Multiple sequence alignment - TraesCS3B01G468300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G468300 chr3B 100.000 3128 0 0 1 3128 712755966 712752839 0.000000e+00 5777.0
1 TraesCS3B01G468300 chr3D 89.842 2028 69 55 682 2640 537941661 537939702 0.000000e+00 2477.0
2 TraesCS3B01G468300 chr3D 79.887 532 51 28 1 502 537942304 537941799 3.860000e-89 339.0
3 TraesCS3B01G468300 chr3D 97.143 35 1 0 630 664 537941730 537941696 3.370000e-05 60.2
4 TraesCS3B01G468300 chr3D 100.000 28 0 0 2760 2787 10309500 10309473 6.000000e-03 52.8
5 TraesCS3B01G468300 chr3A 85.556 2077 113 58 630 2638 673478035 673476078 0.000000e+00 2001.0
6 TraesCS3B01G468300 chr3A 84.392 551 49 25 48 592 673478555 673478036 1.000000e-139 507.0
7 TraesCS3B01G468300 chr3A 98.507 67 1 0 2521 2587 673476187 673476121 5.480000e-23 119.0
8 TraesCS3B01G468300 chr4B 97.561 451 11 0 2678 3128 60071178 60070728 0.000000e+00 773.0
9 TraesCS3B01G468300 chr7B 99.716 352 1 0 2777 3128 593917640 593917289 0.000000e+00 645.0
10 TraesCS3B01G468300 chr7B 89.583 48 4 1 870 916 646245544 646245591 3.370000e-05 60.2
11 TraesCS3B01G468300 chr7B 85.185 54 6 2 2735 2787 724478400 724478452 2.000000e-03 54.7
12 TraesCS3B01G468300 chr7A 100.000 29 0 0 2759 2787 39037425 39037397 2.000000e-03 54.7
13 TraesCS3B01G468300 chr4A 100.000 29 0 0 2759 2787 36007117 36007089 2.000000e-03 54.7
14 TraesCS3B01G468300 chr2B 100.000 29 0 0 2759 2787 706375915 706375887 2.000000e-03 54.7
15 TraesCS3B01G468300 chr1A 100.000 29 0 0 2759 2787 562885287 562885259 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G468300 chr3B 712752839 712755966 3127 True 5777.000000 5777 100.000000 1 3128 1 chr3B.!!$R1 3127
1 TraesCS3B01G468300 chr3D 537939702 537942304 2602 True 958.733333 2477 88.957333 1 2640 3 chr3D.!!$R2 2639
2 TraesCS3B01G468300 chr3A 673476078 673478555 2477 True 875.666667 2001 89.485000 48 2638 3 chr3A.!!$R1 2590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
669 719 0.108041 GGTAATTCCCGGCGAGTGAA 60.108 55.0 9.3 8.77 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2157 2310 0.107165 GTACATTCAGTGAGGGGGCC 60.107 60.0 0.0 0.0 0.0 5.8 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.535226 GCCCCAACGTGTTTGAACTTC 60.535 52.381 0.00 0.00 37.39 3.01
95 103 2.769195 TAGGGCCCGGCGGTTATT 60.769 61.111 26.32 10.24 0.00 1.40
112 130 7.254852 GCGGTTATTTAATTGGAGTTGATTGA 58.745 34.615 0.00 0.00 0.00 2.57
123 141 0.455815 GTTGATTGATTCCACCGCCC 59.544 55.000 0.00 0.00 0.00 6.13
149 168 4.337274 CCGTCAAAAACTAAACTGGAAGGT 59.663 41.667 0.00 0.00 39.30 3.50
199 219 1.828660 CCCCAGCGTACTCCTCGAT 60.829 63.158 0.00 0.00 0.00 3.59
375 419 1.343821 CGCACGTTAACTGATCCGC 59.656 57.895 3.71 0.00 0.00 5.54
427 475 3.695606 GAGGCCTCGCACTGTGGA 61.696 66.667 19.06 4.53 32.77 4.02
430 478 2.646175 GGCCTCGCACTGTGGACTA 61.646 63.158 10.21 0.00 36.26 2.59
432 480 1.215647 CCTCGCACTGTGGACTACC 59.784 63.158 10.21 0.00 32.77 3.18
433 481 1.532604 CCTCGCACTGTGGACTACCA 61.533 60.000 10.21 0.00 44.76 3.25
490 539 4.314440 GACTGCCACCTCCGTGCA 62.314 66.667 0.00 0.00 38.79 4.57
586 636 4.422506 CAGCTGTTTAACTGCGCG 57.577 55.556 18.46 0.00 45.97 6.86
592 642 0.810426 TGTTTAACTGCGCGGTGACA 60.810 50.000 25.11 23.26 0.00 3.58
593 643 0.110823 GTTTAACTGCGCGGTGACAG 60.111 55.000 25.11 9.25 39.86 3.51
594 644 1.837538 TTTAACTGCGCGGTGACAGC 61.838 55.000 25.11 0.00 37.42 4.40
620 670 3.056328 GCCTTCCCGCTTCGCTTT 61.056 61.111 0.00 0.00 0.00 3.51
621 671 2.626780 GCCTTCCCGCTTCGCTTTT 61.627 57.895 0.00 0.00 0.00 2.27
622 672 1.210155 CCTTCCCGCTTCGCTTTTG 59.790 57.895 0.00 0.00 0.00 2.44
623 673 1.442688 CTTCCCGCTTCGCTTTTGC 60.443 57.895 0.00 0.00 43.23 3.68
624 674 1.856265 CTTCCCGCTTCGCTTTTGCT 61.856 55.000 0.00 0.00 44.80 3.91
625 675 1.852067 TTCCCGCTTCGCTTTTGCTC 61.852 55.000 0.00 0.00 44.80 4.26
626 676 2.176792 CCGCTTCGCTTTTGCTCC 59.823 61.111 0.00 0.00 44.80 4.70
627 677 2.328099 CCGCTTCGCTTTTGCTCCT 61.328 57.895 0.00 0.00 44.80 3.69
628 678 1.154338 CGCTTCGCTTTTGCTCCTG 60.154 57.895 0.00 0.00 44.80 3.86
669 719 0.108041 GGTAATTCCCGGCGAGTGAA 60.108 55.000 9.30 8.77 0.00 3.18
671 721 0.177141 TAATTCCCGGCGAGTGAAGG 59.823 55.000 9.30 0.00 0.00 3.46
672 722 1.838073 AATTCCCGGCGAGTGAAGGT 61.838 55.000 9.30 0.00 0.00 3.50
673 723 0.974010 ATTCCCGGCGAGTGAAGGTA 60.974 55.000 9.30 0.00 0.00 3.08
674 724 1.880819 TTCCCGGCGAGTGAAGGTAC 61.881 60.000 9.30 0.00 0.00 3.34
676 726 1.515954 CCGGCGAGTGAAGGTACAT 59.484 57.895 9.30 0.00 0.00 2.29
677 727 0.742505 CCGGCGAGTGAAGGTACATA 59.257 55.000 9.30 0.00 0.00 2.29
678 728 1.269102 CCGGCGAGTGAAGGTACATAG 60.269 57.143 9.30 0.00 0.00 2.23
679 729 1.854227 GGCGAGTGAAGGTACATAGC 58.146 55.000 0.00 0.00 0.00 2.97
680 730 1.538419 GGCGAGTGAAGGTACATAGCC 60.538 57.143 0.00 0.00 35.00 3.93
682 732 1.269102 CGAGTGAAGGTACATAGCCGG 60.269 57.143 0.00 0.00 0.00 6.13
683 733 1.068741 GAGTGAAGGTACATAGCCGGG 59.931 57.143 2.18 0.00 0.00 5.73
685 735 0.325860 TGAAGGTACATAGCCGGGGT 60.326 55.000 2.18 3.37 0.00 4.95
839 908 0.245539 TACGCCTCCCTTTCTCGTTG 59.754 55.000 0.00 0.00 34.97 4.10
955 1039 3.834799 CCGTCCGAGCCCAGGTAC 61.835 72.222 0.00 0.00 0.00 3.34
956 1040 3.066190 CGTCCGAGCCCAGGTACA 61.066 66.667 0.00 0.00 0.00 2.90
958 1042 2.363795 TCCGAGCCCAGGTACAGG 60.364 66.667 0.00 0.00 33.40 4.00
962 1046 3.372554 GAGCCCAGGTACAGGTCGC 62.373 68.421 0.00 0.00 30.68 5.19
964 1048 3.379445 CCCAGGTACAGGTCGCGT 61.379 66.667 5.77 0.00 30.68 6.01
965 1049 2.181021 CCAGGTACAGGTCGCGTC 59.819 66.667 5.77 0.00 0.00 5.19
966 1050 2.202440 CAGGTACAGGTCGCGTCG 60.202 66.667 5.77 0.00 0.00 5.12
967 1051 2.670934 AGGTACAGGTCGCGTCGT 60.671 61.111 5.77 0.00 0.00 4.34
968 1052 2.503375 GGTACAGGTCGCGTCGTG 60.503 66.667 21.20 21.20 0.00 4.35
969 1053 3.170585 GTACAGGTCGCGTCGTGC 61.171 66.667 22.38 8.67 41.47 5.34
970 1054 3.359523 TACAGGTCGCGTCGTGCT 61.360 61.111 22.38 13.62 43.27 4.40
971 1055 3.604494 TACAGGTCGCGTCGTGCTG 62.604 63.158 22.38 14.29 43.27 4.41
973 1057 4.280494 AGGTCGCGTCGTGCTGTT 62.280 61.111 5.77 0.00 43.27 3.16
974 1058 3.764049 GGTCGCGTCGTGCTGTTC 61.764 66.667 5.77 0.00 43.27 3.18
975 1059 4.104633 GTCGCGTCGTGCTGTTCG 62.105 66.667 5.77 0.00 43.27 3.95
976 1060 4.617486 TCGCGTCGTGCTGTTCGT 62.617 61.111 5.77 0.00 43.27 3.85
1038 1126 3.755628 CCGTCTTCTCCGCCCGAA 61.756 66.667 0.00 0.00 0.00 4.30
1224 1312 2.811317 GACGCCGAGCAAGACCAG 60.811 66.667 0.00 0.00 0.00 4.00
1227 1315 4.021925 GCCGAGCAAGACCAGGGT 62.022 66.667 0.00 0.00 0.00 4.34
1229 1317 2.583441 CCGAGCAAGACCAGGGTGA 61.583 63.158 0.00 0.00 0.00 4.02
1230 1318 1.371183 CGAGCAAGACCAGGGTGAA 59.629 57.895 0.00 0.00 0.00 3.18
1231 1319 0.671781 CGAGCAAGACCAGGGTGAAG 60.672 60.000 0.00 0.00 0.00 3.02
1232 1320 0.687354 GAGCAAGACCAGGGTGAAGA 59.313 55.000 0.00 0.00 0.00 2.87
1233 1321 1.072331 GAGCAAGACCAGGGTGAAGAA 59.928 52.381 0.00 0.00 0.00 2.52
1236 1324 0.402121 AAGACCAGGGTGAAGAAGGC 59.598 55.000 0.00 0.00 0.00 4.35
1239 1327 1.078848 CCAGGGTGAAGAAGGCGAG 60.079 63.158 0.00 0.00 0.00 5.03
1243 1331 1.671742 GGTGAAGAAGGCGAGGACA 59.328 57.895 0.00 0.00 0.00 4.02
1267 1355 4.402528 CCGATGCCGACCCCAACA 62.403 66.667 0.00 0.00 38.22 3.33
1404 1513 2.920912 ACCGGCGAGTCCAAGGAA 60.921 61.111 9.30 0.00 34.01 3.36
1522 1631 4.753662 ACTCTACCTCCGGCGCCA 62.754 66.667 28.98 6.80 0.00 5.69
1638 1750 2.359975 GGGCGCAAGGTTAGCAGT 60.360 61.111 10.83 0.00 38.28 4.40
1790 1902 2.969016 CGGTCAGAGCAGAGCAGT 59.031 61.111 0.00 0.00 35.83 4.40
1791 1903 1.445754 CGGTCAGAGCAGAGCAGTG 60.446 63.158 0.00 0.00 35.83 3.66
1863 1978 1.503542 GCGCAACAAGCTACAGCAT 59.496 52.632 0.30 0.00 45.16 3.79
2267 2427 5.470845 TCGCTAGCTTAAGCATTCTTTTC 57.529 39.130 28.39 8.01 42.91 2.29
2271 2431 5.588246 GCTAGCTTAAGCATTCTTTTCCTCT 59.412 40.000 28.39 6.26 45.16 3.69
2273 2433 7.281100 GCTAGCTTAAGCATTCTTTTCCTCTTA 59.719 37.037 28.39 6.67 45.16 2.10
2338 2498 1.881903 CTCAAGCTGCCGTCCTCTCA 61.882 60.000 0.00 0.00 0.00 3.27
2355 2515 3.599343 TCTCAATCATGAACCGTCCAAG 58.401 45.455 0.00 0.00 34.49 3.61
2362 2522 1.890876 TGAACCGTCCAAGTCAATGG 58.109 50.000 0.00 0.00 42.12 3.16
2377 2537 2.843730 TCAATGGCCATGTACCACTAGT 59.156 45.455 21.63 0.00 40.82 2.57
2381 2541 3.446968 TGGCCATGTACCACTAGTTAGT 58.553 45.455 0.00 0.00 36.90 2.24
2429 2591 1.922135 AAACCATCGATGTGGCGTGC 61.922 55.000 23.27 0.00 43.27 5.34
2441 2603 1.308783 TGGCGTGCAACACAAACTCA 61.309 50.000 0.00 0.00 35.74 3.41
2443 2605 0.865639 GCGTGCAACACAAACTCACC 60.866 55.000 0.00 0.00 35.74 4.02
2455 2617 1.779061 AACTCACCGGTCCCTTGCAT 61.779 55.000 2.59 0.00 0.00 3.96
2478 2640 1.211949 CGAGACATGGGTTAATGGGGT 59.788 52.381 0.00 0.00 31.46 4.95
2479 2641 2.356741 CGAGACATGGGTTAATGGGGTT 60.357 50.000 0.00 0.00 31.46 4.11
