Multiple sequence alignment - TraesCS3B01G474200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G474200 chr3B 100.000 4180 0 0 1 4180 723447101 723442922 0.000000e+00 7720.0
1 TraesCS3B01G474200 chr3B 81.905 525 83 9 2662 3180 723150804 723150286 2.310000e-117 433.0
2 TraesCS3B01G474200 chr3B 80.952 399 76 0 1702 2100 723507517 723507119 2.430000e-82 316.0
3 TraesCS3B01G474200 chr3B 91.282 195 14 3 192 385 445641480 445641672 3.200000e-66 263.0
4 TraesCS3B01G474200 chr3B 89.216 204 12 7 1 194 625420388 625420591 3.230000e-61 246.0
5 TraesCS3B01G474200 chr3B 88.235 204 14 4 1 194 59683691 59683894 6.990000e-58 235.0
6 TraesCS3B01G474200 chr3B 87.745 204 15 8 1 194 825577459 825577662 3.250000e-56 230.0
7 TraesCS3B01G474200 chr3B 86.538 156 18 1 377 529 59683890 59684045 7.190000e-38 169.0
8 TraesCS3B01G474200 chr3B 86.207 87 9 3 4095 4180 723273069 723272985 1.600000e-14 91.6
9 TraesCS3B01G474200 chr3B 83.721 86 13 1 4095 4180 723266523 723266439 3.460000e-11 80.5
10 TraesCS3B01G474200 chr3D 90.488 3522 178 56 633 4071 546333707 546330260 0.000000e+00 4503.0
11 TraesCS3B01G474200 chr3D 81.107 524 89 7 2662 3180 546255718 546255200 1.080000e-110 411.0
12 TraesCS3B01G474200 chr3D 79.699 399 81 0 1702 2100 546477256 546476858 5.290000e-74 289.0
13 TraesCS3B01G474200 chr3D 93.717 191 9 3 191 381 605030982 605031169 2.460000e-72 283.0
14 TraesCS3B01G474200 chr3D 78.643 398 81 4 1705 2100 546256563 546256168 1.150000e-65 261.0
15 TraesCS3B01G474200 chr3D 85.556 90 12 1 4091 4180 546316997 546316909 4.450000e-15 93.5
16 TraesCS3B01G474200 chr3D 92.188 64 4 1 4117 4180 546330246 546330184 5.760000e-14 89.8
17 TraesCS3B01G474200 chr3D 97.727 44 1 0 4137 4180 546294017 546293974 4.480000e-10 76.8
18 TraesCS3B01G474200 chr3A 88.905 2028 151 37 2173 4180 683188190 683186217 0.000000e+00 2431.0
19 TraesCS3B01G474200 chr3A 92.810 765 36 8 1393 2149 683189073 683188320 0.000000e+00 1090.0
20 TraesCS3B01G474200 chr3A 85.363 813 41 32 633 1396 683189883 683189100 0.000000e+00 771.0
21 TraesCS3B01G474200 chr3A 81.698 530 87 7 2656 3180 682989408 682988884 2.310000e-117 433.0
22 TraesCS3B01G474200 chr3A 80.702 399 77 0 1702 2100 683253409 683253011 1.130000e-80 311.0
23 TraesCS3B01G474200 chr3A 78.392 398 82 4 1705 2100 682990244 682989849 5.360000e-64 255.0
24 TraesCS3B01G474200 chr3A 77.326 172 29 8 4011 4180 683065521 683065358 4.450000e-15 93.5
25 TraesCS3B01G474200 chr4B 93.194 191 11 2 191 381 621703408 621703596 3.180000e-71 279.0
26 TraesCS3B01G474200 chr1D 93.158 190 11 2 192 381 19051498 19051685 1.140000e-70 278.0
27 TraesCS3B01G474200 chr1D 89.706 204 11 5 1 194 296632472 296632675 6.940000e-63 252.0
28 TraesCS3B01G474200 chr1D 95.455 44 1 1 4138 4180 432706648 432706691 7.500000e-08 69.4
29 TraesCS3B01G474200 chr7D 92.308 195 13 2 188 382 509584378 509584570 4.120000e-70 276.0
30 TraesCS3B01G474200 chr7D 88.780 205 13 4 1 195 7528296 7528500 4.180000e-60 243.0
31 TraesCS3B01G474200 chr7D 84.118 170 20 5 1600 1766 279737010 279736845 1.560000e-34 158.0
32 TraesCS3B01G474200 chr1B 91.710 193 14 2 189 381 529051195 529051005 2.480000e-67 267.0
33 TraesCS3B01G474200 chr1B 92.473 186 12 2 194 379 64290511 64290694 8.910000e-67 265.0
34 TraesCS3B01G474200 chr1B 89.604 202 17 4 191 391 357215520 357215322 1.930000e-63 254.0
35 TraesCS3B01G474200 chr1B 87.745 204 15 6 1 194 12731868 12732071 3.250000e-56 230.0
36 TraesCS3B01G474200 chr5B 92.063 189 12 3 194 382 487329532 487329347 3.200000e-66 263.0
37 TraesCS3B01G474200 chr7A 87.879 198 14 5 1 188 634327833 634328030 1.510000e-54 224.0
38 TraesCS3B01G474200 chr7A 86.634 202 20 5 1 195 50263580 50263379 2.530000e-52 217.0
39 TraesCS3B01G474200 chr7A 84.028 144 16 5 1626 1766 316025750 316025889 9.430000e-27 132.0
40 TraesCS3B01G474200 chr7A 97.619 42 1 0 4139 4180 677846358 677846317 5.800000e-09 73.1
41 TraesCS3B01G474200 chr7A 84.848 66 7 3 4116 4180 541360381 541360444 3.490000e-06 63.9
42 TraesCS3B01G474200 chr7B 86.869 198 16 7 1 188 118244377 118244574 3.270000e-51 213.0
43 TraesCS3B01G474200 chr2A 85.135 148 20 1 380 527 572695685 572695830 2.600000e-32 150.0
44 TraesCS3B01G474200 chr6D 83.766 154 16 7 1600 1749 436650909 436651057 2.030000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G474200 chr3B 723442922 723447101 4179 True 7720.000000 7720 100.000 1 4180 1 chr3B.!!$R4 4179
1 TraesCS3B01G474200 chr3B 723150286 723150804 518 True 433.000000 433 81.905 2662 3180 1 chr3B.!!$R1 518
2 TraesCS3B01G474200 chr3D 546330184 546333707 3523 True 2296.400000 4503 91.338 633 4180 2 chr3D.!!$R5 3547
3 TraesCS3B01G474200 chr3D 546255200 546256563 1363 True 336.000000 411 79.875 1705 3180 2 chr3D.!!$R4 1475
4 TraesCS3B01G474200 chr3A 683186217 683189883 3666 True 1430.666667 2431 89.026 633 4180 3 chr3A.!!$R4 3547
5 TraesCS3B01G474200 chr3A 682988884 682990244 1360 True 344.000000 433 80.045 1705 3180 2 chr3A.!!$R3 1475

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
425 426 0.034896 ATGCGTGGATCCGATAACCC 59.965 55.0 7.39 0.00 0.00 4.11 F
610 611 0.170339 TCAGGATCACTACGTGCACG 59.830 55.0 35.99 35.99 46.33 5.34 F
2329 2545 0.181587 TTGCCGTGGTTCAGGAAGAA 59.818 50.0 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2315 2531 1.266989 CGCCTTTTCTTCCTGAACCAC 59.733 52.381 0.00 0.0 33.88 4.16 R
2342 2558 1.529244 GCAATGGAAGGATCCCCCG 60.529 63.158 8.55 0.0 45.95 5.73 R
3274 3544 0.040204 ATGGCTTAGCTTGGCTTGGT 59.960 50.000 3.59 0.0 40.44 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.307908 AAACGCCGTCGCAACAGC 62.308 61.111 0.00 0.00 39.84 4.40
35 36 2.266055 GGAGCCCGAGGACACAAG 59.734 66.667 0.00 0.00 0.00 3.16
36 37 2.584391 GGAGCCCGAGGACACAAGT 61.584 63.158 0.00 0.00 0.00 3.16
37 38 1.079750 GAGCCCGAGGACACAAGTC 60.080 63.158 0.00 0.00 44.21 3.01
46 47 2.900528 GACACAAGTCCACCACGAG 58.099 57.895 0.00 0.00 38.89 4.18
47 48 0.387929 GACACAAGTCCACCACGAGA 59.612 55.000 0.00 0.00 38.89 4.04
48 49 0.828022 ACACAAGTCCACCACGAGAA 59.172 50.000 0.00 0.00 0.00 2.87
49 50 1.416401 ACACAAGTCCACCACGAGAAT 59.584 47.619 0.00 0.00 0.00 2.40
50 51 1.800586 CACAAGTCCACCACGAGAATG 59.199 52.381 0.00 0.00 0.00 2.67
51 52 0.798776 CAAGTCCACCACGAGAATGC 59.201 55.000 0.00 0.00 0.00 3.56
52 53 0.321653 AAGTCCACCACGAGAATGCC 60.322 55.000 0.00 0.00 0.00 4.40
53 54 2.100631 GTCCACCACGAGAATGCCG 61.101 63.158 0.00 0.00 0.00 5.69
54 55 3.499737 CCACCACGAGAATGCCGC 61.500 66.667 0.00 0.00 0.00 6.53
55 56 3.499737 CACCACGAGAATGCCGCC 61.500 66.667 0.00 0.00 0.00 6.13
73 74 4.849310 GCCGCCGCACCATCCTTA 62.849 66.667 0.00 0.00 34.03 2.69
74 75 2.895372 CCGCCGCACCATCCTTAC 60.895 66.667 0.00 0.00 0.00 2.34
75 76 2.186903 CGCCGCACCATCCTTACT 59.813 61.111 0.00 0.00 0.00 2.24
76 77 1.449601 CGCCGCACCATCCTTACTT 60.450 57.895 0.00 0.00 0.00 2.24
77 78 1.429148 CGCCGCACCATCCTTACTTC 61.429 60.000 0.00 0.00 0.00 3.01
78 79 0.392461 GCCGCACCATCCTTACTTCA 60.392 55.000 0.00 0.00 0.00 3.02
79 80 1.948611 GCCGCACCATCCTTACTTCAA 60.949 52.381 0.00 0.00 0.00 2.69
80 81 1.737793 CCGCACCATCCTTACTTCAAC 59.262 52.381 0.00 0.00 0.00 3.18
81 82 2.422597 CGCACCATCCTTACTTCAACA 58.577 47.619 0.00 0.00 0.00 3.33
82 83 2.416547 CGCACCATCCTTACTTCAACAG 59.583 50.000 0.00 0.00 0.00 3.16
83 84 3.412386 GCACCATCCTTACTTCAACAGT 58.588 45.455 0.00 0.00 39.87 3.55
84 85 3.437049 GCACCATCCTTACTTCAACAGTC 59.563 47.826 0.00 0.00 36.88 3.51
85 86 4.804261 GCACCATCCTTACTTCAACAGTCT 60.804 45.833 0.00 0.00 36.88 3.24
86 87 4.692625 CACCATCCTTACTTCAACAGTCTG 59.307 45.833 0.00 0.00 36.88 3.51
87 88 4.256920 CCATCCTTACTTCAACAGTCTGG 58.743 47.826 4.53 0.00 36.88 3.86
88 89 4.263068 CCATCCTTACTTCAACAGTCTGGT 60.263 45.833 4.53 0.00 36.88 4.00
89 90 5.308825 CATCCTTACTTCAACAGTCTGGTT 58.691 41.667 4.53 0.00 36.88 3.67
90 91 5.367945 TCCTTACTTCAACAGTCTGGTTT 57.632 39.130 4.53 0.00 36.88 3.27
91 92 5.365619 TCCTTACTTCAACAGTCTGGTTTC 58.634 41.667 4.53 0.00 36.88 2.78
92 93 4.515567 CCTTACTTCAACAGTCTGGTTTCC 59.484 45.833 4.53 0.00 36.88 3.13
93 94 3.644966 ACTTCAACAGTCTGGTTTCCA 57.355 42.857 4.53 0.00 0.00 3.53
94 95 3.963129 ACTTCAACAGTCTGGTTTCCAA 58.037 40.909 4.53 0.00 30.80 3.53
95 96 4.340617 ACTTCAACAGTCTGGTTTCCAAA 58.659 39.130 4.53 0.00 30.80 3.28
96 97 4.956075 ACTTCAACAGTCTGGTTTCCAAAT 59.044 37.500 4.53 0.00 30.80 2.32
97 98 5.067805 ACTTCAACAGTCTGGTTTCCAAATC 59.932 40.000 4.53 0.00 30.80 2.17
98 99 3.888930 TCAACAGTCTGGTTTCCAAATCC 59.111 43.478 4.53 0.00 30.80 3.01
99 100 3.593442 ACAGTCTGGTTTCCAAATCCA 57.407 42.857 4.53 0.00 30.80 3.41
100 101 3.222603 ACAGTCTGGTTTCCAAATCCAC 58.777 45.455 4.53 0.00 30.80 4.02
101 102 2.558359 CAGTCTGGTTTCCAAATCCACC 59.442 50.000 0.00 0.00 30.80 4.61
102 103 1.893137 GTCTGGTTTCCAAATCCACCC 59.107 52.381 0.00 0.00 30.80 4.61
103 104 1.203125 TCTGGTTTCCAAATCCACCCC 60.203 52.381 0.00 0.00 30.80 4.95
104 105 0.563173 TGGTTTCCAAATCCACCCCA 59.437 50.000 0.00 0.00 0.00 4.96
105 106 1.062121 TGGTTTCCAAATCCACCCCAA 60.062 47.619 0.00 0.00 0.00 4.12
106 107 2.050918 GGTTTCCAAATCCACCCCAAA 58.949 47.619 0.00 0.00 0.00 3.28
107 108 2.439880 GGTTTCCAAATCCACCCCAAAA 59.560 45.455 0.00 0.00 0.00 2.44
108 109 3.495983 GGTTTCCAAATCCACCCCAAAAG 60.496 47.826 0.00 0.00 0.00 2.27
109 110 1.347062 TCCAAATCCACCCCAAAAGC 58.653 50.000 0.00 0.00 0.00 3.51
110 111 0.037419 CCAAATCCACCCCAAAAGCG 60.037 55.000 0.00 0.00 0.00 4.68
111 112 0.037419 CAAATCCACCCCAAAAGCGG 60.037 55.000 0.00 0.00 0.00 5.52
112 113 0.178947 AAATCCACCCCAAAAGCGGA 60.179 50.000 0.00 0.00 0.00 5.54
113 114 0.041090 AATCCACCCCAAAAGCGGAT 59.959 50.000 0.00 0.00 38.11 4.18
114 115 0.395724 ATCCACCCCAAAAGCGGATC 60.396 55.000 0.00 0.00 30.51 3.36
115 116 2.406616 CCACCCCAAAAGCGGATCG 61.407 63.158 0.00 0.00 0.00 3.69
127 128 3.635433 CGGATCGCCTCGTTAGAAA 57.365 52.632 0.00 0.00 0.00 2.52
128 129 1.917273 CGGATCGCCTCGTTAGAAAA 58.083 50.000 0.00 0.00 0.00 2.29
129 130 2.264813 CGGATCGCCTCGTTAGAAAAA 58.735 47.619 0.00 0.00 0.00 1.94
130 131 2.281762 CGGATCGCCTCGTTAGAAAAAG 59.718 50.000 0.00 0.00 0.00 2.27
