.37
3155 6665 8.534333 TGATCTGTTAGTCTGTAACACAAATC 57.466 34.615 0.00 0.49 34.21 2.17
3185 6695 5.526846 CAGTGAATTCTGGAGAAATAGCCTC 59.473 44.000 7.05 0.00 37.61 4.70
3219 6729 5.231991 CACAACAACTAAATGAACAGGCAAC 59.768 40.000 0.00 0.00 0.00 4.17
3228 6743 7.831753 TGGAAAAGAACACAACAACTAAATGA 58.168 30.769 0.00 0.00 0.00 2.57
3234 6749 5.394115 GGTGATGGAAAAGAACACAACAACT 60.394 40.000 0.00 0.00 33.82 3.16
3334 6849 0.121197 TCAGGAGGGGAGGATTTGGT 59.879 55.000 0.00 0.00 0.00 3.67
3348 6863 1.967535 CCAGCAGTCGAGTTCAGGA 59.032 57.895 0.00 0.00 0.00 3.86
3349 6864 1.739562 GCCAGCAGTCGAGTTCAGG 60.740 63.158 0.00 0.00 0.00 3.86
3350 6865 1.739562 GGCCAGCAGTCGAGTTCAG 60.740 63.158 0.00 0.00 0.00 3.02
3351 6866 2.343758 GGCCAGCAGTCGAGTTCA 59.656 61.111 0.00 0.00 0.00 3.18
3352 6867 2.435059 GGGCCAGCAGTCGAGTTC 60.435 66.667 4.39 0.00 0.00 3.01
3353 6868 4.379243 CGGGCCAGCAGTCGAGTT 62.379 66.667 4.39 0.00 0.00 3.01
3368 6883 3.611674 GGCAACAAACCCCACCGG 61.612 66.667 0.00 0.00 37.81 5.28
3417 6932 5.513267 GGAGGGAGTAGTAGGCAATATTTGG 60.513 48.000 0.00 0.00 0.00 3.28
3418 6933 5.552178 GGAGGGAGTAGTAGGCAATATTTG 58.448 45.833 0.00 0.00 0.00 2.32
3419 6934 4.283722 CGGAGGGAGTAGTAGGCAATATTT 59.716 45.833 0.00 0.00 0.00 1.40
3420 6935 3.833070 CGGAGGGAGTAGTAGGCAATATT 59.167 47.826 0.00 0.00 0.00 1.28
3421 6936 3.181420 ACGGAGGGAGTAGTAGGCAATAT 60.181 47.826 0.00 0.00 0.00 1.28
3422 6937 2.176364 ACGGAGGGAGTAGTAGGCAATA 59.824 50.000 0.00 0.00 0.00 1.90
3423 6938 1.063114 ACGGAGGGAGTAGTAGGCAAT 60.063 52.381 0.00 0.00 0.00 3.56
3424 6939 0.333993 ACGGAGGGAGTAGTAGGCAA 59.666 55.000 0.00 0.00 0.00 4.52
3425 6940 0.106819 GACGGAGGGAGTAGTAGGCA 60.107 60.000 0.00 0.00 0.00 4.75
3426 6941 0.106819 TGACGGAGGGAGTAGTAGGC 60.107 60.000 0.00 0.00 0.00 3.93
3427 6942 2.158652 TGATGACGGAGGGAGTAGTAGG 60.159 54.545 0.00 0.00 0.00 3.18
3428 6943 3.210232 TGATGACGGAGGGAGTAGTAG 57.790 52.381 0.00 0.00 0.00 2.57
3429 6944 3.657398 TTGATGACGGAGGGAGTAGTA 57.343 47.619 0.00 0.00 0.00 1.82
3430 6945 2.526888 TTGATGACGGAGGGAGTAGT 57.473 50.000 0.00 0.00 0.00 2.73
3431 6946 3.887621 TTTTGATGACGGAGGGAGTAG 57.112 47.619 0.00 0.00 0.00 2.57
3432 6947 3.118408 CCATTTTGATGACGGAGGGAGTA 60.118 47.826 0.00 0.00 0.00 2.59
3433 6948 2.356125 CCATTTTGATGACGGAGGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
3434 6949 2.092968 TCCATTTTGATGACGGAGGGAG 60.093 50.000 0.00 0.00 0.00 4.30
3435 6950 1.912731 TCCATTTTGATGACGGAGGGA 59.087 47.619 0.00 0.00 0.00 4.20