2480 2642 3.023832 GAGACATGGGTTAATGGGGTTG 58.976 50.000 0.00 0.00 31.46 3.77
2486 2648 0.611200 GGTTAATGGGGTTGGTTGGC 59.389 55.000 0.00 0.00 0.00 4.52
2493 2655 1.903404 GGGTTGGTTGGCTGAGTGG 60.903 63.158 0.00 0.00 0.00 4.00
2494 2656 1.903404 GGTTGGTTGGCTGAGTGGG 60.903 63.158 0.00 0.00 0.00 4.61
2495 2657 1.903404 GTTGGTTGGCTGAGTGGGG 60.903 63.158 0.00 0.00 0.00 4.96
2496 2658 2.081787 TTGGTTGGCTGAGTGGGGA 61.082 57.895 0.00 0.00 0.00 4.81
2497 2659 2.067932 TTGGTTGGCTGAGTGGGGAG 62.068 60.000 0.00 0.00 0.00 4.30
2498 2660 2.352805 GTTGGCTGAGTGGGGAGG 59.647 66.667 0.00 0.00 0.00 4.30
2499 2661 2.935481 TTGGCTGAGTGGGGAGGG 60.935 66.667 0.00 0.00 0.00 4.30
2500 2662 3.810687 TTGGCTGAGTGGGGAGGGT 62.811 63.158 0.00 0.00 0.00 4.34
2501 2663 3.721706 GGCTGAGTGGGGAGGGTG 61.722 72.222 0.00 0.00 0.00 4.61
2502 2664 2.607750 GCTGAGTGGGGAGGGTGA 60.608 66.667 0.00 0.00 0.00 4.02
2503 2665 1.997874 GCTGAGTGGGGAGGGTGAT 60.998 63.158 0.00 0.00 0.00 3.06
2504 2666 1.910722 CTGAGTGGGGAGGGTGATG 59.089 63.158 0.00 0.00 0.00 3.07
2505 2667 1.616327 TGAGTGGGGAGGGTGATGG 60.616 63.158 0.00 0.00 0.00 3.51
2506 2668 2.286425 AGTGGGGAGGGTGATGGG 60.286 66.667 0.00 0.00 0.00 4.00
2507 2669 3.420482 GTGGGGAGGGTGATGGGG 61.420 72.222 0.00 0.00 0.00 4.96
2511 2673 3.813724 GGAGGGTGATGGGGCCAG 61.814 72.222 4.39 0.00 0.00 4.85
2512 2674 2.692368 GAGGGTGATGGGGCCAGA 60.692 66.667 4.39 0.00 0.00 3.86
2513 2675 2.693864 AGGGTGATGGGGCCAGAG 60.694 66.667 4.39 0.00 0.00 3.35
2514 2676 2.692368 GGGTGATGGGGCCAGAGA 60.692 66.667 4.39 0.00 0.00 3.10
2515 2677 2.081161 GGGTGATGGGGCCAGAGAT 61.081 63.158 4.39 0.00 0.00 2.75
2516 2678 1.649271 GGGTGATGGGGCCAGAGATT 61.649 60.000 4.39 0.00 0.00 2.40
2517 2679 1.140312 GGTGATGGGGCCAGAGATTA 58.860 55.000 4.39 0.00 0.00 1.75
2518 2680 1.072965 GGTGATGGGGCCAGAGATTAG 59.927 57.143 4.39 0.00 0.00 1.73
2519 2681 2.050144 GTGATGGGGCCAGAGATTAGA 58.950 52.381 4.39 0.00 0.00 2.10
2634 2797 0.314302 AACCGGATCGACGATGGATC 59.686 55.000 16.49 0.81 39.63 3.36
2644 2807 4.900154 GATGGATCGATCGGGAGC 57.100 61.111 18.81 5.55 0.00 4.70
2645 2808 2.271940 GATGGATCGATCGGGAGCT 58.728 57.895 18.81 0.00 0.00 4.09
2646 2809 0.172352 GATGGATCGATCGGGAGCTC 59.828 60.000 18.81 4.71 0.00 4.09
2647 2810 0.251564 ATGGATCGATCGGGAGCTCT 60.252 55.000 18.81 0.00 0.00 4.09
2648 2811 1.175347 TGGATCGATCGGGAGCTCTG 61.175 60.000 18.81 6.93 0.00 3.35
2649 2812 1.583986 GATCGATCGGGAGCTCTGG 59.416 63.158 16.41 5.94 0.00 3.86
2650 2813 1.872197 GATCGATCGGGAGCTCTGGG 61.872 65.000 16.41 3.27 0.00 4.45
2651 2814 4.292178 CGATCGGGAGCTCTGGGC 62.292 72.222 14.64 0.00 42.19 5.36
2685 2848 3.868835 CGGGCTACGCAACATAAATAAC 58.131 45.455 0.00 0.00 34.82 1.89
2686 2849 3.310227 CGGGCTACGCAACATAAATAACA 59.690 43.478 0.00 0.00 34.82 2.41
2687 2850 4.594136 GGGCTACGCAACATAAATAACAC 58.406 43.478 0.00 0.00 0.00 3.32
2688 2851 4.496840 GGGCTACGCAACATAAATAACACC 60.497 45.833 0.00 0.00 0.00 4.16
2689 2852 4.095185 GGCTACGCAACATAAATAACACCA 59.905 41.667 0.00 0.00 0.00 4.17
2690 2853 5.220970 GGCTACGCAACATAAATAACACCAT 60.221 40.000 0.00 0.00 0.00 3.55
2691 2854 6.262601 GCTACGCAACATAAATAACACCATT 58.737 36.000 0.00 0.00 0.00 3.16
2692 2855 6.413818 GCTACGCAACATAAATAACACCATTC 59.586 38.462 0.00 0.00 0.00 2.67
2693 2856 6.509418 ACGCAACATAAATAACACCATTCT 57.491 33.333 0.00 0.00 0.00 2.40
2694 2857 6.919721 ACGCAACATAAATAACACCATTCTT 58.080 32.000 0.00 0.00 0.00 2.52
2695 2858 6.806249 ACGCAACATAAATAACACCATTCTTG 59.194 34.615 0.00 0.00 0.00 3.02
2696 2859 6.806249 CGCAACATAAATAACACCATTCTTGT 59.194 34.615 0.00 0.00 0.00 3.16
2697 2860 7.328249 CGCAACATAAATAACACCATTCTTGTT 59.672 33.333 0.00 0.00 40.34 2.83
2698 2861 8.987890 GCAACATAAATAACACCATTCTTGTTT 58.012 29.630 0.00 0.00 38.21 2.83
2705 2868 8.831715 AATAACACCATTCTTGTTTTGATTCC 57.168 30.769 0.00 0.00 38.21 3.01
2706 2869 6.484364 AACACCATTCTTGTTTTGATTCCT 57.516 33.333 0.00 0.00 33.23 3.36
2707 2870 7.595819 AACACCATTCTTGTTTTGATTCCTA 57.404 32.000 0.00 0.00 33.23 2.94
2708 2871 7.595819 ACACCATTCTTGTTTTGATTCCTAA 57.404 32.000 0.00 0.00 0.00 2.69
2709 2872 7.661040 ACACCATTCTTGTTTTGATTCCTAAG 58.339 34.615 0.00 0.00 0.00 2.18
2710 2873 7.092716 CACCATTCTTGTTTTGATTCCTAAGG 58.907 38.462 0.00 0.00 0.00 2.69
2711 2874 6.782494 ACCATTCTTGTTTTGATTCCTAAGGT 59.218 34.615 0.00 0.00 0.00 3.50
2712 2875 7.947890 ACCATTCTTGTTTTGATTCCTAAGGTA 59.052 33.333 0.00 0.00 0.00 3.08
2713 2876 8.802267 CCATTCTTGTTTTGATTCCTAAGGTAA 58.198 33.333 0.00 0.00 0.00 2.85
2718 2881 9.639601 CTTGTTTTGATTCCTAAGGTAAAATCC 57.360 33.333 0.00 0.00 0.00 3.01
2719 2882 8.129496 TGTTTTGATTCCTAAGGTAAAATCCC 57.871 34.615 0.00 0.00 0.00 3.85
2720 2883 7.179516 TGTTTTGATTCCTAAGGTAAAATCCCC 59.820 37.037 0.00 0.00 0.00 4.81
2721 2884 6.410222 TTGATTCCTAAGGTAAAATCCCCA 57.590 37.500 0.00 0.00 0.00 4.96
2722 2885 5.762279 TGATTCCTAAGGTAAAATCCCCAC 58.238 41.667 0.00 0.00 0.00 4.61
2723 2886 5.254267 TGATTCCTAAGGTAAAATCCCCACA 59.746 40.000 0.00 0.00 0.00 4.17
2724 2887 5.602291 TTCCTAAGGTAAAATCCCCACAA 57.398 39.130 0.00 0.00 0.00 3.33
2725 2888 5.187621 TCCTAAGGTAAAATCCCCACAAG 57.812 43.478 0.00 0.00 0.00 3.16
2726 2889 4.853276 TCCTAAGGTAAAATCCCCACAAGA 59.147 41.667 0.00 0.00 0.00 3.02
2727 2890 5.494706 TCCTAAGGTAAAATCCCCACAAGAT 59.505 40.000 0.00 0.00 0.00 2.40
2728 2891 6.679303 TCCTAAGGTAAAATCCCCACAAGATA 59.321 38.462 0.00 0.00 0.00 1.98
2729 2892 7.352522 TCCTAAGGTAAAATCCCCACAAGATAT 59.647 37.037 0.00 0.00 0.00 1.63
2730 2893 8.665906 CCTAAGGTAAAATCCCCACAAGATATA 58.334 37.037 0.00 0.00 0.00 0.86
2732 2895 8.762481 AAGGTAAAATCCCCACAAGATATAAC 57.238 34.615 0.00 0.00 0.00 1.89
2733 2896 7.295340 AGGTAAAATCCCCACAAGATATAACC 58.705 38.462 0.00 0.00 0.00 2.85
2734 2897 6.492429 GGTAAAATCCCCACAAGATATAACCC 59.508 42.308 0.00 0.00 0.00 4.11
2735 2898 5.742562 AAATCCCCACAAGATATAACCCA 57.257 39.130 0.00 0.00 0.00 4.51
2736 2899 5.742562 AATCCCCACAAGATATAACCCAA 57.257 39.130 0.00 0.00 0.00 4.12
2737 2900 5.948481 ATCCCCACAAGATATAACCCAAT 57.052 39.130 0.00 0.00 0.00 3.16
2738 2901 5.742562 TCCCCACAAGATATAACCCAATT 57.257 39.130 0.00 0.00 0.00 2.32
2739 2902 6.098716 TCCCCACAAGATATAACCCAATTT 57.901 37.500 0.00 0.00 0.00 1.82
2740 2903 7.227355 TCCCCACAAGATATAACCCAATTTA 57.773 36.000 0.00 0.00 0.00 1.40
2741 2904 7.294584 TCCCCACAAGATATAACCCAATTTAG 58.705 38.462 0.00 0.00 0.00 1.85
2742 2905 7.129660 TCCCCACAAGATATAACCCAATTTAGA 59.870 37.037 0.00 0.00 0.00 2.10
2743 2906 7.230712 CCCCACAAGATATAACCCAATTTAGAC 59.769 40.741 0.00 0.00 0.00 2.59
2744 2907 7.230712 CCCACAAGATATAACCCAATTTAGACC 59.769 40.741 0.00 0.00 0.00 3.85
2745 2908 7.230712 CCACAAGATATAACCCAATTTAGACCC 59.769 40.741 0.00 0.00 0.00 4.46
2746 2909 7.777910 CACAAGATATAACCCAATTTAGACCCA 59.222 37.037 0.00 0.00 0.00 4.51
2747 2910 8.511126 ACAAGATATAACCCAATTTAGACCCAT 58.489 33.333 0.00 0.00 0.00 4.00
2756 2919 8.884124 ACCCAATTTAGACCCATATCATTATG 57.116 34.615 0.00 0.00 35.87 1.90
2757 2920 7.397192 ACCCAATTTAGACCCATATCATTATGC 59.603 37.037 0.00 0.00 34.94 3.14
2758 2921 7.396907 CCCAATTTAGACCCATATCATTATGCA 59.603 37.037 0.00 0.00 34.94 3.96
2759 2922 8.805175 CCAATTTAGACCCATATCATTATGCAA 58.195 33.333 0.00 0.00 34.94 4.08
2762 2925 8.938801 TTTAGACCCATATCATTATGCAATGT 57.061 30.769 0.00 0.00 41.96 2.71
2763 2926 8.565896 TTAGACCCATATCATTATGCAATGTC 57.434 34.615 0.00 0.00 41.96 3.06
2764 2927 6.787170 AGACCCATATCATTATGCAATGTCT 58.213 36.000 0.00 0.00 41.96 3.41
2765 2928 7.236529 AGACCCATATCATTATGCAATGTCTT 58.763 34.615 0.00 0.00 41.96 3.01
2766 2929 7.176165 AGACCCATATCATTATGCAATGTCTTG 59.824 37.037 0.00 0.00 41.96 3.02
2767 2930 6.779049 ACCCATATCATTATGCAATGTCTTGT 59.221 34.615 0.00 0.00 41.96 3.16
2768 2931 7.944000 ACCCATATCATTATGCAATGTCTTGTA 59.056 33.333 0.00 0.00 41.96 2.41
2769 2932 8.239314 CCCATATCATTATGCAATGTCTTGTAC 58.761 37.037 0.00 0.00 41.96 2.90
2770 2933 8.785946 CCATATCATTATGCAATGTCTTGTACA 58.214 33.333 0.00 0.00 41.96 2.90
2773 2936 7.920160 TCATTATGCAATGTCTTGTACAAGA 57.080 32.000 30.07 30.07 42.70 3.02
2784 2947 5.250235 TCTTGTACAAGATAGCCTCGAAG 57.750 43.478 30.07 5.20 42.06 3.79
2785 2948 4.098044 TCTTGTACAAGATAGCCTCGAAGG 59.902 45.833 30.07 4.96 42.06 3.46
2786 2949 3.362706 TGTACAAGATAGCCTCGAAGGT 58.637 45.455 0.00 0.00 37.80 3.50
2787 2950 2.969628 ACAAGATAGCCTCGAAGGTG 57.030 50.000 0.00 0.00 37.80 4.00
2788 2951 2.180276 ACAAGATAGCCTCGAAGGTGT 58.820 47.619 0.00 0.00 37.80 4.16
2789 2952 2.567615 ACAAGATAGCCTCGAAGGTGTT 59.432 45.455 0.00 0.00 37.80 3.32
2790 2953 2.932614 CAAGATAGCCTCGAAGGTGTTG 59.067 50.000 0.00 0.00 37.80 3.33
2791 2954 1.482593 AGATAGCCTCGAAGGTGTTGG 59.517 52.381 0.00 0.00 37.80 3.77
2792 2955 0.107654 ATAGCCTCGAAGGTGTTGGC 60.108 55.000 1.53 1.53 43.52 4.52