131 132 3.518590 GGATCGCCTCGTTAGAAAAAGA 58.481 45.455 0.00 0.00 0.00 2.52
132 133 4.120589 GGATCGCCTCGTTAGAAAAAGAT 58.879 43.478 0.00 0.00 0.00 2.40
133 134 4.209495 GGATCGCCTCGTTAGAAAAAGATC 59.791 45.833 0.00 0.00 33.34 2.75
134 135 4.451629 TCGCCTCGTTAGAAAAAGATCT 57.548 40.909 0.00 0.00 0.00 2.75
135 136 4.174009 TCGCCTCGTTAGAAAAAGATCTG 58.826 43.478 0.00 0.00 0.00 2.90
136 137 4.082408 TCGCCTCGTTAGAAAAAGATCTGA 60.082 41.667 0.00 0.00 0.00 3.27
137 138 4.625742 CGCCTCGTTAGAAAAAGATCTGAA 59.374 41.667 0.00 0.00 0.00 3.02
138 139 5.220303 CGCCTCGTTAGAAAAAGATCTGAAG 60.220 44.000 0.00 0.00 0.00 3.02
139 140 5.869888 GCCTCGTTAGAAAAAGATCTGAAGA 59.130 40.000 0.00 0.00 0.00 2.87
140 141 6.536941 GCCTCGTTAGAAAAAGATCTGAAGAT 59.463 38.462 0.00 0.00 37.51 2.40
141 142 7.065204 GCCTCGTTAGAAAAAGATCTGAAGATT 59.935 37.037 0.00 0.00 34.37 2.40
142 143 8.940952 CCTCGTTAGAAAAAGATCTGAAGATTT 58.059 33.333 0.00 0.00 34.37 2.17
152 153 7.954788 AAGATCTGAAGATTTATTAGTCGGC 57.045 36.000 0.00 0.00 34.37 5.54
153 154 6.153067 AGATCTGAAGATTTATTAGTCGGCG 58.847 40.000 0.00 0.00 34.37 6.46
154 155 4.049186 TCTGAAGATTTATTAGTCGGCGC 58.951 43.478 0.00 0.00 0.00 6.53
155 156 3.787785 TGAAGATTTATTAGTCGGCGCA 58.212 40.909 10.83 0.00 0.00 6.09
156 157 3.554324 TGAAGATTTATTAGTCGGCGCAC 59.446 43.478 10.83 0.00 0.00 5.34
157 158 2.480845 AGATTTATTAGTCGGCGCACC 58.519 47.619 10.83 0.00 0.00 5.01
158 159 2.159014 AGATTTATTAGTCGGCGCACCA 60.159 45.455 10.83 0.00 34.57 4.17
159 160 1.361793 TTTATTAGTCGGCGCACCAC 58.638 50.000 10.83 1.46 34.57 4.16
160 161 0.460635 TTATTAGTCGGCGCACCACC 60.461 55.000 10.83 0.00 34.57 4.61
169 170 3.803082 CGCACCACCGAAGCCATG 61.803 66.667 0.00 0.00 0.00 3.66
170 171 2.359850 GCACCACCGAAGCCATGA 60.360 61.111 0.00 0.00 0.00 3.07
171 172 2.690778 GCACCACCGAAGCCATGAC 61.691 63.158 0.00 0.00 0.00 3.06
172 173 1.003355 CACCACCGAAGCCATGACT 60.003 57.895 0.00 0.00 0.00 3.41
173 174 0.249120 CACCACCGAAGCCATGACTA 59.751 55.000 0.00 0.00 0.00 2.59
174 175 1.134401 CACCACCGAAGCCATGACTAT 60.134 52.381 0.00 0.00 0.00 2.12
175 176 1.134401 ACCACCGAAGCCATGACTATG 60.134 52.381 0.00 0.00 0.00 2.23
176 177 1.138859 CCACCGAAGCCATGACTATGA 59.861 52.381 0.00 0.00 36.36 2.15
177 178 2.477825 CACCGAAGCCATGACTATGAG 58.522 52.381 0.00 0.00 36.36 2.90
178 179 1.202580 ACCGAAGCCATGACTATGAGC 60.203 52.381 0.00 0.00 36.36 4.26
179 180 1.202568 CCGAAGCCATGACTATGAGCA 60.203 52.381 0.00 0.00 36.36 4.26
180 181 2.554142 CGAAGCCATGACTATGAGCAA 58.446 47.619 0.00 0.00 36.36 3.91
181 182 2.286294 CGAAGCCATGACTATGAGCAAC 59.714 50.000 0.00 0.00 36.36 4.17
182 183 2.338577 AGCCATGACTATGAGCAACC 57.661 50.000 0.00 0.00 36.36 3.77
183 184 1.133976 AGCCATGACTATGAGCAACCC 60.134 52.381 0.00 0.00 36.36 4.11
184 185 1.408683 GCCATGACTATGAGCAACCCA 60.409 52.381 0.00 0.00 36.36 4.51
185 186 2.945440 GCCATGACTATGAGCAACCCAA 60.945 50.000 0.00 0.00 36.36 4.12
186 187 3.355378 CCATGACTATGAGCAACCCAAA 58.645 45.455 0.00 0.00 36.36 3.28
187 188 3.763360 CCATGACTATGAGCAACCCAAAA 59.237 43.478 0.00 0.00 36.36 2.44
188 189 4.403432 CCATGACTATGAGCAACCCAAAAT 59.597 41.667 0.00 0.00 36.36 1.82
189 190 5.450965 CCATGACTATGAGCAACCCAAAATC 60.451 44.000 0.00 0.00 36.36 2.17
190 191 4.016444 TGACTATGAGCAACCCAAAATCC 58.984 43.478 0.00 0.00 0.00 3.01
191 192 4.263905 TGACTATGAGCAACCCAAAATCCT 60.264 41.667 0.00 0.00 0.00 3.24
192 193 5.045213 TGACTATGAGCAACCCAAAATCCTA 60.045 40.000 0.00 0.00 0.00 2.94
193 194 5.826643 ACTATGAGCAACCCAAAATCCTAA 58.173 37.500 0.00 0.00 0.00 2.69
194 195 5.888161 ACTATGAGCAACCCAAAATCCTAAG 59.112 40.000 0.00 0.00 0.00 2.18
195 196 3.430453 TGAGCAACCCAAAATCCTAAGG 58.570 45.455 0.00 0.00 0.00 2.69
196 197 2.166459 GAGCAACCCAAAATCCTAAGGC 59.834 50.000 0.00 0.00 0.00 4.35
197 198 1.207089 GCAACCCAAAATCCTAAGGCC 59.793 52.381 0.00 0.00 0.00 5.19
198 199 2.820178 CAACCCAAAATCCTAAGGCCT 58.180 47.619 0.00 0.00 0.00 5.19
199 200 3.173151 CAACCCAAAATCCTAAGGCCTT 58.827 45.455 24.18 24.18 0.00 4.35
200 201 4.349365 CAACCCAAAATCCTAAGGCCTTA 58.651 43.478 23.79 23.79 0.00 2.69
201 202 4.899898 ACCCAAAATCCTAAGGCCTTAT 57.100 40.909 25.37 9.63 0.00 1.73
202 203 6.133356 CAACCCAAAATCCTAAGGCCTTATA 58.867 40.000 25.37 16.65 0.00 0.98
203 204 5.702266 ACCCAAAATCCTAAGGCCTTATAC 58.298 41.667 25.37 0.00 0.00 1.47
204 205 5.194942 ACCCAAAATCCTAAGGCCTTATACA 59.805 40.000 25.37 12.48 0.00 2.29
205 206 6.133356 CCCAAAATCCTAAGGCCTTATACAA 58.867 40.000 25.37 11.48 0.00 2.41
206 207 6.782494 CCCAAAATCCTAAGGCCTTATACAAT 59.218 38.462 25.37 13.12 0.00 2.71
207 208 7.255942 CCCAAAATCCTAAGGCCTTATACAATG 60.256 40.741 25.37 18.02 0.00 2.82
208 209 7.255942 CCAAAATCCTAAGGCCTTATACAATGG 60.256 40.741 25.37 22.07 0.00 3.16
209 210 6.780198 AATCCTAAGGCCTTATACAATGGA 57.220 37.500 25.37 24.47 0.00 3.41
210 211 6.780198 ATCCTAAGGCCTTATACAATGGAA 57.220 37.500 25.37 11.79 0.00 3.53
211 212 6.187727 TCCTAAGGCCTTATACAATGGAAG 57.812 41.667 25.37 11.29 0.00 3.46
212 213 5.073144 TCCTAAGGCCTTATACAATGGAAGG 59.927 44.000 25.37 19.49 42.32 3.46
213 214 4.881157 AAGGCCTTATACAATGGAAGGT 57.119 40.909 18.87 0.00 41.60 3.50
214 215 4.170468 AGGCCTTATACAATGGAAGGTG 57.830 45.455 0.00 0.00 41.60 4.00
215 216 2.623416 GGCCTTATACAATGGAAGGTGC 59.377 50.000 0.00 0.87 41.60 5.01
216 217 3.555966 GCCTTATACAATGGAAGGTGCT 58.444 45.455 10.96 0.00 41.60 4.40
217 218 3.954258 GCCTTATACAATGGAAGGTGCTT 59.046 43.478 10.96 0.00 41.60 3.91
218 219 5.130350 GCCTTATACAATGGAAGGTGCTTA 58.870 41.667 10.96 0.00 41.60 3.09
219 220 5.239525 GCCTTATACAATGGAAGGTGCTTAG 59.760 44.000 10.96 0.00 41.60 2.18
220 221 6.591935 CCTTATACAATGGAAGGTGCTTAGA 58.408 40.000 3.55 0.00 35.89 2.10
221 222 6.708054 CCTTATACAATGGAAGGTGCTTAGAG 59.292 42.308 3.55 0.00 35.89 2.43
222 223 5.957771 ATACAATGGAAGGTGCTTAGAGA 57.042 39.130 0.00 0.00 0.00 3.10
223 224 4.640771 ACAATGGAAGGTGCTTAGAGAA 57.359 40.909 0.00 0.00 0.00 2.87
224 225 4.985538 ACAATGGAAGGTGCTTAGAGAAA 58.014 39.130 0.00 0.00 0.00 2.52
225 226 5.574188 ACAATGGAAGGTGCTTAGAGAAAT 58.426 37.500 0.00 0.00 0.00 2.17
226 227 6.721318 ACAATGGAAGGTGCTTAGAGAAATA 58.279 36.000 0.00 0.00 0.00 1.40
227 228 7.175104 ACAATGGAAGGTGCTTAGAGAAATAA 58.825 34.615 0.00 0.00 0.00 1.40
228 229 7.669722 ACAATGGAAGGTGCTTAGAGAAATAAA 59.330 33.333 0.00 0.00 0.00 1.40
229 230 8.689972 CAATGGAAGGTGCTTAGAGAAATAAAT 58.310 33.333 0.00 0.00 0.00 1.40
230 231 7.865706 TGGAAGGTGCTTAGAGAAATAAATC 57.134 36.000 0.00 0.00 0.00 2.17
231 232 6.538742 TGGAAGGTGCTTAGAGAAATAAATCG 59.461 38.462 0.00 0.00 0.00 3.34
232 233 6.017852 GGAAGGTGCTTAGAGAAATAAATCGG 60.018 42.308 0.00 0.00 0.00 4.18
233 234 5.368989 AGGTGCTTAGAGAAATAAATCGGG 58.631 41.667 0.00 0.00 0.00 5.14
234 235 4.023963 GGTGCTTAGAGAAATAAATCGGGC 60.024 45.833 0.00 0.00 0.00 6.13
235 236 4.816925 GTGCTTAGAGAAATAAATCGGGCT 59.183 41.667 0.00 0.00 0.00 5.19
236 237 5.297029 GTGCTTAGAGAAATAAATCGGGCTT 59.703 40.000 0.00 0.00 0.00 4.35
237 238 5.885912 TGCTTAGAGAAATAAATCGGGCTTT 59.114 36.000 0.00 0.00 0.00 3.51
238 239 6.377146 TGCTTAGAGAAATAAATCGGGCTTTT 59.623 34.615 0.00 0.00 0.00 2.27
239 240 6.913132 GCTTAGAGAAATAAATCGGGCTTTTC 59.087 38.462 0.00 0.00 0.00 2.29
240 241 7.201741 GCTTAGAGAAATAAATCGGGCTTTTCT 60.202 37.037 0.00 0.00 38.86 2.52
241 242 8.575649 TTAGAGAAATAAATCGGGCTTTTCTT 57.424 30.769 0.00 0.00 36.91 2.52
242 243 9.675464 TTAGAGAAATAAATCGGGCTTTTCTTA 57.325 29.630 0.00 0.00 36.91 2.10
243 244 8.575649 AGAGAAATAAATCGGGCTTTTCTTAA 57.424 30.769 0.00 0.00 36.91 1.85
244 245 8.678199 AGAGAAATAAATCGGGCTTTTCTTAAG 58.322 33.333 0.00 0.00 36.91 1.85
245 246 7.258441 AGAAATAAATCGGGCTTTTCTTAAGC 58.742 34.615 0.00 0.98 42.30 3.09
246 247 6.524101 AATAAATCGGGCTTTTCTTAAGCA 57.476 33.333 11.18 0.00 44.71 3.91
247 248 3.850122 AATCGGGCTTTTCTTAAGCAC 57.150 42.857 11.18 6.75 44.71 4.40
248 249 1.530323 TCGGGCTTTTCTTAAGCACC 58.470 50.000 11.18 8.74 43.49 5.01
249 250 1.202830 TCGGGCTTTTCTTAAGCACCA 60.203 47.619 11.18 0.00 43.49 4.17
250 251 1.200020 CGGGCTTTTCTTAAGCACCAG 59.800 52.381 11.18 4.19 43.49 4.00
251 252 2.239400 GGGCTTTTCTTAAGCACCAGT 58.761 47.619 11.18 0.00 44.71 4.00
252 253 2.029918 GGGCTTTTCTTAAGCACCAGTG 60.030 50.000 11.18 0.00 44.71 3.66
266 267 4.685169 CACCAGTGCTTATTTGTACAGG 57.315 45.455 0.00 0.00 35.86 4.00
267 268 4.323417 CACCAGTGCTTATTTGTACAGGA 58.677 43.478 0.00 0.00 34.41 3.86
268 269 4.943705 CACCAGTGCTTATTTGTACAGGAT 59.056 41.667 0.00 0.00 34.41 3.24
269 270 6.112734 CACCAGTGCTTATTTGTACAGGATA 58.887 40.000 0.00 0.00 34.41 2.59
270 271 6.258727 CACCAGTGCTTATTTGTACAGGATAG 59.741 42.308 0.00 0.00 34.41 2.08
271 272 6.156256 ACCAGTGCTTATTTGTACAGGATAGA 59.844 38.462 0.00 0.00 34.41 1.98
272 273 6.480320 CCAGTGCTTATTTGTACAGGATAGAC 59.520 42.308 0.00 0.00 32.63 2.59
273 274 6.199154 CAGTGCTTATTTGTACAGGATAGACG 59.801 42.308 0.00 0.00 0.00 4.18
274 275 5.047847 TGCTTATTTGTACAGGATAGACGC 58.952 41.667 0.00 4.64 0.00 5.19
275 276 5.163447 TGCTTATTTGTACAGGATAGACGCT 60.163 40.000 0.00 0.00 0.00 5.07
276 277 5.753921 GCTTATTTGTACAGGATAGACGCTT 59.246 40.000 0.00 0.00 0.00 4.68
277 278 6.921857 GCTTATTTGTACAGGATAGACGCTTA 59.078 38.462 0.00 0.00 0.00 3.09
278 279 7.437267 GCTTATTTGTACAGGATAGACGCTTAA 59.563 37.037 0.00 0.00 0.00 1.85
279 280 8.638685 TTATTTGTACAGGATAGACGCTTAAC 57.361 34.615 0.00 0.00 0.00 2.01
280 281 5.909621 TTGTACAGGATAGACGCTTAACT 57.090 39.130 0.00 0.00 0.00 2.24
281 282 7.395190 TTTGTACAGGATAGACGCTTAACTA 57.605 36.000 0.00 0.00 0.00 2.24
282 283 7.395190 TTGTACAGGATAGACGCTTAACTAA 57.605 36.000 0.00 0.00 0.00 2.24
283 284 7.024340 TGTACAGGATAGACGCTTAACTAAG 57.976 40.000 0.00 0.00 36.40 2.18
295 296 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
296 297 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
297 298 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
298 299 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
299 300 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
300 301 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
301 302 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
302 303 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