3436 6951 2.017049 GTCCATTTTGATGACGGAGGG 58.983 52.381 0.00 0.00 0.00 4.30
3437 6952 2.710377 TGTCCATTTTGATGACGGAGG 58.290 47.619 0.00 0.00 0.00 4.30
3438 6953 4.764679 TTTGTCCATTTTGATGACGGAG 57.235 40.909 0.00 0.00 0.00 4.63
3439 6954 5.508825 CCTTTTTGTCCATTTTGATGACGGA 60.509 40.000 0.00 0.00 0.00 4.69
3440 6955 4.685628 CCTTTTTGTCCATTTTGATGACGG 59.314 41.667 0.00 0.00 0.00 4.79
3441 6956 4.685628 CCCTTTTTGTCCATTTTGATGACG 59.314 41.667 0.00 0.00 0.00 4.35
3442 6957 4.996758 CCCCTTTTTGTCCATTTTGATGAC 59.003 41.667 0.00 0.00 0.00 3.06
3443 6958 4.657969 ACCCCTTTTTGTCCATTTTGATGA 59.342 37.500 0.00 0.00 0.00 2.92
3444 6959 4.756135 CACCCCTTTTTGTCCATTTTGATG 59.244 41.667 0.00 0.00 0.00 3.07
3445 6960 4.411869 ACACCCCTTTTTGTCCATTTTGAT 59.588 37.500 0.00 0.00 0.00 2.57
3446 6961 3.777522 ACACCCCTTTTTGTCCATTTTGA 59.222 39.130 0.00 0.00 0.00 2.69
3447 6962 4.149511 ACACCCCTTTTTGTCCATTTTG 57.850 40.909 0.00 0.00 0.00 2.44
3448 6963 5.843969 AGATACACCCCTTTTTGTCCATTTT 59.156 36.000 0.00 0.00 0.00 1.82
3449 6964 5.402630 AGATACACCCCTTTTTGTCCATTT 58.597 37.500 0.00 0.00 0.00 2.32
3450 6965 5.010708 AGATACACCCCTTTTTGTCCATT 57.989 39.130 0.00 0.00 0.00 3.16
3451 6966 4.675063 AGATACACCCCTTTTTGTCCAT 57.325 40.909 0.00 0.00 0.00 3.41
3452 6967 5.586155 TTAGATACACCCCTTTTTGTCCA 57.414 39.130 0.00 0.00 0.00 4.02
3453 6968 6.492429 AGTTTTAGATACACCCCTTTTTGTCC 59.508 38.462 0.00 0.00 0.00 4.02
3454 6969 7.520451 AGTTTTAGATACACCCCTTTTTGTC 57.480 36.000 0.00 0.00 0.00 3.18
3455 6970 8.999905 TTAGTTTTAGATACACCCCTTTTTGT 57.000 30.769 0.00 0.00 0.00 2.83
3494 7009 9.657419 GTCATCAAAATGAATAAAAAGGGATGT 57.343 29.630 0.00 0.00 43.42 3.06
3495 7010 9.656040 TGTCATCAAAATGAATAAAAAGGGATG 57.344 29.630 0.00 0.00 43.42 3.51
3497 7012 9.709495 CTTGTCATCAAAATGAATAAAAAGGGA 57.291 29.630 0.00 0.00 43.42 4.20
3498 7013 9.492973 ACTTGTCATCAAAATGAATAAAAAGGG 57.507 29.630 0.00 0.00 43.42 3.95
3506 7021 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
3507 7022 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
3508 7023 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
3509 7024 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
3510 7025 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
3511 7026 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