2793 2956 1.476845 TAGCCTCGAAGGTGTTGGCA 61.477 55.000 11.62 0.00 45.42 4.92
2794 2957 2.617274 GCCTCGAAGGTGTTGGCAC 61.617 63.158 4.83 0.00 42.79 5.01
2795 2958 1.071471 CCTCGAAGGTGTTGGCACT 59.929 57.895 0.00 0.00 44.65 4.40
2796 2959 0.535102 CCTCGAAGGTGTTGGCACTT 60.535 55.000 0.00 0.00 44.65 3.16
2797 2960 0.868406 CTCGAAGGTGTTGGCACTTC 59.132 55.000 5.71 5.71 44.65 3.01
2798 2961 0.878523 TCGAAGGTGTTGGCACTTCG 60.879 55.000 23.92 23.92 45.79 3.79
2799 2962 1.157870 CGAAGGTGTTGGCACTTCGT 61.158 55.000 22.45 1.70 43.16 3.85
2800 2963 1.021968 GAAGGTGTTGGCACTTCGTT 58.978 50.000 0.54 0.00 44.65 3.85
2801 2964 1.404035 GAAGGTGTTGGCACTTCGTTT 59.596 47.619 0.54 0.00 44.65 3.60
2802 2965 0.738389 AGGTGTTGGCACTTCGTTTG 59.262 50.000 0.00 0.00 44.65 2.93
2803 2966 0.869880 GGTGTTGGCACTTCGTTTGC 60.870 55.000 0.00 0.00 44.65 3.68
2804 2967 1.063327 TGTTGGCACTTCGTTTGCG 59.937 52.632 0.00 0.00 41.18 4.85
2805 2968 2.025441 TTGGCACTTCGTTTGCGC 59.975 55.556 0.00 0.00 41.18 6.09
2806 2969 3.477224 TTGGCACTTCGTTTGCGCC 62.477 57.895 4.18 0.00 41.18 6.53
2807 2970 4.700365 GGCACTTCGTTTGCGCCC 62.700 66.667 4.18 0.00 41.18 6.13
2808 2971 3.660111 GCACTTCGTTTGCGCCCT 61.660 61.111 4.18 0.00 38.14 5.19
2809 2972 2.252260 CACTTCGTTTGCGCCCTG 59.748 61.111 4.18 0.00 38.14 4.45
2810 2973 2.110213 ACTTCGTTTGCGCCCTGA 59.890 55.556 4.18 0.00 38.14 3.86
2811 2974 1.961277 ACTTCGTTTGCGCCCTGAG 60.961 57.895 4.18 0.00 38.14 3.35
2812 2975 3.314388 CTTCGTTTGCGCCCTGAGC 62.314 63.158 4.18 0.00 38.14 4.26
2813 2976 3.825160 TTCGTTTGCGCCCTGAGCT 62.825 57.895 4.18 0.00 40.39 4.09
2814 2977 3.357079 CGTTTGCGCCCTGAGCTT 61.357 61.111 4.18 0.00 40.39 3.74
2815 2978 2.256461 GTTTGCGCCCTGAGCTTG 59.744 61.111 4.18 0.00 40.39 4.01
2816 2979 2.112928 TTTGCGCCCTGAGCTTGA 59.887 55.556 4.18 0.00 40.39 3.02
2817 2980 1.968017 TTTGCGCCCTGAGCTTGAG 60.968 57.895 4.18 0.00 40.39 3.02
2818 2981 3.907260 TTGCGCCCTGAGCTTGAGG 62.907 63.158 4.18 5.86 40.39 3.86
2819 2982 4.400961 GCGCCCTGAGCTTGAGGT 62.401 66.667 10.91 0.00 40.39 3.85
2820 2983 3.019003 GCGCCCTGAGCTTGAGGTA 62.019 63.158 10.91 0.00 40.39 3.08
2821 2984 1.596934 CGCCCTGAGCTTGAGGTAA 59.403 57.895 10.91 0.00 40.39 2.85
2822 2985 0.179000 CGCCCTGAGCTTGAGGTAAT 59.821 55.000 10.91 0.00 40.39 1.89
2823 2986 1.407437 CGCCCTGAGCTTGAGGTAATT 60.407 52.381 10.91 0.00 40.39 1.40
2824 2987 2.158957 CGCCCTGAGCTTGAGGTAATTA 60.159 50.000 10.91 0.00 40.39 1.40
2825 2988 3.495100 CGCCCTGAGCTTGAGGTAATTAT 60.495 47.826 10.91 0.00 40.39 1.28
2826 2989 4.464947 GCCCTGAGCTTGAGGTAATTATT 58.535 43.478 10.91 0.00 38.99 1.40
2827 2990 4.889995 GCCCTGAGCTTGAGGTAATTATTT 59.110 41.667 10.91 0.00 38.99 1.40
2828 2991 5.009110 GCCCTGAGCTTGAGGTAATTATTTC 59.991 44.000 10.91 0.00 38.99 2.17
2829 2992 6.122277 CCCTGAGCTTGAGGTAATTATTTCA 58.878 40.000 10.91 0.00 0.00 2.69
2830 2993 6.261826 CCCTGAGCTTGAGGTAATTATTTCAG 59.738 42.308 10.91 0.00 0.00 3.02
2831 2994 7.050377 CCTGAGCTTGAGGTAATTATTTCAGA 58.950 38.462 4.83 0.00 32.25 3.27
2832 2995 7.554118 CCTGAGCTTGAGGTAATTATTTCAGAA 59.446 37.037 4.83 0.00 32.25 3.02
2833 2996 8.498054 TGAGCTTGAGGTAATTATTTCAGAAG 57.502 34.615 0.00 0.00 0.00 2.85
2834 2997 8.321353 TGAGCTTGAGGTAATTATTTCAGAAGA 58.679 33.333 0.00 0.00 0.00 2.87
2835 2998 8.729805 AGCTTGAGGTAATTATTTCAGAAGAG 57.270 34.615 0.00 0.00 0.00 2.85
2836 2999 7.281999 AGCTTGAGGTAATTATTTCAGAAGAGC 59.718 37.037 11.67 11.67 0.00 4.09
2837 3000 7.066284 GCTTGAGGTAATTATTTCAGAAGAGCA 59.934 37.037 13.30 0.00 0.00 4.26
2838 3001 8.862325 TTGAGGTAATTATTTCAGAAGAGCAA 57.138 30.769 0.00 0.00 0.00 3.91
2839 3002 8.862325 TGAGGTAATTATTTCAGAAGAGCAAA 57.138 30.769 0.00 0.00 0.00 3.68
2840 3003 8.950210 TGAGGTAATTATTTCAGAAGAGCAAAG 58.050 33.333 0.00 0.00 0.00 2.77
2841 3004 8.870075 AGGTAATTATTTCAGAAGAGCAAAGT 57.130 30.769 0.00 0.00 0.00 2.66
2842 3005 8.734386 AGGTAATTATTTCAGAAGAGCAAAGTG 58.266 33.333 0.00 0.00 0.00 3.16
2843 3006 7.486232 GGTAATTATTTCAGAAGAGCAAAGTGC 59.514 37.037 0.00 0.00 45.46 4.40
2853 3016 3.785038 GCAAAGTGCTTTTGTTGCG 57.215 47.368 13.33 0.00 46.35 4.85
2854 3017 0.301388 GCAAAGTGCTTTTGTTGCGG 59.699 50.000 13.33 0.00 46.35 5.69
2855 3018 0.929615 CAAAGTGCTTTTGTTGCGGG 59.070 50.000 6.22 0.00 41.02 6.13
2856 3019 0.820871 AAAGTGCTTTTGTTGCGGGA 59.179 45.000 0.00 0.00 0.00 5.14
2857 3020 0.102300 AAGTGCTTTTGTTGCGGGAC 59.898 50.000 0.00 0.00 0.00 4.46
2871 3034 3.364277 GGGACGGCTCATAACAGAC 57.636 57.895 0.00 0.00 0.00 3.51
2872 3035 0.535335 GGGACGGCTCATAACAGACA 59.465 55.000 0.00 0.00 0.00 3.41
2873 3036 1.066430 GGGACGGCTCATAACAGACAA 60.066 52.381 0.00 0.00 0.00 3.18
2874 3037 2.420129 GGGACGGCTCATAACAGACAAT 60.420 50.000 0.00 0.00 0.00 2.71
2875 3038 2.609459 GGACGGCTCATAACAGACAATG 59.391 50.000 0.00 0.00 0.00 2.82
2876 3039 3.262420 GACGGCTCATAACAGACAATGT 58.738 45.455 0.00 0.00 46.97 2.71
2877 3040 3.262420 ACGGCTCATAACAGACAATGTC 58.738 45.455 5.02 5.02 43.00 3.06
2878 3041 2.609459 CGGCTCATAACAGACAATGTCC 59.391 50.000 10.12 0.00 43.00 4.02
2879 3042 3.679917 CGGCTCATAACAGACAATGTCCT 60.680 47.826 10.12 0.00 43.00 3.85
2880 3043 4.265073 GGCTCATAACAGACAATGTCCTT 58.735 43.478 10.12 4.57 43.00 3.36
2881 3044 5.428253 GGCTCATAACAGACAATGTCCTTA 58.572 41.667 10.12 6.67 43.00 2.69
2882 3045 5.294552 GGCTCATAACAGACAATGTCCTTAC 59.705 44.000 10.12 0.00 43.00 2.34
2883 3046 6.109359 GCTCATAACAGACAATGTCCTTACT 58.891 40.000 10.12 0.00 43.00 2.24
2884 3047 6.036517 GCTCATAACAGACAATGTCCTTACTG 59.963 42.308 10.12 3.94 43.00 2.74
2885 3048 5.874810 TCATAACAGACAATGTCCTTACTGC 59.125 40.000 10.12 0.00 43.00 4.40
2886 3049 3.059352 ACAGACAATGTCCTTACTGCC 57.941 47.619 10.12 0.00 37.75 4.85
2887 3050 2.639839 ACAGACAATGTCCTTACTGCCT 59.360 45.455 10.12 0.00 37.75 4.75
2888 3051 3.838317 ACAGACAATGTCCTTACTGCCTA 59.162 43.478 10.12 0.00 37.75 3.93
2889 3052 4.184629 CAGACAATGTCCTTACTGCCTAC 58.815 47.826 10.12 0.00 32.18 3.18
2890 3053 3.119101 AGACAATGTCCTTACTGCCTACG 60.119 47.826 10.12 0.00 32.18 3.51
2891 3054 2.829720 ACAATGTCCTTACTGCCTACGA 59.170 45.455 0.00 0.00 0.00 3.43
2892 3055 3.119101 ACAATGTCCTTACTGCCTACGAG 60.119 47.826 0.00 0.00 0.00 4.18
2893 3056 2.211250 TGTCCTTACTGCCTACGAGT 57.789 50.000 0.00 0.00 0.00 4.18
2894 3057 1.816835 TGTCCTTACTGCCTACGAGTG 59.183 52.381 0.00 0.00 0.00 3.51
2895 3058 1.817447 GTCCTTACTGCCTACGAGTGT 59.183 52.381 0.00 0.00 0.00 3.55
2896 3059 3.012518 GTCCTTACTGCCTACGAGTGTA 58.987 50.000 0.00 0.00 0.00 2.90
2897 3060 3.012518 TCCTTACTGCCTACGAGTGTAC 58.987 50.000 0.00 0.00 0.00 2.90
2898 3061 2.751259 CCTTACTGCCTACGAGTGTACA 59.249 50.000 0.00 0.00 0.00 2.90
2899 3062 3.427233 CCTTACTGCCTACGAGTGTACAC 60.427 52.174 18.56 18.56 0.00 2.90
2900 3063 1.612676 ACTGCCTACGAGTGTACACA 58.387 50.000 27.06 6.18 0.00 3.72
2901 3064 2.168496 ACTGCCTACGAGTGTACACAT 58.832 47.619 27.06 14.54 0.00 3.21
2902 3065 2.561419 ACTGCCTACGAGTGTACACATT 59.439 45.455 27.06 13.10 0.00 2.71
2903 3066 3.760151 ACTGCCTACGAGTGTACACATTA 59.240 43.478 27.06 13.51 0.00 1.90
2904 3067 4.401519 ACTGCCTACGAGTGTACACATTAT 59.598 41.667 27.06 12.16 0.00 1.28
2905 3068 4.928601 TGCCTACGAGTGTACACATTATC 58.071 43.478 27.06 14.73 0.00 1.75
2906 3069 4.643334 TGCCTACGAGTGTACACATTATCT 59.357 41.667 27.06 5.81 0.00 1.98
2907 3070 4.976731 GCCTACGAGTGTACACATTATCTG 59.023 45.833 27.06 13.68 0.00 2.90
2908 3071 5.220989 GCCTACGAGTGTACACATTATCTGA 60.221 44.000 27.06 6.23 0.00 3.27
2909 3072 6.679638 GCCTACGAGTGTACACATTATCTGAA 60.680 42.308 27.06 4.26 0.00 3.02
2910 3073 7.255569 CCTACGAGTGTACACATTATCTGAAA 58.744 38.462 27.06 1.55 0.00 2.69
2911 3074 7.758076 CCTACGAGTGTACACATTATCTGAAAA 59.242 37.037 27.06 0.27 0.00 2.29
2912 3075 7.582435 ACGAGTGTACACATTATCTGAAAAG 57.418 36.000 27.06 5.50 0.00 2.27
2913 3076 6.590292 ACGAGTGTACACATTATCTGAAAAGG 59.410 38.462 27.06 4.87 0.00 3.11
2914 3077 6.811665 CGAGTGTACACATTATCTGAAAAGGA 59.188 38.462 27.06 0.00 0.00 3.36
2915 3078 7.330946 CGAGTGTACACATTATCTGAAAAGGAA 59.669 37.037 27.06 0.00 0.00 3.36
2916 3079 8.553459 AGTGTACACATTATCTGAAAAGGAAG 57.447 34.615 27.06 0.00 0.00 3.46
2917 3080 8.375506 AGTGTACACATTATCTGAAAAGGAAGA 58.624 33.333 27.06 0.00 0.00 2.87
2918 3081 8.999431 GTGTACACATTATCTGAAAAGGAAGAA 58.001 33.333 21.14 0.00 0.00 2.52
2919 3082 9.567776 TGTACACATTATCTGAAAAGGAAGAAA 57.432 29.630 0.00 0.00 0.00 2.52
2921 3084 8.115490 ACACATTATCTGAAAAGGAAGAAAGG 57.885 34.615 0.00 0.00 0.00 3.11
2922 3085 7.725844 ACACATTATCTGAAAAGGAAGAAAGGT 59.274 33.333 0.00 0.00 0.00 3.50
2923 3086 9.231297 CACATTATCTGAAAAGGAAGAAAGGTA 57.769 33.333 0.00 0.00 0.00 3.08
2924 3087 9.807921 ACATTATCTGAAAAGGAAGAAAGGTAA 57.192 29.630 0.00 0.00 0.00 2.85
2927 3090 6.635030 TCTGAAAAGGAAGAAAGGTAAAGC 57.365 37.500 0.00 0.00 0.00 3.51