303 304 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
304 305 3.886505 AGCGTCTCTCCTGTAGAAATAGG 59.113 47.826 0.00 0.00 35.36 2.57
305 306 3.551250 GCGTCTCTCCTGTAGAAATAGGC 60.551 52.174 0.00 0.00 34.08 3.93
306 307 3.632604 CGTCTCTCCTGTAGAAATAGGCA 59.367 47.826 0.00 0.00 34.08 4.75
307 308 4.498345 CGTCTCTCCTGTAGAAATAGGCAC 60.498 50.000 0.00 0.00 34.08 5.01
308 309 3.961408 TCTCTCCTGTAGAAATAGGCACC 59.039 47.826 0.00 0.00 34.08 5.01
309 310 2.693591 TCTCCTGTAGAAATAGGCACCG 59.306 50.000 0.00 0.00 34.08 4.94
310 311 1.760613 TCCTGTAGAAATAGGCACCGG 59.239 52.381 0.00 0.00 34.08 5.28
311 312 1.485066 CCTGTAGAAATAGGCACCGGT 59.515 52.381 0.00 0.00 0.00 5.28
312 313 2.550978 CTGTAGAAATAGGCACCGGTG 58.449 52.381 30.66 30.66 0.00 4.94
346 347 9.758651 AAAAACTCGGTTTATTTTTCTAAGCAT 57.241 25.926 3.01 0.00 34.43 3.79
347 348 8.965986 AAACTCGGTTTATTTTTCTAAGCATC 57.034 30.769 0.86 0.00 33.70 3.91
348 349 7.923414 ACTCGGTTTATTTTTCTAAGCATCT 57.077 32.000 0.00 0.00 0.00 2.90
349 350 8.336801 ACTCGGTTTATTTTTCTAAGCATCTT 57.663 30.769 0.00 0.00 0.00 2.40
350 351 8.793592 ACTCGGTTTATTTTTCTAAGCATCTTT 58.206 29.630 0.00 0.00 0.00 2.52
351 352 9.278734 CTCGGTTTATTTTTCTAAGCATCTTTC 57.721 33.333 0.00 0.00 0.00 2.62
352 353 8.241367 TCGGTTTATTTTTCTAAGCATCTTTCC 58.759 33.333 0.00 0.00 0.00 3.13
353 354 8.244113 CGGTTTATTTTTCTAAGCATCTTTCCT 58.756 33.333 0.00 0.00 0.00 3.36
359 360 9.914131 ATTTTTCTAAGCATCTTTCCTAAACAC 57.086 29.630 0.00 0.00 0.00 3.32
360 361 7.448748 TTTCTAAGCATCTTTCCTAAACACC 57.551 36.000 0.00 0.00 0.00 4.16
361 362 6.374417 TCTAAGCATCTTTCCTAAACACCT 57.626 37.500 0.00 0.00 0.00 4.00
362 363 6.779860 TCTAAGCATCTTTCCTAAACACCTT 58.220 36.000 0.00 0.00 0.00 3.50
363 364 7.231467 TCTAAGCATCTTTCCTAAACACCTTT 58.769 34.615 0.00 0.00 0.00 3.11
364 365 5.966742 AGCATCTTTCCTAAACACCTTTC 57.033 39.130 0.00 0.00 0.00 2.62
365 366 5.385198 AGCATCTTTCCTAAACACCTTTCA 58.615 37.500 0.00 0.00 0.00 2.69
366 367 6.012745 AGCATCTTTCCTAAACACCTTTCAT 58.987 36.000 0.00 0.00 0.00 2.57
367 368 6.494835 AGCATCTTTCCTAAACACCTTTCATT 59.505 34.615 0.00 0.00 0.00 2.57
368 369 6.587608 GCATCTTTCCTAAACACCTTTCATTG 59.412 38.462 0.00 0.00 0.00 2.82
369 370 7.661040 CATCTTTCCTAAACACCTTTCATTGT 58.339 34.615 0.00 0.00 0.00 2.71
370 371 8.792633 CATCTTTCCTAAACACCTTTCATTGTA 58.207 33.333 0.00 0.00 0.00 2.41
371 372 8.161699 TCTTTCCTAAACACCTTTCATTGTAC 57.838 34.615 0.00 0.00 0.00 2.90
372 373 7.776030 TCTTTCCTAAACACCTTTCATTGTACA 59.224 33.333 0.00 0.00 0.00 2.90
373 374 7.883391 TTCCTAAACACCTTTCATTGTACAA 57.117 32.000 11.41 11.41 0.00 2.41
374 375 7.504924 TCCTAAACACCTTTCATTGTACAAG 57.495 36.000 14.65 6.58 0.00 3.16
375 376 6.488683 TCCTAAACACCTTTCATTGTACAAGG 59.511 38.462 13.96 13.96 42.59 3.61
376 377 4.584327 AACACCTTTCATTGTACAAGGC 57.416 40.909 15.24 0.00 40.85 4.35
377 378 2.890945 ACACCTTTCATTGTACAAGGCC 59.109 45.455 15.24 0.00 40.85 5.19
378 379 3.157087 CACCTTTCATTGTACAAGGCCT 58.843 45.455 15.24 0.00 40.85 5.19
379 380 4.202524 ACACCTTTCATTGTACAAGGCCTA 60.203 41.667 15.24 0.90 40.85 3.93
380 381 4.764823 CACCTTTCATTGTACAAGGCCTAA 59.235 41.667 15.24 8.34 40.85 2.69
381 382 5.010282 ACCTTTCATTGTACAAGGCCTAAG 58.990 41.667 15.24 15.75 40.85 2.18
382 383 5.222048 ACCTTTCATTGTACAAGGCCTAAGA 60.222 40.000 15.24 0.00 40.85 2.10
383 384 5.710099 CCTTTCATTGTACAAGGCCTAAGAA 59.290 40.000 15.24 0.00 30.94 2.52
384 385 6.208599 CCTTTCATTGTACAAGGCCTAAGAAA 59.791 38.462 15.24 3.31 30.94 2.52
385 386 6.569179 TTCATTGTACAAGGCCTAAGAAAC 57.431 37.500 15.24 7.02 0.00 2.78
386 387 5.876357 TCATTGTACAAGGCCTAAGAAACT 58.124 37.500 15.24 0.00 0.00 2.66
387 388 7.011499 TCATTGTACAAGGCCTAAGAAACTA 57.989 36.000 15.24 4.11 0.00 2.24
388 389 7.455058 TCATTGTACAAGGCCTAAGAAACTAA 58.545 34.615 15.24 4.73 0.00 2.24
389 390 8.107095 TCATTGTACAAGGCCTAAGAAACTAAT 58.893 33.333 15.24 6.50 0.00 1.73
390 391 7.681939 TTGTACAAGGCCTAAGAAACTAATG 57.318 36.000 5.16 0.00 0.00 1.90
391 392 6.177610 TGTACAAGGCCTAAGAAACTAATGG 58.822 40.000 5.16 0.00 0.00 3.16
392 393 4.017126 ACAAGGCCTAAGAAACTAATGGC 58.983 43.478 5.16 0.00 39.61 4.40
393 394 4.263949 ACAAGGCCTAAGAAACTAATGGCT 60.264 41.667 5.16 0.00 40.15 4.75
394 395 5.045140 ACAAGGCCTAAGAAACTAATGGCTA 60.045 40.000 5.16 0.00 40.15 3.93
395 396 5.710409 AGGCCTAAGAAACTAATGGCTAA 57.290 39.130 1.29 0.00 40.15 3.09
396 397 6.074698 AGGCCTAAGAAACTAATGGCTAAA 57.925 37.500 1.29 0.00 40.15 1.85
397 398 6.490492 AGGCCTAAGAAACTAATGGCTAAAA 58.510 36.000 1.29 0.00 40.15 1.52
398 399 6.377429 AGGCCTAAGAAACTAATGGCTAAAAC 59.623 38.462 1.29 0.00 40.15 2.43
399 400 6.152154 GGCCTAAGAAACTAATGGCTAAAACA 59.848 38.462 0.00 0.00 40.15 2.83
400 401 7.309560 GGCCTAAGAAACTAATGGCTAAAACAA 60.310 37.037 0.00 0.00 40.15 2.83
401 402 8.251026 GCCTAAGAAACTAATGGCTAAAACAAT 58.749 33.333 0.00 0.00 37.58 2.71
402 403 9.788960 CCTAAGAAACTAATGGCTAAAACAATC 57.211 33.333 0.00 0.00 0.00 2.67
403 404 9.788960 CTAAGAAACTAATGGCTAAAACAATCC 57.211 33.333 0.00 0.00 0.00 3.01
404 405 7.775053 AGAAACTAATGGCTAAAACAATCCA 57.225 32.000 0.00 0.00 0.00 3.41
405 406 7.602753 AGAAACTAATGGCTAAAACAATCCAC 58.397 34.615 0.00 0.00 0.00 4.02
406 407 6.909550 AACTAATGGCTAAAACAATCCACA 57.090 33.333 0.00 0.00 0.00 4.17
407 408 7.480760 AACTAATGGCTAAAACAATCCACAT 57.519 32.000 0.00 0.00 0.00 3.21
408 409 6.866480 ACTAATGGCTAAAACAATCCACATG 58.134 36.000 0.00 0.00 0.00 3.21
409 410 3.591196 TGGCTAAAACAATCCACATGC 57.409 42.857 0.00 0.00 0.00 4.06
410 411 2.094803 TGGCTAAAACAATCCACATGCG 60.095 45.455 0.00 0.00 0.00 4.73
411 412 2.094752 GGCTAAAACAATCCACATGCGT 60.095 45.455 0.00 0.00 0.00 5.24
412 413 2.916716 GCTAAAACAATCCACATGCGTG 59.083 45.455 3.82 3.82 43.21 5.34
420 421 4.443857 CACATGCGTGGATCCGAT 57.556 55.556 11.36 0.00 39.64 4.18
421 422 3.586430 CACATGCGTGGATCCGATA 57.414 52.632 11.36 0.00 39.64 2.92
422 423 1.864565 CACATGCGTGGATCCGATAA 58.135 50.000 11.36 0.00 39.64 1.75
423 424 1.526887 CACATGCGTGGATCCGATAAC 59.473 52.381 11.36 0.00 39.64 1.89
424 425 1.148310 CATGCGTGGATCCGATAACC 58.852 55.000 7.39 0.00 0.00 2.85
425 426 0.034896 ATGCGTGGATCCGATAACCC 59.965 55.000 7.39 0.00 0.00 4.11
426 427 1.301479 GCGTGGATCCGATAACCCC 60.301 63.158 7.39 0.00 0.00 4.95
427 428 1.370064 CGTGGATCCGATAACCCCC 59.630 63.158 7.39 0.00 0.00 5.40
441 442 3.706373 CCCCCTCACCACTGTCGG 61.706 72.222 0.00 0.00 0.00 4.79
442 443 4.394712 CCCCTCACCACTGTCGGC 62.395 72.222 0.00 0.00 0.00 5.54
443 444 4.394712 CCCTCACCACTGTCGGCC 62.395 72.222 0.00 0.00 0.00 6.13
444 445 3.625897 CCTCACCACTGTCGGCCA 61.626 66.667 2.24 0.00 0.00 5.36
445 446 2.425592 CTCACCACTGTCGGCCAA 59.574 61.111 2.24 0.00 0.00 4.52
446 447 1.669115 CTCACCACTGTCGGCCAAG 60.669 63.158 2.24 0.00 0.00 3.61
447 448 2.669569 CACCACTGTCGGCCAAGG 60.670 66.667 2.24 0.00 0.00 3.61
448 449 3.168528 ACCACTGTCGGCCAAGGT 61.169 61.111 2.24 0.00 0.00 3.50
449 450 2.358737 CCACTGTCGGCCAAGGTC 60.359 66.667 2.24 0.00 0.00 3.85
450 451 2.738521 CACTGTCGGCCAAGGTCG 60.739 66.667 6.80 6.80 45.47 4.79
451 452 3.231736 ACTGTCGGCCAAGGTCGT 61.232 61.111 13.30 0.00 44.32 4.34
452 453 2.432628 CTGTCGGCCAAGGTCGTC 60.433 66.667 13.30 8.22 44.32 4.20
453 454 3.934391 CTGTCGGCCAAGGTCGTCC 62.934 68.421 13.30 5.86 44.32 4.79
460 461 2.261671 CAAGGTCGTCCGTGGAGG 59.738 66.667 6.73 2.18 39.06 4.30
461 462 2.995574 AAGGTCGTCCGTGGAGGG 60.996 66.667 8.60 0.00 41.52 4.30
464 465 3.450115 GTCGTCCGTGGAGGGGAG 61.450 72.222 8.60 0.00 41.52 4.30
513 514 4.767255 GTGGCGGCAGGAGGTGAG 62.767 72.222 13.91 0.00 0.00 3.51
515 516 3.474570 GGCGGCAGGAGGTGAGAT 61.475 66.667 3.07 0.00 0.00 2.75
516 517 2.107953 GCGGCAGGAGGTGAGATC 59.892 66.667 0.00 0.00 0.00 2.75
517 518 2.415010 CGGCAGGAGGTGAGATCG 59.585 66.667 0.00 0.00 0.00 3.69
518 519 2.107953 GGCAGGAGGTGAGATCGC 59.892 66.667 0.00 0.00 0.00 4.58
519 520 2.107953 GCAGGAGGTGAGATCGCC 59.892 66.667 4.18 4.18 46.57 5.54
528 529 2.979240 GGTGAGATCGCCTTTCTTTCT 58.021 47.619 5.15 0.00 43.02 2.52
529 530 2.675348 GGTGAGATCGCCTTTCTTTCTG 59.325 50.000 5.15 0.00 43.02 3.02
530 531 2.095053 GTGAGATCGCCTTTCTTTCTGC 59.905 50.000 0.00 0.00 0.00 4.26
532 533 1.079503 GATCGCCTTTCTTTCTGCGT 58.920 50.000 0.00 0.00 46.57 5.24
533 534 2.094182 AGATCGCCTTTCTTTCTGCGTA 60.094 45.455 0.00 0.00 46.57 4.42
534 535 2.380084 TCGCCTTTCTTTCTGCGTAT 57.620 45.000 0.00 0.00 46.57 3.06
535 536 1.999735 TCGCCTTTCTTTCTGCGTATG 59.000 47.619 0.00 0.00 46.57 2.39
536 537 1.999735 CGCCTTTCTTTCTGCGTATGA 59.000 47.619 0.00 0.00 41.95 2.15
537 538 2.609459 CGCCTTTCTTTCTGCGTATGAT 59.391 45.455 0.00 0.00 41.95 2.45
538 539 3.544834 CGCCTTTCTTTCTGCGTATGATG 60.545 47.826 0.00 0.00 41.95 3.07
539 540 3.242870 GCCTTTCTTTCTGCGTATGATGG 60.243 47.826 0.00 0.00 0.00 3.51
540 541 4.191544 CCTTTCTTTCTGCGTATGATGGA 58.808 43.478 0.00 0.00 0.00 3.41
541 542 4.635765 CCTTTCTTTCTGCGTATGATGGAA 59.364 41.667 0.00 0.00 0.00 3.53
542 543 5.447818 CCTTTCTTTCTGCGTATGATGGAAC 60.448 44.000 0.00 0.00 0.00 3.62
555 556 3.012153 TGGAACATGAGAGGGAGGG 57.988 57.895 0.00 0.00 0.00 4.30
556 557 0.621571 TGGAACATGAGAGGGAGGGG 60.622 60.000 0.00 0.00 0.00 4.79
557 558 1.348775 GGAACATGAGAGGGAGGGGG 61.349 65.000 0.00 0.00 0.00 5.40
591 592 8.993424 AGGAACTGTATATCTCATTTTACCTGT 58.007 33.333 0.00 0.00 37.18 4.00
592 593 9.262358 GGAACTGTATATCTCATTTTACCTGTC 57.738 37.037 0.00 0.00 0.00 3.51
593 594 9.817809 GAACTGTATATCTCATTTTACCTGTCA 57.182 33.333 0.00 0.00 0.00 3.58
594 595 9.823647 AACTGTATATCTCATTTTACCTGTCAG 57.176 33.333 0.00 0.00 0.00 3.51
595 596 8.424918 ACTGTATATCTCATTTTACCTGTCAGG 58.575 37.037 17.88 17.88 42.49 3.86
596 597 8.547481 TGTATATCTCATTTTACCTGTCAGGA 57.453 34.615 26.18 6.41 37.67 3.86
597 598 9.159254 TGTATATCTCATTTTACCTGTCAGGAT 57.841 33.333 26.18 11.99 37.67 3.24
598 599 9.646427 GTATATCTCATTTTACCTGTCAGGATC 57.354 37.037 26.18 0.00 37.67 3.36
599 600 6.566079 ATCTCATTTTACCTGTCAGGATCA 57.434 37.500 26.18 7.16 37.67 2.92
600 601 5.734720 TCTCATTTTACCTGTCAGGATCAC 58.265 41.667 26.18 0.00 37.67 3.06
601 602 5.485353 TCTCATTTTACCTGTCAGGATCACT 59.515 40.000 26.18 4.98 37.67 3.41