3512 7027 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3513 7028 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3514 7029 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3515 7030 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3516 7031 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3517 7032 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3518 7033 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3519 7034 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3520 7035 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3521 7036 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3522 7037 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3523 7038 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3524 7039 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3525 7040 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3526 7041 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
3527 7042 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
3528 7043 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
3529 7044 1.379576 AAGTACTCCCTCCGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
3530 7045 1.664321 CCAAGTACTCCCTCCGTCCG 61.664 65.000 0.00 0.00 0.00 4.79
3531 7046 0.614134 ACCAAGTACTCCCTCCGTCC 60.614 60.000 0.00 0.00 0.00 4.79
3532 7047 1.067071 CAACCAAGTACTCCCTCCGTC 60.067 57.143 0.00 0.00 0.00 4.79
3533 7048 0.974383 CAACCAAGTACTCCCTCCGT 59.026 55.000 0.00 0.00 0.00 4.69
3534 7049 0.249398 CCAACCAAGTACTCCCTCCG 59.751 60.000 0.00 0.00 0.00 4.63
3535 7050 1.359168 ACCAACCAAGTACTCCCTCC 58.641 55.000 0.00 0.00 0.00 4.30
3536 7051 3.146847 CAAACCAACCAAGTACTCCCTC 58.853 50.000 0.00 0.00 0.00 4.30
3537 7052 2.512476 ACAAACCAACCAAGTACTCCCT 59.488 45.455 0.00 0.00 0.00 4.20
3538 7053 2.621526 CACAAACCAACCAAGTACTCCC 59.378 50.000 0.00 0.00 0.00 4.30
3539 7054 2.034179 GCACAAACCAACCAAGTACTCC 59.966 50.000 0.00 0.00 0.00 3.85
3540 7055 2.034179 GGCACAAACCAACCAAGTACTC 59.966 50.000 0.00 0.00 0.00 2.59
3541 7056 2.028876 GGCACAAACCAACCAAGTACT 58.971 47.619 0.00 0.00 0.00 2.73
3542 7057 1.067974 GGGCACAAACCAACCAAGTAC 59.932 52.381 0.00 0.00 0.00 2.73
3543 7058 1.342076 TGGGCACAAACCAACCAAGTA 60.342 47.619 0.00 0.00 34.44 2.24
3544 7059 0.616111 TGGGCACAAACCAACCAAGT 60.616 50.000 0.00 0.00 34.44 3.16
3545 7060 0.758123 ATGGGCACAAACCAACCAAG 59.242 50.000 0.00 0.00 42.17 3.61
3546 7061 0.755686 GATGGGCACAAACCAACCAA 59.244 50.000 0.00 0.00 42.17 3.67
3547 7062 0.105760 AGATGGGCACAAACCAACCA 60.106 50.000 0.00 0.00 42.17 3.67
3548 7063 0.603065 GAGATGGGCACAAACCAACC 59.397 55.000 0.00 0.00 42.17 3.77
3549 7064 1.620822 AGAGATGGGCACAAACCAAC 58.379 50.000 0.00 0.00 42.17 3.77