2928 3091 6.126409 TCTGAAAAGGAAGAAAGGTAAAGCA 58.874 36.000 0.00 0.00 0.00 3.91
2929 3092 6.263168 TCTGAAAAGGAAGAAAGGTAAAGCAG 59.737 38.462 0.00 0.00 0.00 4.24
2930 3093 5.301805 TGAAAAGGAAGAAAGGTAAAGCAGG 59.698 40.000 0.00 0.00 0.00 4.85
2931 3094 4.724279 AAGGAAGAAAGGTAAAGCAGGA 57.276 40.909 0.00 0.00 0.00 3.86
2932 3095 4.293662 AGGAAGAAAGGTAAAGCAGGAG 57.706 45.455 0.00 0.00 0.00 3.69
2933 3096 2.750166 GGAAGAAAGGTAAAGCAGGAGC 59.250 50.000 0.00 0.00 42.56 4.70
2953 3116 4.027572 GCTTGTGCTGTTAAACTTGACA 57.972 40.909 0.00 0.00 36.03 3.58
2954 3117 4.610945 GCTTGTGCTGTTAAACTTGACAT 58.389 39.130 0.00 0.00 36.03 3.06
2955 3118 4.442073 GCTTGTGCTGTTAAACTTGACATG 59.558 41.667 0.00 0.00 36.03 3.21
2956 3119 4.566545 TGTGCTGTTAAACTTGACATGG 57.433 40.909 0.00 0.00 0.00 3.66
2957 3120 3.243367 TGTGCTGTTAAACTTGACATGGC 60.243 43.478 0.00 0.00 0.00 4.40
2958 3121 3.004734 GTGCTGTTAAACTTGACATGGCT 59.995 43.478 0.00 0.00 0.00 4.75
2959 3122 4.215399 GTGCTGTTAAACTTGACATGGCTA 59.785 41.667 0.00 0.00 0.00 3.93
2960 3123 4.824537 TGCTGTTAAACTTGACATGGCTAA 59.175 37.500 0.00 0.00 0.00 3.09
2961 3124 5.300539 TGCTGTTAAACTTGACATGGCTAAA 59.699 36.000 0.00 0.00 0.00 1.85
2962 3125 5.858581 GCTGTTAAACTTGACATGGCTAAAG 59.141 40.000 0.00 0.00 0.00 1.85
2963 3126 5.768317 TGTTAAACTTGACATGGCTAAAGC 58.232 37.500 0.00 0.00 41.14 3.51
2964 3127 5.300539 TGTTAAACTTGACATGGCTAAAGCA 59.699 36.000 0.00 0.00 44.36 3.91
2965 3128 6.015519 TGTTAAACTTGACATGGCTAAAGCAT 60.016 34.615 0.00 0.00 44.36 3.79
2966 3129 7.175816 TGTTAAACTTGACATGGCTAAAGCATA 59.824 33.333 0.00 0.00 44.36 3.14
2967 3130 6.780457 AAACTTGACATGGCTAAAGCATAT 57.220 33.333 0.00 0.00 44.36 1.78
2968 3131 5.762825 ACTTGACATGGCTAAAGCATATG 57.237 39.130 0.00 13.60 44.36 1.78
2969 3132 5.439721 ACTTGACATGGCTAAAGCATATGA 58.560 37.500 19.13 2.31 44.36 2.15
2970 3133 6.066690 ACTTGACATGGCTAAAGCATATGAT 58.933 36.000 19.13 0.00 44.36 2.45
2971 3134 6.206243 ACTTGACATGGCTAAAGCATATGATC 59.794 38.462 19.13 14.24 44.36 2.92
2972 3135 4.692155 TGACATGGCTAAAGCATATGATCG 59.308 41.667 19.13 0.00 44.36 3.69
2973 3136 4.898320 ACATGGCTAAAGCATATGATCGA 58.102 39.130 19.13 0.00 44.36 3.59
2974 3137 4.934001 ACATGGCTAAAGCATATGATCGAG 59.066 41.667 19.13 2.27 44.36 4.04
2975 3138 4.607293 TGGCTAAAGCATATGATCGAGT 57.393 40.909 6.97 0.00 44.36 4.18
2976 3139 4.960938 TGGCTAAAGCATATGATCGAGTT 58.039 39.130 6.97 0.00 44.36 3.01
2977 3140 4.751600 TGGCTAAAGCATATGATCGAGTTG 59.248 41.667 6.97 0.00 44.36 3.16
2978 3141 4.991056 GGCTAAAGCATATGATCGAGTTGA 59.009 41.667 6.97 0.00 44.36 3.18
2979 3142 5.466728 GGCTAAAGCATATGATCGAGTTGAA 59.533 40.000 6.97 0.00 44.36 2.69
2980 3143 6.148480 GGCTAAAGCATATGATCGAGTTGAAT 59.852 38.462 6.97 0.00 44.36 2.57
2981 3144 7.014115 GCTAAAGCATATGATCGAGTTGAATG 58.986 38.462 6.97 0.00 41.59 2.67
2982 3145 5.936686 AAGCATATGATCGAGTTGAATGG 57.063 39.130 6.97 0.00 0.00 3.16
2983 3146 4.965814 AGCATATGATCGAGTTGAATGGT 58.034 39.130 6.97 0.00 0.00 3.55
2984 3147 4.993584 AGCATATGATCGAGTTGAATGGTC 59.006 41.667 6.97 0.00 0.00 4.02
2985 3148 4.143242 GCATATGATCGAGTTGAATGGTCG 60.143 45.833 6.97 0.00 34.98 4.79
2986 3149 3.526931 ATGATCGAGTTGAATGGTCGT 57.473 42.857 0.00 0.00 35.22 4.34
2987 3150 4.649088 ATGATCGAGTTGAATGGTCGTA 57.351 40.909 0.00 0.00 35.22 3.43
2988 3151 3.766151 TGATCGAGTTGAATGGTCGTAC 58.234 45.455 0.00 0.00 35.22 3.67
2989 3152 3.442625 TGATCGAGTTGAATGGTCGTACT 59.557 43.478 0.00 0.00 35.22 2.73
2990 3153 3.928727 TCGAGTTGAATGGTCGTACTT 57.071 42.857 0.00 0.00 35.22 2.24
2991 3154 3.571571 TCGAGTTGAATGGTCGTACTTG 58.428 45.455 0.00 0.00 35.22 3.16
2992 3155 3.253921 TCGAGTTGAATGGTCGTACTTGA 59.746 43.478 0.00 0.00 32.84 3.02
2993 3156 3.608506 CGAGTTGAATGGTCGTACTTGAG 59.391 47.826 0.00 0.00 29.78 3.02
2994 3157 3.926616 AGTTGAATGGTCGTACTTGAGG 58.073 45.455 0.00 0.00 0.00 3.86
2995 3158 3.000727 GTTGAATGGTCGTACTTGAGGG 58.999 50.000 0.00 0.00 0.00 4.30
2996 3159 1.066430 TGAATGGTCGTACTTGAGGGC 60.066 52.381 0.00 0.00 0.00 5.19
2997 3160 0.108329 AATGGTCGTACTTGAGGGCG 60.108 55.000 0.00 0.00 0.00 6.13
2998 3161 1.956629 ATGGTCGTACTTGAGGGCGG 61.957 60.000 0.00 0.00 0.00 6.13
2999 3162 2.643232 GGTCGTACTTGAGGGCGGT 61.643 63.158 0.00 0.00 0.00 5.68
3000 3163 1.153881 GTCGTACTTGAGGGCGGTC 60.154 63.158 0.00 0.00 0.00 4.79
3001 3164 1.604308 TCGTACTTGAGGGCGGTCA 60.604 57.895 0.00 0.00 0.00 4.02
3002 3165 0.968901 TCGTACTTGAGGGCGGTCAT 60.969 55.000 0.00 0.00 0.00 3.06
3003 3166 0.806102 CGTACTTGAGGGCGGTCATG 60.806 60.000 0.00 0.00 0.00 3.07
3004 3167 0.462047 GTACTTGAGGGCGGTCATGG 60.462 60.000 0.00 0.00 0.00 3.66
3005 3168 2.252072 TACTTGAGGGCGGTCATGGC 62.252 60.000 0.00 0.00 0.00 4.40
3012 3175 3.064324 GCGGTCATGGCCAAGCTT 61.064 61.111 18.31 0.00 0.00 3.74
3013 3176 2.879907 CGGTCATGGCCAAGCTTG 59.120 61.111 19.93 19.93 0.00 4.01
3023 3186 2.714259 CCAAGCTTGGTTTCACGGA 58.286 52.632 33.46 0.00 43.43 4.69
3024 3187 1.247567 CCAAGCTTGGTTTCACGGAT 58.752 50.000 33.46 0.00 43.43 4.18
3025 3188 2.432444 CCAAGCTTGGTTTCACGGATA 58.568 47.619 33.46 0.00 43.43 2.59
3026 3189 3.016736 CCAAGCTTGGTTTCACGGATAT 58.983 45.455 33.46 0.00 43.43 1.63
3027 3190 3.443681 CCAAGCTTGGTTTCACGGATATT 59.556 43.478 33.46 0.00 43.43 1.28
3028 3191 4.082245 CCAAGCTTGGTTTCACGGATATTT 60.082 41.667 33.46 0.00 43.43 1.40
3029 3192 4.701956 AGCTTGGTTTCACGGATATTTG 57.298 40.909 0.00 0.00 0.00 2.32
3030 3193 3.443681 AGCTTGGTTTCACGGATATTTGG 59.556 43.478 0.00 0.00 0.00 3.28
3031 3194 3.442273 GCTTGGTTTCACGGATATTTGGA 59.558 43.478 0.00 0.00 0.00 3.53
3032 3195 4.097892 GCTTGGTTTCACGGATATTTGGAT 59.902 41.667 0.00 0.00 0.00 3.41
3033 3196 5.394115 GCTTGGTTTCACGGATATTTGGATT 60.394 40.000 0.00 0.00 0.00 3.01
3034 3197 6.183360 GCTTGGTTTCACGGATATTTGGATTA 60.183 38.462 0.00 0.00 0.00 1.75
3035 3198 7.629652 GCTTGGTTTCACGGATATTTGGATTAA 60.630 37.037 0.00 0.00 0.00 1.40
3036 3199 7.889873 TGGTTTCACGGATATTTGGATTAAT 57.110 32.000 0.00 0.00 0.00 1.40
3037 3200 7.936584 TGGTTTCACGGATATTTGGATTAATC 58.063 34.615 6.93 6.93 0.00 1.75
3038 3201 7.075741 GGTTTCACGGATATTTGGATTAATCG 58.924 38.462 9.32 0.00 0.00 3.34
3039 3202 7.041644 GGTTTCACGGATATTTGGATTAATCGA 60.042 37.037 9.32 2.51 0.00 3.59
3040 3203 7.652300 TTCACGGATATTTGGATTAATCGAG 57.348 36.000 9.32 0.00 0.00 4.04
3041 3204 6.755206 TCACGGATATTTGGATTAATCGAGT 58.245 36.000 9.32 0.00 0.00 4.18
3042 3205 7.888424 TCACGGATATTTGGATTAATCGAGTA 58.112 34.615 9.32 3.81 0.00 2.59
3043 3206 8.361889 TCACGGATATTTGGATTAATCGAGTAA 58.638 33.333 7.89 7.89 0.00 2.24
3044 3207 9.151471 CACGGATATTTGGATTAATCGAGTAAT 57.849 33.333 17.32 17.32 0.00 1.89
3045 3208 9.151471 ACGGATATTTGGATTAATCGAGTAATG 57.849 33.333 21.68 6.75 0.00 1.90
3046 3209 9.151471 CGGATATTTGGATTAATCGAGTAATGT 57.849 33.333 21.68 0.38 0.00 2.71
3048 3211 9.760660 GATATTTGGATTAATCGAGTAATGTGC 57.239 33.333 21.68 8.30 0.00 4.57
3049 3212 7.807977 ATTTGGATTAATCGAGTAATGTGCT 57.192 32.000 21.68 0.00 0.00 4.40
3050 3213 6.603237 TTGGATTAATCGAGTAATGTGCTG 57.397 37.500 21.68 0.00 0.00 4.41
3051 3214 5.670485 TGGATTAATCGAGTAATGTGCTGT 58.330 37.500 21.68 0.00 0.00 4.40
3052 3215 5.523552 TGGATTAATCGAGTAATGTGCTGTG 59.476 40.000 21.68 0.00 0.00 3.66
3053 3216 5.523916 GGATTAATCGAGTAATGTGCTGTGT 59.476 40.000 21.68 0.00 0.00 3.72
3054 3217 5.778161 TTAATCGAGTAATGTGCTGTGTG 57.222 39.130 0.32 0.00 0.00 3.82
3055 3218 2.078849 TCGAGTAATGTGCTGTGTGG 57.921 50.000 0.00 0.00 0.00 4.17
3056 3219 1.616374 TCGAGTAATGTGCTGTGTGGA 59.384 47.619 0.00 0.00 0.00 4.02
3057 3220 2.036604 TCGAGTAATGTGCTGTGTGGAA 59.963 45.455 0.00 0.00 0.00 3.53
3058 3221 2.805671 CGAGTAATGTGCTGTGTGGAAA 59.194 45.455 0.00 0.00 0.00 3.13
3059 3222 3.363970 CGAGTAATGTGCTGTGTGGAAAC 60.364 47.826 0.00 0.00 0.00 2.78
3060 3223 2.548057 AGTAATGTGCTGTGTGGAAACG 59.452 45.455 0.00 0.00 0.00 3.60
3061 3224 0.667993 AATGTGCTGTGTGGAAACGG 59.332 50.000 0.00 0.00 0.00 4.44
3062 3225 0.465460 ATGTGCTGTGTGGAAACGGT 60.465 50.000 0.00 0.00 0.00 4.83
3063 3226 1.355210 GTGCTGTGTGGAAACGGTG 59.645 57.895 0.00 0.00 0.00 4.94
3064 3227 1.078072 TGCTGTGTGGAAACGGTGT 60.078 52.632 0.00 0.00 0.00 4.16
3065 3228 1.092921 TGCTGTGTGGAAACGGTGTC 61.093 55.000 0.00 0.00 0.00 3.67
3066 3229 1.931551 CTGTGTGGAAACGGTGTCG 59.068 57.895 0.00 0.00 43.02 4.35
3078 3241 1.847818 CGGTGTCGTTTTCAGTCAGA 58.152 50.000 0.00 0.00 0.00 3.27
3079 3242 1.787155 CGGTGTCGTTTTCAGTCAGAG 59.213 52.381 0.00 0.00 0.00 3.35
3080 3243 2.798499 CGGTGTCGTTTTCAGTCAGAGT 60.798 50.000 0.00 0.00 0.00 3.24
3081 3244 3.549423 CGGTGTCGTTTTCAGTCAGAGTA 60.549 47.826 0.00 0.00 0.00 2.59
3082 3245 4.365723 GGTGTCGTTTTCAGTCAGAGTAA 58.634 43.478 0.00 0.00 0.00 2.24
3083 3246 4.807304 GGTGTCGTTTTCAGTCAGAGTAAA 59.193 41.667 0.00 0.00 0.00 2.01