602 603 6.667848 TCTCATTTTACCTGTCAGGATCACTA 59.332 38.462 26.18 3.91 37.67 2.74
603 604 6.640518 TCATTTTACCTGTCAGGATCACTAC 58.359 40.000 26.18 0.00 37.67 2.73
604 605 4.713824 TTTACCTGTCAGGATCACTACG 57.286 45.455 26.18 0.00 37.67 3.51
605 606 2.217510 ACCTGTCAGGATCACTACGT 57.782 50.000 26.18 0.00 37.67 3.57
606 607 1.819288 ACCTGTCAGGATCACTACGTG 59.181 52.381 26.18 0.00 37.67 4.49
607 608 1.469940 CCTGTCAGGATCACTACGTGC 60.470 57.143 14.26 0.00 37.67 5.34
608 609 1.202348 CTGTCAGGATCACTACGTGCA 59.798 52.381 0.00 0.00 32.98 4.57
609 610 1.067846 TGTCAGGATCACTACGTGCAC 60.068 52.381 6.82 6.82 32.98 4.57
610 611 0.170339 TCAGGATCACTACGTGCACG 59.830 55.000 35.99 35.99 46.33 5.34
611 612 1.153823 AGGATCACTACGTGCACGC 60.154 57.895 37.35 19.58 44.43 5.34
612 613 2.165301 GGATCACTACGTGCACGCC 61.165 63.158 37.35 24.36 44.43 5.68
613 614 1.445410 GATCACTACGTGCACGCCA 60.445 57.895 37.35 24.46 44.43 5.69
614 615 1.683790 GATCACTACGTGCACGCCAC 61.684 60.000 37.35 18.03 44.43 5.01
621 622 2.851104 GTGCACGCCACGAGTAAC 59.149 61.111 0.00 0.00 34.22 2.50
774 783 1.827344 AGCTCATCATTGACACCGAGA 59.173 47.619 7.88 0.00 0.00 4.04
949 993 3.933332 CTGTGTATTTTTCCTCCGTCCTC 59.067 47.826 0.00 0.00 0.00 3.71
1191 1240 2.911484 CCTTTGATGCTCTGGTAGTCC 58.089 52.381 0.00 0.00 0.00 3.85
1265 1326 1.248101 CCCAAAAATCCGCGGTTCCT 61.248 55.000 27.15 5.85 0.00 3.36
1307 1368 1.133388 GGATCTGATTTGGGGGCATCA 60.133 52.381 0.00 0.00 0.00 3.07
1409 1501 2.279741 CAATTCGCCCAAGATCTCGAA 58.720 47.619 16.42 16.42 43.64 3.71
1532 1630 6.554334 TCACCAAACTTTAGACATTACTGC 57.446 37.500 0.00 0.00 0.00 4.40
1533 1631 6.296026 TCACCAAACTTTAGACATTACTGCT 58.704 36.000 0.00 0.00 0.00 4.24
1534 1632 6.770785 TCACCAAACTTTAGACATTACTGCTT 59.229 34.615 0.00 0.00 0.00 3.91
1535 1633 7.934665 TCACCAAACTTTAGACATTACTGCTTA 59.065 33.333 0.00 0.00 0.00 3.09
1536 1634 8.015658 CACCAAACTTTAGACATTACTGCTTAC 58.984 37.037 0.00 0.00 0.00 2.34
1537 1635 7.937394 ACCAAACTTTAGACATTACTGCTTACT 59.063 33.333 0.00 0.00 0.00 2.24
1538 1636 8.230486 CCAAACTTTAGACATTACTGCTTACTG 58.770 37.037 0.00 0.00 0.00 2.74
1557 1655 7.041303 GCTTACTGTATTATTAAACCTCCCTGC 60.041 40.741 0.00 0.00 0.00 4.85
1679 1777 2.358615 TGCTGCGGCAGTACTTGG 60.359 61.111 28.88 5.32 44.28 3.61
1697 1804 6.764308 ACTTGGTTCTCATCATGTTTATGG 57.236 37.500 0.00 0.00 34.97 2.74
1743 1850 0.982852 TGCTGGAGGATGATCCCGTT 60.983 55.000 8.08 0.00 37.19 4.44
1773 1880 1.367659 AGGTGTACGTCTACGAGCTC 58.632 55.000 9.86 2.73 43.02 4.09
2010 2117 1.344438 AGTGCGGTTCAGTTCATCTCA 59.656 47.619 0.00 0.00 0.00 3.27
2013 2120 2.028203 TGCGGTTCAGTTCATCTCATCA 60.028 45.455 0.00 0.00 0.00 3.07
2058 2165 1.474077 GCGGGTGCTGATCATTTCTTT 59.526 47.619 0.00 0.00 38.39 2.52
2067 2174 2.159430 TGATCATTTCTTTGTCGTGCCG 59.841 45.455 0.00 0.00 0.00 5.69
2115 2222 2.493675 TCAGGTGAGTCATAGAGCACAC 59.506 50.000 0.00 0.00 33.09 3.82
2243 2458 8.607441 TTATGTAGCCTAGTCTGCATTTTATG 57.393 34.615 9.66 0.00 39.53 1.90
2306 2522 6.853720 AGAATCTTTCTCTGACATGCATTTG 58.146 36.000 0.00 0.00 34.07 2.32
2329 2545 0.181587 TTGCCGTGGTTCAGGAAGAA 59.818 50.000 0.00 0.00 0.00 2.52
2342 2558 3.502211 TCAGGAAGAAAAGGCGATTGAAC 59.498 43.478 0.00 0.00 0.00 3.18
2431 2647 3.689569 GCCTAAAGGAGGGCTCAATCAAT 60.690 47.826 0.00 0.00 46.81 2.57
2476 2692 6.340522 CCAGAAAATGAAAACTCACCTTGTT 58.659 36.000 0.00 0.00 0.00 2.83
2616 2839 9.736414 ACTCCTCATAATCATCATTCTTAATGG 57.264 33.333 0.12 0.00 39.38 3.16
2723 2990 1.924731 ACCCTCTGTTCGACATCTCA 58.075 50.000 0.00 0.00 0.00 3.27
2732 2999 1.182667 TCGACATCTCAACGGACCAT 58.817 50.000 0.00 0.00 0.00 3.55
2963 3230 1.422161 CCATCCTGACCTCCATCCCC 61.422 65.000 0.00 0.00 0.00 4.81
3069 3336 0.904865 TGACGCCTTCCACCAGATCT 60.905 55.000 0.00 0.00 0.00 2.75
3227 3497 2.884827 TGAGCTGATGATGTTCAGTCG 58.115 47.619 0.00 0.00 44.10 4.18
3229 3499 1.552337 AGCTGATGATGTTCAGTCGGT 59.448 47.619 3.65 0.00 44.10 4.69
3230 3500 1.929836 GCTGATGATGTTCAGTCGGTC 59.070 52.381 3.65 0.00 44.10 4.79
3239 3509 4.268687 CAGTCGGTCTGAACCAGC 57.731 61.111 0.00 0.00 46.86 4.85
3250 3520 0.972134 TGAACCAGCTGAGAGGACTG 59.028 55.000 17.39 0.00 0.00 3.51
3251 3521 1.261480 GAACCAGCTGAGAGGACTGA 58.739 55.000 17.39 0.00 33.10 3.41
3252 3522 1.830477 GAACCAGCTGAGAGGACTGAT 59.170 52.381 17.39 0.00 33.10 2.90
3253 3523 1.193323 ACCAGCTGAGAGGACTGATG 58.807 55.000 17.39 0.00 33.10 3.07
3273 3543 1.340991 GGATGAGTAAGCCCAGCCAAA 60.341 52.381 0.00 0.00 38.61 3.28
3274 3544 2.446435 GATGAGTAAGCCCAGCCAAAA 58.554 47.619 0.00 0.00 0.00 2.44
3276 3546 0.888619 GAGTAAGCCCAGCCAAAACC 59.111 55.000 0.00 0.00 0.00 3.27
3277 3547 0.187361 AGTAAGCCCAGCCAAAACCA 59.813 50.000 0.00 0.00 0.00 3.67
3278 3548 1.044611 GTAAGCCCAGCCAAAACCAA 58.955 50.000 0.00 0.00 0.00 3.67
3279 3549 1.000843 GTAAGCCCAGCCAAAACCAAG 59.999 52.381 0.00 0.00 0.00 3.61
3280 3550 2.031012 GCCCAGCCAAAACCAAGC 59.969 61.111 0.00 0.00 0.00 4.01
3281 3551 2.743060 CCCAGCCAAAACCAAGCC 59.257 61.111 0.00 0.00 0.00 4.35
3282 3552 2.139484 CCCAGCCAAAACCAAGCCA 61.139 57.895 0.00 0.00 0.00 4.75
3283 3553 1.694133 CCCAGCCAAAACCAAGCCAA 61.694 55.000 0.00 0.00 0.00 4.52
3284 3554 0.249996 CCAGCCAAAACCAAGCCAAG 60.250 55.000 0.00 0.00 0.00 3.61
3285 3555 0.881600 CAGCCAAAACCAAGCCAAGC 60.882 55.000 0.00 0.00 0.00 4.01
3286 3556 1.050421 AGCCAAAACCAAGCCAAGCT 61.050 50.000 0.00 0.00 42.56 3.74
3521 3798 2.939022 GCCGATCTGTAATGGCGC 59.061 61.111 0.00 0.00 37.81 6.53
3586 3864 2.961510 ACAGAGGCAGAGAGATATGCT 58.038 47.619 0.00 0.00 42.19 3.79
3587 3865 3.307506 ACAGAGGCAGAGAGATATGCTT 58.692 45.455 0.00 0.00 42.19 3.91
3588 3866 3.069872 ACAGAGGCAGAGAGATATGCTTG 59.930 47.826 0.00 0.00 42.19 4.01
3589 3867 3.069872 CAGAGGCAGAGAGATATGCTTGT 59.930 47.826 0.00 0.00 42.19 3.16
3590 3868 3.321682 AGAGGCAGAGAGATATGCTTGTC 59.678 47.826 0.00 0.00 42.19 3.18
3591 3869 2.035704 AGGCAGAGAGATATGCTTGTCG 59.964 50.000 0.00 0.00 42.19 4.35
3653 3931 2.099921 AGCACAGTATCCGTGTCATCTC 59.900 50.000 0.00 0.00 36.71 2.75
3670 3948 6.155049 TGTCATCTCTGGTTGATATCTTGACA 59.845 38.462 3.98 0.00 0.00 3.58
3671 3949 6.700960 GTCATCTCTGGTTGATATCTTGACAG 59.299 42.308 3.98 7.45 0.00 3.51
3713 3991 7.180051 AGGGCTTTTATTTGGAACATCAATGTA 59.820 33.333 0.00 0.00 40.80 2.29
3716 3994 8.863049 GCTTTTATTTGGAACATCAATGTACTG 58.137 33.333 0.00 0.00 40.80 2.74
3717 3995 9.912634 CTTTTATTTGGAACATCAATGTACTGT 57.087 29.630 0.00 0.00 40.80 3.55
3725 4003 7.495606 TGGAACATCAATGTACTGTAGCTTATG 59.504 37.037 0.00 0.00 40.80 1.90
3749 4027 7.212976 TGTTGATGATGAAGGTAGATTAGAGC 58.787 38.462 0.00 0.00 0.00 4.09
3750 4028 6.352016 TGATGATGAAGGTAGATTAGAGCC 57.648 41.667 0.00 0.00 0.00 4.70
3754 4032 4.963318 TGAAGGTAGATTAGAGCCATGG 57.037 45.455 7.63 7.63 0.00 3.66
3758 4036 3.900601 AGGTAGATTAGAGCCATGGTGAG 59.099 47.826 14.67 0.00 0.00 3.51
3760 4038 4.833380 GGTAGATTAGAGCCATGGTGAGTA 59.167 45.833 14.67 0.00 0.00 2.59
3776 4054 3.625764 GTGAGTACAACTTGCAAGGAACA 59.374 43.478 29.18 15.54 0.00 3.18
3788 4066 2.358737 GGAACACCGGCACCTGAG 60.359 66.667 0.00 0.00 0.00 3.35
3789 4067 2.741092 GAACACCGGCACCTGAGA 59.259 61.111 0.00 0.00 0.00 3.27
3832 4113 1.596220 CGTTCCATCGATGCATGCTTG 60.596 52.381 20.25 8.62 0.00 4.01
3833 4114 1.672363 GTTCCATCGATGCATGCTTGA 59.328 47.619 20.25 13.89 0.00 3.02
3898 4179 7.360575 ACATGGACAAACGTATAAAAGACTC 57.639 36.000 0.00 0.00 0.00 3.36
3900 4181 7.117812 ACATGGACAAACGTATAAAAGACTCAG 59.882 37.037 0.00 0.00 0.00 3.35
3901 4182 6.751157 TGGACAAACGTATAAAAGACTCAGA 58.249 36.000 0.00 0.00 0.00 3.27
3902 4183 6.866770 TGGACAAACGTATAAAAGACTCAGAG 59.133 38.462 0.00 0.00 0.00 3.35
3903 4184 6.183360 GGACAAACGTATAAAAGACTCAGAGC 60.183 42.308 0.00 0.00 0.00 4.09
3904 4185 6.220930 ACAAACGTATAAAAGACTCAGAGCA 58.779 36.000 0.00 0.00 0.00 4.26
3906 4187 4.745649 ACGTATAAAAGACTCAGAGCACC 58.254 43.478 0.00 0.00 0.00 5.01
3907 4188 4.113354 CGTATAAAAGACTCAGAGCACCC 58.887 47.826 0.00 0.00 0.00 4.61
3923 4204 4.406456 AGCACCCACAGATTTGTTCAATA 58.594 39.130 0.00 0.00 34.62 1.90
3947 4228 2.295909 GCTTCAGAGTCGAGGATATGCT 59.704 50.000 0.00 0.00 0.00 3.79
3948 4229 3.611530 GCTTCAGAGTCGAGGATATGCTC 60.612 52.174 13.90 13.90 0.00 4.26
3977 4274 2.507058 AGCATAATGAGGCCTCTGACAA 59.493 45.455 32.28 13.40 30.80 3.18
3999 4296 0.891904 GTACCGTGTTGGGCCACAAT 60.892 55.000 5.23 0.29 44.64 2.71
4005 4302 1.270550 GTGTTGGGCCACAATGAGAAG 59.729 52.381 5.23 0.00 41.95 2.85
4006 4303 0.244721 GTTGGGCCACAATGAGAAGC 59.755 55.000 5.23 0.00 41.95 3.86
4038 4335 0.243636 GCCCAAACCATTCAAGACCG 59.756 55.000 0.00 0.00 0.00 4.79
4043 4340 2.825532 CAAACCATTCAAGACCGGGAAT 59.174 45.455 6.32 1.57 34.19 3.01
4054 4351 2.236395 AGACCGGGAATGGTTAACAGAG 59.764 50.000 6.32 0.00 44.01 3.35
4056 4353 2.027469 ACCGGGAATGGTTAACAGAGTC 60.027 50.000 6.32 2.05 39.99 3.36
4071 4368 1.349357 AGAGTCTGAGGCCAAAACTCC 59.651 52.381 18.44 6.50 37.63 3.85
4072 4369 1.072331 GAGTCTGAGGCCAAAACTCCA 59.928 52.381 5.01 0.00 34.06 3.86
4073 4370 1.494721 AGTCTGAGGCCAAAACTCCAA 59.505 47.619 5.01 0.00 34.06 3.53
4074 4371 1.882623 GTCTGAGGCCAAAACTCCAAG 59.117 52.381 5.01 0.00 34.06 3.61
4076 4373 2.376518 TCTGAGGCCAAAACTCCAAGAT 59.623 45.455 5.01 0.00 34.06 2.40
4077 4374 3.587061 TCTGAGGCCAAAACTCCAAGATA 59.413 43.478 5.01 0.00 34.06 1.98
4078 4375 3.944015 CTGAGGCCAAAACTCCAAGATAG 59.056 47.826 5.01 0.00 34.06 2.08
4079 4376 3.587061 TGAGGCCAAAACTCCAAGATAGA 59.413 43.478 5.01 0.00 34.06 1.98
4080 4377 4.228210 TGAGGCCAAAACTCCAAGATAGAT 59.772 41.667 5.01 0.00 34.06 1.98
4082 4379 5.685728 AGGCCAAAACTCCAAGATAGATAC 58.314 41.667 5.01 0.00 0.00 2.24
4084 4381 4.511826 GCCAAAACTCCAAGATAGATACCG 59.488 45.833 0.00 0.00 0.00 4.02
4086 4383 5.360591 CAAAACTCCAAGATAGATACCGCT 58.639 41.667 0.00 0.00 0.00 5.52
4087 4384 4.857509 AACTCCAAGATAGATACCGCTC 57.142 45.455 0.00 0.00 0.00 5.03
4088 4385 2.814919 ACTCCAAGATAGATACCGCTCG 59.185 50.000 0.00 0.00 0.00 5.03
4089 4386 2.814919 CTCCAAGATAGATACCGCTCGT 59.185 50.000 0.00 0.00 0.00 4.18
4091 4388 2.814919 CCAAGATAGATACCGCTCGTCT 59.185 50.000 0.00 0.00 0.00 4.18