3550 7065 2.380064 AAGAGATGGGCACAAACCAA 57.620 45.000 0.00 0.00 42.17 3.67
3551 7066 3.737559 ATAAGAGATGGGCACAAACCA 57.262 42.857 0.00 0.00 43.22 3.67
3552 7067 5.652452 ACTTTATAAGAGATGGGCACAAACC 59.348 40.000 0.00 0.00 0.00 3.27
3553 7068 6.759497 ACTTTATAAGAGATGGGCACAAAC 57.241 37.500 0.00 0.00 0.00 2.93
3554 7069 6.350110 GCAACTTTATAAGAGATGGGCACAAA 60.350 38.462 0.00 0.00 0.00 2.83
3555 7070 5.125417 GCAACTTTATAAGAGATGGGCACAA 59.875 40.000 0.00 0.00 0.00 3.33
3556 7071 4.640201 GCAACTTTATAAGAGATGGGCACA 59.360 41.667 0.00 0.00 0.00 4.57
3557 7072 4.036852 GGCAACTTTATAAGAGATGGGCAC 59.963 45.833 0.00 0.00 0.00 5.01
3558 7073 4.207165 GGCAACTTTATAAGAGATGGGCA 58.793 43.478 0.00 0.00 0.00 5.36
3559 7074 4.207165 TGGCAACTTTATAAGAGATGGGC 58.793 43.478 0.00 0.00 37.61 5.36
3560 7075 6.966534 ATTGGCAACTTTATAAGAGATGGG 57.033 37.500 0.00 0.00 37.61 4.00
3561 7076 8.682936 ACTATTGGCAACTTTATAAGAGATGG 57.317 34.615 0.00 0.00 37.61 3.51
3562 7077 9.941664 CAACTATTGGCAACTTTATAAGAGATG 57.058 33.333 0.00 0.00 37.61 2.90
3563 7078 9.125026 CCAACTATTGGCAACTTTATAAGAGAT 57.875 33.333 0.00 0.00 45.17 2.75
3564 7079 8.506168 CCAACTATTGGCAACTTTATAAGAGA 57.494 34.615 0.00 0.00 45.17 3.10
3580 7095 6.324819 CAATACCAAGACTTGCCAACTATTG 58.675 40.000 9.85 10.14 0.00 1.90
3581 7096 5.105756 GCAATACCAAGACTTGCCAACTATT 60.106 40.000 9.85 3.04 39.42 1.73
3582 7097 4.399303 GCAATACCAAGACTTGCCAACTAT 59.601 41.667 9.85 0.00 39.42 2.12
3583 7098 3.756434 GCAATACCAAGACTTGCCAACTA 59.244 43.478 9.85 0.00 39.42 2.24
3584 7099 2.558359 GCAATACCAAGACTTGCCAACT 59.442 45.455 9.85 0.00 39.42 3.16
3585 7100 2.946564 GCAATACCAAGACTTGCCAAC 58.053 47.619 9.85 0.00 39.42 3.77
3605 7120 4.641094 AATGTTGCCATTGCCAAATATTGG 59.359 37.500 4.74 4.74 42.55 3.16
3606 7121 5.821516 AATGTTGCCATTGCCAAATATTG 57.178 34.783 0.00 0.00 39.81 1.90
3607 7122 5.125739 CCAAATGTTGCCATTGCCAAATATT 59.874 36.000 0.00 0.00 40.42 1.28
3608 7123 4.641094 CCAAATGTTGCCATTGCCAAATAT 59.359 37.500 0.00 0.00 40.42 1.28
3609 7124 4.008330 CCAAATGTTGCCATTGCCAAATA 58.992 39.130 0.00 0.00 40.42 1.40
3610 7125 2.820787 CCAAATGTTGCCATTGCCAAAT 59.179 40.909 0.00 0.00 40.42 2.32
3611 7126 2.228059 CCAAATGTTGCCATTGCCAAA 58.772 42.857 0.00 0.00 40.42 3.28
3612 7127 1.893544 CCAAATGTTGCCATTGCCAA 58.106 45.000 0.00 0.00 40.42 4.52
3613 7128 0.605860 GCCAAATGTTGCCATTGCCA 60.606 50.000 0.00 0.00 40.42 4.92
3614 7129 0.605860 TGCCAAATGTTGCCATTGCC 60.606 50.000 0.00 0.00 40.42 4.52