3084 3247 5.465724 GGTGTCGTTTTCAGTCAGAGTAAAT 59.534 40.000 0.00 0.00 0.00 1.40
3085 3248 6.355638 GTGTCGTTTTCAGTCAGAGTAAATG 58.644 40.000 0.00 0.00 0.00 2.32
3086 3249 5.465390 TGTCGTTTTCAGTCAGAGTAAATGG 59.535 40.000 0.00 0.00 0.00 3.16
3087 3250 4.994852 TCGTTTTCAGTCAGAGTAAATGGG 59.005 41.667 0.00 0.00 0.00 4.00
3088 3251 4.154195 CGTTTTCAGTCAGAGTAAATGGGG 59.846 45.833 0.00 0.00 0.00 4.96
3089 3252 4.993705 TTTCAGTCAGAGTAAATGGGGT 57.006 40.909 0.00 0.00 0.00 4.95
3090 3253 3.981071 TCAGTCAGAGTAAATGGGGTG 57.019 47.619 0.00 0.00 0.00 4.61
3091 3254 2.027192 TCAGTCAGAGTAAATGGGGTGC 60.027 50.000 0.00 0.00 0.00 5.01
3092 3255 2.026822 CAGTCAGAGTAAATGGGGTGCT 60.027 50.000 0.00 0.00 0.00 4.40
3093 3256 2.237392 AGTCAGAGTAAATGGGGTGCTC 59.763 50.000 0.00 0.00 0.00 4.26
3094 3257 2.237392 GTCAGAGTAAATGGGGTGCTCT 59.763 50.000 0.00 0.00 37.04 4.09
3095 3258 2.501723 TCAGAGTAAATGGGGTGCTCTC 59.498 50.000 0.00 0.00 34.68 3.20
3096 3259 1.482593 AGAGTAAATGGGGTGCTCTCG 59.517 52.381 0.00 0.00 31.65 4.04
3097 3260 0.541863 AGTAAATGGGGTGCTCTCGG 59.458 55.000 0.00 0.00 0.00 4.63
3098 3261 0.539986 GTAAATGGGGTGCTCTCGGA 59.460 55.000 0.00 0.00 0.00 4.55
3099 3262 1.065709 GTAAATGGGGTGCTCTCGGAA 60.066 52.381 0.00 0.00 0.00 4.30
3100 3263 0.625849 AAATGGGGTGCTCTCGGAAT 59.374 50.000 0.00 0.00 0.00 3.01
3101 3264 0.625849 AATGGGGTGCTCTCGGAATT 59.374 50.000 0.00 0.00 0.00 2.17
3102 3265 0.625849 ATGGGGTGCTCTCGGAATTT 59.374 50.000 0.00 0.00 0.00 1.82
3103 3266 0.404040 TGGGGTGCTCTCGGAATTTT 59.596 50.000 0.00 0.00 0.00 1.82
3104 3267 1.203001 TGGGGTGCTCTCGGAATTTTT 60.203 47.619 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.432628 GACCTGGCCACGTCGAAG 60.433 66.667 17.50 0.00 0.00 3.79
84 92 2.946990 ACTCCAATTAAATAACCGCCGG 59.053 45.455 0.00 0.00 0.00 6.13
95 103 6.127758 CGGTGGAATCAATCAACTCCAATTAA 60.128 38.462 0.00 0.00 39.62 1.40
123 141 2.603652 CCAGTTTAGTTTTTGACGGGCG 60.604 50.000 0.00 0.00 0.00 6.13
132 151 7.612633 TGTCAAACTACCTTCCAGTTTAGTTTT 59.387 33.333 3.43 0.00 42.79 2.43
199 219 5.512942 TGAAACCATCCCAATTGTCTCTA 57.487 39.130 4.43 0.00 0.00 2.43
207 227 5.959594 TCAAGAATGATGAAACCATCCCAAT 59.040 36.000 0.00 0.00 39.67 3.16
241 262 2.029288 CGCAGGGTGCACACTAGTG 61.029 63.158 23.88 21.44 45.36 2.74
243 264 1.446792 CTCGCAGGGTGCACACTAG 60.447 63.158 23.88 18.84 45.36 2.57
352 396 3.784412 CAGTTAACGTGCGGCCGG 61.784 66.667 29.38 13.36 0.00 6.13
353 397 2.020836 GATCAGTTAACGTGCGGCCG 62.021 60.000 24.05 24.05 0.00 6.13
354 398 1.702491 GGATCAGTTAACGTGCGGCC 61.702 60.000 0.00 0.00 0.00 6.13
355 399 1.713830 GGATCAGTTAACGTGCGGC 59.286 57.895 0.00 0.00 0.00 6.53
356 400 1.995991 CGGATCAGTTAACGTGCGG 59.004 57.895 12.27 1.26 0.00 5.69
375 419 4.351938 TCAAGGCGACGTCCGTGG 62.352 66.667 10.58 2.56 41.15 4.94
427 475 1.865788 TTAAGTCGCGGCGTGGTAGT 61.866 55.000 22.90 2.52 0.00 2.73
430 478 0.952010 AAATTAAGTCGCGGCGTGGT 60.952 50.000 22.90 10.63 0.00 4.16
432 480 1.136197 TGAAAATTAAGTCGCGGCGTG 60.136 47.619 22.90 15.42 0.00 5.34
433 481 1.136169 GTGAAAATTAAGTCGCGGCGT 60.136 47.619 22.90 4.10 0.00 5.68
435 483 1.789054 CGGTGAAAATTAAGTCGCGGC 60.789 52.381 0.21 0.21 0.00 6.53
437 485 1.789054 GCCGGTGAAAATTAAGTCGCG 60.789 52.381 1.90 0.00 0.00 5.87
440 488 1.198178 TGCGCCGGTGAAAATTAAGTC 59.802 47.619 21.76 0.00 0.00 3.01
441 489 1.240256 TGCGCCGGTGAAAATTAAGT 58.760 45.000 21.76 0.00 0.00 2.24
442 490 1.982913 GTTGCGCCGGTGAAAATTAAG 59.017 47.619 21.76 0.00 0.00 1.85
502 551 1.440060 CGGCGGCAGTGGAGTAATA 59.560 57.895 10.53 0.00 0.00 0.98
572 622 0.110823 GTCACCGCGCAGTTAAACAG 60.111 55.000 8.75 0.00 0.00 3.16
612 662 2.033299 TGAAACAGGAGCAAAAGCGAAG 59.967 45.455 0.00 0.00 0.00 3.79
613 663 2.020720 TGAAACAGGAGCAAAAGCGAA 58.979 42.857 0.00 0.00 0.00 4.70
614 664 1.333619 GTGAAACAGGAGCAAAAGCGA 59.666 47.619 0.00 0.00 36.32 4.93
615 665 1.600413 GGTGAAACAGGAGCAAAAGCG 60.600 52.381 0.00 0.00 39.98 4.68
616 666 1.600413 CGGTGAAACAGGAGCAAAAGC 60.600 52.381 0.00 0.00 39.98 3.51
617 667 1.676006 ACGGTGAAACAGGAGCAAAAG 59.324 47.619 0.00 0.00 39.98 2.27
618 668 1.403679 CACGGTGAAACAGGAGCAAAA 59.596 47.619 0.74 0.00 39.98 2.44
619 669 1.021202 CACGGTGAAACAGGAGCAAA 58.979 50.000 0.74 0.00 39.98 3.68
620 670 1.444119 GCACGGTGAAACAGGAGCAA 61.444 55.000 13.29 0.00 39.98 3.91
621 671 1.891919 GCACGGTGAAACAGGAGCA 60.892 57.895 13.29 0.00 39.98 4.26
622 672 1.845809 CTGCACGGTGAAACAGGAGC 61.846 60.000 13.29 0.00 39.98 4.70
623 673 2.238353 CTGCACGGTGAAACAGGAG 58.762 57.895 13.29 0.00 39.98 3.69
624 674 4.454948 CTGCACGGTGAAACAGGA 57.545 55.556 13.29 0.00 39.98 3.86
625 675 3.343972 CCTGCACGGTGAAACAGG 58.656 61.111 13.29 14.77 43.45 4.00
626 676 1.845809 GAGCCTGCACGGTGAAACAG 61.846 60.000 13.29 9.59 39.98 3.16
627 677 1.891919 GAGCCTGCACGGTGAAACA 60.892 57.895 13.29 0.00 39.98 2.83
628 678 2.946762 GAGCCTGCACGGTGAAAC 59.053 61.111 13.29 0.00 34.25 2.78
664 714 1.120530 CCCGGCTATGTACCTTCACT 58.879 55.000 0.00 0.00 0.00 3.41
669 719 1.764854 CCACCCCGGCTATGTACCT 60.765 63.158 0.00 0.00 0.00 3.08
685 735 3.741830 TTTGTCTGGTGACGCGCCA 62.742 57.895 5.73 4.59 45.70 5.69
839 908 2.241659 GGGATGGGGATGGGGATCC 61.242 68.421 1.92 1.92 39.99 3.36
962 1046 3.403057 CCCACGAACAGCACGACG 61.403 66.667 0.00 0.00 34.70 5.12
964 1048 4.980805 GCCCCACGAACAGCACGA 62.981 66.667 0.00 0.00 34.70 4.35
965 1049 4.988598 AGCCCCACGAACAGCACG 62.989 66.667 0.00 0.00 0.00 5.34
966 1050 3.357079 CAGCCCCACGAACAGCAC 61.357 66.667 0.00 0.00 0.00 4.40
969 1053 1.973281 AATGCAGCCCCACGAACAG 60.973 57.895 0.00 0.00 0.00 3.16
970 1054 2.115052 AATGCAGCCCCACGAACA 59.885 55.556 0.00 0.00 0.00 3.18
971 1055 2.568090 CAATGCAGCCCCACGAAC 59.432 61.111 0.00 0.00 0.00 3.95
972 1056 3.372730 GCAATGCAGCCCCACGAA 61.373 61.111 0.00 0.00 0.00 3.85
973 1057 4.349503 AGCAATGCAGCCCCACGA 62.350 61.111 8.35 0.00 34.23 4.35
974 1058 3.818787 GAGCAATGCAGCCCCACG 61.819 66.667 8.35 0.00 34.23 4.94
975 1059 3.818787 CGAGCAATGCAGCCCCAC 61.819 66.667 8.35 0.00 34.23 4.61
1215 1303 1.528129 CTTCTTCACCCTGGTCTTGC 58.472 55.000 0.00 0.00 0.00 4.01
1224 1312 1.079057 GTCCTCGCCTTCTTCACCC 60.079 63.158 0.00 0.00 0.00 4.61
1226 1314 0.318762 AGTGTCCTCGCCTTCTTCAC 59.681 55.000 0.00 0.00 0.00 3.18
1227 1315 0.318441 CAGTGTCCTCGCCTTCTTCA 59.682 55.000 0.00 0.00 0.00 3.02
1229 1317 0.605589 CTCAGTGTCCTCGCCTTCTT 59.394 55.000 0.00 0.00 0.00 2.52
1230 1318 1.254284 CCTCAGTGTCCTCGCCTTCT 61.254 60.000 0.00 0.00 0.00 2.85
1231 1319 1.216710 CCTCAGTGTCCTCGCCTTC 59.783 63.158 0.00 0.00 0.00 3.46
1232 1320 2.948720 GCCTCAGTGTCCTCGCCTT 61.949 63.158 0.00 0.00 0.00 4.35
1233 1321 3.386237 GCCTCAGTGTCCTCGCCT 61.386 66.667 0.00 0.00 0.00 5.52
1236 1324 2.418910 ATCGGCCTCAGTGTCCTCG 61.419 63.158 0.00 0.00 0.00 4.63
1239 1327 2.512515 GCATCGGCCTCAGTGTCC 60.513 66.667 0.00 0.00 0.00 4.02
1267 1355 3.316573 CTTCTTCCTCCGGCGGCTT 62.317 63.158 23.83 0.00 0.00 4.35
1791 1903 3.667429 GATGCCGTTTGTGCCGAGC 62.667 63.158 0.00 0.00 0.00 5.03
1794 1906 4.459331 CGGATGCCGTTTGTGCCG 62.459 66.667 0.00 0.00 42.73 5.69
1956 2098 1.664649 CGTCGCCTTGTCTGCTTCA 60.665 57.895 0.00 0.00 0.00 3.02
2157 2310 0.107165 GTACATTCAGTGAGGGGGCC 60.107 60.000 0.00 0.00 0.00 5.80
2160 2313 3.967326 TCCTATGTACATTCAGTGAGGGG 59.033 47.826 14.77 3.55 0.00 4.79
2162 2315 5.506483 CGAGTCCTATGTACATTCAGTGAGG 60.506 48.000 14.77 13.24 0.00 3.86
2203 2356 1.437986 GTGGAAGGGATCGACGAGG 59.562 63.158 3.01 0.00 0.00 4.63
2267 2427 8.967664 AGTACAGTACAGAGATAAGTAAGAGG 57.032 38.462 13.37 0.00 0.00 3.69
2271 2431 7.765819 TGCGTAGTACAGTACAGAGATAAGTAA 59.234 37.037 13.37 0.00 0.00 2.24
2273 2433 6.111382 TGCGTAGTACAGTACAGAGATAAGT 58.889 40.000 13.37 0.00 0.00 2.24
2338 2498 3.417069 TGACTTGGACGGTTCATGATT 57.583 42.857 9.13 0.00 0.00 2.57
2355 2515 2.128771 AGTGGTACATGGCCATTGAC 57.871 50.000 17.92 16.55 44.52 3.18
2377 2537 4.947645 ACGGTTTTACTAGTGCACACTAA 58.052 39.130 21.04 8.11 42.72 2.24
2381 2541 4.507388 GTGTTACGGTTTTACTAGTGCACA 59.493 41.667 21.04 4.13 0.00 4.57
2382 2542 4.375305 CGTGTTACGGTTTTACTAGTGCAC 60.375 45.833 9.40 9.40 38.08 4.57
2383 2543 3.735240 CGTGTTACGGTTTTACTAGTGCA 59.265 43.478 5.39 0.00 38.08 4.57
2429 2591 0.661020 GGACCGGTGAGTTTGTGTTG 59.339 55.000 14.63 0.00 0.00 3.33
2441 2603 4.740822 GCCATGCAAGGGACCGGT 62.741 66.667 6.92 6.92 43.46 5.28
2443 2605 4.776322 TCGCCATGCAAGGGACCG 62.776 66.667 10.51 5.12 43.46 4.79
2455 2617 1.408127 CCATTAACCCATGTCTCGCCA 60.408 52.381 0.00 0.00 0.00 5.69
2478 2640 2.067932 CTCCCCACTCAGCCAACCAA 62.068 60.000 0.00 0.00 0.00 3.67
2479 2641 2.449518 TCCCCACTCAGCCAACCA 60.450 61.111 0.00 0.00 0.00 3.67
2480 2642 2.352805 CTCCCCACTCAGCCAACC 59.647 66.667 0.00 0.00 0.00 3.77
2486 2648 1.630126 CCATCACCCTCCCCACTCAG 61.630 65.000 0.00 0.00 0.00 3.35