4093 4390 2.702261 AGATAGATACCGCTCGTCTCC 58.298 52.381 0.00 0.00 0.00 3.71
4101 4398 1.448119 CCGCTCGTCTCCTGCTGATA 61.448 60.000 0.00 0.00 0.00 2.15
4102 4399 0.317436 CGCTCGTCTCCTGCTGATAC 60.317 60.000 0.00 0.00 0.00 2.24
4105 4402 2.210961 CTCGTCTCCTGCTGATACGTA 58.789 52.381 0.00 0.00 42.37 3.57
4108 4405 3.003378 TCGTCTCCTGCTGATACGTAATG 59.997 47.826 0.00 0.00 42.37 1.90
4114 4411 5.470368 TCCTGCTGATACGTAATGATAAGC 58.530 41.667 0.00 0.00 0.00 3.09
4115 4412 4.627467 CCTGCTGATACGTAATGATAAGCC 59.373 45.833 0.00 0.00 0.00 4.35
4122 4419 9.809096 CTGATACGTAATGATAAGCCATTAGAT 57.191 33.333 0.00 0.00 39.03 1.98
4125 4422 7.891183 ACGTAATGATAAGCCATTAGATCAC 57.109 36.000 0.00 0.00 39.03 3.06
4135 4432 5.431765 AGCCATTAGATCACTAACCAGTTG 58.568 41.667 0.00 0.00 40.71 3.16
4137 4434 5.648092 GCCATTAGATCACTAACCAGTTGTT 59.352 40.000 0.00 0.00 40.71 2.83
4139 4436 7.335924 GCCATTAGATCACTAACCAGTTGTTAA 59.664 37.037 0.00 0.00 40.71 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.266055 CTTGTGTCCTCGGGCTCC 59.734 66.667 0.00 0.00 0.00 4.70
19 20 1.079750 GACTTGTGTCCTCGGGCTC 60.080 63.158 0.00 0.00 37.24 4.70
20 21 3.060866 GACTTGTGTCCTCGGGCT 58.939 61.111 0.00 0.00 37.24 5.19
28 29 0.387929 TCTCGTGGTGGACTTGTGTC 59.612 55.000 0.00 0.00 42.22 3.67
29 30 0.828022 TTCTCGTGGTGGACTTGTGT 59.172 50.000 0.00 0.00 0.00 3.72
30 31 1.800586 CATTCTCGTGGTGGACTTGTG 59.199 52.381 0.00 0.00 0.00 3.33
31 32 1.878102 GCATTCTCGTGGTGGACTTGT 60.878 52.381 0.00 0.00 0.00 3.16
32 33 0.798776 GCATTCTCGTGGTGGACTTG 59.201 55.000 0.00 0.00 0.00 3.16
33 34 0.321653 GGCATTCTCGTGGTGGACTT 60.322 55.000 0.00 0.00 0.00 3.01
34 35 1.296715 GGCATTCTCGTGGTGGACT 59.703 57.895 0.00 0.00 0.00 3.85
35 36 2.100631 CGGCATTCTCGTGGTGGAC 61.101 63.158 0.00 0.00 0.00 4.02
36 37 2.264480 CGGCATTCTCGTGGTGGA 59.736 61.111 0.00 0.00 0.00 4.02
37 38 3.499737 GCGGCATTCTCGTGGTGG 61.500 66.667 0.00 0.00 0.00 4.61
38 39 3.499737 GGCGGCATTCTCGTGGTG 61.500 66.667 3.07 0.00 0.00 4.17
56 57 4.849310 TAAGGATGGTGCGGCGGC 62.849 66.667 9.78 9.68 40.52 6.53
57 58 2.869503 AAGTAAGGATGGTGCGGCGG 62.870 60.000 9.78 0.00 0.00 6.13
58 59 1.429148 GAAGTAAGGATGGTGCGGCG 61.429 60.000 0.51 0.51 0.00 6.46
59 60 0.392461 TGAAGTAAGGATGGTGCGGC 60.392 55.000 0.00 0.00 0.00 6.53
60 61 1.737793 GTTGAAGTAAGGATGGTGCGG 59.262 52.381 0.00 0.00 0.00 5.69
61 62 2.416547 CTGTTGAAGTAAGGATGGTGCG 59.583 50.000 0.00 0.00 0.00 5.34
62 63 3.412386 ACTGTTGAAGTAAGGATGGTGC 58.588 45.455 0.00 0.00 37.36 5.01
63 64 4.692625 CAGACTGTTGAAGTAAGGATGGTG 59.307 45.833 0.00 0.00 40.07 4.17
64 65 4.263068 CCAGACTGTTGAAGTAAGGATGGT 60.263 45.833 0.93 0.00 40.07 3.55
65 66 4.256920 CCAGACTGTTGAAGTAAGGATGG 58.743 47.826 0.93 0.00 40.07 3.51
66 67 4.899502 ACCAGACTGTTGAAGTAAGGATG 58.100 43.478 0.93 0.00 40.07 3.51
67 68 5.568620 AACCAGACTGTTGAAGTAAGGAT 57.431 39.130 0.93 0.00 40.07 3.24
68 69 5.365619 GAAACCAGACTGTTGAAGTAAGGA 58.634 41.667 0.93 0.00 40.07 3.36
69 70 4.515567 GGAAACCAGACTGTTGAAGTAAGG 59.484 45.833 0.93 0.00 40.07 2.69
70 71 5.123227 TGGAAACCAGACTGTTGAAGTAAG 58.877 41.667 0.93 0.00 40.07 2.34
71 72 5.105567 TGGAAACCAGACTGTTGAAGTAA 57.894 39.130 0.93 0.00 40.07 2.24
72 73 4.764050 TGGAAACCAGACTGTTGAAGTA 57.236 40.909 0.93 0.00 40.07 2.24
73 74 3.644966 TGGAAACCAGACTGTTGAAGT 57.355 42.857 0.93 0.00 43.85 3.01
74 75 4.981806 TTTGGAAACCAGACTGTTGAAG 57.018 40.909 0.93 0.00 33.81 3.02
75 76 4.340950 GGATTTGGAAACCAGACTGTTGAA 59.659 41.667 0.93 0.00 33.81 2.69
76 77 3.888930 GGATTTGGAAACCAGACTGTTGA 59.111 43.478 0.93 0.00 33.81 3.18
77 78 3.636300 TGGATTTGGAAACCAGACTGTTG 59.364 43.478 0.93 0.00 33.81 3.33
78 79 3.636764 GTGGATTTGGAAACCAGACTGTT 59.363 43.478 0.93 0.00 33.81 3.16
79 80 3.222603 GTGGATTTGGAAACCAGACTGT 58.777 45.455 0.93 0.00 33.81 3.55
80 81 2.558359 GGTGGATTTGGAAACCAGACTG 59.442 50.000 0.00 0.00 33.81 3.51
81 82 2.490902 GGGTGGATTTGGAAACCAGACT 60.491 50.000 0.00 0.00 33.81 3.24
82 83 1.893137 GGGTGGATTTGGAAACCAGAC 59.107 52.381 0.00 0.00 33.81 3.51
83 84 1.203125 GGGGTGGATTTGGAAACCAGA 60.203 52.381 0.00 0.00 33.81 3.86
84 85 1.266178 GGGGTGGATTTGGAAACCAG 58.734 55.000 0.00 0.00 33.81 4.00
85 86 0.563173 TGGGGTGGATTTGGAAACCA 59.437 50.000 0.00 0.00 34.18 3.67
86 87 1.723288 TTGGGGTGGATTTGGAAACC 58.277 50.000 0.00 0.00 0.00 3.27
87 88 3.738982 CTTTTGGGGTGGATTTGGAAAC 58.261 45.455 0.00 0.00 0.00 2.78
88 89 2.105649 GCTTTTGGGGTGGATTTGGAAA 59.894 45.455 0.00 0.00 0.00 3.13
89 90 1.696884 GCTTTTGGGGTGGATTTGGAA 59.303 47.619 0.00 0.00 0.00 3.53
90 91 1.347062 GCTTTTGGGGTGGATTTGGA 58.653 50.000 0.00 0.00 0.00 3.53
91 92 0.037419 CGCTTTTGGGGTGGATTTGG 60.037 55.000 0.00 0.00 0.00 3.28
92 93 0.037419 CCGCTTTTGGGGTGGATTTG 60.037 55.000 0.00 0.00 46.26 2.32
93 94 2.361189 CCGCTTTTGGGGTGGATTT 58.639 52.632 0.00 0.00 46.26 2.17
94 95 4.111967 CCGCTTTTGGGGTGGATT 57.888 55.556 0.00 0.00 46.26 3.01
109 110 1.917273 TTTTCTAACGAGGCGATCCG 58.083 50.000 0.00 0.00 37.47 4.18
110 111 3.518590 TCTTTTTCTAACGAGGCGATCC 58.481 45.455 0.00 0.00 0.00 3.36
111 112 5.044558 AGATCTTTTTCTAACGAGGCGATC 58.955 41.667 0.00 0.00 0.00 3.69
112 113 4.806247 CAGATCTTTTTCTAACGAGGCGAT 59.194 41.667 0.00 0.00 0.00 4.58
113 114 4.082408 TCAGATCTTTTTCTAACGAGGCGA 60.082 41.667 0.00 0.00 0.00 5.54
114 115 4.174009 TCAGATCTTTTTCTAACGAGGCG 58.826 43.478 0.00 0.00 0.00 5.52
115 116 5.869888 TCTTCAGATCTTTTTCTAACGAGGC 59.130 40.000 0.00 0.00 0.00 4.70
116 117 8.485976 AATCTTCAGATCTTTTTCTAACGAGG 57.514 34.615 0.00 0.00 32.75 4.63
126 127 8.831550 GCCGACTAATAAATCTTCAGATCTTTT 58.168 33.333 0.00 0.00 32.75 2.27
127 128 7.169982 CGCCGACTAATAAATCTTCAGATCTTT 59.830 37.037 0.00 0.00 32.75 2.52
128 129 6.642950 CGCCGACTAATAAATCTTCAGATCTT 59.357 38.462 0.00 0.00 32.75 2.40
129 130 6.153067 CGCCGACTAATAAATCTTCAGATCT 58.847 40.000 0.00 0.00 32.75 2.75
130 131 5.164041 GCGCCGACTAATAAATCTTCAGATC 60.164 44.000 0.00 0.00 32.75 2.75
131 132 4.686554 GCGCCGACTAATAAATCTTCAGAT 59.313 41.667 0.00 0.00 36.07 2.90
132 133 4.049186 GCGCCGACTAATAAATCTTCAGA 58.951 43.478 0.00 0.00 0.00 3.27
133 134 3.802139 TGCGCCGACTAATAAATCTTCAG 59.198 43.478 4.18 0.00 0.00 3.02
134 135 3.554324 GTGCGCCGACTAATAAATCTTCA 59.446 43.478 4.18 0.00 0.00 3.02
135 136 3.059800 GGTGCGCCGACTAATAAATCTTC 60.060 47.826 4.18 0.00 0.00 2.87
136 137 2.870411 GGTGCGCCGACTAATAAATCTT 59.130 45.455 4.18 0.00 0.00 2.40
137 138 2.159014 TGGTGCGCCGACTAATAAATCT 60.159 45.455 12.58 0.00 37.67 2.40
138 139 2.033151 GTGGTGCGCCGACTAATAAATC 60.033 50.000 12.58 0.00 37.67 2.17
139 140 1.937899 GTGGTGCGCCGACTAATAAAT 59.062 47.619 12.58 0.00 37.67 1.40
140 141 1.361793 GTGGTGCGCCGACTAATAAA 58.638 50.000 12.58 0.00 37.67 1.40
141 142 0.460635 GGTGGTGCGCCGACTAATAA 60.461 55.000 12.58 0.00 37.67 1.40
142 143 1.142314 GGTGGTGCGCCGACTAATA 59.858 57.895 12.58 0.00 37.67 0.98
143 144 2.125269 GGTGGTGCGCCGACTAAT 60.125 61.111 12.58 0.00 37.67 1.73
152 153 3.803082 CATGGCTTCGGTGGTGCG 61.803 66.667 0.00 0.00 0.00 5.34
153 154 2.359850 TCATGGCTTCGGTGGTGC 60.360 61.111 0.00 0.00 0.00 5.01
154 155 0.249120 TAGTCATGGCTTCGGTGGTG 59.751 55.000 4.49 0.00 0.00 4.17
155 156 1.134401 CATAGTCATGGCTTCGGTGGT 60.134 52.381 4.49 0.00 0.00 4.16
156 157 1.138859 TCATAGTCATGGCTTCGGTGG 59.861 52.381 4.49 0.00 32.61 4.61
157 158 2.477825 CTCATAGTCATGGCTTCGGTG 58.522 52.381 4.49 0.08 32.61 4.94
158 159 1.202580 GCTCATAGTCATGGCTTCGGT 60.203 52.381 4.49 0.00 32.61 4.69
159 160 1.202568 TGCTCATAGTCATGGCTTCGG 60.203 52.381 4.49 0.00 32.62 4.30
160 161 2.229675 TGCTCATAGTCATGGCTTCG 57.770 50.000 4.49 0.00 32.62 3.79
161 162 2.615912 GGTTGCTCATAGTCATGGCTTC 59.384 50.000 4.49 0.00 32.62 3.86
162 163 2.648059 GGTTGCTCATAGTCATGGCTT 58.352 47.619 4.49 0.00 32.62 4.35
163 164 1.133976 GGGTTGCTCATAGTCATGGCT 60.134 52.381 4.63 4.63 32.62 4.75
164 165 1.312815 GGGTTGCTCATAGTCATGGC 58.687 55.000 0.00 0.00 32.61 4.40
165 166 2.715749 TGGGTTGCTCATAGTCATGG 57.284 50.000 0.00 0.00 32.61 3.66
166 167 5.450965 GGATTTTGGGTTGCTCATAGTCATG 60.451 44.000 0.00 0.00 0.00 3.07
167 168 4.646492 GGATTTTGGGTTGCTCATAGTCAT 59.354 41.667 0.00 0.00 0.00 3.06
168 169 4.016444 GGATTTTGGGTTGCTCATAGTCA 58.984 43.478 0.00 0.00 0.00 3.41
169 170 4.273318 AGGATTTTGGGTTGCTCATAGTC 58.727 43.478 0.00 0.00 0.00 2.59
170 171 4.322057 AGGATTTTGGGTTGCTCATAGT 57.678 40.909 0.00 0.00 0.00 2.12
171 172 5.300286 CCTTAGGATTTTGGGTTGCTCATAG 59.700 44.000 0.00 0.00 0.00 2.23
172 173 5.200483 CCTTAGGATTTTGGGTTGCTCATA 58.800 41.667 0.00 0.00 0.00 2.15
173 174 4.026052 CCTTAGGATTTTGGGTTGCTCAT 58.974 43.478 0.00 0.00 0.00 2.90
174 175 3.430453 CCTTAGGATTTTGGGTTGCTCA 58.570 45.455 0.00 0.00 0.00 4.26
175 176 2.166459 GCCTTAGGATTTTGGGTTGCTC 59.834 50.000 0.69 0.00 0.00 4.26
176 177 2.179427 GCCTTAGGATTTTGGGTTGCT 58.821 47.619 0.69 0.00 0.00 3.91
177 178 1.207089 GGCCTTAGGATTTTGGGTTGC 59.793 52.381 0.69 0.00 0.00 4.17
178 179 2.820178 AGGCCTTAGGATTTTGGGTTG 58.180 47.619 0.00 0.00 0.00 3.77
179 180 3.560357 AAGGCCTTAGGATTTTGGGTT 57.440 42.857 18.87 0.00 0.00 4.11
180 181 4.899898 ATAAGGCCTTAGGATTTTGGGT 57.100 40.909 28.35 6.73 0.00 4.51
181 182 5.701224 TGTATAAGGCCTTAGGATTTTGGG 58.299 41.667 28.35 0.00 0.00 4.12
182 183 7.255942 CCATTGTATAAGGCCTTAGGATTTTGG 60.256 40.741 28.35 23.44 0.00 3.28
183 184 7.505585 TCCATTGTATAAGGCCTTAGGATTTTG 59.494 37.037 28.35 19.58 0.00 2.44
184 185 7.591821 TCCATTGTATAAGGCCTTAGGATTTT 58.408 34.615 28.35 14.34 0.00 1.82
185 186 7.161715 TCCATTGTATAAGGCCTTAGGATTT 57.838 36.000 28.35 15.03 0.00 2.17
186 187 6.780198 TCCATTGTATAAGGCCTTAGGATT 57.220 37.500 28.35 15.39 0.00 3.01
187 188 6.240292 CCTTCCATTGTATAAGGCCTTAGGAT 60.240 42.308 28.35 16.72 33.84 3.24
188 189 5.073144 CCTTCCATTGTATAAGGCCTTAGGA 59.927 44.000 28.35 23.72 33.84 2.94
189 190 5.163088 ACCTTCCATTGTATAAGGCCTTAGG 60.163 44.000 28.35 22.81 42.99 2.69
190 191 5.765182 CACCTTCCATTGTATAAGGCCTTAG 59.235 44.000 28.35 14.56 42.99 2.18
191 192 5.690865 CACCTTCCATTGTATAAGGCCTTA 58.309 41.667 27.11 27.11 42.99 2.69
192 193 4.536765 CACCTTCCATTGTATAAGGCCTT 58.463 43.478 24.18 24.18 42.99 4.35
193 194 3.688414 GCACCTTCCATTGTATAAGGCCT 60.688 47.826 0.00 0.00 42.99 5.19