3615 7130 1.198178 CTTGCCAAATGTTGCCATTGC 59.802 47.619 0.00 0.00 40.42 3.56
3616 7131 1.198178 GCTTGCCAAATGTTGCCATTG 59.802 47.619 0.00 0.00 40.42 2.82
3617 7132 1.525941 GCTTGCCAAATGTTGCCATT 58.474 45.000 0.00 0.00 43.14 3.16
3618 7133 0.321830 GGCTTGCCAAATGTTGCCAT 60.322 50.000 6.79 0.00 40.04 4.40
3619 7134 1.071128 GGCTTGCCAAATGTTGCCA 59.929 52.632 6.79 0.00 40.04 4.92
3620 7135 0.534652 TTGGCTTGCCAAATGTTGCC 60.535 50.000 22.94 0.00 40.62 4.52
3621 7136 1.307097 TTTGGCTTGCCAAATGTTGC 58.693 45.000 29.24 0.00 35.16 4.17
3622 7137 4.571372 ATTTTTGGCTTGCCAAATGTTG 57.429 36.364 31.98 0.00 39.08 3.33
3623 7138 4.202131 CCAATTTTTGGCTTGCCAAATGTT 60.202 37.500 31.98 25.92 45.17 2.71
3624 7139 3.318557 CCAATTTTTGGCTTGCCAAATGT 59.681 39.130 31.98 22.78 45.17 2.71
3625 7140 3.903360 CCAATTTTTGGCTTGCCAAATG 58.097 40.909 31.98 26.73 45.17 2.32
3637 7152 5.355467 AATTAGTTTGCCGCCAATTTTTG 57.645 34.783 0.00 0.00 0.00 2.44
3638 7153 6.403092 GCATAATTAGTTTGCCGCCAATTTTT 60.403 34.615 0.00 0.00 0.00 1.94
3639 7154 5.064579 GCATAATTAGTTTGCCGCCAATTTT 59.935 36.000 0.00 0.00 0.00 1.82
3640 7155 4.570369 GCATAATTAGTTTGCCGCCAATTT 59.430 37.500 0.00 0.00 0.00 1.82
3641 7156 4.119136 GCATAATTAGTTTGCCGCCAATT 58.881 39.130 0.00 0.00 0.00 2.32
3642 7157 3.384467 AGCATAATTAGTTTGCCGCCAAT 59.616 39.130 6.02 0.00 37.07 3.16
3643 7158 2.757868 AGCATAATTAGTTTGCCGCCAA 59.242 40.909 6.02 0.00 37.07 4.52
3644 7159 2.357637 GAGCATAATTAGTTTGCCGCCA 59.642 45.455 6.02 0.00 37.07 5.69
3645 7160 2.618709 AGAGCATAATTAGTTTGCCGCC 59.381 45.455 6.02 0.00 37.07 6.13
3646 7161 3.971032 AGAGCATAATTAGTTTGCCGC 57.029 42.857 6.02 0.54 37.07 6.53
3662 7177 1.722011 TGCTACCAACGCTTTAGAGC 58.278 50.000 0.00 0.00 45.65 4.09
3663 7178 3.262420 ACATGCTACCAACGCTTTAGAG 58.738 45.455 0.00 0.00 0.00 2.43
3664 7179 3.056107 AGACATGCTACCAACGCTTTAGA 60.056 43.478 0.00 0.00 0.00 2.10
3665 7180 3.262420 AGACATGCTACCAACGCTTTAG 58.738 45.455 0.00 0.00 0.00 1.85
3666 7181 3.259064 GAGACATGCTACCAACGCTTTA 58.741 45.455 0.00 0.00 0.00 1.85
3667 7182 2.076863 GAGACATGCTACCAACGCTTT 58.923 47.619 0.00 0.00 0.00 3.51
3668 7183 1.726853 GAGACATGCTACCAACGCTT 58.273 50.000 0.00 0.00 0.00 4.68
3669 7184 0.458543 CGAGACATGCTACCAACGCT 60.459 55.000 0.00 0.00 0.00 5.07
3670 7185 0.457853 TCGAGACATGCTACCAACGC 60.458 55.000 0.00 0.00 0.00 4.84
3671 7186 1.654105 GTTCGAGACATGCTACCAACG 59.346 52.381 0.00 0.00 0.00 4.10
3672 7187 2.000447 GGTTCGAGACATGCTACCAAC 59.000 52.381 0.00 0.00 0.00 3.77
