Multiple sequence alignment - TraesCS3B01G473100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G473100 chr3B 100.000 6159 0 0 1 6159 722364469 722358311 0.000000e+00 11374
1 TraesCS3B01G473100 chr3B 92.027 301 24 0 467 767 605273230 605272930 2.050000e-114 424
2 TraesCS3B01G473100 chr3B 96.104 77 2 1 2684 2759 548846944 548846868 2.330000e-24 124
3 TraesCS3B01G473100 chr3A 91.010 3526 217 46 2562 6018 682328956 682325462 0.000000e+00 4663
4 TraesCS3B01G473100 chr3A 91.395 1104 47 25 755 1836 682330787 682329710 0.000000e+00 1469
5 TraesCS3B01G473100 chr3A 94.475 362 20 0 1928 2289 682329681 682329320 5.390000e-155 558
6 TraesCS3B01G473100 chr3A 93.939 99 6 0 208 306 682331042 682330944 3.850000e-32 150
7 TraesCS3B01G473100 chr3D 91.884 2797 180 29 2562 5343 545917095 545914331 0.000000e+00 3864
8 TraesCS3B01G473100 chr3D 93.836 1087 43 15 758 1836 545919181 545918111 0.000000e+00 1615
9 TraesCS3B01G473100 chr3D 91.847 834 42 10 5348 6159 545914246 545913417 0.000000e+00 1140
10 TraesCS3B01G473100 chr3D 93.814 388 18 3 1906 2289 545918101 545917716 4.140000e-161 579
11 TraesCS3B01G473100 chr3D 84.650 443 50 8 1 429 545919651 545919213 5.710000e-115 425
12 TraesCS3B01G473100 chr6B 94.595 296 16 0 466 761 233671407 233671702 5.630000e-125 459
13 TraesCS3B01G473100 chr1A 93.243 296 18 2 467 761 525024883 525024589 9.480000e-118 435
14 TraesCS3B01G473100 chr4B 92.283 311 15 3 467 768 93770220 93769910 3.410000e-117 433
15 TraesCS3B01G473100 chr7B 92.929 297 20 1 467 762 686134739 686134443 1.230000e-116 431
16 TraesCS3B01G473100 chr7B 93.750 80 5 0 2675 2754 701008311 701008232 3.020000e-23 121
17 TraesCS3B01G473100 chr5B 92.642 299 20 1 472 770 45552792 45553088 4.410000e-116 429
18 TraesCS3B01G473100 chr5B 84.699 183 16 3 3543 3725 493088472 493088302 8.210000e-39 172
19 TraesCS3B01G473100 chr4A 92.258 310 11 11 463 761 703252783 703253090 1.590000e-115 427
20 TraesCS3B01G473100 chr7A 92.409 303 15 5 467 761 734933593 734933895 5.710000e-115 425
21 TraesCS3B01G473100 chr6A 90.274 329 19 10 444 761 64505362 64505036 9.550000e-113 418
22 TraesCS3B01G473100 chr2B 93.258 89 5 1 2672 2759 697141476 697141564 5.010000e-26 130
23 TraesCS3B01G473100 chr2B 93.258 89 5 1 2672 2759 697156445 697156533 5.010000e-26 130
24 TraesCS3B01G473100 chr2B 93.258 89 5 1 2672 2759 697340370 697340458 5.010000e-26 130
25 TraesCS3B01G473100 chr2B 92.135 89 6 1 2672 2759 697294142 697294230 2.330000e-24 124
26 TraesCS3B01G473100 chr2B 92.135 89 6 1 2672 2759 697377880 697377968 2.330000e-24 124
27 TraesCS3B01G473100 chr2B 94.872 78 3 1 2683 2759 53476110 53476187 3.020000e-23 121
28 TraesCS3B01G473100 chr2B 91.011 89 7 1 2672 2759 697010660 697010748 1.080000e-22 119
29 TraesCS3B01G473100 chr7D 89.362 94 10 0 3006 3099 126612822 126612915 1.080000e-22 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G473100 chr3B 722358311 722364469 6158 True 11374.0 11374 100.00000 1 6159 1 chr3B.!!$R3 6158
1 TraesCS3B01G473100 chr3A 682325462 682331042 5580 True 1710.0 4663 92.70475 208 6018 4 chr3A.!!$R1 5810
2 TraesCS3B01G473100 chr3D 545913417 545919651 6234 True 1524.6 3864 91.20620 1 6159 5 chr3D.!!$R1 6158


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 676 0.029167 GAGGCGTCTACGGTAGCTTC 59.971 60.0 10.34 2.64 40.23 3.86 F
707 749 0.035439 AGGGTGTGCGTTCATAAGGG 60.035 55.0 0.00 0.00 0.00 3.95 F
1853 1921 0.042188 CGTATTCGGCGGAATGCTTG 60.042 55.0 25.04 11.31 42.72 4.01 F
2703 3192 0.032813 AATACTCCCTCCGTCCCGAA 60.033 55.0 0.00 0.00 0.00 4.30 F
2708 3197 0.826062 TCCCTCCGTCCCGAAATAAC 59.174 55.0 0.00 0.00 0.00 1.89 F
4344 4849 0.463833 CATCAAGCCTTCCCCGGTAC 60.464 60.0 0.00 0.00 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2436 2925 0.179215 GCAAATCTTCGCACAGGTCG 60.179 55.000 0.00 0.00 0.00 4.79 R
2437 2926 0.874390 TGCAAATCTTCGCACAGGTC 59.126 50.000 0.00 0.00 31.95 3.85 R
3728 4227 0.321653 ATGGACCAACCTCTGTTCGC 60.322 55.000 0.00 0.00 39.86 4.70 R
4344 4849 0.450184 CCATTTCTTTACACGGCGGG 59.550 55.000 8.04 8.04 0.00 6.13 R
4435 4940 2.880268 TGTTGAAGCTTCTGGTGACATG 59.120 45.455 26.09 0.00 41.51 3.21 R
5538 6151 0.535102 CAACTGGTTTCGTGGAGCCT 60.535 55.000 0.00 0.00 0.00 4.58 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.422127 CGCCGAGGAATTGGTGTAAAAT 59.578 45.455 0.00 0.00 0.00 1.82
46 47 0.241481 TAAAATTGAACCGCCACCGC 59.759 50.000 0.00 0.00 0.00 5.68
61 62 2.663188 CGCGGATCAAGCCTAGGC 60.663 66.667 27.19 27.19 42.33 3.93
69 70 0.112218 TCAAGCCTAGGCAAGCCAAA 59.888 50.000 34.70 10.39 44.88 3.28
70 71 0.968405 CAAGCCTAGGCAAGCCAAAA 59.032 50.000 34.70 0.00 44.88 2.44
76 79 3.189080 GCCTAGGCAAGCCAAAATTTTTG 59.811 43.478 29.33 13.76 41.49 2.44
102 105 1.673400 CATTCCAAACGGACACACACA 59.327 47.619 0.00 0.00 30.04 3.72
114 117 3.119673 GGACACACACAACACAATCAACA 60.120 43.478 0.00 0.00 0.00 3.33
116 119 3.178267 CACACACAACACAATCAACACC 58.822 45.455 0.00 0.00 0.00 4.16
119 122 4.081752 ACACACAACACAATCAACACCAAT 60.082 37.500 0.00 0.00 0.00 3.16
179 186 6.693545 TCCAAAATGCTTAAGTGTTAACAACG 59.306 34.615 10.51 0.00 0.00 4.10
181 188 7.221067 CCAAAATGCTTAAGTGTTAACAACGAA 59.779 33.333 10.51 3.71 0.00 3.85
224 233 9.103861 AGAACTTTATTACTCAAATAGCAGAGC 57.896 33.333 0.00 0.00 35.28 4.09
306 315 3.767673 GGAGTGACATGTACCCAACTAGA 59.232 47.826 0.00 0.00 0.00 2.43
314 323 2.555325 TGTACCCAACTAGACACGAGTG 59.445 50.000 0.00 1.13 0.00 3.51
321 330 5.929992 CCCAACTAGACACGAGTGATTTTAA 59.070 40.000 10.50 0.00 0.00 1.52
336 365 8.934023 AGTGATTTTAATTTTGTACTCCCTCA 57.066 30.769 0.00 0.00 0.00 3.86
337 366 9.362151 AGTGATTTTAATTTTGTACTCCCTCAA 57.638 29.630 0.00 0.00 0.00 3.02
394 423 5.076182 TCTTGAATACAACCCAGAATGCAA 58.924 37.500 0.00 0.00 30.55 4.08
398 427 7.658525 TGAATACAACCCAGAATGCAATAAT 57.341 32.000 0.00 0.00 31.97 1.28
464 506 7.282450 GGGGTACAATACAAAAGAAGAGTATGG 59.718 40.741 0.00 0.00 0.00 2.74
465 507 7.282450 GGGTACAATACAAAAGAAGAGTATGGG 59.718 40.741 0.00 0.00 0.00 4.00
466 508 7.282450 GGTACAATACAAAAGAAGAGTATGGGG 59.718 40.741 0.00 0.00 0.00 4.96
467 509 5.652452 ACAATACAAAAGAAGAGTATGGGGC 59.348 40.000 0.00 0.00 0.00 5.80
468 510 2.711542 ACAAAAGAAGAGTATGGGGCG 58.288 47.619 0.00 0.00 0.00 6.13
469 511 2.304761 ACAAAAGAAGAGTATGGGGCGA 59.695 45.455 0.00 0.00 0.00 5.54
470 512 3.244770 ACAAAAGAAGAGTATGGGGCGAA 60.245 43.478 0.00 0.00 0.00 4.70
471 513 2.693267 AAGAAGAGTATGGGGCGAAC 57.307 50.000 0.00 0.00 0.00 3.95
472 514 0.831307 AGAAGAGTATGGGGCGAACC 59.169 55.000 0.00 0.00 39.11 3.62
473 515 0.539986 GAAGAGTATGGGGCGAACCA 59.460 55.000 0.78 0.78 46.24 3.67
474 516 0.988832 AAGAGTATGGGGCGAACCAA 59.011 50.000 2.51 0.00 45.13 3.67
475 517 0.252197 AGAGTATGGGGCGAACCAAC 59.748 55.000 2.51 3.60 45.13 3.77
476 518 0.035820 GAGTATGGGGCGAACCAACA 60.036 55.000 2.51 0.00 45.13 3.33
477 519 0.623723 AGTATGGGGCGAACCAACAT 59.376 50.000 2.51 0.00 45.13 2.71
478 520 0.738389 GTATGGGGCGAACCAACATG 59.262 55.000 2.51 0.00 45.13 3.21
479 521 0.329931 TATGGGGCGAACCAACATGT 59.670 50.000 2.51 0.00 45.13 3.21
480 522 1.250154 ATGGGGCGAACCAACATGTG 61.250 55.000 0.00 0.00 45.13 3.21
495 537 3.955471 ACATGTGGTTGAGATGGTTAGG 58.045 45.455 0.00 0.00 29.21 2.69
496 538 3.330701 ACATGTGGTTGAGATGGTTAGGT 59.669 43.478 0.00 0.00 29.21 3.08
497 539 3.417069 TGTGGTTGAGATGGTTAGGTG 57.583 47.619 0.00 0.00 0.00 4.00
498 540 2.039746 TGTGGTTGAGATGGTTAGGTGG 59.960 50.000 0.00 0.00 0.00 4.61
499 541 2.304761 GTGGTTGAGATGGTTAGGTGGA 59.695 50.000 0.00 0.00 0.00 4.02
500 542 2.304761 TGGTTGAGATGGTTAGGTGGAC 59.695 50.000 0.00 0.00 0.00 4.02
501 543 2.304761 GGTTGAGATGGTTAGGTGGACA 59.695 50.000 0.00 0.00 0.00 4.02
502 544 3.600388 GTTGAGATGGTTAGGTGGACAG 58.400 50.000 0.00 0.00 0.00 3.51
503 545 2.902608 TGAGATGGTTAGGTGGACAGT 58.097 47.619 0.00 0.00 0.00 3.55
504 546 2.567169 TGAGATGGTTAGGTGGACAGTG 59.433 50.000 0.00 0.00 0.00 3.66
505 547 1.909302 AGATGGTTAGGTGGACAGTGG 59.091 52.381 0.00 0.00 0.00 4.00
506 548 1.628846 GATGGTTAGGTGGACAGTGGT 59.371 52.381 0.00 0.00 0.00 4.16
507 549 2.402182 TGGTTAGGTGGACAGTGGTA 57.598 50.000 0.00 0.00 0.00 3.25
508 550 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
509 551 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
510 552 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
511 553 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
512 554 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
513 555 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
522 564 1.887797 TGGTATCCCCAACCTACCAG 58.112 55.000 0.00 0.00 41.50 4.00
523 565 1.137697 GGTATCCCCAACCTACCAGG 58.862 60.000 0.00 0.00 42.49 4.45
524 566 1.137697 GTATCCCCAACCTACCAGGG 58.862 60.000 0.00 0.00 40.58 4.45
525 567 0.726366 TATCCCCAACCTACCAGGGT 59.274 55.000 0.00 0.00 40.58 4.34
527 569 0.843343 TCCCCAACCTACCAGGGTTC 60.843 60.000 0.00 0.00 46.58 3.62
528 570 1.137594 CCCCAACCTACCAGGGTTCA 61.138 60.000 0.00 0.00 46.58 3.18
529 571 0.774908 CCCAACCTACCAGGGTTCAA 59.225 55.000 0.00 0.00 46.58 2.69
530 572 1.146152 CCCAACCTACCAGGGTTCAAA 59.854 52.381 0.00 0.00 46.58 2.69
531 573 2.225267 CCCAACCTACCAGGGTTCAAAT 60.225 50.000 0.00 0.00 46.58 2.32
532 574 3.089284 CCAACCTACCAGGGTTCAAATC 58.911 50.000 0.00 0.00 46.58 2.17
533 575 3.499563 CCAACCTACCAGGGTTCAAATCA 60.500 47.826 0.00 0.00 46.58 2.57
534 576 4.344104 CAACCTACCAGGGTTCAAATCAT 58.656 43.478 0.00 0.00 46.58 2.45
535 577 3.968265 ACCTACCAGGGTTCAAATCATG 58.032 45.455 0.00 0.00 40.58 3.07
536 578 3.290710 CCTACCAGGGTTCAAATCATGG 58.709 50.000 5.19 5.19 0.00 3.66
537 579 2.999185 ACCAGGGTTCAAATCATGGT 57.001 45.000 6.52 6.52 36.24 3.55
538 580 2.528564 ACCAGGGTTCAAATCATGGTG 58.471 47.619 11.28 0.00 39.51 4.17
539 581 1.205417 CCAGGGTTCAAATCATGGTGC 59.795 52.381 0.00 0.00 0.00 5.01
540 582 2.173519 CAGGGTTCAAATCATGGTGCT 58.826 47.619 0.00 0.00 0.00 4.40
541 583 2.165030 CAGGGTTCAAATCATGGTGCTC 59.835 50.000 0.00 0.00 0.00 4.26
542 584 1.133025 GGGTTCAAATCATGGTGCTCG 59.867 52.381 0.00 0.00 0.00 5.03
543 585 1.468054 GGTTCAAATCATGGTGCTCGC 60.468 52.381 0.00 0.00 0.00 5.03
544 586 1.199789 GTTCAAATCATGGTGCTCGCA 59.800 47.619 0.00 0.00 0.00 5.10
545 587 1.753930 TCAAATCATGGTGCTCGCAT 58.246 45.000 0.00 0.00 0.00 4.73
546 588 2.093890 TCAAATCATGGTGCTCGCATT 58.906 42.857 0.00 0.00 0.00 3.56
547 589 3.277715 TCAAATCATGGTGCTCGCATTA 58.722 40.909 0.00 0.00 0.00 1.90
548 590 3.884693 TCAAATCATGGTGCTCGCATTAT 59.115 39.130 0.00 0.00 0.00 1.28
549 591 4.338964 TCAAATCATGGTGCTCGCATTATT 59.661 37.500 0.00 0.00 0.00 1.40
550 592 4.924305 AATCATGGTGCTCGCATTATTT 57.076 36.364 0.00 0.00 0.00 1.40
551 593 3.969117 TCATGGTGCTCGCATTATTTC 57.031 42.857 0.00 0.00 0.00 2.17