194 195 2.623416 GCACCTTCCATTGTATAAGGCC 59.377 50.000 0.00 0.00 42.99 5.19
195 196 3.555966 AGCACCTTCCATTGTATAAGGC 58.444 45.455 0.00 0.00 42.99 4.35
196 197 6.591935 TCTAAGCACCTTCCATTGTATAAGG 58.408 40.000 0.00 0.00 44.45 2.69
197 198 7.500992 TCTCTAAGCACCTTCCATTGTATAAG 58.499 38.462 0.00 0.00 0.00 1.73
198 199 7.432148 TCTCTAAGCACCTTCCATTGTATAA 57.568 36.000 0.00 0.00 0.00 0.98
199 200 7.432148 TTCTCTAAGCACCTTCCATTGTATA 57.568 36.000 0.00 0.00 0.00 1.47
200 201 5.957771 TCTCTAAGCACCTTCCATTGTAT 57.042 39.130 0.00 0.00 0.00 2.29
201 202 5.755409 TTCTCTAAGCACCTTCCATTGTA 57.245 39.130 0.00 0.00 0.00 2.41
202 203 4.640771 TTCTCTAAGCACCTTCCATTGT 57.359 40.909 0.00 0.00 0.00 2.71
203 204 7.630242 TTATTTCTCTAAGCACCTTCCATTG 57.370 36.000 0.00 0.00 0.00 2.82
204 205 8.829373 ATTTATTTCTCTAAGCACCTTCCATT 57.171 30.769 0.00 0.00 0.00 3.16
205 206 7.227512 CGATTTATTTCTCTAAGCACCTTCCAT 59.772 37.037 0.00 0.00 0.00 3.41
206 207 6.538742 CGATTTATTTCTCTAAGCACCTTCCA 59.461 38.462 0.00 0.00 0.00 3.53
207 208 6.017852 CCGATTTATTTCTCTAAGCACCTTCC 60.018 42.308 0.00 0.00 0.00 3.46
208 209 6.017852 CCCGATTTATTTCTCTAAGCACCTTC 60.018 42.308 0.00 0.00 0.00 3.46
209 210 5.823045 CCCGATTTATTTCTCTAAGCACCTT 59.177 40.000 0.00 0.00 0.00 3.50
210 211 5.368989 CCCGATTTATTTCTCTAAGCACCT 58.631 41.667 0.00 0.00 0.00 4.00
211 212 4.023963 GCCCGATTTATTTCTCTAAGCACC 60.024 45.833 0.00 0.00 0.00 5.01
212 213 4.816925 AGCCCGATTTATTTCTCTAAGCAC 59.183 41.667 0.00 0.00 0.00 4.40
213 214 5.036117 AGCCCGATTTATTTCTCTAAGCA 57.964 39.130 0.00 0.00 0.00 3.91
214 215 6.378710 AAAGCCCGATTTATTTCTCTAAGC 57.621 37.500 0.00 0.00 0.00 3.09
215 216 8.214721 AGAAAAGCCCGATTTATTTCTCTAAG 57.785 34.615 0.00 0.00 35.96 2.18
216 217 8.575649 AAGAAAAGCCCGATTTATTTCTCTAA 57.424 30.769 0.00 0.00 38.89 2.10
217 218 9.675464 TTAAGAAAAGCCCGATTTATTTCTCTA 57.325 29.630 0.00 0.00 38.89 2.43
218 219 8.575649 TTAAGAAAAGCCCGATTTATTTCTCT 57.424 30.769 0.00 0.00 38.89 3.10
219 220 7.432545 GCTTAAGAAAAGCCCGATTTATTTCTC 59.567 37.037 6.67 0.00 38.89 2.87
220 221 7.093945 TGCTTAAGAAAAGCCCGATTTATTTCT 60.094 33.333 6.67 0.00 42.36 2.52
221 222 7.009265 GTGCTTAAGAAAAGCCCGATTTATTTC 59.991 37.037 6.67 0.00 42.36 2.17
222 223 6.811665 GTGCTTAAGAAAAGCCCGATTTATTT 59.188 34.615 6.67 0.00 42.36 1.40
223 224 6.330278 GTGCTTAAGAAAAGCCCGATTTATT 58.670 36.000 6.67 0.00 42.36 1.40
224 225 5.163550 GGTGCTTAAGAAAAGCCCGATTTAT 60.164 40.000 6.67 0.00 42.36 1.40
225 226 4.157105 GGTGCTTAAGAAAAGCCCGATTTA 59.843 41.667 6.67 0.00 42.36 1.40
226 227 3.056821 GGTGCTTAAGAAAAGCCCGATTT 60.057 43.478 6.67 0.00 42.36 2.17
227 228 2.492088 GGTGCTTAAGAAAAGCCCGATT 59.508 45.455 6.67 0.00 42.36 3.34
228 229 2.092323 GGTGCTTAAGAAAAGCCCGAT 58.908 47.619 6.67 0.00 42.36 4.18
229 230 1.202830 TGGTGCTTAAGAAAAGCCCGA 60.203 47.619 6.67 0.00 42.36 5.14
230 231 1.200020 CTGGTGCTTAAGAAAAGCCCG 59.800 52.381 6.67 0.00 42.36 6.13
231 232 2.029918 CACTGGTGCTTAAGAAAAGCCC 60.030 50.000 6.67 8.33 42.36 5.19
232 233 3.288809 CACTGGTGCTTAAGAAAAGCC 57.711 47.619 6.67 0.00 42.36 4.35
245 246 4.323417 TCCTGTACAAATAAGCACTGGTG 58.677 43.478 0.00 0.00 33.23 4.17
246 247 4.634012 TCCTGTACAAATAAGCACTGGT 57.366 40.909 0.00 0.00 33.23 4.00
247 248 6.480320 GTCTATCCTGTACAAATAAGCACTGG 59.520 42.308 0.00 0.00 0.00 4.00
248 249 6.199154 CGTCTATCCTGTACAAATAAGCACTG 59.801 42.308 0.00 0.00 0.00 3.66
249 250 6.273825 CGTCTATCCTGTACAAATAAGCACT 58.726 40.000 0.00 0.00 0.00 4.40
250 251 5.050972 GCGTCTATCCTGTACAAATAAGCAC 60.051 44.000 0.00 0.00 0.00 4.40
251 252 5.047847 GCGTCTATCCTGTACAAATAAGCA 58.952 41.667 0.00 0.00 0.00 3.91
252 253 5.290386 AGCGTCTATCCTGTACAAATAAGC 58.710 41.667 0.00 4.79 0.00 3.09
253 254 8.753175 GTTAAGCGTCTATCCTGTACAAATAAG 58.247 37.037 0.00 0.00 0.00 1.73
254 255 8.472413 AGTTAAGCGTCTATCCTGTACAAATAA 58.528 33.333 0.00 0.00 0.00 1.40
255 256 8.004087 AGTTAAGCGTCTATCCTGTACAAATA 57.996 34.615 0.00 0.00 0.00 1.40
256 257 6.875076 AGTTAAGCGTCTATCCTGTACAAAT 58.125 36.000 0.00 0.00 0.00 2.32
257 258 6.276832 AGTTAAGCGTCTATCCTGTACAAA 57.723 37.500 0.00 0.00 0.00 2.83
258 259 5.909621 AGTTAAGCGTCTATCCTGTACAA 57.090 39.130 0.00 0.00 0.00 2.41
259 260 7.024340 CTTAGTTAAGCGTCTATCCTGTACA 57.976 40.000 0.00 0.00 0.00 2.90
273 274 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
274 275 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
275 276 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
276 277 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
277 278 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
278 279 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
279 280 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
280 281 5.531659 CCTATTTCTACAGGAGAGACGCTTA 59.468 44.000 0.00 0.00 34.93 3.09
281 282 4.339814 CCTATTTCTACAGGAGAGACGCTT 59.660 45.833 0.00 0.00 34.93 4.68
282 283 3.886505 CCTATTTCTACAGGAGAGACGCT 59.113 47.826 0.00 0.00 34.93 5.07
283 284 3.551250 GCCTATTTCTACAGGAGAGACGC 60.551 52.174 0.00 0.00 34.93 5.19
284 285 3.632604 TGCCTATTTCTACAGGAGAGACG 59.367 47.826 0.00 0.00 34.93 4.18
285 286 4.202172 GGTGCCTATTTCTACAGGAGAGAC 60.202 50.000 0.00 0.00 34.93 3.36
286 287 3.961408 GGTGCCTATTTCTACAGGAGAGA 59.039 47.826 0.00 0.00 34.93 3.10
287 288 3.243569 CGGTGCCTATTTCTACAGGAGAG 60.244 52.174 0.00 0.00 34.93 3.20
288 289 2.693591 CGGTGCCTATTTCTACAGGAGA 59.306 50.000 0.00 0.00 33.42 3.71
289 290 2.224066 CCGGTGCCTATTTCTACAGGAG 60.224 54.545 0.00 0.00 33.42 3.69
290 291 1.760613 CCGGTGCCTATTTCTACAGGA 59.239 52.381 0.00 0.00 33.42 3.86
291 292 1.485066 ACCGGTGCCTATTTCTACAGG 59.515 52.381 6.12 0.00 35.04 4.00
292 293 2.550978 CACCGGTGCCTATTTCTACAG 58.449 52.381 24.02 0.00 0.00 2.74
293 294 2.684001 CACCGGTGCCTATTTCTACA 57.316 50.000 24.02 0.00 0.00 2.74
320 321 9.758651 ATGCTTAGAAAAATAAACCGAGTTTTT 57.241 25.926 7.22 0.00 37.01 1.94
321 322 9.406828 GATGCTTAGAAAAATAAACCGAGTTTT 57.593 29.630 7.22 0.00 37.01 2.43
322 323 8.793592 AGATGCTTAGAAAAATAAACCGAGTTT 58.206 29.630 7.11 7.11 39.24 2.66
323 324 8.336801 AGATGCTTAGAAAAATAAACCGAGTT 57.663 30.769 0.00 0.00 0.00 3.01
324 325 7.923414 AGATGCTTAGAAAAATAAACCGAGT 57.077 32.000 0.00 0.00 0.00 4.18
325 326 9.278734 GAAAGATGCTTAGAAAAATAAACCGAG 57.721 33.333 0.00 0.00 0.00 4.63
326 327 8.241367 GGAAAGATGCTTAGAAAAATAAACCGA 58.759 33.333 0.00 0.00 0.00 4.69
327 328 8.244113 AGGAAAGATGCTTAGAAAAATAAACCG 58.756 33.333 0.00 0.00 0.00 4.44
333 334 9.914131 GTGTTTAGGAAAGATGCTTAGAAAAAT 57.086 29.630 0.00 0.00 0.00 1.82
334 335 8.357402 GGTGTTTAGGAAAGATGCTTAGAAAAA 58.643 33.333 0.00 0.00 0.00 1.94
335 336 7.724061 AGGTGTTTAGGAAAGATGCTTAGAAAA 59.276 33.333 0.00 0.00 0.00 2.29
336 337 7.231467 AGGTGTTTAGGAAAGATGCTTAGAAA 58.769 34.615 0.00 0.00 0.00 2.52
337 338 6.779860 AGGTGTTTAGGAAAGATGCTTAGAA 58.220 36.000 0.00 0.00 0.00 2.10
338 339 6.374417 AGGTGTTTAGGAAAGATGCTTAGA 57.626 37.500 0.00 0.00 0.00 2.10
339 340 7.174946 TGAAAGGTGTTTAGGAAAGATGCTTAG 59.825 37.037 0.00 0.00 0.00 2.18
340 341 7.001674 TGAAAGGTGTTTAGGAAAGATGCTTA 58.998 34.615 0.00 0.00 0.00 3.09
341 342 5.833131 TGAAAGGTGTTTAGGAAAGATGCTT 59.167 36.000 0.00 0.00 0.00 3.91
342 343 5.385198 TGAAAGGTGTTTAGGAAAGATGCT 58.615 37.500 0.00 0.00 0.00 3.79
343 344 5.705609 TGAAAGGTGTTTAGGAAAGATGC 57.294 39.130 0.00 0.00 0.00 3.91
344 345 7.661040 ACAATGAAAGGTGTTTAGGAAAGATG 58.339 34.615 0.00 0.00 0.00 2.90
345 346 7.839680 ACAATGAAAGGTGTTTAGGAAAGAT 57.160 32.000 0.00 0.00 0.00 2.40
346 347 7.776030 TGTACAATGAAAGGTGTTTAGGAAAGA 59.224 33.333 0.00 0.00 0.00 2.52
347 348 7.936584 TGTACAATGAAAGGTGTTTAGGAAAG 58.063 34.615 0.00 0.00 0.00 2.62
348 349 7.883391 TGTACAATGAAAGGTGTTTAGGAAA 57.117 32.000 0.00 0.00 0.00 3.13
349 350 7.013846 CCTTGTACAATGAAAGGTGTTTAGGAA 59.986 37.037 9.13 0.00 36.50 3.36
350 351 6.488683 CCTTGTACAATGAAAGGTGTTTAGGA 59.511 38.462 9.13 0.00 36.50 2.94
351 352 6.677913 CCTTGTACAATGAAAGGTGTTTAGG 58.322 40.000 9.13 0.00 36.50 2.69
352 353 6.149633 GCCTTGTACAATGAAAGGTGTTTAG 58.850 40.000 14.26 0.00 42.13 1.85
353 354 5.010213 GGCCTTGTACAATGAAAGGTGTTTA 59.990 40.000 14.26 0.00 42.13 2.01
354 355 4.202212 GGCCTTGTACAATGAAAGGTGTTT 60.202 41.667 14.26 0.00 42.13 2.83
355 356 3.320826 GGCCTTGTACAATGAAAGGTGTT 59.679 43.478 14.26 0.00 42.13 3.32
356 357 2.890945 GGCCTTGTACAATGAAAGGTGT 59.109 45.455 14.26 0.00 42.13 4.16
357 358 3.157087 AGGCCTTGTACAATGAAAGGTG 58.843 45.455 14.26 0.00 42.13 4.00
358 359 3.525800 AGGCCTTGTACAATGAAAGGT 57.474 42.857 14.26 0.00 42.13 3.50
359 360 5.253330 TCTTAGGCCTTGTACAATGAAAGG 58.747 41.667 12.58 10.22 42.86 3.11
360 361 6.817765 TTCTTAGGCCTTGTACAATGAAAG 57.182 37.500 12.58 4.14 0.00 2.62
361 362 6.775629 AGTTTCTTAGGCCTTGTACAATGAAA 59.224 34.615 12.58 9.19 0.00 2.69
362 363 6.303839 AGTTTCTTAGGCCTTGTACAATGAA 58.696 36.000 12.58 2.58 0.00 2.57
363 364 5.876357 AGTTTCTTAGGCCTTGTACAATGA 58.124 37.500 12.58 0.00 0.00 2.57
364 365 7.681939 TTAGTTTCTTAGGCCTTGTACAATG 57.318 36.000 12.58 7.68 0.00 2.82
365 366 7.339466 CCATTAGTTTCTTAGGCCTTGTACAAT 59.661 37.037 12.58 0.00 0.00 2.71
366 367 6.657541 CCATTAGTTTCTTAGGCCTTGTACAA 59.342 38.462 12.58 8.28 0.00 2.41
367 368 6.177610 CCATTAGTTTCTTAGGCCTTGTACA 58.822 40.000 12.58 0.00 0.00 2.90
368 369 5.066117 GCCATTAGTTTCTTAGGCCTTGTAC 59.934 44.000 12.58 7.81 36.17 2.90
369 370 5.045140 AGCCATTAGTTTCTTAGGCCTTGTA 60.045 40.000 12.58 0.00 42.97 2.41
370 371 4.017126 GCCATTAGTTTCTTAGGCCTTGT 58.983 43.478 12.58 0.00 36.17 3.16
371 372 4.273318 AGCCATTAGTTTCTTAGGCCTTG 58.727 43.478 12.58 4.55 42.97 3.61
372 373 4.592997 AGCCATTAGTTTCTTAGGCCTT 57.407 40.909 12.58 0.00 42.97 4.35
373 374 5.710409 TTAGCCATTAGTTTCTTAGGCCT 57.290 39.130 11.78 11.78 42.97 5.19
374 375 6.152154 TGTTTTAGCCATTAGTTTCTTAGGCC 59.848 38.462 0.00 0.00 42.97 5.19
375 376 7.153217 TGTTTTAGCCATTAGTTTCTTAGGC 57.847 36.000 0.00 0.00 42.31 3.93
376 377 9.788960 GATTGTTTTAGCCATTAGTTTCTTAGG 57.211 33.333 0.00 0.00 0.00 2.69
377 378 9.788960 GGATTGTTTTAGCCATTAGTTTCTTAG 57.211 33.333 0.00 0.00 0.00 2.18