3673 7188 1.899814 AGGTTCGAGACATGCTACCAA 59.100 47.619 0.00 0.00 0.00 3.67
3674 7189 1.557099 AGGTTCGAGACATGCTACCA 58.443 50.000 0.00 0.00 0.00 3.25
3675 7190 2.674796 AAGGTTCGAGACATGCTACC 57.325 50.000 0.00 0.00 0.00 3.18
3676 7191 3.491104 CCCTAAGGTTCGAGACATGCTAC 60.491 52.174 0.00 0.00 0.00 3.58
3677 7192 2.693591 CCCTAAGGTTCGAGACATGCTA 59.306 50.000 0.00 0.00 0.00 3.49
3678 7193 1.482593 CCCTAAGGTTCGAGACATGCT 59.517 52.381 0.00 0.00 0.00 3.79
3679 7194 1.480954 TCCCTAAGGTTCGAGACATGC 59.519 52.381 0.00 0.00 0.00 4.06
3680 7195 3.133003 ACATCCCTAAGGTTCGAGACATG 59.867 47.826 0.00 0.00 0.00 3.21
3681 7196 3.375699 ACATCCCTAAGGTTCGAGACAT 58.624 45.455 0.00 0.00 0.00 3.06
3682 7197 2.758979 GACATCCCTAAGGTTCGAGACA 59.241 50.000 0.00 0.00 0.00 3.41
3683 7198 2.101082 GGACATCCCTAAGGTTCGAGAC 59.899 54.545 0.00 0.00 0.00 3.36
3684 7199 2.024273 AGGACATCCCTAAGGTTCGAGA 60.024 50.000 0.00 0.00 45.48 4.04
3685 7200 2.389715 AGGACATCCCTAAGGTTCGAG 58.610 52.381 0.00 0.00 45.48 4.04
3686 7201 2.544844 AGGACATCCCTAAGGTTCGA 57.455 50.000 0.00 0.00 45.48 3.71
3712 7227 9.828852 CAAAGTACGCCAAGTTGTATTATTTTA 57.171 29.630 1.45 0.00 0.00 1.52
3713 7228 8.354426 ACAAAGTACGCCAAGTTGTATTATTTT 58.646 29.630 1.45 0.00 30.88 1.82
3714 7229 7.806014 CACAAAGTACGCCAAGTTGTATTATTT 59.194 33.333 1.45 0.00 31.44 1.40
3715 7230 7.302524 CACAAAGTACGCCAAGTTGTATTATT 58.697 34.615 1.45 0.00 31.44 1.40
3716 7231 6.622028 GCACAAAGTACGCCAAGTTGTATTAT 60.622 38.462 1.45 0.00 31.44 1.28
3717 7232 5.334260 GCACAAAGTACGCCAAGTTGTATTA 60.334 40.000 1.45 0.00 31.44 0.98
3718 7233 4.555906 GCACAAAGTACGCCAAGTTGTATT 60.556 41.667 1.45 0.00 31.44 1.89
3719 7234 3.058501 GCACAAAGTACGCCAAGTTGTAT 60.059 43.478 1.45 0.00 31.44 2.29
3720 7235 2.288458 GCACAAAGTACGCCAAGTTGTA 59.712 45.455 1.45 0.00 31.44 2.41
3721 7236 1.064952 GCACAAAGTACGCCAAGTTGT 59.935 47.619 1.45 0.00 32.78 3.32
3722 7237 1.753956 GCACAAAGTACGCCAAGTTG 58.246 50.000 0.00 0.00 0.00 3.16
3723 7238 0.306533 CGCACAAAGTACGCCAAGTT 59.693 50.000 0.00 0.00 0.00 2.66
3724 7239 1.938861 CGCACAAAGTACGCCAAGT 59.061 52.632 0.00 0.00 0.00 3.16
3725 7240 1.440353 GCGCACAAAGTACGCCAAG 60.440 57.895 0.30 0.00 41.74 3.61
3726 7241 2.634777 GCGCACAAAGTACGCCAA 59.365 55.556 0.30 0.00 41.74 4.52
3730 7245 5.461078 AGGTATAATAAGCGCACAAAGTACG 59.539 40.000 11.47 0.00 0.00 3.67
3731 7246 6.839820 AGGTATAATAAGCGCACAAAGTAC 57.160 37.500 11.47 5.81 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.