552 594 3.544684 TCATGGTGCTCGCATTATTTCT 58.455 40.909 0.00 0.00 0.00 2.52
553 595 3.313249 TCATGGTGCTCGCATTATTTCTG 59.687 43.478 0.00 0.00 0.00 3.02
554 596 2.016318 TGGTGCTCGCATTATTTCTGG 58.984 47.619 0.00 0.00 0.00 3.86
555 597 2.288666 GGTGCTCGCATTATTTCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
556 598 2.880890 GGTGCTCGCATTATTTCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
557 599 3.316308 GGTGCTCGCATTATTTCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
558 600 4.202050 GGTGCTCGCATTATTTCTGGATTT 60.202 41.667 0.00 0.00 0.00 2.17
559 601 5.008613 GGTGCTCGCATTATTTCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
560 602 6.294176 GGTGCTCGCATTATTTCTGGATTTAT 60.294 38.462 0.00 0.00 0.00 1.40
561 603 7.141363 GTGCTCGCATTATTTCTGGATTTATT 58.859 34.615 0.00 0.00 0.00 1.40
562 604 7.649306 GTGCTCGCATTATTTCTGGATTTATTT 59.351 33.333 0.00 0.00 0.00 1.40
563 605 8.196771 TGCTCGCATTATTTCTGGATTTATTTT 58.803 29.630 0.00 0.00 0.00 1.82
564 606 9.677567 GCTCGCATTATTTCTGGATTTATTTTA 57.322 29.630 0.00 0.00 0.00 1.52
574 616 7.817418 TCTGGATTTATTTTAGGATTTCCGG 57.183 36.000 0.00 0.00 42.08 5.14
575 617 6.264518 TCTGGATTTATTTTAGGATTTCCGGC 59.735 38.462 0.00 0.00 42.08 6.13
576 618 5.009210 TGGATTTATTTTAGGATTTCCGGCG 59.991 40.000 0.00 0.00 42.08 6.46
577 619 5.239963 GGATTTATTTTAGGATTTCCGGCGA 59.760 40.000 9.30 0.00 42.08 5.54
578 620 6.072119 GGATTTATTTTAGGATTTCCGGCGAT 60.072 38.462 9.30 0.00 42.08 4.58
579 621 5.682943 TTATTTTAGGATTTCCGGCGATG 57.317 39.130 9.30 0.00 42.08 3.84
580 622 1.305201 TTTAGGATTTCCGGCGATGC 58.695 50.000 9.30 0.00 42.08 3.91
581 623 0.878523 TTAGGATTTCCGGCGATGCG 60.879 55.000 9.30 0.00 42.08 4.73
592 634 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
593 635 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
594 636 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
595 637 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
596 638 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
597 639 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
598 640 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
599 641 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
600 642 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
601 643 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
602 644 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
603 645 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
630 672 3.805267 ACGAGGCGTCTACGGTAG 58.195 61.111 8.91 8.91 33.69 3.18
631 673 2.327244 CGAGGCGTCTACGGTAGC 59.673 66.667 10.34 5.12 40.23 3.58
632 674 2.178890 CGAGGCGTCTACGGTAGCT 61.179 63.158 10.34 1.75 40.23 3.32
633 675 1.712977 CGAGGCGTCTACGGTAGCTT 61.713 60.000 10.34 0.00 40.23 3.74
634 676 0.029167 GAGGCGTCTACGGTAGCTTC 59.971 60.000 10.34 2.64 40.23 3.86
635 677 1.298190 GGCGTCTACGGTAGCTTCG 60.298 63.158 10.34 14.18 40.23 3.79
636 678 1.427020 GCGTCTACGGTAGCTTCGT 59.573 57.895 16.77 16.77 43.64 3.85
637 679 0.652592 GCGTCTACGGTAGCTTCGTA 59.347 55.000 17.13 17.13 41.38 3.43
638 680 1.062587 GCGTCTACGGTAGCTTCGTAA 59.937 52.381 18.18 9.95 41.62 3.18
639 681 2.476185 GCGTCTACGGTAGCTTCGTAAA 60.476 50.000 18.18 7.19 41.62 2.01
640 682 3.790123 GCGTCTACGGTAGCTTCGTAAAT 60.790 47.826 18.18 1.06 41.62 1.40
641 683 3.964970 CGTCTACGGTAGCTTCGTAAATC 59.035 47.826 18.18 12.15 41.62 2.17
642 684 4.260538 CGTCTACGGTAGCTTCGTAAATCT 60.261 45.833 18.18 0.21 41.62 2.40
643 685 5.204101 GTCTACGGTAGCTTCGTAAATCTC 58.796 45.833 18.18 7.65 41.62 2.75
644 686 4.877823 TCTACGGTAGCTTCGTAAATCTCA 59.122 41.667 18.18 2.46 41.62 3.27
645 687 4.445452 ACGGTAGCTTCGTAAATCTCAA 57.555 40.909 12.14 0.00 39.22 3.02
646 688 4.421948 ACGGTAGCTTCGTAAATCTCAAG 58.578 43.478 12.14 0.00 39.22 3.02
647 689 4.157289 ACGGTAGCTTCGTAAATCTCAAGA 59.843 41.667 12.14 0.00 39.22 3.02
648 690 5.163540 ACGGTAGCTTCGTAAATCTCAAGAT 60.164 40.000 12.14 0.00 39.22 2.40
649 691 5.174035 CGGTAGCTTCGTAAATCTCAAGATG 59.826 44.000 0.00 0.00 34.49 2.90
650 692 6.273825 GGTAGCTTCGTAAATCTCAAGATGA 58.726 40.000 0.00 0.00 34.49 2.92
651 693 6.926272 GGTAGCTTCGTAAATCTCAAGATGAT 59.074 38.462 0.00 0.00 34.49 2.45
652 694 8.082852 GGTAGCTTCGTAAATCTCAAGATGATA 58.917 37.037 0.00 0.00 34.49 2.15
653 695 9.632807 GTAGCTTCGTAAATCTCAAGATGATAT 57.367 33.333 0.00 0.00 34.49 1.63
654 696 8.531622 AGCTTCGTAAATCTCAAGATGATATG 57.468 34.615 0.00 0.00 34.49 1.78
655 697 7.117523 AGCTTCGTAAATCTCAAGATGATATGC 59.882 37.037 0.00 0.00 34.49 3.14
656 698 7.623089 GCTTCGTAAATCTCAAGATGATATGCC 60.623 40.741 0.00 0.00 34.49 4.40
657 699 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
658 700 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
659 701 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
660 702 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
661 703 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
662 704 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
663 705 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
664 706 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
665 707 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
666 708 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
667 709 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
668 710 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
669 711 1.342819 GATATGCCGGCTCAGTCTCTT 59.657 52.381 29.70 1.60 0.00 2.85
670 712 2.067365 TATGCCGGCTCAGTCTCTTA 57.933 50.000 29.70 2.45 0.00 2.10
671 713 0.749649 ATGCCGGCTCAGTCTCTTAG 59.250 55.000 29.70 0.00 0.00 2.18
672 714 0.323451 TGCCGGCTCAGTCTCTTAGA 60.323 55.000 29.70 0.00 0.00 2.10
673 715 0.383949 GCCGGCTCAGTCTCTTAGAG 59.616 60.000 22.15 2.23 0.00 2.43
674 716 1.028905 CCGGCTCAGTCTCTTAGAGG 58.971 60.000 9.58 0.00 0.00 3.69
675 717 1.683629 CCGGCTCAGTCTCTTAGAGGT 60.684 57.143 9.58 0.00 0.00 3.85
676 718 1.403679 CGGCTCAGTCTCTTAGAGGTG 59.596 57.143 9.58 7.67 0.00 4.00
677 719 1.136110 GGCTCAGTCTCTTAGAGGTGC 59.864 57.143 9.58 6.03 0.00 5.01
678 720 2.099405 GCTCAGTCTCTTAGAGGTGCT 58.901 52.381 9.58 3.11 0.00 4.40
679 721 2.099098 GCTCAGTCTCTTAGAGGTGCTC 59.901 54.545 9.58 0.26 0.00 4.26
680 722 3.351740 CTCAGTCTCTTAGAGGTGCTCA 58.648 50.000 9.58 0.00 32.06 4.26
681 723 3.953612 CTCAGTCTCTTAGAGGTGCTCAT 59.046 47.826 9.58 0.00 32.06 2.90
682 724 5.117406 TCAGTCTCTTAGAGGTGCTCATA 57.883 43.478 9.58 0.00 32.06 2.15
683 725 5.129634 TCAGTCTCTTAGAGGTGCTCATAG 58.870 45.833 9.58 0.00 32.06 2.23
684 726 4.278170 CAGTCTCTTAGAGGTGCTCATAGG 59.722 50.000 9.58 0.00 32.06 2.57
685 727 3.572255 GTCTCTTAGAGGTGCTCATAGGG 59.428 52.174 9.58 0.00 32.06 3.53
686 728 2.896685 CTCTTAGAGGTGCTCATAGGGG 59.103 54.545 0.41 0.00 32.06 4.79
687 729 2.247635 TCTTAGAGGTGCTCATAGGGGT 59.752 50.000 0.00 0.00 32.06 4.95
688 730 3.465966 TCTTAGAGGTGCTCATAGGGGTA 59.534 47.826 0.00 0.00 32.06 3.69
689 731 2.390225 AGAGGTGCTCATAGGGGTAG 57.610 55.000 0.00 0.00 32.06 3.18
690 732 1.133009 AGAGGTGCTCATAGGGGTAGG 60.133 57.143 0.00 0.00 32.06 3.18
691 733 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
692 734 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
693 735 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
694 736 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
695 737 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
696 738 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
697 739 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
698 740 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
699 741 0.619543 ATAGGGGTAGGGTGTGCGTT 60.620 55.000 0.00 0.00 0.00 4.84
700 742 1.259840 TAGGGGTAGGGTGTGCGTTC 61.260 60.000 0.00 0.00 0.00 3.95
701 743 2.745037 GGGTAGGGTGTGCGTTCA 59.255 61.111 0.00 0.00 0.00 3.18
702 744 1.298667 GGGTAGGGTGTGCGTTCAT 59.701 57.895 0.00 0.00 0.00 2.57
703 745 0.538118 GGGTAGGGTGTGCGTTCATA 59.462 55.000 0.00 0.00 0.00 2.15
704 746 1.065998 GGGTAGGGTGTGCGTTCATAA 60.066 52.381 0.00 0.00 0.00 1.90
705 747 2.277084 GGTAGGGTGTGCGTTCATAAG 58.723 52.381 0.00 0.00 0.00 1.73
706 748 2.277084 GTAGGGTGTGCGTTCATAAGG 58.723 52.381 0.00 0.00 0.00 2.69
707 749 0.035439 AGGGTGTGCGTTCATAAGGG 60.035 55.000 0.00 0.00 0.00 3.95
708 750 0.322187 GGGTGTGCGTTCATAAGGGT 60.322 55.000 0.00 0.00 0.00 4.34
709 751 0.802494 GGTGTGCGTTCATAAGGGTG 59.198 55.000 0.00 0.00 0.00 4.61
710 752 1.609580 GGTGTGCGTTCATAAGGGTGA 60.610 52.381 0.00 0.00 0.00 4.02
711 753 1.732259 GTGTGCGTTCATAAGGGTGAG 59.268 52.381 0.00 0.00 0.00 3.51
712 754 1.346395 TGTGCGTTCATAAGGGTGAGT 59.654 47.619 0.00 0.00 0.00 3.41
713 755 1.732259 GTGCGTTCATAAGGGTGAGTG 59.268 52.381 0.00 0.00 0.00 3.51
714 756 1.346395 TGCGTTCATAAGGGTGAGTGT 59.654 47.619 0.00 0.00 0.00 3.55
715 757 2.563620 TGCGTTCATAAGGGTGAGTGTA 59.436 45.455 0.00 0.00 0.00 2.90
716 758 3.196901 TGCGTTCATAAGGGTGAGTGTAT 59.803 43.478 0.00 0.00 0.00 2.29
717 759 3.555956 GCGTTCATAAGGGTGAGTGTATG 59.444 47.826 0.00 0.00 0.00 2.39
718 760 3.555956 CGTTCATAAGGGTGAGTGTATGC 59.444 47.826 0.00 0.00 0.00 3.14
719 761 3.452755 TCATAAGGGTGAGTGTATGCG 57.547 47.619 0.00 0.00 0.00 4.73
720 762 1.867233 CATAAGGGTGAGTGTATGCGC 59.133 52.381 0.00 0.00 0.00 6.09
721 763 0.179121 TAAGGGTGAGTGTATGCGCG 60.179 55.000 0.00 0.00 0.00 6.86
722 764 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
723 765 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
724 766 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
725 767 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
726 768 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
727 769 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
728 770 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
729 771 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
730 772 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
731 773 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
732 774 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
735 777 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
736 778 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
737 779 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
738 780 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
739 781 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
740 782 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
741 783 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
742 784 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
743 785 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
744 786 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
745 787 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
746 788 2.680312 ATGAGCGCTTGTGTCTGTAT 57.320 45.000 13.26 0.00 0.00 2.29
747 789 2.455674 TGAGCGCTTGTGTCTGTATT 57.544 45.000 13.26 0.00 0.00 1.89