378 379 9.303116 TGGATTGTTTTAGCCATTAGTTTCTTA 57.697 29.630 0.00 0.00 0.00 2.10
379 380 8.088365 GTGGATTGTTTTAGCCATTAGTTTCTT 58.912 33.333 0.00 0.00 32.26 2.52
380 381 7.232534 TGTGGATTGTTTTAGCCATTAGTTTCT 59.767 33.333 0.00 0.00 32.26 2.52
381 382 7.375053 TGTGGATTGTTTTAGCCATTAGTTTC 58.625 34.615 0.00 0.00 32.26 2.78
382 383 7.296628 TGTGGATTGTTTTAGCCATTAGTTT 57.703 32.000 0.00 0.00 32.26 2.66
383 384 6.909550 TGTGGATTGTTTTAGCCATTAGTT 57.090 33.333 0.00 0.00 32.26 2.24
384 385 6.627953 GCATGTGGATTGTTTTAGCCATTAGT 60.628 38.462 0.00 0.00 32.26 2.24
385 386 5.750067 GCATGTGGATTGTTTTAGCCATTAG 59.250 40.000 0.00 0.00 32.26 1.73
386 387 5.659463 GCATGTGGATTGTTTTAGCCATTA 58.341 37.500 0.00 0.00 32.26 1.90
387 388 4.506758 GCATGTGGATTGTTTTAGCCATT 58.493 39.130 0.00 0.00 32.26 3.16
388 389 3.429272 CGCATGTGGATTGTTTTAGCCAT 60.429 43.478 0.00 0.00 32.26 4.40
389 390 2.094803 CGCATGTGGATTGTTTTAGCCA 60.095 45.455 0.00 0.00 0.00 4.75
390 391 2.094752 ACGCATGTGGATTGTTTTAGCC 60.095 45.455 11.65 0.00 0.00 3.93
391 392 2.916716 CACGCATGTGGATTGTTTTAGC 59.083 45.455 11.65 0.00 42.59 3.09
403 404 1.526887 GTTATCGGATCCACGCATGTG 59.473 52.381 13.41 4.30 46.00 3.21
404 405 1.540363 GGTTATCGGATCCACGCATGT 60.540 52.381 13.41 0.00 0.00 3.21
405 406 1.148310 GGTTATCGGATCCACGCATG 58.852 55.000 13.41 0.00 0.00 4.06
406 407 0.034896 GGGTTATCGGATCCACGCAT 59.965 55.000 13.41 0.14 0.00 4.73
407 408 1.444250 GGGTTATCGGATCCACGCA 59.556 57.895 13.41 0.00 0.00 5.24
408 409 1.301479 GGGGTTATCGGATCCACGC 60.301 63.158 13.41 10.32 0.00 5.34
409 410 1.370064 GGGGGTTATCGGATCCACG 59.630 63.158 13.41 0.00 0.00 4.94
424 425 3.706373 CCGACAGTGGTGAGGGGG 61.706 72.222 0.00 0.00 0.00 5.40
425 426 4.394712 GCCGACAGTGGTGAGGGG 62.395 72.222 0.00 0.00 0.00 4.79
426 427 4.394712 GGCCGACAGTGGTGAGGG 62.395 72.222 0.00 0.00 0.00 4.30
427 428 3.177194 TTGGCCGACAGTGGTGAGG 62.177 63.158 0.00 0.00 0.00 3.86
428 429 1.669115 CTTGGCCGACAGTGGTGAG 60.669 63.158 0.00 0.00 0.00 3.51
429 430 2.425592 CTTGGCCGACAGTGGTGA 59.574 61.111 0.00 0.00 0.00 4.02
430 431 2.669569 CCTTGGCCGACAGTGGTG 60.670 66.667 0.00 0.00 0.00 4.17
431 432 3.168528 ACCTTGGCCGACAGTGGT 61.169 61.111 0.00 0.00 34.38 4.16
432 433 2.358737 GACCTTGGCCGACAGTGG 60.359 66.667 0.00 0.00 0.00 4.00
433 434 2.738521 CGACCTTGGCCGACAGTG 60.739 66.667 0.00 0.00 0.00 3.66
434 435 3.222354 GACGACCTTGGCCGACAGT 62.222 63.158 1.78 0.00 0.00 3.55
435 436 2.432628 GACGACCTTGGCCGACAG 60.433 66.667 1.78 0.00 0.00 3.51
436 437 3.998672 GGACGACCTTGGCCGACA 61.999 66.667 1.78 0.00 0.00 4.35
443 444 2.261671 CCTCCACGGACGACCTTG 59.738 66.667 3.44 3.44 35.55 3.61
444 445 2.995574 CCCTCCACGGACGACCTT 60.996 66.667 1.72 0.00 33.16 3.50
447 448 3.450115 CTCCCCTCCACGGACGAC 61.450 72.222 0.00 0.00 33.16 4.34
496 497 4.767255 CTCACCTCCTGCCGCCAC 62.767 72.222 0.00 0.00 0.00 5.01
498 499 3.453070 GATCTCACCTCCTGCCGCC 62.453 68.421 0.00 0.00 0.00 6.13
499 500 2.107953 GATCTCACCTCCTGCCGC 59.892 66.667 0.00 0.00 0.00 6.53
500 501 2.415010 CGATCTCACCTCCTGCCG 59.585 66.667 0.00 0.00 0.00 5.69
501 502 2.107953 GCGATCTCACCTCCTGCC 59.892 66.667 0.00 0.00 0.00 4.85
502 503 1.965754 AAGGCGATCTCACCTCCTGC 61.966 60.000 0.00 0.00 34.31 4.85
503 504 0.539051 AAAGGCGATCTCACCTCCTG 59.461 55.000 0.00 0.00 34.31 3.86
504 505 0.827368 GAAAGGCGATCTCACCTCCT 59.173 55.000 0.00 0.00 34.31 3.69
505 506 0.827368 AGAAAGGCGATCTCACCTCC 59.173 55.000 0.00 0.00 34.31 4.30
506 507 2.682155 AAGAAAGGCGATCTCACCTC 57.318 50.000 0.00 0.00 34.31 3.85
507 508 2.569404 AGAAAGAAAGGCGATCTCACCT 59.431 45.455 0.00 0.00 38.14 4.00
508 509 2.675348 CAGAAAGAAAGGCGATCTCACC 59.325 50.000 0.00 0.00 0.00 4.02
509 510 2.095053 GCAGAAAGAAAGGCGATCTCAC 59.905 50.000 0.00 0.00 0.00 3.51
510 511 2.350522 GCAGAAAGAAAGGCGATCTCA 58.649 47.619 0.00 0.00 0.00 3.27
517 518 3.242870 CCATCATACGCAGAAAGAAAGGC 60.243 47.826 0.00 0.00 0.00 4.35
518 519 4.191544 TCCATCATACGCAGAAAGAAAGG 58.808 43.478 0.00 0.00 0.00 3.11
519 520 5.122239 TGTTCCATCATACGCAGAAAGAAAG 59.878 40.000 0.00 0.00 0.00 2.62
520 521 5.000591 TGTTCCATCATACGCAGAAAGAAA 58.999 37.500 0.00 0.00 0.00 2.52
521 522 4.574892 TGTTCCATCATACGCAGAAAGAA 58.425 39.130 0.00 0.00 0.00 2.52
522 523 4.200838 TGTTCCATCATACGCAGAAAGA 57.799 40.909 0.00 0.00 0.00 2.52
523 524 4.571984 TCATGTTCCATCATACGCAGAAAG 59.428 41.667 0.00 0.00 0.00 2.62
524 525 4.512484 TCATGTTCCATCATACGCAGAAA 58.488 39.130 0.00 0.00 0.00 2.52
525 526 4.122046 CTCATGTTCCATCATACGCAGAA 58.878 43.478 0.00 0.00 0.00 3.02
526 527 3.384467 TCTCATGTTCCATCATACGCAGA 59.616 43.478 0.00 0.00 0.00 4.26
527 528 3.721035 TCTCATGTTCCATCATACGCAG 58.279 45.455 0.00 0.00 0.00 5.18
528 529 3.493176 CCTCTCATGTTCCATCATACGCA 60.493 47.826 0.00 0.00 0.00 5.24
529 530 3.062763 CCTCTCATGTTCCATCATACGC 58.937 50.000 0.00 0.00 0.00 4.42
530 531 3.321968 TCCCTCTCATGTTCCATCATACG 59.678 47.826 0.00 0.00 0.00 3.06
531 532 4.262808 CCTCCCTCTCATGTTCCATCATAC 60.263 50.000 0.00 0.00 0.00 2.39
532 533 3.906218 CCTCCCTCTCATGTTCCATCATA 59.094 47.826 0.00 0.00 0.00 2.15
533 534 2.709934 CCTCCCTCTCATGTTCCATCAT 59.290 50.000 0.00 0.00 0.00 2.45
534 535 2.121948 CCTCCCTCTCATGTTCCATCA 58.878 52.381 0.00 0.00 0.00 3.07
535 536 1.419387 CCCTCCCTCTCATGTTCCATC 59.581 57.143 0.00 0.00 0.00 3.51
536 537 1.516110 CCCTCCCTCTCATGTTCCAT 58.484 55.000 0.00 0.00 0.00 3.41
537 538 0.621571 CCCCTCCCTCTCATGTTCCA 60.622 60.000 0.00 0.00 0.00 3.53
538 539 1.348775 CCCCCTCCCTCTCATGTTCC 61.349 65.000 0.00 0.00 0.00 3.62
539 540 2.225792 CCCCCTCCCTCTCATGTTC 58.774 63.158 0.00 0.00 0.00 3.18
540 541 4.508065 CCCCCTCCCTCTCATGTT 57.492 61.111 0.00 0.00 0.00 2.71
554 555 0.185175 ACAGTTCCTGTTCAACCCCC 59.815 55.000 0.00 0.00 42.59 5.40
555 556 2.943036 TACAGTTCCTGTTCAACCCC 57.057 50.000 1.74 0.00 42.59 4.95
556 557 5.990668 AGATATACAGTTCCTGTTCAACCC 58.009 41.667 1.74 0.00 42.59 4.11
557 558 6.640518 TGAGATATACAGTTCCTGTTCAACC 58.359 40.000 1.74 0.00 42.59 3.77
558 559 8.723942 AATGAGATATACAGTTCCTGTTCAAC 57.276 34.615 1.74 0.00 42.59 3.18
559 560 9.739276 AAAATGAGATATACAGTTCCTGTTCAA 57.261 29.630 1.74 0.00 42.59 2.69
562 563 9.614792 GGTAAAATGAGATATACAGTTCCTGTT 57.385 33.333 1.74 0.00 42.59 3.16
564 565 9.265901 CAGGTAAAATGAGATATACAGTTCCTG 57.734 37.037 11.78 11.78 37.52 3.86
565 566 8.993424 ACAGGTAAAATGAGATATACAGTTCCT 58.007 33.333 0.00 0.00 0.00 3.36
566 567 9.262358 GACAGGTAAAATGAGATATACAGTTCC 57.738 37.037 0.00 0.00 0.00 3.62
567 568 9.817809 TGACAGGTAAAATGAGATATACAGTTC 57.182 33.333 0.00 0.00 0.00 3.01
568 569 9.823647 CTGACAGGTAAAATGAGATATACAGTT 57.176 33.333 0.00 0.00 0.00 3.16
569 570 8.424918 CCTGACAGGTAAAATGAGATATACAGT 58.575 37.037 13.84 0.00 0.00 3.55
570 571 8.642432 TCCTGACAGGTAAAATGAGATATACAG 58.358 37.037 21.06 0.00 36.53 2.74
571 572 8.547481 TCCTGACAGGTAAAATGAGATATACA 57.453 34.615 21.06 0.00 36.53 2.29
572 573 9.646427 GATCCTGACAGGTAAAATGAGATATAC 57.354 37.037 21.06 0.00 36.53 1.47
573 574 9.379770 TGATCCTGACAGGTAAAATGAGATATA 57.620 33.333 21.06 0.00 36.53 0.86
574 575 8.153550 GTGATCCTGACAGGTAAAATGAGATAT 58.846 37.037 21.06 2.59 36.53 1.63
575 576 7.345653 AGTGATCCTGACAGGTAAAATGAGATA 59.654 37.037 21.06 0.00 36.53 1.98
576 577 6.157645 AGTGATCCTGACAGGTAAAATGAGAT 59.842 38.462 21.06 3.86 36.53 2.75
577 578 5.485353 AGTGATCCTGACAGGTAAAATGAGA 59.515 40.000 21.06 0.00 36.53 3.27
578 579 5.738909 AGTGATCCTGACAGGTAAAATGAG 58.261 41.667 21.06 0.00 36.53 2.90
579 580 5.762179 AGTGATCCTGACAGGTAAAATGA 57.238 39.130 21.06 0.00 36.53 2.57
580 581 5.520288 CGTAGTGATCCTGACAGGTAAAATG 59.480 44.000 21.06 5.49 36.53 2.32
581 582 5.187186 ACGTAGTGATCCTGACAGGTAAAAT 59.813 40.000 21.06 7.25 42.51 1.82
582 583 4.525487 ACGTAGTGATCCTGACAGGTAAAA 59.475 41.667 21.06 1.95 42.51 1.52
583 584 4.084287 ACGTAGTGATCCTGACAGGTAAA 58.916 43.478 21.06 2.35 42.51 2.01
584 585 3.693807 ACGTAGTGATCCTGACAGGTAA 58.306 45.455 21.06 3.15 42.51 2.85
585 586 3.361281 ACGTAGTGATCCTGACAGGTA 57.639 47.619 21.06 8.59 42.51 3.08
586 587 2.217510 ACGTAGTGATCCTGACAGGT 57.782 50.000 21.06 8.73 42.51 4.00
600 601 2.517391 TACTCGTGGCGTGCACGTAG 62.517 60.000 36.80 26.38 45.21 3.51
601 602 2.127634 TTACTCGTGGCGTGCACGTA 62.128 55.000 36.80 24.74 45.21 3.57
602 603 3.487764 TTACTCGTGGCGTGCACGT 62.488 57.895 36.80 19.88 45.21 4.49
603 604 2.731721 TTACTCGTGGCGTGCACG 60.732 61.111 34.01 34.01 46.21 5.34
604 605 2.851104 GTTACTCGTGGCGTGCAC 59.149 61.111 6.82 6.82 0.00 4.57
605 606 2.731721 CGTTACTCGTGGCGTGCA 60.732 61.111 0.00 0.00 34.52 4.57
615 616 1.077089 GGAAGCCGAGCACGTTACTC 61.077 60.000 2.18 5.45 37.88 2.59
616 617 1.080025 GGAAGCCGAGCACGTTACT 60.080 57.895 2.18 0.00 37.88 2.24
617 618 2.098831 GGGAAGCCGAGCACGTTAC 61.099 63.158 2.18 0.00 37.88 2.50
618 619 0.966875 TAGGGAAGCCGAGCACGTTA 60.967 55.000 2.18 0.00 37.88 3.18
619 620 1.823169 TTAGGGAAGCCGAGCACGTT 61.823 55.000 2.18 0.00 37.88 3.99
620 621 1.823169 TTTAGGGAAGCCGAGCACGT 61.823 55.000 2.18 0.00 37.88 4.49
621 622 0.462047 ATTTAGGGAAGCCGAGCACG 60.462 55.000 0.00 0.00 39.43 5.34
622 623 2.210961 GTATTTAGGGAAGCCGAGCAC 58.789 52.381 0.00 0.00 0.00 4.40
623 624 1.202486 CGTATTTAGGGAAGCCGAGCA 60.202 52.381 0.00 0.00 0.00 4.26
624 625 1.202498 ACGTATTTAGGGAAGCCGAGC 60.202 52.381 0.00 0.00 0.00 5.03
625 626 2.470821 CACGTATTTAGGGAAGCCGAG 58.529 52.381 0.00 0.00 0.00 4.63
626 627 1.137479 CCACGTATTTAGGGAAGCCGA 59.863 52.381 0.00 0.00 0.00 5.54
627 628 1.578583 CCACGTATTTAGGGAAGCCG 58.421 55.000 0.00 0.00 0.00 5.52
628 629 1.963172 CCCACGTATTTAGGGAAGCC 58.037 55.000 1.61 0.00 45.80 4.35
629 630 1.306148 GCCCACGTATTTAGGGAAGC 58.694 55.000 11.94 0.00 45.80 3.86
630 631 1.808891 CGGCCCACGTATTTAGGGAAG 60.809 57.143 11.94 1.03 45.80 3.46
631 632 0.178533 CGGCCCACGTATTTAGGGAA 59.821 55.000 11.94 0.00 45.80 3.97
660 661 2.348666 CAGCACCGTACTGTAAATGCTC 59.651 50.000 15.07 0.00 41.32 4.26
706 711 1.066573 CGCTCACCTCAAGTCCTCAAT 60.067 52.381 0.00 0.00 0.00 2.57
708 713 0.827925 ACGCTCACCTCAAGTCCTCA 60.828 55.000 0.00 0.00 0.00 3.86
907 937 3.602030 AGAGGGTGGGGAGACGGT 61.602 66.667 0.00 0.00 0.00 4.83
1156 1205 2.365293 TCAAAGGCTGGAAAGGAAAAGC 59.635 45.455 0.00 0.00 34.86 3.51