2494 2656 3.813724 CTGGCCCCATCACCCTCC 61.814 72.222 0.00 0.00 0.00 4.30
2495 2657 2.692368 TCTGGCCCCATCACCCTC 60.692 66.667 0.00 0.00 0.00 4.30
2496 2658 2.574195 ATCTCTGGCCCCATCACCCT 62.574 60.000 0.00 0.00 0.00 4.34
2497 2659 1.649271 AATCTCTGGCCCCATCACCC 61.649 60.000 0.00 0.00 0.00 4.61
2498 2660 1.072965 CTAATCTCTGGCCCCATCACC 59.927 57.143 0.00 0.00 0.00 4.02
2499 2661 2.038295 CTCTAATCTCTGGCCCCATCAC 59.962 54.545 0.00 0.00 0.00 3.06
2500 2662 2.333069 CTCTAATCTCTGGCCCCATCA 58.667 52.381 0.00 0.00 0.00 3.07
2501 2663 1.627834 CCTCTAATCTCTGGCCCCATC 59.372 57.143 0.00 0.00 0.00 3.51
2502 2664 1.224120 TCCTCTAATCTCTGGCCCCAT 59.776 52.381 0.00 0.00 0.00 4.00
2503 2665 0.642156 TCCTCTAATCTCTGGCCCCA 59.358 55.000 0.00 0.00 0.00 4.96
2504 2666 1.133009 TCTCCTCTAATCTCTGGCCCC 60.133 57.143 0.00 0.00 0.00 5.80
2505 2667 2.390225 TCTCCTCTAATCTCTGGCCC 57.610 55.000 0.00 0.00 0.00 5.80
2506 2668 2.028203 GCATCTCCTCTAATCTCTGGCC 60.028 54.545 0.00 0.00 0.00 5.36
2507 2669 2.028203 GGCATCTCCTCTAATCTCTGGC 60.028 54.545 0.00 0.00 0.00 4.85
2508 2670 3.237746 TGGCATCTCCTCTAATCTCTGG 58.762 50.000 0.00 0.00 35.26 3.86
2509 2671 4.952071 TTGGCATCTCCTCTAATCTCTG 57.048 45.455 0.00 0.00 35.26 3.35
2510 2672 5.605908 TCATTTGGCATCTCCTCTAATCTCT 59.394 40.000 0.00 0.00 35.26 3.10
2511 2673 5.862845 TCATTTGGCATCTCCTCTAATCTC 58.137 41.667 0.00 0.00 35.26 2.75
2512 2674 5.901413 TCATTTGGCATCTCCTCTAATCT 57.099 39.130 0.00 0.00 35.26 2.40
2513 2675 7.368833 CAAATCATTTGGCATCTCCTCTAATC 58.631 38.462 1.73 0.00 37.01 1.75
2514 2676 7.286215 CAAATCATTTGGCATCTCCTCTAAT 57.714 36.000 1.73 0.00 37.01 1.73
2515 2677 6.704289 CAAATCATTTGGCATCTCCTCTAA 57.296 37.500 1.73 0.00 37.01 2.10
2634 2797 4.292178 GCCCAGAGCTCCCGATCG 62.292 72.222 10.93 8.51 38.99 3.69
2668 2831 7.693952 AGAATGGTGTTATTTATGTTGCGTAG 58.306 34.615 0.00 0.00 0.00 3.51
2669 2832 7.618502 AGAATGGTGTTATTTATGTTGCGTA 57.381 32.000 0.00 0.00 0.00 4.42
2670 2833 6.509418 AGAATGGTGTTATTTATGTTGCGT 57.491 33.333 0.00 0.00 0.00 5.24
2671 2834 6.806249 ACAAGAATGGTGTTATTTATGTTGCG 59.194 34.615 0.00 0.00 0.00 4.85
2672 2835 8.532977 AACAAGAATGGTGTTATTTATGTTGC 57.467 30.769 0.00 0.00 37.44 4.17
2679 2842 9.271828 GGAATCAAAACAAGAATGGTGTTATTT 57.728 29.630 0.00 0.00 38.24 1.40
2680 2843 8.650490 AGGAATCAAAACAAGAATGGTGTTATT 58.350 29.630 0.00 0.00 38.24 1.40
2681 2844 8.193953 AGGAATCAAAACAAGAATGGTGTTAT 57.806 30.769 0.00 0.00 38.24 1.89
2682 2845 7.595819 AGGAATCAAAACAAGAATGGTGTTA 57.404 32.000 0.00 0.00 38.24 2.41
2683 2846 6.484364 AGGAATCAAAACAAGAATGGTGTT 57.516 33.333 0.00 0.00 40.92 3.32
2684 2847 7.255942 CCTTAGGAATCAAAACAAGAATGGTGT 60.256 37.037 0.00 0.00 0.00 4.16
2685 2848 7.092716 CCTTAGGAATCAAAACAAGAATGGTG 58.907 38.462 0.00 0.00 0.00 4.17
2686 2849 6.782494 ACCTTAGGAATCAAAACAAGAATGGT 59.218 34.615 4.77 0.00 0.00 3.55
2687 2850 7.232118 ACCTTAGGAATCAAAACAAGAATGG 57.768 36.000 4.77 0.00 0.00 3.16
2692 2855 9.639601 GGATTTTACCTTAGGAATCAAAACAAG 57.360 33.333 4.77 0.00 31.72 3.16
2693 2856 8.590204 GGGATTTTACCTTAGGAATCAAAACAA 58.410 33.333 4.77 0.00 31.72 2.83
2694 2857 7.179516 GGGGATTTTACCTTAGGAATCAAAACA 59.820 37.037 4.77 0.00 31.72 2.83
2695 2858 7.179516 TGGGGATTTTACCTTAGGAATCAAAAC 59.820 37.037 4.77 0.00 31.72 2.43
2696 2859 7.179516 GTGGGGATTTTACCTTAGGAATCAAAA 59.820 37.037 4.77 6.32 31.72 2.44
2697 2860 6.666113 GTGGGGATTTTACCTTAGGAATCAAA 59.334 38.462 4.77 0.00 31.72 2.69
2698 2861 6.192044 GTGGGGATTTTACCTTAGGAATCAA 58.808 40.000 4.77 0.00 31.72 2.57
2699 2862 5.254267 TGTGGGGATTTTACCTTAGGAATCA 59.746 40.000 4.77 0.00 31.72 2.57
2700 2863 5.762279 TGTGGGGATTTTACCTTAGGAATC 58.238 41.667 4.77 3.91 0.00 2.52
2701 2864 5.806955 TGTGGGGATTTTACCTTAGGAAT 57.193 39.130 4.77 0.00 0.00 3.01
2702 2865 5.313772 TCTTGTGGGGATTTTACCTTAGGAA 59.686 40.000 4.77 0.00 0.00 3.36
2703 2866 4.853276 TCTTGTGGGGATTTTACCTTAGGA 59.147 41.667 4.77 0.00 0.00 2.94
2704 2867 5.187621 TCTTGTGGGGATTTTACCTTAGG 57.812 43.478 0.00 0.00 0.00 2.69
2706 2869 9.856162 GTTATATCTTGTGGGGATTTTACCTTA 57.144 33.333 0.00 0.00 0.00 2.69
2707 2870 7.783119 GGTTATATCTTGTGGGGATTTTACCTT 59.217 37.037 0.00 0.00 0.00 3.50
2708 2871 7.295340 GGTTATATCTTGTGGGGATTTTACCT 58.705 38.462 0.00 0.00 0.00 3.08
2709 2872 6.492429 GGGTTATATCTTGTGGGGATTTTACC 59.508 42.308 0.00 0.00 0.00 2.85
2710 2873 7.064229 TGGGTTATATCTTGTGGGGATTTTAC 58.936 38.462 0.00 0.00 0.00 2.01
2711 2874 7.227355 TGGGTTATATCTTGTGGGGATTTTA 57.773 36.000 0.00 0.00 0.00 1.52
2712 2875 6.098716 TGGGTTATATCTTGTGGGGATTTT 57.901 37.500 0.00 0.00 0.00 1.82
2713 2876 5.742562 TGGGTTATATCTTGTGGGGATTT 57.257 39.130 0.00 0.00 0.00 2.17
2714 2877 5.742562 TTGGGTTATATCTTGTGGGGATT 57.257 39.130 0.00 0.00 0.00 3.01
2715 2878 5.948481 ATTGGGTTATATCTTGTGGGGAT 57.052 39.130 0.00 0.00 0.00 3.85
2716 2879 5.742562 AATTGGGTTATATCTTGTGGGGA 57.257 39.130 0.00 0.00 0.00 4.81
2717 2880 7.230712 GTCTAAATTGGGTTATATCTTGTGGGG 59.769 40.741 0.00 0.00 0.00 4.96
2718 2881 7.230712 GGTCTAAATTGGGTTATATCTTGTGGG 59.769 40.741 0.00 0.00 0.00 4.61
2719 2882 7.230712 GGGTCTAAATTGGGTTATATCTTGTGG 59.769 40.741 0.00 0.00 0.00 4.17
2720 2883 7.777910 TGGGTCTAAATTGGGTTATATCTTGTG 59.222 37.037 0.00 0.00 0.00 3.33
2721 2884 7.878495 TGGGTCTAAATTGGGTTATATCTTGT 58.122 34.615 0.00 0.00 0.00 3.16
2722 2885 8.940397 ATGGGTCTAAATTGGGTTATATCTTG 57.060 34.615 0.00 0.00 0.00 3.02
2730 2893 9.312904 CATAATGATATGGGTCTAAATTGGGTT 57.687 33.333 0.00 0.00 36.13 4.11
2731 2894 7.397192 GCATAATGATATGGGTCTAAATTGGGT 59.603 37.037 0.00 0.00 39.49 4.51
2732 2895 7.396907 TGCATAATGATATGGGTCTAAATTGGG 59.603 37.037 0.00 0.00 39.49 4.12
2733 2896 8.352137 TGCATAATGATATGGGTCTAAATTGG 57.648 34.615 0.00 0.00 39.49 3.16
2736 2899 9.537852 ACATTGCATAATGATATGGGTCTAAAT 57.462 29.630 5.39 0.00 45.21 1.40
2737 2900 8.938801 ACATTGCATAATGATATGGGTCTAAA 57.061 30.769 5.39 0.00 45.21 1.85
2738 2901 8.385491 AGACATTGCATAATGATATGGGTCTAA 58.615 33.333 5.39 0.00 45.21 2.10
2739 2902 7.921304 AGACATTGCATAATGATATGGGTCTA 58.079 34.615 5.39 0.00 45.21 2.59
2740 2903 6.787170 AGACATTGCATAATGATATGGGTCT 58.213 36.000 5.39 0.00 45.21 3.85
2741 2904 7.040201 ACAAGACATTGCATAATGATATGGGTC 60.040 37.037 5.39 0.00 45.21 4.46
2742 2905 6.779049 ACAAGACATTGCATAATGATATGGGT 59.221 34.615 5.39 0.00 45.21 4.51
2743 2906 7.223260 ACAAGACATTGCATAATGATATGGG 57.777 36.000 5.39 0.00 45.21 4.00
2744 2907 8.785946 TGTACAAGACATTGCATAATGATATGG 58.214 33.333 5.39 0.00 45.21 2.74
2747 2910 9.612066 TCTTGTACAAGACATTGCATAATGATA 57.388 29.630 30.07 5.98 42.52 2.15
2748 2911 8.510243 TCTTGTACAAGACATTGCATAATGAT 57.490 30.769 30.07 0.00 42.52 2.45
2749 2912 7.920160 TCTTGTACAAGACATTGCATAATGA 57.080 32.000 30.07 7.19 42.52 2.57
2761 2924 8.289907 ACCTTCGAGGCTATCTTGTACAAGAC 62.290 46.154 34.61 23.51 43.86 3.01
2762 2925 6.330184 ACCTTCGAGGCTATCTTGTACAAGA 61.330 44.000 34.14 34.14 44.57 3.02
2763 2926 4.142138 ACCTTCGAGGCTATCTTGTACAAG 60.142 45.833 26.60 26.60 39.63 3.16
2764 2927 3.767673 ACCTTCGAGGCTATCTTGTACAA 59.232 43.478 8.28 8.28 39.63 2.41
2765 2928 3.130516 CACCTTCGAGGCTATCTTGTACA 59.869 47.826 0.00 0.00 39.63 2.90
2766 2929 3.130693 ACACCTTCGAGGCTATCTTGTAC 59.869 47.826 0.00 0.00 39.63 2.90
2767 2930 3.362706 ACACCTTCGAGGCTATCTTGTA 58.637 45.455 0.00 0.00 39.63 2.41
2768 2931 2.180276 ACACCTTCGAGGCTATCTTGT 58.820 47.619 0.00 0.00 39.63 3.16
2769 2932 2.932614 CAACACCTTCGAGGCTATCTTG 59.067 50.000 0.00 0.00 39.63 3.02
2770 2933 2.093447 CCAACACCTTCGAGGCTATCTT 60.093 50.000 0.00 0.00 39.63 2.40
2771 2934 1.482593 CCAACACCTTCGAGGCTATCT 59.517 52.381 0.00 0.00 39.63 1.98
2772 2935 1.941325 CCAACACCTTCGAGGCTATC 58.059 55.000 0.00 0.00 39.63 2.08
2773 2936 0.107654 GCCAACACCTTCGAGGCTAT 60.108 55.000 2.55 0.00 39.63 2.97
2774 2937 1.295423 GCCAACACCTTCGAGGCTA 59.705 57.895 2.55 0.00 39.63 3.93
2775 2938 2.032681 GCCAACACCTTCGAGGCT 59.967 61.111 2.55 0.00 39.63 4.58
2776 2939 2.281484 TGCCAACACCTTCGAGGC 60.281 61.111 2.80 2.80 45.41 4.70
2777 2940 3.655481 GTGCCAACACCTTCGAGG 58.345 61.111 0.03 0.03 41.21 4.63
2785 2948 1.199852 CGCAAACGAAGTGCCAACAC 61.200 55.000 0.00 0.00 45.00 3.32
2786 2949 1.063327 CGCAAACGAAGTGCCAACA 59.937 52.632 0.00 0.00 45.00 3.33
2787 2950 2.292916 GCGCAAACGAAGTGCCAAC 61.293 57.895 0.30 0.00 45.00 3.77
2788 2951 2.025441 GCGCAAACGAAGTGCCAA 59.975 55.556 0.30 0.00 45.00 4.52
2791 2954 3.660111 AGGGCGCAAACGAAGTGC 61.660 61.111 10.83 0.00 45.00 4.40
2792 2955 2.175184 CTCAGGGCGCAAACGAAGTG 62.175 60.000 10.83 0.00 45.00 3.16
2794 2957 2.863153 CTCAGGGCGCAAACGAAG 59.137 61.111 10.83 0.00 43.93 3.79
2795 2958 3.353836 GCTCAGGGCGCAAACGAA 61.354 61.111 10.83 0.00 43.93 3.85
2804 2967 2.426842 AATTACCTCAAGCTCAGGGC 57.573 50.000 14.71 0.00 42.19 5.19