748 790 2.068519 TGAGCGCTTGTGTCTGTATTG 58.931 47.619 13.26 0.00 0.00 1.90
749 791 2.288763 TGAGCGCTTGTGTCTGTATTGA 60.289 45.455 13.26 0.00 0.00 2.57
750 792 2.932614 GAGCGCTTGTGTCTGTATTGAT 59.067 45.455 13.26 0.00 0.00 2.57
751 793 2.674852 AGCGCTTGTGTCTGTATTGATG 59.325 45.455 2.64 0.00 0.00 3.07
752 794 2.789092 GCGCTTGTGTCTGTATTGATGC 60.789 50.000 0.00 0.00 0.00 3.91
753 795 2.674852 CGCTTGTGTCTGTATTGATGCT 59.325 45.455 0.00 0.00 0.00 3.79
754 796 3.865164 CGCTTGTGTCTGTATTGATGCTA 59.135 43.478 0.00 0.00 0.00 3.49
755 797 4.329801 CGCTTGTGTCTGTATTGATGCTAA 59.670 41.667 0.00 0.00 0.00 3.09
756 798 5.163864 CGCTTGTGTCTGTATTGATGCTAAA 60.164 40.000 0.00 0.00 0.00 1.85
757 799 6.611381 GCTTGTGTCTGTATTGATGCTAAAA 58.389 36.000 0.00 0.00 0.00 1.52
758 800 7.083858 GCTTGTGTCTGTATTGATGCTAAAAA 58.916 34.615 0.00 0.00 0.00 1.94
944 993 1.222387 CGTCGTCTCCTCCTCCTCT 59.778 63.158 0.00 0.00 0.00 3.69
1288 1345 0.263172 TCCCTGATCCTCCCTCTGTC 59.737 60.000 0.00 0.00 0.00 3.51
1328 1385 1.077212 TAGCTAACTCGTCCGGCCT 60.077 57.895 0.00 0.00 0.00 5.19
1342 1399 1.367471 GGCCTTCTTTGGTGGTTGC 59.633 57.895 0.00 0.00 0.00 4.17
1370 1429 0.188342 AAGCTTGGCCTTTTCCCTCA 59.812 50.000 3.32 0.00 0.00 3.86
1381 1440 0.323629 TTTCCCTCAGAAACGCCGAT 59.676 50.000 0.00 0.00 39.60 4.18
1430 1490 3.604582 CTTTTTGGGTGGTTTTGCTTCA 58.395 40.909 0.00 0.00 0.00 3.02
1437 1497 4.195416 GGGTGGTTTTGCTTCAATTTTGA 58.805 39.130 0.00 0.00 34.92 2.69
1441 1501 6.038050 GGTGGTTTTGCTTCAATTTTGATTCA 59.962 34.615 0.00 0.00 37.00 2.57
1450 1510 5.990745 TCAATTTTGATTCACGATTTCGC 57.009 34.783 0.00 0.00 36.00 4.70
1461 1521 0.736325 CGATTTCGCTCTTCCGTGGT 60.736 55.000 0.00 0.00 0.00 4.16
1467 1530 1.371558 GCTCTTCCGTGGTTGTCCT 59.628 57.895 0.00 0.00 34.23 3.85
1472 1535 2.981977 TTCCGTGGTTGTCCTGCGTC 62.982 60.000 0.00 0.00 33.61 5.19
1473 1536 2.029073 CGTGGTTGTCCTGCGTCT 59.971 61.111 0.00 0.00 34.23 4.18
1475 1538 1.831389 CGTGGTTGTCCTGCGTCTTG 61.831 60.000 0.00 0.00 34.23 3.02
1476 1539 0.531974 GTGGTTGTCCTGCGTCTTGA 60.532 55.000 0.00 0.00 34.23 3.02
1478 1541 0.586802 GGTTGTCCTGCGTCTTGAAC 59.413 55.000 0.00 0.00 0.00 3.18
1480 1543 0.179234 TTGTCCTGCGTCTTGAACCA 59.821 50.000 0.00 0.00 0.00 3.67
1481 1544 0.249868 TGTCCTGCGTCTTGAACCAG 60.250 55.000 0.00 0.00 0.00 4.00
1557 1624 0.249447 AAAGCCAACCTCTTTTGCGC 60.249 50.000 0.00 0.00 30.21 6.09
1711 1779 1.002366 CAAATCCCGAGCTCTGTTCG 58.998 55.000 12.85 0.00 36.11 3.95
1798 1866 1.210931 CGTAGCAACTCCGAACGGA 59.789 57.895 15.13 15.13 42.90 4.69
1803 1871 2.227194 AGCAACTCCGAACGGAAAAAT 58.773 42.857 16.56 1.00 44.66 1.82
1836 1904 4.681978 GTCAACCCGGCTGCTCGT 62.682 66.667 0.00 0.00 0.00 4.18
1838 1906 2.186903 CAACCCGGCTGCTCGTAT 59.813 61.111 0.00 0.00 0.00 3.06
1841 1909 2.658593 CCCGGCTGCTCGTATTCG 60.659 66.667 0.00 0.00 38.55 3.34
1843 1911 3.330853 CGGCTGCTCGTATTCGGC 61.331 66.667 0.00 0.00 37.69 5.54
1844 1912 3.330853 GGCTGCTCGTATTCGGCG 61.331 66.667 0.00 0.00 36.55 6.46
1845 1913 3.330853 GCTGCTCGTATTCGGCGG 61.331 66.667 7.21 8.82 40.16 6.13
1846 1914 2.411701 CTGCTCGTATTCGGCGGA 59.588 61.111 7.21 0.00 39.85 5.54
1847 1915 1.226859 CTGCTCGTATTCGGCGGAA 60.227 57.895 7.21 9.32 39.85 4.30
1848 1916 0.597637 CTGCTCGTATTCGGCGGAAT 60.598 55.000 21.40 21.40 44.81 3.01
1849 1917 0.874175 TGCTCGTATTCGGCGGAATG 60.874 55.000 25.04 12.45 42.72 2.67
1850 1918 1.853319 CTCGTATTCGGCGGAATGC 59.147 57.895 25.04 22.62 42.72 3.56
1851 1919 0.597637 CTCGTATTCGGCGGAATGCT 60.598 55.000 25.04 6.78 42.72 3.79
1852 1920 0.179094 TCGTATTCGGCGGAATGCTT 60.179 50.000 25.04 6.44 42.72 3.91
1853 1921 0.042188 CGTATTCGGCGGAATGCTTG 60.042 55.000 25.04 11.31 42.72 4.01
1854 1922 1.014352 GTATTCGGCGGAATGCTTGT 58.986 50.000 25.04 5.44 42.72 3.16
1855 1923 1.400494 GTATTCGGCGGAATGCTTGTT 59.600 47.619 25.04 4.78 42.72 2.83
1856 1924 1.745232 ATTCGGCGGAATGCTTGTTA 58.255 45.000 17.74 0.00 41.29 2.41
1857 1925 1.524848 TTCGGCGGAATGCTTGTTAA 58.475 45.000 7.21 0.00 45.43 2.01
1858 1926 1.745232 TCGGCGGAATGCTTGTTAAT 58.255 45.000 7.21 0.00 45.43 1.40
1859 1927 2.088423 TCGGCGGAATGCTTGTTAATT 58.912 42.857 7.21 0.00 45.43 1.40
1860 1928 3.271729 TCGGCGGAATGCTTGTTAATTA 58.728 40.909 7.21 0.00 45.43 1.40
1861 1929 3.064271 TCGGCGGAATGCTTGTTAATTAC 59.936 43.478 7.21 0.00 45.43 1.89
1862 1930 3.181505 CGGCGGAATGCTTGTTAATTACA 60.182 43.478 0.00 0.00 45.43 2.41
1863 1931 4.351192 GGCGGAATGCTTGTTAATTACAG 58.649 43.478 0.00 0.00 45.43 2.74
1864 1932 4.142469 GGCGGAATGCTTGTTAATTACAGT 60.142 41.667 0.00 0.00 45.43 3.55
1865 1933 5.399013 GCGGAATGCTTGTTAATTACAGTT 58.601 37.500 0.00 0.00 41.73 3.16
1866 1934 5.286082 GCGGAATGCTTGTTAATTACAGTTG 59.714 40.000 0.00 0.00 41.73 3.16
1867 1935 5.799936 CGGAATGCTTGTTAATTACAGTTGG 59.200 40.000 0.00 0.00 38.19 3.77
1868 1936 6.569610 CGGAATGCTTGTTAATTACAGTTGGT 60.570 38.462 0.00 0.00 38.19 3.67
1869 1937 7.151976 GGAATGCTTGTTAATTACAGTTGGTT 58.848 34.615 0.00 0.00 38.19 3.67
1870 1938 8.301002 GGAATGCTTGTTAATTACAGTTGGTTA 58.699 33.333 0.00 0.00 38.19 2.85
1871 1939 9.855021 GAATGCTTGTTAATTACAGTTGGTTAT 57.145 29.630 0.00 0.00 38.19 1.89
1872 1940 9.855021 AATGCTTGTTAATTACAGTTGGTTATC 57.145 29.630 0.00 0.00 38.19 1.75
1873 1941 8.397575 TGCTTGTTAATTACAGTTGGTTATCA 57.602 30.769 0.00 0.00 38.19 2.15
1874 1942 9.019656 TGCTTGTTAATTACAGTTGGTTATCAT 57.980 29.630 0.00 0.00 38.19 2.45
1875 1943 9.503427 GCTTGTTAATTACAGTTGGTTATCATC 57.497 33.333 0.00 0.00 38.19 2.92
1876 1944 9.702726 CTTGTTAATTACAGTTGGTTATCATCG 57.297 33.333 0.00 0.00 38.19 3.84
1877 1945 7.690228 TGTTAATTACAGTTGGTTATCATCGC 58.310 34.615 0.00 0.00 31.68 4.58
1878 1946 5.751243 AATTACAGTTGGTTATCATCGCC 57.249 39.130 0.00 0.00 0.00 5.54
1879 1947 1.651987 ACAGTTGGTTATCATCGCCG 58.348 50.000 0.00 0.00 0.00 6.46
1880 1948 1.066430 ACAGTTGGTTATCATCGCCGT 60.066 47.619 0.00 0.00 0.00 5.68
1881 1949 1.593006 CAGTTGGTTATCATCGCCGTC 59.407 52.381 0.00 0.00 0.00 4.79
1882 1950 1.480954 AGTTGGTTATCATCGCCGTCT 59.519 47.619 0.00 0.00 0.00 4.18
1883 1951 2.691526 AGTTGGTTATCATCGCCGTCTA 59.308 45.455 0.00 0.00 0.00 2.59
1884 1952 3.131577 AGTTGGTTATCATCGCCGTCTAA 59.868 43.478 0.00 0.00 0.00 2.10
1885 1953 3.364889 TGGTTATCATCGCCGTCTAAG 57.635 47.619 0.00 0.00 0.00 2.18
1886 1954 2.953648 TGGTTATCATCGCCGTCTAAGA 59.046 45.455 0.00 0.00 0.00 2.10
1887 1955 3.382227 TGGTTATCATCGCCGTCTAAGAA 59.618 43.478 0.00 0.00 0.00 2.52
1888 1956 3.982058 GGTTATCATCGCCGTCTAAGAAG 59.018 47.826 0.00 0.00 0.00 2.85
1889 1957 4.261489 GGTTATCATCGCCGTCTAAGAAGA 60.261 45.833 0.00 0.00 0.00 2.87
1890 1958 5.279384 GTTATCATCGCCGTCTAAGAAGAA 58.721 41.667 0.00 0.00 32.16 2.52
1891 1959 3.861276 TCATCGCCGTCTAAGAAGAAA 57.139 42.857 0.00 0.00 32.16 2.52
1892 1960 3.508762 TCATCGCCGTCTAAGAAGAAAC 58.491 45.455 0.00 0.00 32.16 2.78
1893 1961 3.057104 TCATCGCCGTCTAAGAAGAAACA 60.057 43.478 0.00 0.00 32.16 2.83
1894 1962 2.942710 TCGCCGTCTAAGAAGAAACAG 58.057 47.619 0.00 0.00 32.16 3.16
1895 1963 2.555325 TCGCCGTCTAAGAAGAAACAGA 59.445 45.455 0.00 0.00 32.16 3.41
1896 1964 2.917971 CGCCGTCTAAGAAGAAACAGAG 59.082 50.000 0.00 0.00 32.16 3.35
1897 1965 3.612004 CGCCGTCTAAGAAGAAACAGAGT 60.612 47.826 0.00 0.00 32.16 3.24
1898 1966 3.675698 GCCGTCTAAGAAGAAACAGAGTG 59.324 47.826 0.00 0.00 32.16 3.51
1899 1967 4.238514 CCGTCTAAGAAGAAACAGAGTGG 58.761 47.826 0.00 0.00 32.16 4.00
1900 1968 4.022242 CCGTCTAAGAAGAAACAGAGTGGA 60.022 45.833 0.00 0.00 32.16 4.02
1901 1969 5.509163 CCGTCTAAGAAGAAACAGAGTGGAA 60.509 44.000 0.00 0.00 32.16 3.53
1902 1970 5.631512 CGTCTAAGAAGAAACAGAGTGGAAG 59.368 44.000 0.00 0.00 32.16 3.46
1903 1971 6.515200 CGTCTAAGAAGAAACAGAGTGGAAGA 60.515 42.308 0.00 0.00 32.16 2.87
1904 1972 6.643360 GTCTAAGAAGAAACAGAGTGGAAGAC 59.357 42.308 0.00 0.00 32.16 3.01
1920 1988 5.118817 GTGGAAGACGAGTTCTATTGTGTTC 59.881 44.000 0.00 0.00 36.55 3.18
1922 1990 6.208007 TGGAAGACGAGTTCTATTGTGTTCTA 59.792 38.462 0.00 0.00 37.15 2.10
1924 1992 7.760340 GGAAGACGAGTTCTATTGTGTTCTATT 59.240 37.037 0.00 0.00 37.15 1.73
1925 1993 9.141400 GAAGACGAGTTCTATTGTGTTCTATTT 57.859 33.333 0.00 0.00 35.17 1.40
2204 2279 1.141881 CGCGCCATCACTCTACCTT 59.858 57.895 0.00 0.00 0.00 3.50
2282 2357 3.286751 GCACGCTTCACCTTGCCA 61.287 61.111 0.00 0.00 0.00 4.92
2306 2399 5.063204 CAGGTACCTTCATCACTGAAACAA 58.937 41.667 13.15 0.00 40.78 2.83
2309 2402 5.106157 GGTACCTTCATCACTGAAACAATGG 60.106 44.000 4.06 0.00 40.78 3.16
2313 2406 4.443913 TCATCACTGAAACAATGGCATG 57.556 40.909 0.00 0.00 0.00 4.06
2315 2408 2.241160 TCACTGAAACAATGGCATGCT 58.759 42.857 18.92 0.00 0.00 3.79
2321 2414 1.188863 AACAATGGCATGCTCCTTCC 58.811 50.000 18.92 0.00 0.00 3.46
2338 2431 3.704061 CCTTCCTGAAAACCTTTGTCCAA 59.296 43.478 0.00 0.00 0.00 3.53
2339 2432 4.344968 CCTTCCTGAAAACCTTTGTCCAAT 59.655 41.667 0.00 0.00 0.00 3.16
2343 2436 8.713708 TTCCTGAAAACCTTTGTCCAATAATA 57.286 30.769 0.00 0.00 0.00 0.98
2344 2437 8.713708 TCCTGAAAACCTTTGTCCAATAATAA 57.286 30.769 0.00 0.00 0.00 1.40
2345 2438 8.581578 TCCTGAAAACCTTTGTCCAATAATAAC 58.418 33.333 0.00 0.00 0.00 1.89
2346 2439 8.585018 CCTGAAAACCTTTGTCCAATAATAACT 58.415 33.333 0.00 0.00 0.00 2.24
2347 2440 9.410556 CTGAAAACCTTTGTCCAATAATAACTG 57.589 33.333 0.00 0.00 0.00 3.16
2348 2441 9.137459 TGAAAACCTTTGTCCAATAATAACTGA 57.863 29.630 0.00 0.00 0.00 3.41
2349 2442 9.974980 GAAAACCTTTGTCCAATAATAACTGAA 57.025 29.630 0.00 0.00 0.00 3.02
2361 2848 8.114290 CCAATAATAACTGAACATGTACGTGAC 58.886 37.037 21.82 14.32 0.00 3.67
2362 2849 5.756950 AATAACTGAACATGTACGTGACG 57.243 39.130 21.82 2.24 0.00 4.35
2368 2855 1.990799 ACATGTACGTGACGTGATGG 58.009 50.000 25.48 15.01 46.53 3.51
2372 2859 1.068816 TGTACGTGACGTGATGGTCTG 60.069 52.381 22.16 0.00 41.39 3.51
2392 2879 5.631512 GTCTGCATTTACGTTGGCATAAAAA 59.368 36.000 0.00 0.00 35.45 1.94
2394 2881 5.289595 TGCATTTACGTTGGCATAAAAACA 58.710 33.333 0.00 0.00 0.00 2.83
2395 2882 5.928839 TGCATTTACGTTGGCATAAAAACAT 59.071 32.000 0.00 0.00 0.00 2.71
2396 2883 6.128715 TGCATTTACGTTGGCATAAAAACATG 60.129 34.615 0.00 0.00 0.00 3.21
2398 2885 7.570324 GCATTTACGTTGGCATAAAAACATGTT 60.570 33.333 4.92 4.92 0.00 2.71
2399 2886 6.994868 TTACGTTGGCATAAAAACATGTTC 57.005 33.333 12.39 0.00 0.00 3.18
2400 2887 4.303282 ACGTTGGCATAAAAACATGTTCC 58.697 39.130 12.39 8.14 0.00 3.62
2406 2895 7.296628 TGGCATAAAAACATGTTCCTTAAGT 57.703 32.000 12.39 0.00 0.00 2.24
2436 2925 9.988815 ATGGACTATGAAACTATAATCACAGAC 57.011 33.333 0.00 0.00 0.00 3.51
2437 2926 8.135529 TGGACTATGAAACTATAATCACAGACG 58.864 37.037 0.00 0.00 0.00 4.18
2438 2927 8.350722 GGACTATGAAACTATAATCACAGACGA 58.649 37.037 0.00 0.00 0.00 4.20
2439 2928 9.171701 GACTATGAAACTATAATCACAGACGAC 57.828 37.037 0.00 0.00 0.00 4.34