1191 1240 3.999663 CCAGCAGGAAGAAGAACAGTAAG 59.000 47.826 0.00 0.00 36.89 2.34
1337 1398 1.297409 TTCTTCCCCAACCCCAACCA 61.297 55.000 0.00 0.00 0.00 3.67
1409 1501 6.151144 GCGCATAATAAAATCCTATCAGGGTT 59.849 38.462 0.30 0.00 41.41 4.11
1532 1630 7.170998 CGCAGGGAGGTTTAATAATACAGTAAG 59.829 40.741 0.00 0.00 0.00 2.34
1533 1631 6.987992 CGCAGGGAGGTTTAATAATACAGTAA 59.012 38.462 0.00 0.00 0.00 2.24
1534 1632 6.324512 TCGCAGGGAGGTTTAATAATACAGTA 59.675 38.462 0.00 0.00 0.00 2.74
1535 1633 5.129815 TCGCAGGGAGGTTTAATAATACAGT 59.870 40.000 0.00 0.00 0.00 3.55
1536 1634 5.607477 TCGCAGGGAGGTTTAATAATACAG 58.393 41.667 0.00 0.00 0.00 2.74
1537 1635 5.617528 TCGCAGGGAGGTTTAATAATACA 57.382 39.130 0.00 0.00 0.00 2.29
1538 1636 8.665685 CATAATCGCAGGGAGGTTTAATAATAC 58.334 37.037 0.00 0.00 0.00 1.89
1557 1655 7.495934 ACAATTTAGACTTCCAGTCCATAATCG 59.504 37.037 0.09 0.00 46.18 3.34
1679 1777 6.757897 TTCCACCATAAACATGATGAGAAC 57.242 37.500 0.00 0.00 0.00 3.01
1697 1804 1.815003 CAGCACTCCCTGAATTTCCAC 59.185 52.381 0.00 0.00 34.77 4.02
1743 1850 1.541310 CGTACACCTTGAGCCTCCCA 61.541 60.000 0.00 0.00 0.00 4.37
1773 1880 2.649531 TCTTGTTGTACTTGGTGGGG 57.350 50.000 0.00 0.00 0.00 4.96
2010 2117 3.356290 GTTCCAATAAGGCCAGTGTGAT 58.644 45.455 5.01 0.00 37.29 3.06
2013 2120 1.613255 CGGTTCCAATAAGGCCAGTGT 60.613 52.381 5.01 0.00 37.29 3.55
2115 2222 3.973425 AGGAAGATTCAGGTTTCCCATG 58.027 45.455 0.00 0.00 41.00 3.66
2142 2249 7.758609 TCCATTCCATGATTCAGTGGTAATAT 58.241 34.615 0.00 3.87 36.84 1.28
2156 2349 6.262944 GTGTGCAAAGTATATCCATTCCATGA 59.737 38.462 0.00 0.00 0.00 3.07
2243 2458 8.863049 CATGCAGTTTGTTTCCAAATATCTAAC 58.137 33.333 0.00 0.00 42.26 2.34
2306 2522 2.568090 CTGAACCACGGCAATGCC 59.432 61.111 15.52 15.52 46.75 4.40
2315 2531 1.266989 CGCCTTTTCTTCCTGAACCAC 59.733 52.381 0.00 0.00 33.88 4.16
2329 2545 1.677633 CCCCCGTTCAATCGCCTTT 60.678 57.895 0.00 0.00 0.00 3.11
2342 2558 1.529244 GCAATGGAAGGATCCCCCG 60.529 63.158 8.55 0.00 45.95 5.73
2431 2647 2.551270 GGAGGAGCATATGGTGGGATA 58.449 52.381 13.10 0.00 0.00 2.59
2494 2710 4.457603 CCACGGAAATACACAAAGATGGAA 59.542 41.667 0.00 0.00 0.00 3.53
2616 2839 5.047377 TCAAGACTTTTGTGCCCCAATAATC 60.047 40.000 0.00 0.00 31.81 1.75
2678 2945 0.679505 TGAAGTTCTCCCACACCGAG 59.320 55.000 4.17 0.00 0.00 4.63
2732 2999 1.452651 CTCGTAGTAGGTGGGCGGA 60.453 63.158 0.00 0.00 0.00 5.54
2897 3164 1.154093 GACGAACACGCCGATCTCA 60.154 57.895 0.00 0.00 0.00 3.27
3050 3317 0.904865 AGATCTGGTGGAAGGCGTCA 60.905 55.000 2.23 0.00 0.00 4.35
3203 3473 2.290916 CTGAACATCATCAGCTCATGGC 59.709 50.000 0.00 0.00 40.31 4.40
3227 3497 0.248843 CCTCTCAGCTGGTTCAGACC 59.751 60.000 15.13 0.00 46.71 3.85
3229 3499 1.203112 AGTCCTCTCAGCTGGTTCAGA 60.203 52.381 15.13 8.29 32.44 3.27
3230 3500 1.067000 CAGTCCTCTCAGCTGGTTCAG 60.067 57.143 15.13 3.58 34.12 3.02
3235 3505 0.464870 CCATCAGTCCTCTCAGCTGG 59.535 60.000 15.13 4.77 0.00 4.85
3236 3506 1.482954 TCCATCAGTCCTCTCAGCTG 58.517 55.000 7.63 7.63 0.00 4.24
3237 3507 2.040939 CATCCATCAGTCCTCTCAGCT 58.959 52.381 0.00 0.00 0.00 4.24
3238 3508 2.036217 CTCATCCATCAGTCCTCTCAGC 59.964 54.545 0.00 0.00 0.00 4.26
3239 3509 3.298619 ACTCATCCATCAGTCCTCTCAG 58.701 50.000 0.00 0.00 0.00 3.35
3250 3520 1.544314 GGCTGGGCTTACTCATCCATC 60.544 57.143 0.00 0.00 0.00 3.51
3251 3521 0.475906 GGCTGGGCTTACTCATCCAT 59.524 55.000 0.00 0.00 0.00 3.41
3252 3522 0.913934 TGGCTGGGCTTACTCATCCA 60.914 55.000 0.00 0.00 0.00 3.41
3253 3523 0.255890 TTGGCTGGGCTTACTCATCC 59.744 55.000 0.00 0.00 0.00 3.51
3273 3543 0.178964 TGGCTTAGCTTGGCTTGGTT 60.179 50.000 3.59 0.00 40.44 3.67
3274 3544 0.040204 ATGGCTTAGCTTGGCTTGGT 59.960 50.000 3.59 0.00 40.44 3.67
3276 3546 3.019564 AGTAATGGCTTAGCTTGGCTTG 58.980 45.455 3.59 0.00 40.44 4.01
3277 3547 3.019564 CAGTAATGGCTTAGCTTGGCTT 58.980 45.455 3.59 5.37 40.44 4.35
3278 3548 2.025887 ACAGTAATGGCTTAGCTTGGCT 60.026 45.455 3.59 0.00 43.41 4.75
3279 3549 2.356069 GACAGTAATGGCTTAGCTTGGC 59.644 50.000 3.59 0.00 0.00 4.52
3280 3550 3.609853 TGACAGTAATGGCTTAGCTTGG 58.390 45.455 3.59 0.00 0.00 3.61
3281 3551 4.877823 TGATGACAGTAATGGCTTAGCTTG 59.122 41.667 3.59 0.00 0.00 4.01
3282 3552 5.102953 TGATGACAGTAATGGCTTAGCTT 57.897 39.130 3.59 0.00 0.00 3.74
3283 3553 4.760530 TGATGACAGTAATGGCTTAGCT 57.239 40.909 3.59 0.00 0.00 3.32
3284 3554 5.818136 TTTGATGACAGTAATGGCTTAGC 57.182 39.130 0.00 0.00 0.00 3.09
3285 3555 7.325660 ACATTTGATGACAGTAATGGCTTAG 57.674 36.000 0.00 0.00 32.02 2.18
3286 3556 8.800370 TTACATTTGATGACAGTAATGGCTTA 57.200 30.769 0.00 0.00 32.02 3.09
3420 3694 1.051812 ACCTACAACAGCAGCAGTCT 58.948 50.000 0.00 0.00 0.00 3.24
3421 3695 1.151668 CACCTACAACAGCAGCAGTC 58.848 55.000 0.00 0.00 0.00 3.51
3586 3864 0.599991 ATGCTCAGCGACAACGACAA 60.600 50.000 0.00 0.00 42.66 3.18
3587 3865 1.006220 ATGCTCAGCGACAACGACA 60.006 52.632 0.00 0.00 42.66 4.35
3588 3866 1.284982 ACATGCTCAGCGACAACGAC 61.285 55.000 0.00 0.00 42.66 4.34
3589 3867 1.006220 ACATGCTCAGCGACAACGA 60.006 52.632 0.00 0.00 42.66 3.85
3590 3868 1.010935 AGACATGCTCAGCGACAACG 61.011 55.000 0.00 0.00 42.93 4.10
3591 3869 0.441533 CAGACATGCTCAGCGACAAC 59.558 55.000 0.00 0.00 0.00 3.32
3653 3931 7.966753 CACAAAATCTGTCAAGATATCAACCAG 59.033 37.037 5.32 5.57 42.60 4.00
3713 3991 6.765036 CCTTCATCATCAACATAAGCTACAGT 59.235 38.462 0.00 0.00 0.00 3.55
3716 3994 8.144478 TCTACCTTCATCATCAACATAAGCTAC 58.856 37.037 0.00 0.00 0.00 3.58
3717 3995 8.250143 TCTACCTTCATCATCAACATAAGCTA 57.750 34.615 0.00 0.00 0.00 3.32
3725 4003 6.648725 GGCTCTAATCTACCTTCATCATCAAC 59.351 42.308 0.00 0.00 0.00 3.18
3749 4027 2.503331 TGCAAGTTGTACTCACCATGG 58.497 47.619 11.19 11.19 0.00 3.66
3750 4028 3.058016 CCTTGCAAGTTGTACTCACCATG 60.058 47.826 24.35 0.65 0.00 3.66
3754 4032 3.625764 TGTTCCTTGCAAGTTGTACTCAC 59.374 43.478 24.35 9.44 0.00 3.51
3758 4036 2.286772 CGGTGTTCCTTGCAAGTTGTAC 60.287 50.000 24.35 16.58 0.00 2.90
3760 4038 0.738389 CGGTGTTCCTTGCAAGTTGT 59.262 50.000 24.35 0.00 0.00 3.32
3776 4054 3.386237 GAGCTCTCAGGTGCCGGT 61.386 66.667 6.43 0.00 32.98 5.28
3832 4113 4.333649 TGCAGCTCATATTGCTTTACTGTC 59.666 41.667 0.00 0.00 40.87 3.51
3833 4114 4.264253 TGCAGCTCATATTGCTTTACTGT 58.736 39.130 0.00 0.00 40.87 3.55
3864 4145 3.181514 CGTTTGTCCATGTTAATCCGGAC 60.182 47.826 6.12 11.32 46.69 4.79
3868 4149 9.498307 CTTTTATACGTTTGTCCATGTTAATCC 57.502 33.333 0.00 0.00 0.00 3.01
3884 4165 4.381718 GGGTGCTCTGAGTCTTTTATACGT 60.382 45.833 6.53 0.00 0.00 3.57
3898 4179 1.901591 ACAAATCTGTGGGTGCTCTG 58.098 50.000 0.00 0.00 33.30 3.35
3900 4181 2.229792 TGAACAAATCTGTGGGTGCTC 58.770 47.619 0.00 0.00 35.37 4.26
3901 4182 2.363306 TGAACAAATCTGTGGGTGCT 57.637 45.000 0.00 0.00 35.37 4.40
3902 4183 3.665745 ATTGAACAAATCTGTGGGTGC 57.334 42.857 0.00 0.00 35.37 5.01
3903 4184 4.379394 CCGTATTGAACAAATCTGTGGGTG 60.379 45.833 0.00 0.00 35.37 4.61
3904 4185 3.756434 CCGTATTGAACAAATCTGTGGGT 59.244 43.478 0.00 0.00 35.37 4.51
3906 4187 3.440173 AGCCGTATTGAACAAATCTGTGG 59.560 43.478 0.00 0.00 35.37 4.17
3907 4188 4.685169 AGCCGTATTGAACAAATCTGTG 57.315 40.909 0.00 0.00 35.37 3.66
3923 4204 0.681564 ATCCTCGACTCTGAAGCCGT 60.682 55.000 0.00 0.00 0.00 5.68
3947 4228 0.758734 CTCATTATGCTCACCCCGGA 59.241 55.000 0.73 0.00 0.00 5.14
3948 4229 0.250467 CCTCATTATGCTCACCCCGG 60.250 60.000 0.00 0.00 0.00 5.73
3959 4256 4.686191 CTCTTGTCAGAGGCCTCATTAT 57.314 45.455 33.90 11.27 42.84 1.28
3977 4274 1.839747 TGGCCCAACACGGTACTCT 60.840 57.895 0.00 0.00 0.00 3.24
3986 4283 1.619654 CTTCTCATTGTGGCCCAACA 58.380 50.000 0.00 0.00 35.44 3.33
3999 4296 3.973516 ACACGGACGCGCTTCTCA 61.974 61.111 14.02 0.00 0.00 3.27
4038 4335 4.508662 CTCAGACTCTGTTAACCATTCCC 58.491 47.826 2.48 0.00 32.61 3.97
4043 4340 1.623811 GGCCTCAGACTCTGTTAACCA 59.376 52.381 2.48 0.00 32.61 3.67
4054 4351 1.882623 CTTGGAGTTTTGGCCTCAGAC 59.117 52.381 3.32 0.00 0.00 3.51
4056 4353 2.276732 TCTTGGAGTTTTGGCCTCAG 57.723 50.000 3.32 0.00 0.00 3.35
4071 4368 3.120130 GGAGACGAGCGGTATCTATCTTG 60.120 52.174 1.11 0.00 37.06 3.02
4072 4369 3.075884 GGAGACGAGCGGTATCTATCTT 58.924 50.000 1.11 0.00 37.06 2.40
4073 4370 2.303600 AGGAGACGAGCGGTATCTATCT 59.696 50.000 1.11 0.85 37.06 1.98
4074 4371 2.417239 CAGGAGACGAGCGGTATCTATC 59.583 54.545 1.11 0.00 37.06 2.08
4076 4373 1.880271 CAGGAGACGAGCGGTATCTA 58.120 55.000 1.11 0.00 37.06 1.98
4077 4374 1.448922 GCAGGAGACGAGCGGTATCT 61.449 60.000 0.70 0.70 37.06 1.98
4078 4375 1.008309 GCAGGAGACGAGCGGTATC 60.008 63.158 0.00 0.00 36.12 2.24
4079 4376 1.454111 AGCAGGAGACGAGCGGTAT 60.454 57.895 0.00 0.00 40.49 2.73
4080 4377 2.045242 AGCAGGAGACGAGCGGTA 60.045 61.111 0.00 0.00 40.49 4.02
4082 4379 1.448119 TATCAGCAGGAGACGAGCGG 61.448 60.000 0.00 0.00 40.49 5.52
4084 4381 3.560826 GTATCAGCAGGAGACGAGC 57.439 57.895 0.00 0.00 36.65 5.03
4088 4385 4.569761 TCATTACGTATCAGCAGGAGAC 57.430 45.455 0.00 0.00 34.36 3.36
4089 4386 6.570571 GCTTATCATTACGTATCAGCAGGAGA 60.571 42.308 0.00 0.00 0.00 3.71
4091 4388 5.470368 GCTTATCATTACGTATCAGCAGGA 58.530 41.667 0.00 0.00 0.00 3.86
4093 4390 5.230182 TGGCTTATCATTACGTATCAGCAG 58.770 41.667 0.00 0.00 0.00 4.24
4101 4398 7.671302 AGTGATCTAATGGCTTATCATTACGT 58.329 34.615 0.00 0.00 38.24 3.57
4102 4399 9.639601 TTAGTGATCTAATGGCTTATCATTACG 57.360 33.333 0.00 0.00 38.24 3.18
4105 4402 8.439971 TGGTTAGTGATCTAATGGCTTATCATT 58.560 33.333 0.00 0.00 38.25 2.57
4108 4405 7.445945 ACTGGTTAGTGATCTAATGGCTTATC 58.554 38.462 0.00 0.00 38.25 1.75
4114 4411 8.786826 TTAACAACTGGTTAGTGATCTAATGG 57.213 34.615 0.00 0.00 42.63 3.16
4122 4419 7.925043 TCTTGTTTTAACAACTGGTTAGTGA 57.075 32.000 4.02 0.00 43.45 3.41
4125 4422 6.413818 CGCTTCTTGTTTTAACAACTGGTTAG 59.586 38.462 4.02 0.00 43.45 2.34
4129 4426 4.041723 CCGCTTCTTGTTTTAACAACTGG 58.958 43.478 4.02 0.00 43.45 4.00
4135 4432 4.438336 GCTATCCCCGCTTCTTGTTTTAAC 60.438 45.833 0.00 0.00 0.00 2.01
4137 4434 3.054655 AGCTATCCCCGCTTCTTGTTTTA 60.055 43.478 0.00 0.00 32.98 1.52
4139 4436 1.282157 AGCTATCCCCGCTTCTTGTTT 59.718 47.619 0.00 0.00 32.98 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.