2805 2968 6.122277 TGAAATAATTACCTCAAGCTCAGGG 58.878 40.000 14.71 6.89 35.01 4.45
2806 2969 7.050377 TCTGAAATAATTACCTCAAGCTCAGG 58.950 38.462 9.69 9.69 37.03 3.86
2807 2970 8.498054 TTCTGAAATAATTACCTCAAGCTCAG 57.502 34.615 0.00 0.00 0.00 3.35
2808 2971 8.321353 TCTTCTGAAATAATTACCTCAAGCTCA 58.679 33.333 0.00 0.00 0.00 4.26
2809 2972 8.723942 TCTTCTGAAATAATTACCTCAAGCTC 57.276 34.615 0.00 0.00 0.00 4.09
2810 2973 7.281999 GCTCTTCTGAAATAATTACCTCAAGCT 59.718 37.037 10.23 0.00 0.00 3.74
2811 2974 7.066284 TGCTCTTCTGAAATAATTACCTCAAGC 59.934 37.037 10.43 10.43 0.00 4.01
2812 2975 8.498054 TGCTCTTCTGAAATAATTACCTCAAG 57.502 34.615 0.00 0.00 0.00 3.02
2813 2976 8.862325 TTGCTCTTCTGAAATAATTACCTCAA 57.138 30.769 0.00 0.00 0.00 3.02
2814 2977 8.862325 TTTGCTCTTCTGAAATAATTACCTCA 57.138 30.769 0.00 0.00 0.00 3.86
2815 2978 8.951243 ACTTTGCTCTTCTGAAATAATTACCTC 58.049 33.333 0.00 0.00 0.00 3.85
2816 2979 8.734386 CACTTTGCTCTTCTGAAATAATTACCT 58.266 33.333 0.00 0.00 0.00 3.08
2817 2980 7.486232 GCACTTTGCTCTTCTGAAATAATTACC 59.514 37.037 0.00 0.00 40.96 2.85
2818 2981 8.387053 GCACTTTGCTCTTCTGAAATAATTAC 57.613 34.615 0.00 0.00 40.96 1.89
2837 3000 0.820871 TCCCGCAACAAAAGCACTTT 59.179 45.000 0.00 0.00 0.00 2.66
2838 3001 0.102300 GTCCCGCAACAAAAGCACTT 59.898 50.000 0.00 0.00 0.00 3.16
2839 3002 1.733526 GTCCCGCAACAAAAGCACT 59.266 52.632 0.00 0.00 0.00 4.40
2840 3003 1.657181 CGTCCCGCAACAAAAGCAC 60.657 57.895 0.00 0.00 0.00 4.40
2841 3004 2.718731 CGTCCCGCAACAAAAGCA 59.281 55.556 0.00 0.00 0.00 3.91
2842 3005 2.050442 CCGTCCCGCAACAAAAGC 60.050 61.111 0.00 0.00 0.00 3.51
2843 3006 2.050442 GCCGTCCCGCAACAAAAG 60.050 61.111 0.00 0.00 0.00 2.27
2844 3007 2.517402 AGCCGTCCCGCAACAAAA 60.517 55.556 0.00 0.00 0.00 2.44
2845 3008 2.975799 GAGCCGTCCCGCAACAAA 60.976 61.111 0.00 0.00 0.00 2.83
2846 3009 2.173758 TATGAGCCGTCCCGCAACAA 62.174 55.000 0.00 0.00 0.00 2.83
2847 3010 2.173758 TTATGAGCCGTCCCGCAACA 62.174 55.000 0.00 0.00 0.00 3.33
2848 3011 1.448893 TTATGAGCCGTCCCGCAAC 60.449 57.895 0.00 0.00 0.00 4.17
2849 3012 1.448893 GTTATGAGCCGTCCCGCAA 60.449 57.895 0.00 0.00 0.00 4.85
2850 3013 2.185867 GTTATGAGCCGTCCCGCA 59.814 61.111 0.00 0.00 0.00 5.69
2851 3014 1.883084 CTGTTATGAGCCGTCCCGC 60.883 63.158 0.00 0.00 0.00 6.13
2852 3015 0.527817 GTCTGTTATGAGCCGTCCCG 60.528 60.000 0.00 0.00 0.00 5.14
2853 3016 0.535335 TGTCTGTTATGAGCCGTCCC 59.465 55.000 0.00 0.00 0.00 4.46
2854 3017 2.380084 TTGTCTGTTATGAGCCGTCC 57.620 50.000 0.00 0.00 0.00 4.79
2855 3018 3.262420 ACATTGTCTGTTATGAGCCGTC 58.738 45.455 0.00 0.00 32.90 4.79
2856 3019 3.262420 GACATTGTCTGTTATGAGCCGT 58.738 45.455 9.59 0.00 38.54 5.68
2857 3020 2.609459 GGACATTGTCTGTTATGAGCCG 59.391 50.000 16.02 0.00 38.54 5.52
2858 3021 3.878778 AGGACATTGTCTGTTATGAGCC 58.121 45.455 16.02 0.00 38.54 4.70
2859 3022 6.036517 CAGTAAGGACATTGTCTGTTATGAGC 59.963 42.308 16.02 4.11 38.54 4.26
2860 3023 6.036517 GCAGTAAGGACATTGTCTGTTATGAG 59.963 42.308 16.02 9.25 38.54 2.90
2861 3024 5.874810 GCAGTAAGGACATTGTCTGTTATGA 59.125 40.000 16.02 0.00 38.54 2.15
2862 3025 5.065218 GGCAGTAAGGACATTGTCTGTTATG 59.935 44.000 16.02 10.85 38.54 1.90
2863 3026 5.045578 AGGCAGTAAGGACATTGTCTGTTAT 60.046 40.000 16.02 2.13 38.54 1.89
2864 3027 4.286032 AGGCAGTAAGGACATTGTCTGTTA 59.714 41.667 16.02 11.18 38.54 2.41
2865 3028 3.073062 AGGCAGTAAGGACATTGTCTGTT 59.927 43.478 16.02 12.05 38.54 3.16
2866 3029 2.639839 AGGCAGTAAGGACATTGTCTGT 59.360 45.455 16.02 7.27 42.15 3.41
2867 3030 3.340814 AGGCAGTAAGGACATTGTCTG 57.659 47.619 16.02 7.55 32.47 3.51
2868 3031 3.119101 CGTAGGCAGTAAGGACATTGTCT 60.119 47.826 16.02 0.50 32.47 3.41
2869 3032 3.119245 TCGTAGGCAGTAAGGACATTGTC 60.119 47.826 8.34 8.34 0.00 3.18
2870 3033 2.829720 TCGTAGGCAGTAAGGACATTGT 59.170 45.455 0.00 0.00 0.00 2.71
2871 3034 3.119101 ACTCGTAGGCAGTAAGGACATTG 60.119 47.826 0.00 0.00 0.00 2.82
2872 3035 3.097614 ACTCGTAGGCAGTAAGGACATT 58.902 45.455 0.00 0.00 0.00 2.71
2873 3036 2.427453 CACTCGTAGGCAGTAAGGACAT 59.573 50.000 0.00 0.00 0.00 3.06
2874 3037 1.816835 CACTCGTAGGCAGTAAGGACA 59.183 52.381 0.00 0.00 0.00 4.02
2875 3038 1.817447 ACACTCGTAGGCAGTAAGGAC 59.183 52.381 0.00 0.00 0.00 3.85
2876 3039 2.211250 ACACTCGTAGGCAGTAAGGA 57.789 50.000 0.00 0.00 0.00 3.36
2877 3040 2.751259 TGTACACTCGTAGGCAGTAAGG 59.249 50.000 0.00 0.00 0.00 2.69
2878 3041 3.189910 TGTGTACACTCGTAGGCAGTAAG 59.810 47.826 25.60 0.00 0.00 2.34
2879 3042 3.148412 TGTGTACACTCGTAGGCAGTAA 58.852 45.455 25.60 0.00 0.00 2.24
2880 3043 2.781923 TGTGTACACTCGTAGGCAGTA 58.218 47.619 25.60 0.00 0.00 2.74
2881 3044 1.612676 TGTGTACACTCGTAGGCAGT 58.387 50.000 25.60 0.00 0.00 4.40
2882 3045 2.941453 ATGTGTACACTCGTAGGCAG 57.059 50.000 25.60 0.00 0.00 4.85
2883 3046 4.643334 AGATAATGTGTACACTCGTAGGCA 59.357 41.667 25.60 4.31 0.00 4.75
2884 3047 4.976731 CAGATAATGTGTACACTCGTAGGC 59.023 45.833 25.60 9.91 0.00 3.93
2885 3048 6.373186 TCAGATAATGTGTACACTCGTAGG 57.627 41.667 25.60 10.72 0.00 3.18
2886 3049 8.683550 TTTTCAGATAATGTGTACACTCGTAG 57.316 34.615 25.60 10.46 0.00 3.51
2887 3050 7.758076 CCTTTTCAGATAATGTGTACACTCGTA 59.242 37.037 25.60 15.02 0.00 3.43
2888 3051 6.590292 CCTTTTCAGATAATGTGTACACTCGT 59.410 38.462 25.60 13.44 0.00 4.18
2889 3052 6.811665 TCCTTTTCAGATAATGTGTACACTCG 59.188 38.462 25.60 11.49 0.00 4.18
2890 3053 8.547967 TTCCTTTTCAGATAATGTGTACACTC 57.452 34.615 25.60 15.05 0.00 3.51
2891 3054 8.375506 TCTTCCTTTTCAGATAATGTGTACACT 58.624 33.333 25.60 10.10 0.00 3.55
2892 3055 8.547967 TCTTCCTTTTCAGATAATGTGTACAC 57.452 34.615 19.36 19.36 0.00 2.90
2893 3056 9.567776 TTTCTTCCTTTTCAGATAATGTGTACA 57.432 29.630 0.00 0.00 0.00 2.90
2895 3058 9.231297 CCTTTCTTCCTTTTCAGATAATGTGTA 57.769 33.333 0.00 0.00 0.00 2.90
2896 3059 7.725844 ACCTTTCTTCCTTTTCAGATAATGTGT 59.274 33.333 0.00 0.00 0.00 3.72
2897 3060 8.115490 ACCTTTCTTCCTTTTCAGATAATGTG 57.885 34.615 0.00 0.00 0.00 3.21
2898 3061 9.807921 TTACCTTTCTTCCTTTTCAGATAATGT 57.192 29.630 0.00 0.00 0.00 2.71
2901 3064 8.793592 GCTTTACCTTTCTTCCTTTTCAGATAA 58.206 33.333 0.00 0.00 0.00 1.75
2902 3065 7.942341 TGCTTTACCTTTCTTCCTTTTCAGATA 59.058 33.333 0.00 0.00 0.00 1.98
2903 3066 6.777580 TGCTTTACCTTTCTTCCTTTTCAGAT 59.222 34.615 0.00 0.00 0.00 2.90
2904 3067 6.126409 TGCTTTACCTTTCTTCCTTTTCAGA 58.874 36.000 0.00 0.00 0.00 3.27
2905 3068 6.391227 TGCTTTACCTTTCTTCCTTTTCAG 57.609 37.500 0.00 0.00 0.00 3.02
2906 3069 5.301805 CCTGCTTTACCTTTCTTCCTTTTCA 59.698 40.000 0.00 0.00 0.00 2.69
2907 3070 5.535030 TCCTGCTTTACCTTTCTTCCTTTTC 59.465 40.000 0.00 0.00 0.00 2.29
2908 3071 5.454966 TCCTGCTTTACCTTTCTTCCTTTT 58.545 37.500 0.00 0.00 0.00 2.27
2909 3072 5.061721 TCCTGCTTTACCTTTCTTCCTTT 57.938 39.130 0.00 0.00 0.00 3.11
2910 3073 4.657013 CTCCTGCTTTACCTTTCTTCCTT 58.343 43.478 0.00 0.00 0.00 3.36
2911 3074 3.560239 GCTCCTGCTTTACCTTTCTTCCT 60.560 47.826 0.00 0.00 36.03 3.36
2912 3075 2.750166 GCTCCTGCTTTACCTTTCTTCC 59.250 50.000 0.00 0.00 36.03 3.46
2932 3095 4.027572 TGTCAAGTTTAACAGCACAAGC 57.972 40.909 0.00 0.00 42.56 4.01
2933 3096 4.977963 CCATGTCAAGTTTAACAGCACAAG 59.022 41.667 0.00 0.00 0.00 3.16
2934 3097 4.736168 GCCATGTCAAGTTTAACAGCACAA 60.736 41.667 0.00 0.00 0.00 3.33
2935 3098 3.243367 GCCATGTCAAGTTTAACAGCACA 60.243 43.478 0.00 0.00 0.00 4.57
2936 3099 3.004734 AGCCATGTCAAGTTTAACAGCAC 59.995 43.478 0.00 0.00 0.00 4.40
2937 3100 3.221771 AGCCATGTCAAGTTTAACAGCA 58.778 40.909 0.00 0.00 0.00 4.41
2938 3101 3.923017 AGCCATGTCAAGTTTAACAGC 57.077 42.857 0.00 0.00 0.00 4.40
2939 3102 5.858581 GCTTTAGCCATGTCAAGTTTAACAG 59.141 40.000 0.00 0.00 34.31 3.16
2940 3103 5.300539 TGCTTTAGCCATGTCAAGTTTAACA 59.699 36.000 0.00 0.00 41.18 2.41
2941 3104 5.768317 TGCTTTAGCCATGTCAAGTTTAAC 58.232 37.500 0.00 0.00 41.18 2.01
2942 3105 6.588719 ATGCTTTAGCCATGTCAAGTTTAA 57.411 33.333 0.00 0.00 41.18 1.52
2943 3106 7.555914 TCATATGCTTTAGCCATGTCAAGTTTA 59.444 33.333 0.00 0.00 41.18 2.01
2944 3107 6.377996 TCATATGCTTTAGCCATGTCAAGTTT 59.622 34.615 0.00 0.00 41.18 2.66
2945 3108 5.887598 TCATATGCTTTAGCCATGTCAAGTT 59.112 36.000 0.00 0.00 41.18 2.66
2946 3109 5.439721 TCATATGCTTTAGCCATGTCAAGT 58.560 37.500 0.00 0.00 41.18 3.16
2947 3110 6.570672 ATCATATGCTTTAGCCATGTCAAG 57.429 37.500 0.00 0.00 41.18 3.02
2948 3111 5.179929 CGATCATATGCTTTAGCCATGTCAA 59.820 40.000 0.00 0.00 41.18 3.18
2949 3112 4.692155 CGATCATATGCTTTAGCCATGTCA 59.308 41.667 0.00 0.00 41.18 3.58
2950 3113 4.931601 TCGATCATATGCTTTAGCCATGTC 59.068 41.667 0.00 8.39 41.18 3.06
2951 3114 4.898320 TCGATCATATGCTTTAGCCATGT 58.102 39.130 0.00 2.78 41.18 3.21
2952 3115 4.934001 ACTCGATCATATGCTTTAGCCATG 59.066 41.667 0.00 3.59 41.18 3.66
2953 3116 5.157940 ACTCGATCATATGCTTTAGCCAT 57.842 39.130 0.00 0.00 41.18 4.40