2440 2929 8.136165 ACTATGAAACTATAATCACAGACGACC 58.864 37.037 0.00 0.00 0.00 4.79
2441 2930 6.525578 TGAAACTATAATCACAGACGACCT 57.474 37.500 0.00 0.00 0.00 3.85
2449 2938 3.848142 CAGACGACCTGTGCGAAG 58.152 61.111 0.00 0.00 38.10 3.79
2452 2941 0.603569 AGACGACCTGTGCGAAGATT 59.396 50.000 0.00 0.00 0.00 2.40
2453 2942 1.000955 AGACGACCTGTGCGAAGATTT 59.999 47.619 0.00 0.00 0.00 2.17
2454 2943 1.126846 GACGACCTGTGCGAAGATTTG 59.873 52.381 0.00 0.00 0.00 2.32
2455 2944 0.179215 CGACCTGTGCGAAGATTTGC 60.179 55.000 0.00 0.00 38.09 3.68
2456 2945 0.874390 GACCTGTGCGAAGATTTGCA 59.126 50.000 3.31 3.31 44.93 4.08
2462 2951 2.925578 TGCGAAGATTTGCATCCAAG 57.074 45.000 3.31 0.00 42.41 3.61
2463 2952 2.435422 TGCGAAGATTTGCATCCAAGA 58.565 42.857 3.31 0.00 42.41 3.02
2464 2953 3.018856 TGCGAAGATTTGCATCCAAGAT 58.981 40.909 3.31 0.00 42.41 2.40
2465 2954 3.444742 TGCGAAGATTTGCATCCAAGATT 59.555 39.130 3.31 0.00 42.41 2.40
2466 2955 3.795101 GCGAAGATTTGCATCCAAGATTG 59.205 43.478 0.00 0.00 37.52 2.67
2467 2956 4.676196 GCGAAGATTTGCATCCAAGATTGT 60.676 41.667 0.00 0.00 37.52 2.71
2468 2957 5.404946 CGAAGATTTGCATCCAAGATTGTT 58.595 37.500 0.00 0.00 31.52 2.83
2469 2958 6.554419 CGAAGATTTGCATCCAAGATTGTTA 58.446 36.000 0.00 0.00 31.52 2.41
2470 2959 7.198390 CGAAGATTTGCATCCAAGATTGTTAT 58.802 34.615 0.00 0.00 31.52 1.89
2471 2960 8.344831 CGAAGATTTGCATCCAAGATTGTTATA 58.655 33.333 0.00 0.00 31.52 0.98
2472 2961 9.455847 GAAGATTTGCATCCAAGATTGTTATAC 57.544 33.333 0.00 0.00 31.52 1.47
2473 2962 8.757982 AGATTTGCATCCAAGATTGTTATACT 57.242 30.769 0.00 0.00 31.52 2.12
2474 2963 9.193806 AGATTTGCATCCAAGATTGTTATACTT 57.806 29.630 0.00 0.00 31.52 2.24
2475 2964 9.241317 GATTTGCATCCAAGATTGTTATACTTG 57.759 33.333 0.00 0.00 40.12 3.16
2476 2965 7.701539 TTGCATCCAAGATTGTTATACTTGT 57.298 32.000 0.00 0.00 39.19 3.16
2477 2966 8.800370 TTGCATCCAAGATTGTTATACTTGTA 57.200 30.769 0.00 0.00 39.19 2.41
2478 2967 8.208718 TGCATCCAAGATTGTTATACTTGTAC 57.791 34.615 0.00 0.00 39.19 2.90
2479 2968 7.011016 TGCATCCAAGATTGTTATACTTGTACG 59.989 37.037 0.00 0.00 39.19 3.67
2480 2969 7.011109 GCATCCAAGATTGTTATACTTGTACGT 59.989 37.037 0.00 0.00 39.19 3.57
2481 2970 7.821595 TCCAAGATTGTTATACTTGTACGTG 57.178 36.000 0.00 0.00 39.19 4.49
2482 2971 7.380536 TCCAAGATTGTTATACTTGTACGTGT 58.619 34.615 0.00 0.00 39.19 4.49
2483 2972 7.874016 TCCAAGATTGTTATACTTGTACGTGTT 59.126 33.333 0.00 0.00 39.19 3.32
2484 2973 7.955324 CCAAGATTGTTATACTTGTACGTGTTG 59.045 37.037 0.00 0.00 39.19 3.33
2485 2974 8.705134 CAAGATTGTTATACTTGTACGTGTTGA 58.295 33.333 0.00 0.00 37.03 3.18
2486 2975 8.821147 AGATTGTTATACTTGTACGTGTTGAA 57.179 30.769 0.00 0.00 0.00 2.69
2487 2976 8.706035 AGATTGTTATACTTGTACGTGTTGAAC 58.294 33.333 0.00 0.00 0.00 3.18
2488 2977 6.768029 TGTTATACTTGTACGTGTTGAACC 57.232 37.500 0.00 0.00 0.00 3.62
2489 2978 6.279123 TGTTATACTTGTACGTGTTGAACCA 58.721 36.000 0.00 0.00 0.00 3.67
2490 2979 6.930164 TGTTATACTTGTACGTGTTGAACCAT 59.070 34.615 0.00 0.00 0.00 3.55
2491 2980 5.856126 ATACTTGTACGTGTTGAACCATG 57.144 39.130 0.00 0.00 0.00 3.66
2492 2981 3.799366 ACTTGTACGTGTTGAACCATGA 58.201 40.909 0.00 0.00 0.00 3.07
2505 2994 7.222031 GTGTTGAACCATGAAACTAAACCTTTC 59.778 37.037 0.00 0.00 0.00 2.62
2513 3002 1.232621 ACTAAACCTTTCGGCGCCAC 61.233 55.000 28.98 0.00 0.00 5.01
2519 3008 3.011760 CTTTCGGCGCCACTTCGAC 62.012 63.158 28.98 0.00 32.39 4.20
2527 3016 0.732880 CGCCACTTCGACGAGATTGT 60.733 55.000 0.00 0.00 0.00 2.71
2552 3041 7.401955 TTTTTCATGGCCTTTCAAATTGTTT 57.598 28.000 3.32 0.00 0.00 2.83
2553 3042 6.374565 TTTCATGGCCTTTCAAATTGTTTG 57.625 33.333 3.32 0.00 41.96 2.93
2554 3043 4.387598 TCATGGCCTTTCAAATTGTTTGG 58.612 39.130 3.32 0.00 40.98 3.28
2555 3044 3.922171 TGGCCTTTCAAATTGTTTGGT 57.078 38.095 3.32 0.00 40.98 3.67
2556 3045 5.070981 TCATGGCCTTTCAAATTGTTTGGTA 59.929 36.000 3.32 0.00 40.98 3.25
2557 3046 5.559148 TGGCCTTTCAAATTGTTTGGTAT 57.441 34.783 3.32 0.00 40.98 2.73
2558 3047 6.672266 TGGCCTTTCAAATTGTTTGGTATA 57.328 33.333 3.32 0.00 40.98 1.47
2559 3048 7.251321 TGGCCTTTCAAATTGTTTGGTATAT 57.749 32.000 3.32 0.00 40.98 0.86
2560 3049 7.684529 TGGCCTTTCAAATTGTTTGGTATATT 58.315 30.769 3.32 0.00 40.98 1.28
2583 3072 8.736097 ATTTTTCTAGAAAGGGTTGGGTTATT 57.264 30.769 17.05 0.00 0.00 1.40
2584 3073 9.831682 ATTTTTCTAGAAAGGGTTGGGTTATTA 57.168 29.630 17.05 0.00 0.00 0.98
2668 3157 2.609459 GGCGAGTTGACATATTCCTGTG 59.391 50.000 0.00 0.00 0.00 3.66
2688 3177 6.758886 CCTGTGGTCTCTTGATAGTCAAATAC 59.241 42.308 0.00 0.00 35.73 1.89
2689 3178 7.364232 CCTGTGGTCTCTTGATAGTCAAATACT 60.364 40.741 0.00 0.00 42.62 2.12
2690 3179 7.548097 TGTGGTCTCTTGATAGTCAAATACTC 58.452 38.462 0.00 0.00 39.80 2.59
2691 3180 6.981559 GTGGTCTCTTGATAGTCAAATACTCC 59.018 42.308 0.00 0.00 39.80 3.85
2692 3181 6.098409 TGGTCTCTTGATAGTCAAATACTCCC 59.902 42.308 0.00 0.00 39.80 4.30
2693 3182 6.325286 GGTCTCTTGATAGTCAAATACTCCCT 59.675 42.308 0.00 0.00 39.80 4.20
2695 3184 6.551601 TCTCTTGATAGTCAAATACTCCCTCC 59.448 42.308 0.00 0.00 39.80 4.30
2699 3188 2.108970 AGTCAAATACTCCCTCCGTCC 58.891 52.381 0.00 0.00 30.33 4.79
2700 3189 1.138464 GTCAAATACTCCCTCCGTCCC 59.862 57.143 0.00 0.00 0.00 4.46
2701 3190 0.104304 CAAATACTCCCTCCGTCCCG 59.896 60.000 0.00 0.00 0.00 5.14
2703 3192 0.032813 AATACTCCCTCCGTCCCGAA 60.033 55.000 0.00 0.00 0.00 4.30
2705 3194 0.032813 TACTCCCTCCGTCCCGAAAT 60.033 55.000 0.00 0.00 0.00 2.17
2708 3197 0.826062 TCCCTCCGTCCCGAAATAAC 59.174 55.000 0.00 0.00 0.00 1.89
2709 3198 0.828677 CCCTCCGTCCCGAAATAACT 59.171 55.000 0.00 0.00 0.00 2.24
2711 3200 1.206371 CCTCCGTCCCGAAATAACTGT 59.794 52.381 0.00 0.00 0.00 3.55
2712 3201 2.537401 CTCCGTCCCGAAATAACTGTC 58.463 52.381 0.00 0.00 0.00 3.51
2713 3202 2.165845 CTCCGTCCCGAAATAACTGTCT 59.834 50.000 0.00 0.00 0.00 3.41
2714 3203 2.165030 TCCGTCCCGAAATAACTGTCTC 59.835 50.000 0.00 0.00 0.00 3.36
2716 3205 3.581755 CGTCCCGAAATAACTGTCTCAA 58.418 45.455 0.00 0.00 0.00 3.02
2717 3206 3.612860 CGTCCCGAAATAACTGTCTCAAG 59.387 47.826 0.00 0.00 0.00 3.02
2718 3207 3.371285 GTCCCGAAATAACTGTCTCAAGC 59.629 47.826 0.00 0.00 0.00 4.01
2720 3209 4.003648 CCCGAAATAACTGTCTCAAGCTT 58.996 43.478 0.00 0.00 0.00 3.74
2721 3210 5.046878 TCCCGAAATAACTGTCTCAAGCTTA 60.047 40.000 0.00 0.00 0.00 3.09
2722 3211 5.292101 CCCGAAATAACTGTCTCAAGCTTAG 59.708 44.000 0.00 0.00 0.00 2.18
2723 3212 5.869888 CCGAAATAACTGTCTCAAGCTTAGT 59.130 40.000 0.00 0.00 0.00 2.24
2725 3214 7.009357 CCGAAATAACTGTCTCAAGCTTAGTAC 59.991 40.741 0.00 0.00 0.00 2.73
2726 3215 7.541091 CGAAATAACTGTCTCAAGCTTAGTACA 59.459 37.037 0.00 2.68 0.00 2.90
2727 3216 9.204570 GAAATAACTGTCTCAAGCTTAGTACAA 57.795 33.333 0.00 0.00 0.00 2.41
2728 3217 8.535690 AATAACTGTCTCAAGCTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
2731 3220 6.583562 ACTGTCTCAAGCTTAGTACAACTTT 58.416 36.000 0.00 0.00 0.00 2.66
2732 3221 6.480320 ACTGTCTCAAGCTTAGTACAACTTTG 59.520 38.462 0.00 0.00 0.00 2.77
2733 3222 6.346096 TGTCTCAAGCTTAGTACAACTTTGT 58.654 36.000 0.00 0.00 44.86 2.83
2734 3223 7.494211 TGTCTCAAGCTTAGTACAACTTTGTA 58.506 34.615 0.00 0.00 42.35 2.41
2769 3262 8.372459 AGTACAAAGTTGAACATATGACCACTA 58.628 33.333 10.38 0.00 0.00 2.74
2771 3264 6.430000 ACAAAGTTGAACATATGACCACTACC 59.570 38.462 10.38 0.00 0.00 3.18
2789 3282 5.353123 CACTACCAATGGTTGTATGTGTACC 59.647 44.000 18.34 0.00 39.41 3.34
2797 3290 9.114952 CAATGGTTGTATGTGTACCAATATGTA 57.885 33.333 0.00 0.00 44.49 2.29
2798 3291 9.688091 AATGGTTGTATGTGTACCAATATGTAA 57.312 29.630 0.00 0.00 44.49 2.41
2799 3292 9.688091 ATGGTTGTATGTGTACCAATATGTAAA 57.312 29.630 0.00 0.00 44.49 2.01
2800 3293 9.516546 TGGTTGTATGTGTACCAATATGTAAAA 57.483 29.630 0.00 0.00 38.92 1.52
2907 3400 4.199432 AGATTCTAGAACACACAGCTGG 57.801 45.455 19.93 9.66 0.00 4.85
2920 3413 5.425539 ACACACAGCTGGTTAAGTAGGATAT 59.574 40.000 19.93 0.00 0.00 1.63
2921 3414 6.610020 ACACACAGCTGGTTAAGTAGGATATA 59.390 38.462 19.93 0.00 0.00 0.86
2926 3419 7.344871 ACAGCTGGTTAAGTAGGATATACAGTT 59.655 37.037 19.93 0.00 0.00 3.16
2936 3429 7.828712 AGTAGGATATACAGTTATTTCGAGGC 58.171 38.462 0.00 0.00 0.00 4.70
2940 3433 8.470805 AGGATATACAGTTATTTCGAGGCATAG 58.529 37.037 0.00 0.00 0.00 2.23
2961 3454 7.965107 GCATAGTCAGTCAGAACTAAAATTTGG 59.035 37.037 0.00 0.00 33.25 3.28
2969 3463 8.652290 AGTCAGAACTAAAATTTGGTACTCTCT 58.348 33.333 0.00 0.00 32.59 3.10
3074 3569 7.036996 TGTAAAGATGCAAACAAATCAGTCA 57.963 32.000 0.00 0.00 0.00 3.41
3099 3594 0.881118 AAACACCGTGATGATGTGGC 59.119 50.000 5.28 0.00 0.00 5.01
3213 3712 6.857964 CACTCCATGTTTTTAGTTCACACATC 59.142 38.462 0.00 0.00 0.00 3.06
3214 3713 5.996219 TCCATGTTTTTAGTTCACACATCG 58.004 37.500 0.00 0.00 0.00 3.84
3215 3714 4.616802 CCATGTTTTTAGTTCACACATCGC 59.383 41.667 0.00 0.00 0.00 4.58
3221 3720 2.455674 AGTTCACACATCGCTGCTTA 57.544 45.000 0.00 0.00 0.00 3.09
3233 3732 2.027192 TCGCTGCTTACAAGAATTCCCT 60.027 45.455 0.65 0.00 0.00 4.20
3237 3736 4.379918 GCTGCTTACAAGAATTCCCTTCAC 60.380 45.833 0.65 0.00 36.24 3.18
3264 3763 1.338973 CAACTGTCAACATTGGCTGCT 59.661 47.619 0.00 0.00 35.47 4.24
3266 3765 3.077484 ACTGTCAACATTGGCTGCTAT 57.923 42.857 0.00 0.00 35.47 2.97
3267 3766 3.012518 ACTGTCAACATTGGCTGCTATC 58.987 45.455 0.00 0.00 35.47 2.08
3270 3769 3.191162 TGTCAACATTGGCTGCTATCAAC 59.809 43.478 0.00 0.00 33.01 3.18
3374 3873 6.524734 TCCATGGACACACTTATGATATCAC 58.475 40.000 11.44 0.00 0.00 3.06
3552 4051 5.141182 TCCTTAAGATAGCTGACTTCGGAT 58.859 41.667 3.36 0.00 0.00 4.18
3623 4122 3.259625 TGATCACACTTTGGTATCGTCCA 59.740 43.478 0.00 0.00 35.49 4.02
3636 4135 2.380084 TCGTCCACCTGAACTAATGC 57.620 50.000 0.00 0.00 0.00 3.56
3728 4227 1.898154 CGAGCCTATATTCCCCGGG 59.102 63.158 15.80 15.80 0.00 5.73
3752 4253 2.253610 ACAGAGGTTGGTCCATACGAA 58.746 47.619 0.00 0.00 39.02 3.85
3753 4254 2.635915 ACAGAGGTTGGTCCATACGAAA 59.364 45.455 0.00 0.00 39.02 3.46
3785 4286 8.000435 GCTTCGCATAATTATTTGCAGAAAATC 59.000 33.333 10.76 5.12 39.29 2.17
3789 4290 7.514903 CGCATAATTATTTGCAGAAAATCGCAA 60.515 33.333 10.76 0.00 45.93 4.85
4084 4585 6.444633 TCTACTTTGAACCAGTAGAAAGTCG 58.555 40.000 7.24 5.58 46.40 4.18
4143 4646 7.654022 AGCTAGAGATAAAAACAGAGTAGCT 57.346 36.000 0.00 0.00 36.69 3.32
4271 4776 7.726033 ATAATAGTCTTCTCCTCACAAGTGT 57.274 36.000 0.00 0.00 0.00 3.55
4344 4849 0.463833 CATCAAGCCTTCCCCGGTAC 60.464 60.000 0.00 0.00 0.00 3.34
4406 4911 1.408702 GCACAAAAGGTCCTGCTCAAA 59.591 47.619 0.00 0.00 0.00 2.69
4435 4940 8.635877 TTCGAACTTATTTCTGCTATTCTCTC 57.364 34.615 0.00 0.00 31.20 3.20
4436 4941 7.772166 TCGAACTTATTTCTGCTATTCTCTCA 58.228 34.615 0.00 0.00 31.20 3.27
4494 4999 3.915437 TTCAGAAAATTGAGGGCGAAC 57.085 42.857 0.00 0.00 0.00 3.95
4557 5062 2.489329 ACAAAATCATGGTCGCAGAAGG 59.511 45.455 0.00 0.00 39.69 3.46
4652 5157 6.521133 GCAAGAATTTTGTCTCAACTGTATCG 59.479 38.462 0.00 0.00 0.00 2.92
4654 5159 7.730364 AGAATTTTGTCTCAACTGTATCGTT 57.270 32.000 0.00 0.00 0.00 3.85
4660 5165 4.988540 TGTCTCAACTGTATCGTTTGGAAG 59.011 41.667 0.00 0.00 0.00 3.46
4675 5180 5.493809 GTTTGGAAGTTACCACTATGCCTA 58.506 41.667 0.00 0.00 39.85 3.93
4676 5181 5.353394 TTGGAAGTTACCACTATGCCTAG 57.647 43.478 0.00 0.00 39.85 3.02
4677 5182 4.616553 TGGAAGTTACCACTATGCCTAGA 58.383 43.478 2.75 0.00 34.77 2.43
4680 5185 5.452077 GGAAGTTACCACTATGCCTAGACAG 60.452 48.000 2.75 0.00 30.68 3.51
4780 5290 6.948309 AGGTCTATGACTAAAAGGCAAATGTT 59.052 34.615 0.00 0.00 36.42 2.71
4825 5335 1.526887 CTGGTGACAAGTACAAGCACG 59.473 52.381 0.00 0.00 42.06 5.34
4891 5401 6.692849 ATTGGTCATAGCATAGATTCCTCA 57.307 37.500 0.00 0.00 0.00 3.86
4969 5479 2.224305 GCCGAGCCTACTATTTGGTCAT 60.224 50.000 0.00 0.00 0.00 3.06
5067 5577 0.107456 CTCATAGGTGCATTCCGGCT 59.893 55.000 0.00 0.00 34.04 5.52
5241 5773 1.670087 CCTGGTCACAGTAGCTGTTCG 60.670 57.143 0.00 0.00 42.59 3.95
5247 5779 4.159857 GTCACAGTAGCTGTTCGTCTTAG 58.840 47.826 0.00 0.00 42.59 2.18
5303 5835 9.751542 TTAGAGAGCATAATAAAGTAGAGTTGC 57.248 33.333 0.00 0.00 0.00 4.17
5310 5842 8.122952 GCATAATAAAGTAGAGTTGCGAACAAT 58.877 33.333 0.00 0.00 38.27 2.71
5343 5875 7.267857 TGTACATATGAGATTTCACCAGTGAG 58.732 38.462 10.38 0.00 41.13 3.51
5344 5876 5.121811 ACATATGAGATTTCACCAGTGAGC 58.878 41.667 10.38 0.00 41.13 4.26
5345 5877 3.708403 ATGAGATTTCACCAGTGAGCA 57.292 42.857 0.09 0.00 41.13 4.26
5414 6027 3.118956 CGACCCTCTAGCATTCAAGAACT 60.119 47.826 0.00 0.00 0.00 3.01
5435 6048 7.613411 AGAACTGATAAAAATTCCCAGAAGAGG 59.387 37.037 0.00 0.00 0.00 3.69
5455 6068 2.036346 GGAGGCTTGCATGAACAGTTTT 59.964 45.455 3.33 0.00 0.00 2.43
5470 6083 6.544197 TGAACAGTTTTCCAAACTAGTATGCA 59.456 34.615 0.00 0.00 0.00 3.96
5533 6146 2.682856 TGAACAAAAGGAGCACTCACAC 59.317 45.455 0.00 0.00 0.00 3.82
5538 6151 1.123077 AAGGAGCACTCACACACTGA 58.877 50.000 0.00 0.00 0.00 3.41
5545 6158 2.052779 CTCACACACTGAGGCTCCA 58.947 57.895 12.86 0.00 42.69 3.86
5604 6217 8.691797 ACAAACAACAACCAAGATTAAGTACAT 58.308 29.630 0.00 0.00 0.00 2.29
5784 6409 0.415429 AGGAGGAGGAGGAGCTGAAA 59.585 55.000 0.00 0.00 0.00 2.69
5864 6489 0.682209 CCTTCAGCCACCCATCCTTG 60.682 60.000 0.00 0.00 0.00 3.61
5892 6517 1.520564 AACTGCGTTGCGTGTCAGA 60.521 52.632 0.00 0.00 0.00 3.27
5932 6557 0.688487 AAGCCATTGGTGCATTTGCT 59.312 45.000 4.26 0.00 42.66 3.91
5949 6574 2.781923 TGCTAATGCTGAGTTTGCTGA 58.218 42.857 0.00 0.00 40.48 4.26
5980 6605 2.124570 CCGGAGCATTGTGGAGGG 60.125 66.667 0.00 0.00 0.00 4.30
6007 6632 2.044555 CCTGACCGCCAGAGTCGTA 61.045 63.158 4.84 0.00 45.78 3.43
6032 6667 2.555757 GCAAGGATTCAAAGTGTCAGCT 59.444 45.455 0.00 0.00 0.00 4.24
6033 6668 3.611057 GCAAGGATTCAAAGTGTCAGCTG 60.611 47.826 7.63 7.63 0.00 4.24
6039 6674 2.574450 TCAAAGTGTCAGCTGAATGCA 58.426 42.857 20.19 9.92 45.94 3.96
6049 6684 2.490509 CAGCTGAATGCACCTGAATGAA 59.509 45.455 8.42 0.00 45.94 2.57
6080 6715 0.249155 GCAGAGCAAGCAAGCAACAA 60.249 50.000 3.19 0.00 36.85 2.83
6091 6726 2.294233 GCAAGCAACAATGACAGGAGAA 59.706 45.455 0.00 0.00 0.00 2.87
6100 6735 0.491823 TGACAGGAGAAGGGGAAGGA 59.508 55.000 0.00 0.00 0.00 3.36
6112 6747 5.074515 AGAAGGGGAAGGAGAACAAATTACA 59.925 40.000 0.00 0.00 0.00 2.41
6116 6751 4.083484 GGGAAGGAGAACAAATTACACGTG 60.083 45.833 15.48 15.48 0.00 4.49
6146 6781 1.445582 GAATTCGTCGCCGTGGTCT 60.446 57.895 0.00 0.00 35.01 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 1.162800 GCTTGCCTAGGCTTGATCCG 61.163 60.000 33.07 14.42 42.51 4.18
76 79 1.001393 TCCGTTTGGAATGGGAGCC 60.001 57.895 0.00 0.00 42.85 4.70
91 94 1.668237 TGATTGTGTTGTGTGTGTCCG 59.332 47.619 0.00 0.00 0.00 4.79
116 119 3.007831 ACACCTGCCCAACCAAATAATTG 59.992 43.478 0.00 0.00 36.25 2.32
119 122 2.366916 CAACACCTGCCCAACCAAATAA 59.633 45.455 0.00 0.00 0.00 1.40
224 233 4.639310 AGATCTTTTGGCTGCTGATTGTAG 59.361 41.667 0.00 0.00 0.00 2.74
280 289 2.463752 TGGGTACATGTCACTCCTACC 58.536 52.381 0.00 1.80 0.00 3.18
306 315 8.287503 GGAGTACAAAATTAAAATCACTCGTGT 58.712 33.333 0.00 0.00 33.58 4.49
351 380 8.948631 TCAAGATTCTAATGATCTAAACGCTT 57.051 30.769 0.00 0.00 0.00 4.68
360 389 9.342308 TGGGTTGTATTCAAGATTCTAATGATC 57.658 33.333 0.00 0.00 33.97 2.92
362 391 8.548025 TCTGGGTTGTATTCAAGATTCTAATGA 58.452 33.333 0.00 0.00 33.97 2.57
363 392 8.737168 TCTGGGTTGTATTCAAGATTCTAATG 57.263 34.615 0.00 0.00 33.97 1.90
364 393 9.927081 ATTCTGGGTTGTATTCAAGATTCTAAT 57.073 29.630 0.00 0.00 33.97 1.73
365 394 9.177608 CATTCTGGGTTGTATTCAAGATTCTAA 57.822 33.333 0.00 0.00 33.97 2.10
398 427 9.521841 TTACCATGGAGAACATTACATGTAAAA 57.478 29.630 21.47 2.72 44.07 1.52
426 458 7.202972 TGTATTGTACCCCAAGCTATACTTT 57.797 36.000 0.00 0.00 36.04 2.66
429 461 7.771826 TCTTTTGTATTGTACCCCAAGCTATAC 59.228 37.037 0.00 0.00 36.25 1.47
433 465 4.993028 TCTTTTGTATTGTACCCCAAGCT 58.007 39.130 0.00 0.00 36.25 3.74
435 467 6.715264 ACTCTTCTTTTGTATTGTACCCCAAG 59.285 38.462 0.00 0.00 36.25 3.61
436 468 6.607019 ACTCTTCTTTTGTATTGTACCCCAA 58.393 36.000 0.00 0.00 37.49 4.12
437 469 6.195600 ACTCTTCTTTTGTATTGTACCCCA 57.804 37.500 0.00 0.00 0.00 4.96
438 470 7.282450 CCATACTCTTCTTTTGTATTGTACCCC 59.718 40.741 0.00 0.00 0.00 4.95
439 471 7.282450 CCCATACTCTTCTTTTGTATTGTACCC 59.718 40.741 0.00 0.00 0.00 3.69
440 472 7.282450 CCCCATACTCTTCTTTTGTATTGTACC 59.718 40.741 0.00 0.00 0.00 3.34
441 473 7.201705 GCCCCATACTCTTCTTTTGTATTGTAC 60.202 40.741 0.00 0.00 0.00 2.90
442 474 6.826741 GCCCCATACTCTTCTTTTGTATTGTA 59.173 38.462 0.00 0.00 0.00 2.41
443 475 5.652452 GCCCCATACTCTTCTTTTGTATTGT 59.348 40.000 0.00 0.00 0.00 2.71
444 476 5.220854 CGCCCCATACTCTTCTTTTGTATTG 60.221 44.000 0.00 0.00 0.00 1.90
445 477 4.881850 CGCCCCATACTCTTCTTTTGTATT 59.118 41.667 0.00 0.00 0.00 1.89
446 478 4.163458 TCGCCCCATACTCTTCTTTTGTAT 59.837 41.667 0.00 0.00 0.00 2.29
464 506 2.961768 CCACATGTTGGTTCGCCC 59.038 61.111 0.00 0.00 41.10 6.13
473 515 4.202567 ACCTAACCATCTCAACCACATGTT 60.203 41.667 0.00 0.00 37.80 2.71
474 516 3.330701 ACCTAACCATCTCAACCACATGT 59.669 43.478 0.00 0.00 0.00 3.21
475 517 3.691118 CACCTAACCATCTCAACCACATG 59.309 47.826 0.00 0.00 0.00 3.21
476 518 3.308402 CCACCTAACCATCTCAACCACAT 60.308 47.826 0.00 0.00 0.00 3.21
477 519 2.039746 CCACCTAACCATCTCAACCACA 59.960 50.000 0.00 0.00 0.00 4.17
478 520 2.304761 TCCACCTAACCATCTCAACCAC 59.695 50.000 0.00 0.00 0.00 4.16
479 521 2.304761 GTCCACCTAACCATCTCAACCA 59.695 50.000 0.00 0.00 0.00 3.67
480 522 2.304761 TGTCCACCTAACCATCTCAACC 59.695 50.000 0.00 0.00 0.00 3.77
481 523 3.008049 ACTGTCCACCTAACCATCTCAAC 59.992 47.826 0.00 0.00 0.00 3.18
482 524 3.007940 CACTGTCCACCTAACCATCTCAA 59.992 47.826 0.00 0.00 0.00 3.02
483 525 2.567169 CACTGTCCACCTAACCATCTCA 59.433 50.000 0.00 0.00 0.00 3.27
484 526 2.093447 CCACTGTCCACCTAACCATCTC 60.093 54.545 0.00 0.00 0.00 2.75
485 527 1.909302 CCACTGTCCACCTAACCATCT 59.091 52.381 0.00 0.00 0.00 2.90
486 528 1.628846 ACCACTGTCCACCTAACCATC 59.371 52.381 0.00 0.00 0.00 3.51
487 529 1.742308 ACCACTGTCCACCTAACCAT 58.258 50.000 0.00 0.00 0.00 3.55
488 530 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
489 531 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
490 532 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
504 546 2.322975 CCCTGGTAGGTTGGGGATACC 61.323 61.905 0.00 0.00 46.50 2.73
505 547 1.137697 CCCTGGTAGGTTGGGGATAC 58.862 60.000 0.00 0.00 41.25 2.24
506 548 0.726366 ACCCTGGTAGGTTGGGGATA 59.274 55.000 3.72 0.00 44.97 2.59
507 549 1.483704 ACCCTGGTAGGTTGGGGAT 59.516 57.895 3.72 0.00 44.97 3.85
508 550 2.965473 ACCCTGGTAGGTTGGGGA 59.035 61.111 3.72 0.00 44.97 4.81
514 556 3.309121 CCATGATTTGAACCCTGGTAGGT 60.309 47.826 0.00 0.00 44.00 3.08
515 557 3.290710 CCATGATTTGAACCCTGGTAGG 58.709 50.000 0.00 0.00 34.30 3.18
516 558 3.696051 CACCATGATTTGAACCCTGGTAG 59.304 47.826 0.00 0.00 35.31 3.18
517 559 3.696045 CACCATGATTTGAACCCTGGTA 58.304 45.455 0.00 0.00 35.31 3.25
518 560 2.528564 CACCATGATTTGAACCCTGGT 58.471 47.619 0.00 0.00 37.47 4.00
519 561 1.205417 GCACCATGATTTGAACCCTGG 59.795 52.381 0.00 0.00 0.00 4.45
520 562 2.165030 GAGCACCATGATTTGAACCCTG 59.835 50.000 0.00 0.00 0.00 4.45
521 563 2.450476 GAGCACCATGATTTGAACCCT 58.550 47.619 0.00 0.00 0.00 4.34
522 564 1.133025 CGAGCACCATGATTTGAACCC 59.867 52.381 0.00 0.00 0.00 4.11
523 565 1.468054 GCGAGCACCATGATTTGAACC 60.468 52.381 0.00 0.00 0.00 3.62
524 566 1.199789 TGCGAGCACCATGATTTGAAC 59.800 47.619 0.00 0.00 0.00 3.18
525 567 1.532523 TGCGAGCACCATGATTTGAA 58.467 45.000 0.00 0.00 0.00 2.69
526 568 1.753930 ATGCGAGCACCATGATTTGA 58.246 45.000 0.00 0.00 0.00 2.69
527 569 2.572191 AATGCGAGCACCATGATTTG 57.428 45.000 0.00 0.00 0.00 2.32
528 570 4.924305 AATAATGCGAGCACCATGATTT 57.076 36.364 0.00 0.00 0.00 2.17
529 571 4.581824 AGAAATAATGCGAGCACCATGATT 59.418 37.500 0.00 0.00 0.00 2.57
530 572 4.023450 CAGAAATAATGCGAGCACCATGAT 60.023 41.667 0.00 0.00 0.00 2.45
531 573 3.313249 CAGAAATAATGCGAGCACCATGA 59.687 43.478 0.00 0.00 0.00 3.07
532 574 3.549423 CCAGAAATAATGCGAGCACCATG 60.549 47.826 0.00 0.00 0.00 3.66
533 575 2.620115 CCAGAAATAATGCGAGCACCAT 59.380 45.455 0.00 0.00 0.00 3.55
534 576 2.016318 CCAGAAATAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
535 577 2.288666 TCCAGAAATAATGCGAGCACC 58.711 47.619 0.00 0.00 0.00 5.01
536 578 4.558538 AATCCAGAAATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
537 579 6.882610 ATAAATCCAGAAATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
538 580 8.579682 AAAATAAATCCAGAAATAATGCGAGC 57.420 30.769 0.00 0.00 0.00 5.03
548 590 8.691797 CCGGAAATCCTAAAATAAATCCAGAAA 58.308 33.333 0.00 0.00 0.00 2.52
549 591 7.201875 GCCGGAAATCCTAAAATAAATCCAGAA 60.202 37.037 5.05 0.00 0.00 3.02
550 592 6.264518 GCCGGAAATCCTAAAATAAATCCAGA 59.735 38.462 5.05 0.00 0.00 3.86
551 593 6.447162 GCCGGAAATCCTAAAATAAATCCAG 58.553 40.000 5.05 0.00 0.00 3.86
552 594 5.009210 CGCCGGAAATCCTAAAATAAATCCA 59.991 40.000 5.05 0.00 0.00 3.41
553 595 5.239963 TCGCCGGAAATCCTAAAATAAATCC 59.760 40.000 5.05 0.00 0.00 3.01
554 596 6.308371 TCGCCGGAAATCCTAAAATAAATC 57.692 37.500 5.05 0.00 0.00 2.17
555 597 6.677913 CATCGCCGGAAATCCTAAAATAAAT 58.322 36.000 5.05 0.00 0.00 1.40
556 598 5.506649 GCATCGCCGGAAATCCTAAAATAAA 60.507 40.000 5.05 0.00 0.00 1.40
557 599 4.023536 GCATCGCCGGAAATCCTAAAATAA 60.024 41.667 5.05 0.00 0.00 1.40
558 600 3.500680 GCATCGCCGGAAATCCTAAAATA 59.499 43.478 5.05 0.00 0.00 1.40
559 601 2.293399 GCATCGCCGGAAATCCTAAAAT 59.707 45.455 5.05 0.00 0.00 1.82
560 602 1.673920 GCATCGCCGGAAATCCTAAAA 59.326 47.619 5.05 0.00 0.00 1.52
561 603 1.305201 GCATCGCCGGAAATCCTAAA 58.695 50.000 5.05 0.00 0.00 1.85