2954 3117 4.607293 ACTCGATCATATGCTTTAGCCA 57.393 40.909 0.00 0.00 41.18 4.75
2955 3118 4.991056 TCAACTCGATCATATGCTTTAGCC 59.009 41.667 0.00 0.00 41.18 3.93
2956 3119 6.530913 TTCAACTCGATCATATGCTTTAGC 57.469 37.500 0.00 0.00 42.50 3.09
2957 3120 7.172190 ACCATTCAACTCGATCATATGCTTTAG 59.828 37.037 0.00 0.00 0.00 1.85
2958 3121 6.992123 ACCATTCAACTCGATCATATGCTTTA 59.008 34.615 0.00 0.00 0.00 1.85
2959 3122 5.824624 ACCATTCAACTCGATCATATGCTTT 59.175 36.000 0.00 0.00 0.00 3.51
2960 3123 5.371526 ACCATTCAACTCGATCATATGCTT 58.628 37.500 0.00 0.00 0.00 3.91
2961 3124 4.965814 ACCATTCAACTCGATCATATGCT 58.034 39.130 0.00 0.00 0.00 3.79
2962 3125 4.143242 CGACCATTCAACTCGATCATATGC 60.143 45.833 0.00 0.00 0.00 3.14
2963 3126 4.984785 ACGACCATTCAACTCGATCATATG 59.015 41.667 0.00 0.00 0.00 1.78
2964 3127 5.201713 ACGACCATTCAACTCGATCATAT 57.798 39.130 0.00 0.00 0.00 1.78
2965 3128 4.649088 ACGACCATTCAACTCGATCATA 57.351 40.909 0.00 0.00 0.00 2.15
2966 3129 3.526931 ACGACCATTCAACTCGATCAT 57.473 42.857 0.00 0.00 0.00 2.45
2967 3130 3.442625 AGTACGACCATTCAACTCGATCA 59.557 43.478 0.00 0.00 0.00 2.92
2968 3131 4.030134 AGTACGACCATTCAACTCGATC 57.970 45.455 0.00 0.00 0.00 3.69
2969 3132 4.082408 TCAAGTACGACCATTCAACTCGAT 60.082 41.667 0.00 0.00 0.00 3.59
2970 3133 3.253921 TCAAGTACGACCATTCAACTCGA 59.746 43.478 0.00 0.00 0.00 4.04
2971 3134 3.571571 TCAAGTACGACCATTCAACTCG 58.428 45.455 0.00 0.00 0.00 4.18
2972 3135 3.927142 CCTCAAGTACGACCATTCAACTC 59.073 47.826 0.00 0.00 0.00 3.01
2973 3136 3.306780 CCCTCAAGTACGACCATTCAACT 60.307 47.826 0.00 0.00 0.00 3.16
2974 3137 3.000727 CCCTCAAGTACGACCATTCAAC 58.999 50.000 0.00 0.00 0.00 3.18
2975 3138 2.614481 GCCCTCAAGTACGACCATTCAA 60.614 50.000 0.00 0.00 0.00 2.69
2976 3139 1.066430 GCCCTCAAGTACGACCATTCA 60.066 52.381 0.00 0.00 0.00 2.57
2977 3140 1.653151 GCCCTCAAGTACGACCATTC 58.347 55.000 0.00 0.00 0.00 2.67
2978 3141 0.108329 CGCCCTCAAGTACGACCATT 60.108 55.000 0.00 0.00 0.00 3.16
2979 3142 1.515954 CGCCCTCAAGTACGACCAT 59.484 57.895 0.00 0.00 0.00 3.55
2980 3143 2.642254 CCGCCCTCAAGTACGACCA 61.642 63.158 0.00 0.00 0.00 4.02
2981 3144 2.183555 CCGCCCTCAAGTACGACC 59.816 66.667 0.00 0.00 0.00 4.79
2982 3145 1.153881 GACCGCCCTCAAGTACGAC 60.154 63.158 0.00 0.00 0.00 4.34
2983 3146 0.968901 ATGACCGCCCTCAAGTACGA 60.969 55.000 0.00 0.00 0.00 3.43
2984 3147 0.806102 CATGACCGCCCTCAAGTACG 60.806 60.000 0.00 0.00 0.00 3.67
2985 3148 0.462047 CCATGACCGCCCTCAAGTAC 60.462 60.000 0.00 0.00 0.00 2.73
2986 3149 1.904771 CCATGACCGCCCTCAAGTA 59.095 57.895 0.00 0.00 0.00 2.24
2987 3150 2.671070 CCATGACCGCCCTCAAGT 59.329 61.111 0.00 0.00 0.00 3.16
2988 3151 2.825836 GCCATGACCGCCCTCAAG 60.826 66.667 0.00 0.00 0.00 3.02
2989 3152 4.424711 GGCCATGACCGCCCTCAA 62.425 66.667 0.00 0.00 40.78 3.02
2991 3154 4.424711 TTGGCCATGACCGCCCTC 62.425 66.667 6.09 0.00 46.48 4.30
2992 3155 4.431131 CTTGGCCATGACCGCCCT 62.431 66.667 13.33 0.00 46.48 5.19
2995 3158 3.064324 AAGCTTGGCCATGACCGC 61.064 61.111 22.21 12.26 0.00 5.68
2996 3159 2.703798 CCAAGCTTGGCCATGACCG 61.704 63.158 31.70 5.87 42.21 4.79
2997 3160 3.291611 CCAAGCTTGGCCATGACC 58.708 61.111 31.70 5.53 42.21 4.02
3006 3169 4.701956 AATATCCGTGAAACCAAGCTTG 57.298 40.909 19.93 19.93 0.00 4.01
3007 3170 4.082245 CCAAATATCCGTGAAACCAAGCTT 60.082 41.667 0.00 0.00 0.00 3.74
3008 3171 3.443681 CCAAATATCCGTGAAACCAAGCT 59.556 43.478 0.00 0.00 0.00 3.74
3009 3172 3.442273 TCCAAATATCCGTGAAACCAAGC 59.558 43.478 0.00 0.00 0.00 4.01
3010 3173 5.835113 ATCCAAATATCCGTGAAACCAAG 57.165 39.130 0.00 0.00 0.00 3.61
3011 3174 7.704578 TTAATCCAAATATCCGTGAAACCAA 57.295 32.000 0.00 0.00 0.00 3.67
3012 3175 7.254966 CGATTAATCCAAATATCCGTGAAACCA 60.255 37.037 9.87 0.00 0.00 3.67
3013 3176 7.041644 TCGATTAATCCAAATATCCGTGAAACC 60.042 37.037 9.87 0.00 0.00 3.27
3014 3177 7.857569 TCGATTAATCCAAATATCCGTGAAAC 58.142 34.615 9.87 0.00 0.00 2.78
3015 3178 7.713507 ACTCGATTAATCCAAATATCCGTGAAA 59.286 33.333 9.87 0.00 0.00 2.69
3016 3179 7.214381 ACTCGATTAATCCAAATATCCGTGAA 58.786 34.615 9.87 0.00 0.00 3.18
3017 3180 6.755206 ACTCGATTAATCCAAATATCCGTGA 58.245 36.000 9.87 0.00 0.00 4.35
3018 3181 8.528917 TTACTCGATTAATCCAAATATCCGTG 57.471 34.615 9.87 0.00 0.00 4.94
3019 3182 9.151471 CATTACTCGATTAATCCAAATATCCGT 57.849 33.333 9.87 0.00 0.00 4.69
3020 3183 9.151471 ACATTACTCGATTAATCCAAATATCCG 57.849 33.333 9.87 0.00 0.00 4.18
3022 3185 9.760660 GCACATTACTCGATTAATCCAAATATC 57.239 33.333 9.87 0.00 0.00 1.63
3023 3186 9.507329 AGCACATTACTCGATTAATCCAAATAT 57.493 29.630 9.87 0.00 0.00 1.28
3024 3187 8.773645 CAGCACATTACTCGATTAATCCAAATA 58.226 33.333 9.87 0.00 0.00 1.40
3025 3188 7.283127 ACAGCACATTACTCGATTAATCCAAAT 59.717 33.333 9.87 2.45 0.00 2.32
3026 3189 6.597672 ACAGCACATTACTCGATTAATCCAAA 59.402 34.615 9.87 0.25 0.00 3.28
3027 3190 6.037062 CACAGCACATTACTCGATTAATCCAA 59.963 38.462 9.87 0.24 0.00 3.53
3028 3191 5.523552 CACAGCACATTACTCGATTAATCCA 59.476 40.000 9.87 0.00 0.00 3.41
3029 3192 5.523916 ACACAGCACATTACTCGATTAATCC 59.476 40.000 9.87 0.00 0.00 3.01
3030 3193 6.414079 CACACAGCACATTACTCGATTAATC 58.586 40.000 5.30 5.30 0.00 1.75
3031 3194 5.294306 CCACACAGCACATTACTCGATTAAT 59.706 40.000 2.39 2.39 0.00 1.40
3032 3195 4.629634 CCACACAGCACATTACTCGATTAA 59.370 41.667 0.00 0.00 0.00 1.40
3033 3196 4.081917 TCCACACAGCACATTACTCGATTA 60.082 41.667 0.00 0.00 0.00 1.75
3034 3197 3.002791 CCACACAGCACATTACTCGATT 58.997 45.455 0.00 0.00 0.00 3.34
3035 3198 2.233676 TCCACACAGCACATTACTCGAT 59.766 45.455 0.00 0.00 0.00 3.59
3036 3199 1.616374 TCCACACAGCACATTACTCGA 59.384 47.619 0.00 0.00 0.00 4.04
3037 3200 2.078849 TCCACACAGCACATTACTCG 57.921 50.000 0.00 0.00 0.00 4.18
3038 3201 3.363970 CGTTTCCACACAGCACATTACTC 60.364 47.826 0.00 0.00 0.00 2.59
3039 3202 2.548057 CGTTTCCACACAGCACATTACT 59.452 45.455 0.00 0.00 0.00 2.24
3040 3203 2.350388 CCGTTTCCACACAGCACATTAC 60.350 50.000 0.00 0.00 0.00 1.89
3041 3204 1.876799 CCGTTTCCACACAGCACATTA 59.123 47.619 0.00 0.00 0.00 1.90
3042 3205 0.667993 CCGTTTCCACACAGCACATT 59.332 50.000 0.00 0.00 0.00 2.71
3043 3206 0.465460 ACCGTTTCCACACAGCACAT 60.465 50.000 0.00 0.00 0.00 3.21
3044 3207 1.078072 ACCGTTTCCACACAGCACA 60.078 52.632 0.00 0.00 0.00 4.57
3045 3208 1.355210 CACCGTTTCCACACAGCAC 59.645 57.895 0.00 0.00 0.00 4.40
3046 3209 1.078072 ACACCGTTTCCACACAGCA 60.078 52.632 0.00 0.00 0.00 4.41
3047 3210 1.647084 GACACCGTTTCCACACAGC 59.353 57.895 0.00 0.00 0.00 4.40
3048 3211 1.931551 CGACACCGTTTCCACACAG 59.068 57.895 0.00 0.00 0.00 3.66
3049 3212 4.112086 CGACACCGTTTCCACACA 57.888 55.556 0.00 0.00 0.00 3.72
3059 3222 1.787155 CTCTGACTGAAAACGACACCG 59.213 52.381 0.00 0.00 42.50 4.94
3060 3223 2.822764 ACTCTGACTGAAAACGACACC 58.177 47.619 0.00 0.00 0.00 4.16
3061 3224 5.961395 TTTACTCTGACTGAAAACGACAC 57.039 39.130 0.00 0.00 0.00 3.67
3062 3225 5.465390 CCATTTACTCTGACTGAAAACGACA 59.535 40.000 0.00 0.00 0.00 4.35
3063 3226 5.107065 CCCATTTACTCTGACTGAAAACGAC 60.107 44.000 0.00 0.00 0.00 4.34
3064 3227 4.994852 CCCATTTACTCTGACTGAAAACGA 59.005 41.667 0.00 0.00 0.00 3.85
3065 3228 4.154195 CCCCATTTACTCTGACTGAAAACG 59.846 45.833 0.00 0.00 0.00 3.60
3066 3229 5.048713 CACCCCATTTACTCTGACTGAAAAC 60.049 44.000 0.00 0.00 0.00 2.43
3067 3230 5.070001 CACCCCATTTACTCTGACTGAAAA 58.930 41.667 0.00 0.00 0.00 2.29
3068 3231 4.651778 CACCCCATTTACTCTGACTGAAA 58.348 43.478 0.00 0.00 0.00 2.69
3069 3232 3.559171 GCACCCCATTTACTCTGACTGAA 60.559 47.826 0.00 0.00 0.00 3.02
3070 3233 2.027192 GCACCCCATTTACTCTGACTGA 60.027 50.000 0.00 0.00 0.00 3.41
3071 3234 2.026822 AGCACCCCATTTACTCTGACTG 60.027 50.000 0.00 0.00 0.00 3.51
3072 3235 2.237392 GAGCACCCCATTTACTCTGACT 59.763 50.000 0.00 0.00 0.00 3.41
3073 3236 2.237392 AGAGCACCCCATTTACTCTGAC 59.763 50.000 0.00 0.00 36.39 3.51
3074 3237 2.501723 GAGAGCACCCCATTTACTCTGA 59.498 50.000 0.00 0.00 37.82 3.27
3075 3238 2.739932 CGAGAGCACCCCATTTACTCTG 60.740 54.545 0.00 0.00 37.82 3.35
3076 3239 1.482593 CGAGAGCACCCCATTTACTCT 59.517 52.381 0.00 0.00 40.33 3.24
3077 3240 1.473434 CCGAGAGCACCCCATTTACTC 60.473 57.143 0.00 0.00 0.00 2.59
3078 3241 0.541863 CCGAGAGCACCCCATTTACT 59.458 55.000 0.00 0.00 0.00 2.24
3079 3242 0.539986 TCCGAGAGCACCCCATTTAC 59.460 55.000 0.00 0.00 0.00 2.01
3080 3243 1.281419 TTCCGAGAGCACCCCATTTA 58.719 50.000 0.00 0.00 0.00 1.40
3081 3244 0.625849 ATTCCGAGAGCACCCCATTT 59.374 50.000 0.00 0.00 0.00 2.32
3082 3245 0.625849 AATTCCGAGAGCACCCCATT 59.374 50.000 0.00 0.00 0.00 3.16
3083 3246 0.625849 AAATTCCGAGAGCACCCCAT 59.374 50.000 0.00 0.00 0.00 4.00
3084 3247 0.404040 AAAATTCCGAGAGCACCCCA 59.596 50.000 0.00 0.00 0.00 4.96
3085 3248 1.545841 AAAAATTCCGAGAGCACCCC 58.454 50.000 0.00 0.00 0.00 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.