562 604 0.878523 CGCATCGCCGGAAATCCTAA 60.879 55.000 5.05 0.00 0.00 2.69
563 605 1.300620 CGCATCGCCGGAAATCCTA 60.301 57.895 5.05 0.00 0.00 2.94
564 606 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
575 617 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
576 618 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
577 619 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
578 620 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
579 621 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
580 622 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
581 623 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
582 624 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
583 625 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
584 626 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
585 627 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
586 628 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
587 629 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
613 655 2.467826 GCTACCGTAGACGCCTCGT 61.468 63.158 9.88 0.00 45.10 4.18
614 656 1.712977 AAGCTACCGTAGACGCCTCG 61.713 60.000 9.88 0.00 38.18 4.63
615 657 0.029167 GAAGCTACCGTAGACGCCTC 59.971 60.000 9.88 0.00 38.18 4.70
616 658 1.712977 CGAAGCTACCGTAGACGCCT 61.713 60.000 9.88 0.00 38.18 5.52
617 659 1.298190 CGAAGCTACCGTAGACGCC 60.298 63.158 9.88 0.00 38.18 5.68
618 660 0.652592 TACGAAGCTACCGTAGACGC 59.347 55.000 14.77 0.00 40.95 5.19
619 661 3.389687 TTTACGAAGCTACCGTAGACG 57.610 47.619 17.07 12.58 42.42 4.18
620 662 5.167218 AGATTTACGAAGCTACCGTAGAC 57.833 43.478 17.07 13.34 42.42 2.59
621 663 4.877823 TGAGATTTACGAAGCTACCGTAGA 59.122 41.667 17.07 14.58 42.42 2.59
622 664 5.165911 TGAGATTTACGAAGCTACCGTAG 57.834 43.478 17.07 0.76 42.42 3.51
623 665 5.355071 TCTTGAGATTTACGAAGCTACCGTA 59.645 40.000 14.77 14.77 40.95 4.02
624 666 4.157289 TCTTGAGATTTACGAAGCTACCGT 59.843 41.667 16.53 16.53 43.26 4.83
625 667 4.669318 TCTTGAGATTTACGAAGCTACCG 58.331 43.478 6.86 6.86 30.22 4.02
626 668 6.273825 TCATCTTGAGATTTACGAAGCTACC 58.726 40.000 0.00 0.00 30.22 3.18
627 669 7.938563 ATCATCTTGAGATTTACGAAGCTAC 57.061 36.000 0.00 0.00 30.22 3.58
628 670 9.631452 CATATCATCTTGAGATTTACGAAGCTA 57.369 33.333 0.00 0.00 30.22 3.32
629 671 7.117523 GCATATCATCTTGAGATTTACGAAGCT 59.882 37.037 0.00 0.00 33.40 3.74
630 672 7.232994 GCATATCATCTTGAGATTTACGAAGC 58.767 38.462 0.00 0.00 31.21 3.86
631 673 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
632 674 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
633 675 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
634 676 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
635 677 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
636 678 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
637 679 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
638 680 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
639 681 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
640 682 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
641 683 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
642 684 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
643 685 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
644 686 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
645 687 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
646 688 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
647 689 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
648 690 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
649 691 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
650 692 1.418334 AAGAGACTGAGCCGGCATAT 58.582 50.000 31.54 8.11 0.00 1.78
651 693 1.957177 CTAAGAGACTGAGCCGGCATA 59.043 52.381 31.54 16.21 0.00 3.14
652 694 0.749649 CTAAGAGACTGAGCCGGCAT 59.250 55.000 31.54 14.28 0.00 4.40
653 695 0.323451 TCTAAGAGACTGAGCCGGCA 60.323 55.000 31.54 7.98 0.00 5.69
654 696 0.383949 CTCTAAGAGACTGAGCCGGC 59.616 60.000 21.89 21.89 0.00 6.13
655 697 1.028905 CCTCTAAGAGACTGAGCCGG 58.971 60.000 0.00 0.00 0.00 6.13
656 698 1.403679 CACCTCTAAGAGACTGAGCCG 59.596 57.143 0.00 0.00 0.00 5.52
657 699 1.136110 GCACCTCTAAGAGACTGAGCC 59.864 57.143 0.00 0.00 0.00 4.70
658 700 2.099098 GAGCACCTCTAAGAGACTGAGC 59.901 54.545 0.00 0.00 0.00 4.26
659 701 3.351740 TGAGCACCTCTAAGAGACTGAG 58.648 50.000 0.00 0.00 0.00 3.35
660 702 3.441500 TGAGCACCTCTAAGAGACTGA 57.558 47.619 0.00 0.00 0.00 3.41
661 703 4.278170 CCTATGAGCACCTCTAAGAGACTG 59.722 50.000 0.00 0.00 0.00 3.51
662 704 4.469657 CCTATGAGCACCTCTAAGAGACT 58.530 47.826 0.00 0.00 0.00 3.24
663 705 3.572255 CCCTATGAGCACCTCTAAGAGAC 59.428 52.174 0.00 0.00 0.00 3.36
664 706 3.437198 CCCCTATGAGCACCTCTAAGAGA 60.437 52.174 0.00 0.00 0.00 3.10
665 707 2.896685 CCCCTATGAGCACCTCTAAGAG 59.103 54.545 0.00 0.00 0.00 2.85
666 708 2.247635 ACCCCTATGAGCACCTCTAAGA 59.752 50.000 0.00 0.00 0.00 2.10
667 709 2.683768 ACCCCTATGAGCACCTCTAAG 58.316 52.381 0.00 0.00 0.00 2.18
668 710 2.868964 ACCCCTATGAGCACCTCTAA 57.131 50.000 0.00 0.00 0.00 2.10
669 711 2.110188 CCTACCCCTATGAGCACCTCTA 59.890 54.545 0.00 0.00 0.00 2.43
670 712 1.133009 CCTACCCCTATGAGCACCTCT 60.133 57.143 0.00 0.00 0.00 3.69
671 713 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
672 714 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
673 715 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
674 716 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
675 717 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
676 718 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
677 719 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
678 720 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
679 721 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
680 722 0.619543 AACGCACACCCTACCCCTAT 60.620 55.000 0.00 0.00 0.00 2.57
681 723 1.229272 AACGCACACCCTACCCCTA 60.229 57.895 0.00 0.00 0.00 3.53
682 724 2.528378 AACGCACACCCTACCCCT 60.528 61.111 0.00 0.00 0.00 4.79
683 725 2.046604 GAACGCACACCCTACCCC 60.047 66.667 0.00 0.00 0.00 4.95
684 726 0.538118 TATGAACGCACACCCTACCC 59.462 55.000 0.00 0.00 0.00 3.69
685 727 2.277084 CTTATGAACGCACACCCTACC 58.723 52.381 0.00 0.00 0.00 3.18
686 728 2.277084 CCTTATGAACGCACACCCTAC 58.723 52.381 0.00 0.00 0.00 3.18
687 729 1.208535 CCCTTATGAACGCACACCCTA 59.791 52.381 0.00 0.00 0.00 3.53
688 730 0.035439 CCCTTATGAACGCACACCCT 60.035 55.000 0.00 0.00 0.00 4.34
689 731 0.322187 ACCCTTATGAACGCACACCC 60.322 55.000 0.00 0.00 0.00 4.61
690 732 0.802494 CACCCTTATGAACGCACACC 59.198 55.000 0.00 0.00 0.00 4.16
691 733 1.732259 CTCACCCTTATGAACGCACAC 59.268 52.381 0.00 0.00 0.00 3.82
692 734 1.346395 ACTCACCCTTATGAACGCACA 59.654 47.619 0.00 0.00 0.00 4.57
693 735 1.732259 CACTCACCCTTATGAACGCAC 59.268 52.381 0.00 0.00 0.00 5.34
694 736 1.346395 ACACTCACCCTTATGAACGCA 59.654 47.619 0.00 0.00 0.00 5.24
695 737 2.094762 ACACTCACCCTTATGAACGC 57.905 50.000 0.00 0.00 0.00 4.84
696 738 3.555956 GCATACACTCACCCTTATGAACG 59.444 47.826 0.00 0.00 0.00 3.95
697 739 3.555956 CGCATACACTCACCCTTATGAAC 59.444 47.826 0.00 0.00 0.00 3.18
698 740 3.792401 CGCATACACTCACCCTTATGAA 58.208 45.455 0.00 0.00 0.00 2.57
699 741 2.483013 GCGCATACACTCACCCTTATGA 60.483 50.000 0.30 0.00 0.00 2.15
700 742 1.867233 GCGCATACACTCACCCTTATG 59.133 52.381 0.30 0.00 0.00 1.90
701 743 1.538204 CGCGCATACACTCACCCTTAT 60.538 52.381 8.75 0.00 0.00 1.73
702 744 0.179121 CGCGCATACACTCACCCTTA 60.179 55.000 8.75 0.00 0.00 2.69
703 745 1.447838 CGCGCATACACTCACCCTT 60.448 57.895 8.75 0.00 0.00 3.95
704 746 2.184322 CGCGCATACACTCACCCT 59.816 61.111 8.75 0.00 0.00 4.34
705 747 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
706 748 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
707 749 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
708 750 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
709 751 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
710 752 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
711 753 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
712 754 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
713 755 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
714 756 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
715 757 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
716 758 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
720 762 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
721 763 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
722 764 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
723 765 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
724 766 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
725 767 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
726 768 3.801114 ATACAGACACAAGCGCTCATA 57.199 42.857 12.06 0.00 0.00 2.15
727 769 2.674852 CAATACAGACACAAGCGCTCAT 59.325 45.455 12.06 0.00 0.00 2.90
728 770 2.068519 CAATACAGACACAAGCGCTCA 58.931 47.619 12.06 0.00 0.00 4.26
729 771 2.337583 TCAATACAGACACAAGCGCTC 58.662 47.619 12.06 0.00 0.00 5.03
730 772 2.455674 TCAATACAGACACAAGCGCT 57.544 45.000 2.64 2.64 0.00 5.92
731 773 2.789092 GCATCAATACAGACACAAGCGC 60.789 50.000 0.00 0.00 0.00 5.92
732 774 2.674852 AGCATCAATACAGACACAAGCG 59.325 45.455 0.00 0.00 0.00 4.68
733 775 5.801350 TTAGCATCAATACAGACACAAGC 57.199 39.130 0.00 0.00 0.00 4.01
756 798 7.225734 CCCCGTTTTGTTGATTTCATACTTTTT 59.774 33.333 0.00 0.00 0.00 1.94
757 799 6.704050 CCCCGTTTTGTTGATTTCATACTTTT 59.296 34.615 0.00 0.00 0.00 2.27
758 800 6.183360 ACCCCGTTTTGTTGATTTCATACTTT 60.183 34.615 0.00 0.00 0.00 2.66
759 801 5.303333 ACCCCGTTTTGTTGATTTCATACTT 59.697 36.000 0.00 0.00 0.00 2.24
760 802 4.830600 ACCCCGTTTTGTTGATTTCATACT 59.169 37.500 0.00 0.00 0.00 2.12
761 803 5.128992 ACCCCGTTTTGTTGATTTCATAC 57.871 39.130 0.00 0.00 0.00 2.39
762 804 4.827835 TGACCCCGTTTTGTTGATTTCATA 59.172 37.500 0.00 0.00 0.00 2.15
763 805 3.639094 TGACCCCGTTTTGTTGATTTCAT 59.361 39.130 0.00 0.00 0.00 2.57
764 806 3.024547 TGACCCCGTTTTGTTGATTTCA 58.975 40.909 0.00 0.00 0.00 2.69
765 807 3.719173 TGACCCCGTTTTGTTGATTTC 57.281 42.857 0.00 0.00 0.00 2.17
766 808 4.473477 TTTGACCCCGTTTTGTTGATTT 57.527 36.364 0.00 0.00 0.00 2.17
767 809 4.473477 TTTTGACCCCGTTTTGTTGATT 57.527 36.364 0.00 0.00 0.00 2.57
768 810 4.081365 ACTTTTTGACCCCGTTTTGTTGAT 60.081 37.500 0.00 0.00 0.00 2.57
769 811 3.258622 ACTTTTTGACCCCGTTTTGTTGA 59.741 39.130 0.00 0.00 0.00 3.18
770 812 3.591023 ACTTTTTGACCCCGTTTTGTTG 58.409 40.909 0.00 0.00 0.00 3.33
1140 1189 1.446272 GGAGGCGTCCTTCTTCACG 60.446 63.158 18.26 0.00 40.17 4.35
1305 1362 1.740905 GGACGAGTTAGCTAGGCCC 59.259 63.158 0.00 0.00 39.34 5.80
1306 1363 1.359475 CGGACGAGTTAGCTAGGCC 59.641 63.158 1.13 1.13 41.52 5.19
1307 1364 1.359475 CCGGACGAGTTAGCTAGGC 59.641 63.158 0.00 0.00 0.00 3.93
1308 1365 1.359475 GCCGGACGAGTTAGCTAGG 59.641 63.158 5.05 0.00 0.00 3.02
1313 1370 0.531200 AAGAAGGCCGGACGAGTTAG 59.469 55.000 5.05 0.00 0.00 2.34
1328 1385 1.733402 CGGCAGCAACCACCAAAGAA 61.733 55.000 0.00 0.00 0.00 2.52
1342 1399 2.259511 GCCAAGCTTTTCCGGCAG 59.740 61.111 18.11 0.00 44.25 4.85
1430 1490 5.942872 AGAGCGAAATCGTGAATCAAAATT 58.057 33.333 4.59 0.00 42.22 1.82
1437 1497 1.927174 CGGAAGAGCGAAATCGTGAAT 59.073 47.619 4.59 0.00 42.22 2.57
1441 1501 0.736325 CCACGGAAGAGCGAAATCGT 60.736 55.000 4.59 0.00 42.22 3.73
1450 1510 0.951040 GCAGGACAACCACGGAAGAG 60.951 60.000 0.00 0.00 38.94 2.85
1461 1521 0.179234 TGGTTCAAGACGCAGGACAA 59.821 50.000 0.00 0.00 0.00 3.18
1467 1530 3.006430 TCTGATTACTGGTTCAAGACGCA 59.994 43.478 0.00 0.00 0.00 5.24
1472 1535 6.238320 GCAAGCTATCTGATTACTGGTTCAAG 60.238 42.308 0.00 0.00 0.00 3.02
1473 1536 5.586243 GCAAGCTATCTGATTACTGGTTCAA 59.414 40.000 0.00 0.00 0.00 2.69
1475 1538 4.513318 GGCAAGCTATCTGATTACTGGTTC 59.487 45.833 0.00 0.00 0.00 3.62
1476 1539 4.455606 GGCAAGCTATCTGATTACTGGTT 58.544 43.478 0.00 0.00 0.00 3.67
1478 1541 3.062763 CGGCAAGCTATCTGATTACTGG 58.937 50.000 0.00 0.00 0.00 4.00
1480 1543 4.372656 GAACGGCAAGCTATCTGATTACT 58.627 43.478 0.00 0.00 0.00 2.24
1481 1544 3.182572 CGAACGGCAAGCTATCTGATTAC 59.817 47.826 0.00 0.00 0.00 1.89
1541 1608 1.372128 CTGCGCAAAAGAGGTTGGC 60.372 57.895 13.05 0.00 0.00 4.52
1557 1624 0.956633 TCCTTGCTTCTTTGCAGCTG 59.043 50.000 10.11 10.11 44.27 4.24
1571 1638 1.699634 TCCTCTCACCCTTGTTCCTTG 59.300 52.381 0.00 0.00 0.00 3.61
1711 1779 3.092301 AGGCTGCTGGTTTCTTAAATCC 58.908 45.455 0.00 0.00 0.00 3.01
1798 1866 7.079182 TGACTTTGTTCGCCGATATATTTTT 57.921 32.000 0.00 0.00 0.00 1.94
1803 1871 3.866910 GGTTGACTTTGTTCGCCGATATA 59.133 43.478 0.00 0.00 0.00 0.86
1836 1904 1.745232 AACAAGCATTCCGCCGAATA 58.255 45.000 0.00 0.00 44.04 1.75
1838 1906 1.524848 TTAACAAGCATTCCGCCGAA 58.475 45.000 0.00 0.00 44.04 4.30
1841 1909 4.142469 ACTGTAATTAACAAGCATTCCGCC 60.142 41.667 0.00 0.00 37.74 6.13
1843 1911 5.799936 CCAACTGTAATTAACAAGCATTCCG 59.200 40.000 0.00 0.00 37.74 4.30
1844 1912 6.687604 ACCAACTGTAATTAACAAGCATTCC 58.312 36.000 0.00 0.00 37.74 3.01
1845 1913 9.855021 ATAACCAACTGTAATTAACAAGCATTC 57.145 29.630 0.00 0.00 37.74 2.67
1846 1914 9.855021 GATAACCAACTGTAATTAACAAGCATT 57.145 29.630 0.00 0.00 37.74 3.56
1847 1915 9.019656 TGATAACCAACTGTAATTAACAAGCAT 57.980 29.630 0.00 0.00 37.74 3.79
1848 1916 8.397575 TGATAACCAACTGTAATTAACAAGCA 57.602 30.769 0.00 0.00 37.74 3.91
1849 1917 9.503427 GATGATAACCAACTGTAATTAACAAGC 57.497 33.333 0.00 0.00 37.74 4.01
1850 1918 9.702726 CGATGATAACCAACTGTAATTAACAAG 57.297 33.333 0.00 0.00 37.74 3.16
1851 1919 8.178964 GCGATGATAACCAACTGTAATTAACAA 58.821 33.333 0.00 0.00 37.74 2.83
1852 1920 7.201661 GGCGATGATAACCAACTGTAATTAACA 60.202 37.037 0.00 0.00 36.42 2.41
1853 1921 7.130269 GGCGATGATAACCAACTGTAATTAAC 58.870 38.462 0.00 0.00 0.00 2.01
1854 1922 6.018588 CGGCGATGATAACCAACTGTAATTAA 60.019 38.462 0.00 0.00 0.00 1.40
1855 1923 5.464057 CGGCGATGATAACCAACTGTAATTA 59.536 40.000 0.00 0.00 0.00 1.40
1856 1924 4.272504 CGGCGATGATAACCAACTGTAATT 59.727 41.667 0.00 0.00 0.00 1.40
1857 1925 3.807622 CGGCGATGATAACCAACTGTAAT 59.192 43.478 0.00 0.00 0.00 1.89
1858 1926 3.191669 CGGCGATGATAACCAACTGTAA 58.808 45.455 0.00 0.00 0.00 2.41
1859 1927 2.166870 ACGGCGATGATAACCAACTGTA 59.833 45.455 16.62 0.00 0.00 2.74
1860 1928 1.066430 ACGGCGATGATAACCAACTGT 60.066 47.619 16.62 0.00 0.00 3.55
1861 1929 1.593006 GACGGCGATGATAACCAACTG 59.407 52.381 16.62 0.00 0.00 3.16
1862 1930 1.480954 AGACGGCGATGATAACCAACT 59.519 47.619 16.62 0.00 0.00 3.16
1863 1931 1.935933 AGACGGCGATGATAACCAAC 58.064 50.000 16.62 0.00 0.00 3.77
1864 1932 3.382227 TCTTAGACGGCGATGATAACCAA 59.618 43.478 16.62 0.00 0.00 3.67
1865 1933 2.953648 TCTTAGACGGCGATGATAACCA 59.046 45.455 16.62 0.00 0.00 3.67
1866 1934 3.637998 TCTTAGACGGCGATGATAACC 57.362 47.619 16.62 0.00 0.00 2.85
1867 1935 4.856664 TCTTCTTAGACGGCGATGATAAC 58.143 43.478 16.62 0.00 0.00 1.89
1868 1936 5.509716 TTCTTCTTAGACGGCGATGATAA 57.490 39.130 16.62 5.83 0.00 1.75
1869 1937 5.163591 TGTTTCTTCTTAGACGGCGATGATA 60.164 40.000 16.62 0.00 0.00 2.15
1870 1938 4.113354 GTTTCTTCTTAGACGGCGATGAT 58.887 43.478 16.62 0.00 0.00 2.45
1871 1939 3.057104 TGTTTCTTCTTAGACGGCGATGA 60.057 43.478 16.62 0.64 0.00 2.92
1872 1940 3.250744 TGTTTCTTCTTAGACGGCGATG 58.749 45.455 16.62 0.00 0.00 3.84
1873 1941 3.192844 TCTGTTTCTTCTTAGACGGCGAT 59.807 43.478 16.62 3.89 0.00 4.58
1874 1942 2.555325 TCTGTTTCTTCTTAGACGGCGA 59.445 45.455 16.62 0.00 0.00 5.54
1875 1943 2.917971 CTCTGTTTCTTCTTAGACGGCG 59.082 50.000 4.80 4.80 0.00 6.46
1876 1944 3.675698 CACTCTGTTTCTTCTTAGACGGC 59.324 47.826 0.00 0.00 0.00 5.68
1877 1945 4.022242 TCCACTCTGTTTCTTCTTAGACGG 60.022 45.833 0.00 0.00 0.00 4.79
1878 1946 5.122512 TCCACTCTGTTTCTTCTTAGACG 57.877 43.478 0.00 0.00 0.00 4.18
1879 1947 6.643360 GTCTTCCACTCTGTTTCTTCTTAGAC 59.357 42.308 0.00 0.00 0.00 2.59
1880 1948 6.515200 CGTCTTCCACTCTGTTTCTTCTTAGA 60.515 42.308 0.00 0.00 0.00 2.10
1881 1949 5.631512 CGTCTTCCACTCTGTTTCTTCTTAG 59.368 44.000 0.00 0.00 0.00 2.18
1882 1950 5.301045 TCGTCTTCCACTCTGTTTCTTCTTA 59.699 40.000 0.00 0.00 0.00 2.10
1883 1951 4.099573 TCGTCTTCCACTCTGTTTCTTCTT 59.900 41.667 0.00 0.00 0.00 2.52
1884 1952 3.637229 TCGTCTTCCACTCTGTTTCTTCT 59.363 43.478 0.00 0.00 0.00 2.85
1885 1953 3.978687 TCGTCTTCCACTCTGTTTCTTC 58.021 45.455 0.00 0.00 0.00 2.87
1886 1954 3.385111 ACTCGTCTTCCACTCTGTTTCTT 59.615 43.478 0.00 0.00 0.00 2.52
1887 1955 2.959707 ACTCGTCTTCCACTCTGTTTCT 59.040 45.455 0.00 0.00 0.00 2.52
1888 1956 3.372660 ACTCGTCTTCCACTCTGTTTC 57.627 47.619 0.00 0.00 0.00 2.78
1889 1957 3.385111 AGAACTCGTCTTCCACTCTGTTT 59.615 43.478 0.00 0.00 29.66 2.83
1890 1958 2.959707 AGAACTCGTCTTCCACTCTGTT 59.040 45.455 0.00 0.00 29.66 3.16
1891 1959 2.588620 AGAACTCGTCTTCCACTCTGT 58.411 47.619 0.00 0.00 29.66 3.41
1892 1960 4.974368 ATAGAACTCGTCTTCCACTCTG 57.026 45.455 0.00 0.00 37.84 3.35
1893 1961 4.767928 ACAATAGAACTCGTCTTCCACTCT 59.232 41.667 0.00 0.00 37.84 3.24
1894 1962 4.859798 CACAATAGAACTCGTCTTCCACTC 59.140 45.833 0.00 0.00 37.84 3.51
1895 1963 4.281182 ACACAATAGAACTCGTCTTCCACT 59.719 41.667 0.00 0.00 37.84 4.00
1896 1964 4.557205 ACACAATAGAACTCGTCTTCCAC 58.443 43.478 0.00 0.00 37.84 4.02
1897 1965 4.866508 ACACAATAGAACTCGTCTTCCA 57.133 40.909 0.00 0.00 37.84 3.53
1898 1966 5.471257 AGAACACAATAGAACTCGTCTTCC 58.529 41.667 0.00 0.00 37.84 3.46
1899 1967 8.690680 AATAGAACACAATAGAACTCGTCTTC 57.309 34.615 0.00 0.00 37.84 2.87
1960 2035 0.657312 CTGCACGCACACAAAAGAGA 59.343 50.000 0.00 0.00 0.00 3.10
1973 2048 2.819595 CCCGACCCAATCTGCACG 60.820 66.667 0.00 0.00 0.00 5.34
2000 2075 1.468127 TCGATCGCCTTGTACACGTTA 59.532 47.619 11.09 0.00 0.00 3.18
2195 2270 4.649692 TGTACTCGAAGACAAGGTAGAGT 58.350 43.478 0.00 1.55 41.22 3.24
2204 2279 2.521126 TGGTCCATGTACTCGAAGACA 58.479 47.619 1.83 1.83 0.00 3.41
2282 2357 4.102524 TGTTTCAGTGATGAAGGTACCTGT 59.897 41.667 17.14 5.70 0.00 4.00
2306 2399 0.627451 TTCAGGAAGGAGCATGCCAT 59.373 50.000 15.66 0.04 0.00 4.40
2309 2402 1.203287 GGTTTTCAGGAAGGAGCATGC 59.797 52.381 10.51 10.51 0.00 4.06
2313 2406 2.959030 ACAAAGGTTTTCAGGAAGGAGC 59.041 45.455 0.00 0.00 0.00 4.70
2315 2408 3.053245 TGGACAAAGGTTTTCAGGAAGGA 60.053 43.478 0.00 0.00 0.00 3.36
2321 2414 9.410556 CAGTTATTATTGGACAAAGGTTTTCAG 57.589 33.333 0.00 0.00 0.00 3.02
2338 2431 7.008901 CACGTCACGTACATGTTCAGTTATTAT 59.991 37.037 0.41 0.00 38.32 1.28
2339 2432 6.306117 CACGTCACGTACATGTTCAGTTATTA 59.694 38.462 0.41 0.00 38.32 0.98
2343 2436 2.792674 CACGTCACGTACATGTTCAGTT 59.207 45.455 0.41 0.00 38.32 3.16
2344 2437 2.033675 TCACGTCACGTACATGTTCAGT 59.966 45.455 0.41 0.00 38.32 3.41
2345 2438 2.657184 TCACGTCACGTACATGTTCAG 58.343 47.619 0.41 0.00 38.32 3.02
2346 2439 2.778187 TCACGTCACGTACATGTTCA 57.222 45.000 0.41 0.00 38.32 3.18
2347 2440 2.344441 CCATCACGTCACGTACATGTTC 59.656 50.000 16.50 0.00 38.32 3.18
2348 2441 2.288579 ACCATCACGTCACGTACATGTT 60.289 45.455 16.50 3.83 38.32 2.71
2349 2442 1.271379 ACCATCACGTCACGTACATGT 59.729 47.619 16.50 2.69 38.32 3.21
2361 2848 1.999735 ACGTAAATGCAGACCATCACG 59.000 47.619 0.00 0.00 31.43 4.35
2362 2849 3.426159 CCAACGTAAATGCAGACCATCAC 60.426 47.826 0.00 0.00 31.43 3.06
2368 2855 2.919666 ATGCCAACGTAAATGCAGAC 57.080 45.000 0.00 0.00 37.12 3.51
2372 2859 5.830900 TGTTTTTATGCCAACGTAAATGC 57.169 34.783 0.00 0.00 37.17 3.56
2392 2879 9.975218 ATAGTCCATTAAACTTAAGGAACATGT 57.025 29.630 7.53 0.00 0.00 3.21
2419 2908 6.814076 CAGGTCGTCTGTGATTATAGTTTC 57.186 41.667 1.42 0.00 38.64 2.78
2434 2923 1.126846 CAAATCTTCGCACAGGTCGTC 59.873 52.381 0.00 0.00 0.00 4.20
2436 2925 0.179215 GCAAATCTTCGCACAGGTCG 60.179 55.000 0.00 0.00 0.00 4.79
2437 2926 0.874390 TGCAAATCTTCGCACAGGTC 59.126 50.000 0.00 0.00 31.95 3.85
2438 2927 1.470098 GATGCAAATCTTCGCACAGGT 59.530 47.619 0.00 0.00 41.79 4.00
2439 2928 1.202222 GGATGCAAATCTTCGCACAGG 60.202 52.381 0.00 0.00 41.79 4.00
2440 2929 1.469703 TGGATGCAAATCTTCGCACAG 59.530 47.619 0.00 0.00 41.79 3.66
2441 2930 1.532523 TGGATGCAAATCTTCGCACA 58.467 45.000 0.00 0.00 41.79 4.57
2442 2931 2.162208 TCTTGGATGCAAATCTTCGCAC 59.838 45.455 0.00 0.00 41.79 5.34
2443 2932 2.435422 TCTTGGATGCAAATCTTCGCA 58.565 42.857 0.00 0.00 43.45 5.10
2445 2934 4.990257 ACAATCTTGGATGCAAATCTTCG 58.010 39.130 0.00 0.00 0.00 3.79
2446 2935 9.455847 GTATAACAATCTTGGATGCAAATCTTC 57.544 33.333 0.00 0.00 0.00 2.87
2447 2936 9.193806 AGTATAACAATCTTGGATGCAAATCTT 57.806 29.630 0.00 0.00 0.00 2.40
2449 2938 9.241317 CAAGTATAACAATCTTGGATGCAAATC 57.759 33.333 0.00 0.00 36.09 2.17
2452 2941 7.701539 ACAAGTATAACAATCTTGGATGCAA 57.298 32.000 0.00 0.00 41.64 4.08
2453 2942 7.011016 CGTACAAGTATAACAATCTTGGATGCA 59.989 37.037 8.59 0.00 41.64 3.96
2454 2943 7.011109 ACGTACAAGTATAACAATCTTGGATGC 59.989 37.037 8.04 0.00 40.60 3.91
2455 2944 8.328146 CACGTACAAGTATAACAATCTTGGATG 58.672 37.037 8.59 7.74 41.84 3.51
2456 2945 8.038944 ACACGTACAAGTATAACAATCTTGGAT 58.961 33.333 8.59 0.00 41.64 3.41
2457 2946 7.380536 ACACGTACAAGTATAACAATCTTGGA 58.619 34.615 8.59 0.00 41.64 3.53
2458 2947 7.591006 ACACGTACAAGTATAACAATCTTGG 57.409 36.000 8.59 0.00 41.64 3.61
2459 2948 8.705134 TCAACACGTACAAGTATAACAATCTTG 58.295 33.333 0.00 0.00 42.60 3.02
2460 2949 8.821147 TCAACACGTACAAGTATAACAATCTT 57.179 30.769 0.00 0.00 0.00 2.40
2461 2950 8.706035 GTTCAACACGTACAAGTATAACAATCT 58.294 33.333 0.00 0.00 0.00 2.40
2462 2951 7.953710 GGTTCAACACGTACAAGTATAACAATC 59.046 37.037 0.00 0.00 0.00 2.67
2463 2952 7.441760 TGGTTCAACACGTACAAGTATAACAAT 59.558 33.333 0.00 0.00 0.00 2.71
2464 2953 6.760298 TGGTTCAACACGTACAAGTATAACAA 59.240 34.615 0.00 0.00 0.00 2.83
2465 2954 6.279123 TGGTTCAACACGTACAAGTATAACA 58.721 36.000 0.00 0.00 0.00 2.41
2466 2955 6.768029 TGGTTCAACACGTACAAGTATAAC 57.232 37.500 0.00 0.00 0.00 1.89
2467 2956 7.153315 TCATGGTTCAACACGTACAAGTATAA 58.847 34.615 0.00 0.00 0.00 0.98
2468 2957 6.689554 TCATGGTTCAACACGTACAAGTATA 58.310 36.000 0.00 0.00 0.00 1.47
2469 2958 5.543714 TCATGGTTCAACACGTACAAGTAT 58.456 37.500 0.00 0.00 0.00 2.12
2470 2959 4.946445 TCATGGTTCAACACGTACAAGTA 58.054 39.130 0.00 0.00 0.00 2.24
2471 2960 3.799366 TCATGGTTCAACACGTACAAGT 58.201 40.909 0.00 0.00 0.00 3.16
2472 2961 4.804608 TTCATGGTTCAACACGTACAAG 57.195 40.909 0.00 0.00 0.00 3.16
2473 2962 4.636648 AGTTTCATGGTTCAACACGTACAA 59.363 37.500 0.00 0.00 0.00 2.41
2474 2963 4.193090 AGTTTCATGGTTCAACACGTACA 58.807 39.130 0.00 0.00 0.00 2.90
2475 2964 4.806342 AGTTTCATGGTTCAACACGTAC 57.194 40.909 0.00 0.00 0.00 3.67
2476 2965 6.238429 GGTTTAGTTTCATGGTTCAACACGTA 60.238 38.462 0.00 0.00 0.00 3.57
2477 2966 5.449451 GGTTTAGTTTCATGGTTCAACACGT 60.449 40.000 0.00 0.00 0.00 4.49
2478 2967 4.973663 GGTTTAGTTTCATGGTTCAACACG 59.026 41.667 0.00 0.00 0.00 4.49
2479 2968 6.144078 AGGTTTAGTTTCATGGTTCAACAC 57.856 37.500 0.00 0.00 0.00 3.32
2480 2969 6.783708 AAGGTTTAGTTTCATGGTTCAACA 57.216 33.333 0.00 0.00 0.00 3.33
2481 2970 6.416750 CGAAAGGTTTAGTTTCATGGTTCAAC 59.583 38.462 0.00 0.00 34.16 3.18
2482 2971 6.500041 CGAAAGGTTTAGTTTCATGGTTCAA 58.500 36.000 0.00 0.00 34.16 2.69
2483 2972 6.067263 CGAAAGGTTTAGTTTCATGGTTCA 57.933 37.500 0.00 0.00 34.16 3.18
2548 3037 9.816787 ACCCTTTCTAGAAAAATATACCAAACA 57.183 29.630 18.25 0.00 0.00 2.83
2551 3040 9.250246 CCAACCCTTTCTAGAAAAATATACCAA 57.750 33.333 18.25 0.00 0.00 3.67
2552 3041 7.837187 CCCAACCCTTTCTAGAAAAATATACCA 59.163 37.037 18.25 0.00 0.00 3.25
2553 3042 7.837689 ACCCAACCCTTTCTAGAAAAATATACC 59.162 37.037 18.25 0.00 0.00 2.73
2554 3043 8.818622 ACCCAACCCTTTCTAGAAAAATATAC 57.181 34.615 18.25 0.00 0.00 1.47
2557 3046 9.831682 AATAACCCAACCCTTTCTAGAAAAATA 57.168 29.630 18.25 0.00 0.00 1.40
2558 3047 8.736097 AATAACCCAACCCTTTCTAGAAAAAT 57.264 30.769 18.25 4.78 0.00 1.82
2559 3048 9.831682 ATAATAACCCAACCCTTTCTAGAAAAA 57.168 29.630 18.25 0.00 0.00 1.94
2560 3049 9.250246 CATAATAACCCAACCCTTTCTAGAAAA 57.750 33.333 18.25 0.79 0.00 2.29
2570 3059 5.400189 CCATTCCTCATAATAACCCAACCCT 60.400 44.000 0.00 0.00 0.00 4.34
2573 3062 6.833933 AGTTCCATTCCTCATAATAACCCAAC 59.166 38.462 0.00 0.00 0.00 3.77
2576 3065 7.290813 AGAAGTTCCATTCCTCATAATAACCC 58.709 38.462 0.00 0.00 0.00 4.11
2583 3072 5.441718 AGCAAGAAGTTCCATTCCTCATA 57.558 39.130 0.00 0.00 0.00 2.15
2584 3073 4.313020 AGCAAGAAGTTCCATTCCTCAT 57.687 40.909 0.00 0.00 0.00 2.90
2668 3157 6.325286 AGGGAGTATTTGACTATCAAGAGACC 59.675 42.308 0.00 0.00 39.06 3.85
2699 3188 5.869888 ACTAAGCTTGAGACAGTTATTTCGG 59.130 40.000 9.86 0.00 0.00 4.30
2700 3189 6.952935 ACTAAGCTTGAGACAGTTATTTCG 57.047 37.500 9.86 0.00 0.00 3.46
2701 3190 8.758633 TGTACTAAGCTTGAGACAGTTATTTC 57.241 34.615 9.86 0.00 0.00 2.17
2703 3192 8.368668 AGTTGTACTAAGCTTGAGACAGTTATT 58.631 33.333 9.86 0.00 0.00 1.40
2705 3194 7.286215 AGTTGTACTAAGCTTGAGACAGTTA 57.714 36.000 9.86 0.00 0.00 2.24
2708 3197 6.480320 ACAAAGTTGTACTAAGCTTGAGACAG 59.520 38.462 9.86 0.00 40.16 3.51
2709 3198 6.346096 ACAAAGTTGTACTAAGCTTGAGACA 58.654 36.000 9.86 7.12 40.16 3.41
2739 3228 9.216117 GGTCATATGTTCAACTTTGTACTAGTT 57.784 33.333 0.00 7.78 36.31 2.24
2740 3229 8.372459 TGGTCATATGTTCAACTTTGTACTAGT 58.628 33.333 0.00 0.00 30.87 2.57
2741 3230 8.656849 GTGGTCATATGTTCAACTTTGTACTAG 58.343 37.037 1.90 0.00 30.87 2.57
2742 3231 8.372459 AGTGGTCATATGTTCAACTTTGTACTA 58.628 33.333 1.90 0.00 30.87 1.82
2743 3232 7.224297 AGTGGTCATATGTTCAACTTTGTACT 58.776 34.615 1.90 0.00 30.87 2.73
2744 3233 7.435068 AGTGGTCATATGTTCAACTTTGTAC 57.565 36.000 1.90 0.00 0.00 2.90
2745 3234 7.604927 GGTAGTGGTCATATGTTCAACTTTGTA 59.395 37.037 13.00 0.00 0.00 2.41
2751 3240 6.183360 CCATTGGTAGTGGTCATATGTTCAAC 60.183 42.308 1.90 1.82 31.96 3.18
2769 3262 4.374689 TGGTACACATACAACCATTGGT 57.625 40.909 1.37 1.37 38.36 3.67
2771 3264 7.995289 ACATATTGGTACACATACAACCATTG 58.005 34.615 0.00 0.00 42.65 2.82
2846 3339 7.148171 GCAGAGACTAGCATTATTTTGGACTTT 60.148 37.037 0.00 0.00 0.00 2.66
2861 3354 5.299279 AGACTAGATTTCTGCAGAGACTAGC 59.701 44.000 30.88 26.08 32.14 3.42
2862 3355 6.942532 AGACTAGATTTCTGCAGAGACTAG 57.057 41.667 30.14 30.14 33.55 2.57
2901 3394 7.291411 ACTGTATATCCTACTTAACCAGCTG 57.709 40.000 6.78 6.78 0.00 4.24
2920 3413 6.096423 ACTGACTATGCCTCGAAATAACTGTA 59.904 38.462 0.00 0.00 0.00 2.74
2921 3414 5.105310 ACTGACTATGCCTCGAAATAACTGT 60.105 40.000 0.00 0.00 0.00 3.55
2926 3419 4.887655 TCTGACTGACTATGCCTCGAAATA 59.112 41.667 0.00 0.00 0.00 1.40
2934 3427 7.617041 AATTTTAGTTCTGACTGACTATGCC 57.383 36.000 0.00 0.00 36.60 4.40
2936 3429 9.003658 ACCAAATTTTAGTTCTGACTGACTATG 57.996 33.333 0.00 0.00 36.60 2.23
2940 3433 8.379457 AGTACCAAATTTTAGTTCTGACTGAC 57.621 34.615 0.00 0.00 36.60 3.51
2961 3454 7.391833 AGAAATTTGGTTCCATTCAGAGAGTAC 59.608 37.037 0.00 0.00 0.00 2.73
2969 3463 6.015180 CCAGAAGAGAAATTTGGTTCCATTCA 60.015 38.462 0.00 0.00 30.43 2.57
3037 3531 9.274096 TTTGCATCTTTACAAAAAGCCAAAGGC 62.274 37.037 0.00 0.00 41.64 4.35
3074 3569 3.244215 ACATCATCACGGTGTTTCTGAGT 60.244 43.478 8.17 5.48 0.00 3.41
3099 3594 2.887151 AGTCCAACAGATTTCCAGGG 57.113 50.000 0.00 0.00 0.00 4.45
3186 3684 4.642437 TGTGAACTAAAAACATGGAGTGCA 59.358 37.500 0.00 0.00 0.00 4.57
3187 3685 4.976116 GTGTGAACTAAAAACATGGAGTGC 59.024 41.667 0.00 0.00 0.00 4.40
3201 3700 2.455674 AAGCAGCGATGTGTGAACTA 57.544 45.000 1.22 0.00 0.00 2.24
3202 3701 2.069273 GTAAGCAGCGATGTGTGAACT 58.931 47.619 1.22 0.00 0.00 3.01
3213 3712 2.359900 AGGGAATTCTTGTAAGCAGCG 58.640 47.619 5.23 0.00 0.00 5.18
3214 3713 3.758554 TGAAGGGAATTCTTGTAAGCAGC 59.241 43.478 5.23 0.00 38.83 5.25
3215 3714 4.761739 TGTGAAGGGAATTCTTGTAAGCAG 59.238 41.667 5.23 0.00 38.83 4.24
3221 3720 5.598005 TGAAACATGTGAAGGGAATTCTTGT 59.402 36.000 0.00 0.00 38.83 3.16
3233 3732 5.635417 TGTTGACAGTTGAAACATGTGAA 57.365 34.783 0.00 0.00 0.00 3.18
3237 3736 4.209703 GCCAATGTTGACAGTTGAAACATG 59.790 41.667 14.18 0.00 42.24 3.21
3374 3873 8.861033 TTCATGAGAAAAGAAACACAATTCAG 57.139 30.769 0.00 0.00 0.00 3.02
3552 4051 2.827322 CAGGATCAAAATGAGTGGCCAA 59.173 45.455 7.24 0.00 0.00 4.52
3623 4122 3.268023 GCACCTAGCATTAGTTCAGGT 57.732 47.619 0.00 0.00 44.79 4.00
3728 4227 0.321653 ATGGACCAACCTCTGTTCGC 60.322 55.000 0.00 0.00 39.86 4.70
3785 4286 3.560068 ACAAGTTAGTCTCCAAGTTTGCG 59.440 43.478 0.00 0.00 0.00 4.85
3789 4290 4.141711 TGAGCACAAGTTAGTCTCCAAGTT 60.142 41.667 0.00 0.00 0.00 2.66
4084 4585 3.477530 AGCAGTGTTTCCAGTTAAGACC 58.522 45.455 0.00 0.00 0.00 3.85
4271 4776 6.449635 ACTGAATTCACAGCAAACAGTAAA 57.550 33.333 3.38 0.00 41.06 2.01
4344 4849 0.450184 CCATTTCTTTACACGGCGGG 59.550 55.000 8.04 8.04 0.00 6.13
4406 4911 7.824779 AGAATAGCAGAAATAAGTTCGAAAGGT 59.175 33.333 0.00 0.00 41.52 3.50
4435 4940 2.880268 TGTTGAAGCTTCTGGTGACATG 59.120 45.455 26.09 0.00 41.51 3.21
4436 4941 3.213206 TGTTGAAGCTTCTGGTGACAT 57.787 42.857 26.09 0.00 41.51 3.06
4494 4999 3.695022 CTGGCGTTCTACCGACCCG 62.695 68.421 0.00 0.00 34.00 5.28
4652 5157 4.332828 AGGCATAGTGGTAACTTCCAAAC 58.667 43.478 0.00 0.00 39.34 2.93
4654 5159 5.027460 TCTAGGCATAGTGGTAACTTCCAA 58.973 41.667 5.15 0.00 39.34 3.53
4660 5165 5.593679 TTCTGTCTAGGCATAGTGGTAAC 57.406 43.478 5.15 0.00 0.00 2.50
4694 5204 7.445402 TCAATTGAAGAGGAAACAAGAAGTAGG 59.555 37.037 5.45 0.00 0.00 3.18
4706 5216 5.514274 AAAAAGCGTCAATTGAAGAGGAA 57.486 34.783 23.23 0.00 0.00 3.36
4757 5267 9.476202 AAAAACATTTGCCTTTTAGTCATAGAC 57.524 29.630 0.00 0.00 0.00 2.59
4825 5335 4.177783 GAGGAAATCTCTCGAGTTTGGTC 58.822 47.826 13.13 6.03 39.38 4.02
4891 5401 1.153353 CGTTGGTTGTTACATCGGCT 58.847 50.000 0.00 0.00 0.00 5.52
4969 5479 4.072131 GGCTGTTCAGGTAAGATTTCACA 58.928 43.478 1.97 0.00 0.00 3.58
5067 5577 1.220749 GGATGGCCAAGCGAGTACA 59.779 57.895 10.96 0.00 0.00 2.90
5198 5708 7.120432 CAGGGGATGTAAGAAAAGAAGAAGAAG 59.880 40.741 0.00 0.00 0.00 2.85
5241 5773 6.074544 AGCCTATCAATCGTGTACTAAGAC 57.925 41.667 0.00 0.00 0.00 3.01
5247 5779 7.368833 ACAAGTATAGCCTATCAATCGTGTAC 58.631 38.462 0.00 0.00 0.00 2.90
5343 5875 3.181493 CCATTTCCAGTTATCTGCACTGC 60.181 47.826 0.00 0.00 40.43 4.40
5344 5876 4.012374 ACCATTTCCAGTTATCTGCACTG 58.988 43.478 0.00 0.00 41.29 3.66
5345 5877 4.018960 AGACCATTTCCAGTTATCTGCACT 60.019 41.667 0.00 0.00 40.09 4.40
5414 6027 6.426587 CCTCCTCTTCTGGGAATTTTTATCA 58.573 40.000 0.00 0.00 31.92 2.15
5435 6048 3.311966 GAAAACTGTTCATGCAAGCCTC 58.688 45.455 0.00 0.00 0.00 4.70
5455 6068 8.995027 AAAATGGATATGCATACTAGTTTGGA 57.005 30.769 10.41 12.06 0.00 3.53
5470 6083 7.178274 TGGTTAGTGTTGCAGAAAAATGGATAT 59.822 33.333 0.00 0.00 0.00 1.63
5533 6146 0.951040 GGTTTCGTGGAGCCTCAGTG 60.951 60.000 0.00 0.00 0.00 3.66
5538 6151 0.535102 CAACTGGTTTCGTGGAGCCT 60.535 55.000 0.00 0.00 0.00 4.58
5539 6152 1.949257 CAACTGGTTTCGTGGAGCC 59.051 57.895 0.00 0.00 0.00 4.70
5545 6158 2.420022 GCATATGAGCAACTGGTTTCGT 59.580 45.455 6.97 0.00 0.00 3.85
5604 6217 5.690816 TGATGCTTTGCGACGTTAATTTTA 58.309 33.333 0.00 0.00 0.00 1.52
5615 6228 0.811219 CCTCCGATGATGCTTTGCGA 60.811 55.000 0.00 0.00 0.00 5.10
5784 6409 2.297315 TCGTCTGTCACAGCAAGAGAAT 59.703 45.455 0.00 0.00 0.00 2.40
5887 6512 3.027412 TGCTACTCTGAATCCCTCTGAC 58.973 50.000 0.00 0.00 0.00 3.51
5892 6517 3.396685 ACTCTGCTACTCTGAATCCCT 57.603 47.619 0.00 0.00 0.00 4.20
5932 6557 3.376234 GCATCTCAGCAAACTCAGCATTA 59.624 43.478 0.00 0.00 0.00 1.90
5949 6574 3.227276 CCGGCGAGGTAGGCATCT 61.227 66.667 9.30 0.00 36.37 2.90
6007 6632 4.401022 TGACACTTTGAATCCTTGCAGAT 58.599 39.130 0.00 0.00 0.00 2.90
6032 6667 4.341806 ACAAGTTTCATTCAGGTGCATTCA 59.658 37.500 0.00 0.00 0.00 2.57
6033 6668 4.682860 CACAAGTTTCATTCAGGTGCATTC 59.317 41.667 0.00 0.00 0.00 2.67
6039 6674 4.261741 GCATCACACAAGTTTCATTCAGGT 60.262 41.667 0.00 0.00 0.00 4.00
6049 6684 1.971481 TGCTCTGCATCACACAAGTT 58.029 45.000 0.00 0.00 31.71 2.66
6080 6715 1.081174 TCCTTCCCCTTCTCCTGTCAT 59.919 52.381 0.00 0.00 0.00 3.06
6091 6726 4.663334 GTGTAATTTGTTCTCCTTCCCCT 58.337 43.478 0.00 0.00 0.00 4.79
6100 6735 4.212636 GTGCTACCACGTGTAATTTGTTCT 59.787 41.667 15.65 0.00 31.34 3.01
6112 6747 2.167398 ATTCGCCAGTGCTACCACGT 62.167 55.000 0.00 0.00 46.62 4.49
6116 6751 0.739813 ACGAATTCGCCAGTGCTACC 60.740 55.000 27.03 0.00 44.43 3.18



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.