Multiple sequence alignment - TraesCS3B01G463200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G463200 chr3B 100.000 4171 0 0 1 4171 706030096 706025926 0.000000e+00 7703.0
1 TraesCS3B01G463200 chr3B 92.982 2009 108 20 845 2843 706182530 706184515 0.000000e+00 2898.0
2 TraesCS3B01G463200 chr3B 88.378 1609 140 21 1191 2767 706754685 706756278 0.000000e+00 1892.0
3 TraesCS3B01G463200 chr3B 91.512 1296 87 11 1547 2841 706711680 706712953 0.000000e+00 1762.0
4 TraesCS3B01G463200 chr3B 85.390 1102 115 26 1696 2767 706185586 706186671 0.000000e+00 1101.0
5 TraesCS3B01G463200 chr3B 89.948 388 39 0 2456 2843 706560939 706561326 6.230000e-138 501.0
6 TraesCS3B01G463200 chr3B 88.127 379 45 0 2457 2835 706603935 706604313 6.360000e-123 451.0
7 TraesCS3B01G463200 chr3B 81.758 455 63 5 3627 4068 705997280 705996833 3.060000e-96 363.0
8 TraesCS3B01G463200 chr3B 83.200 125 18 3 3080 3203 706756788 706756910 1.230000e-20 111.0
9 TraesCS3B01G463200 chr3B 87.342 79 9 1 1 79 705998086 705998163 5.740000e-14 89.8
10 TraesCS3B01G463200 chr3D 93.009 2918 144 17 606 3489 533960680 533957789 0.000000e+00 4204.0
11 TraesCS3B01G463200 chr3D 92.105 2014 132 10 845 2843 534115259 534117260 0.000000e+00 2813.0
12 TraesCS3B01G463200 chr3D 86.902 1901 184 39 912 2767 535399666 535401546 0.000000e+00 2071.0
13 TraesCS3B01G463200 chr3D 89.302 430 27 4 3482 3893 533957734 533957306 4.780000e-144 521.0
14 TraesCS3B01G463200 chr3D 87.927 381 45 1 146 526 533961332 533960953 8.230000e-122 448.0
15 TraesCS3B01G463200 chr3D 87.468 391 46 1 2456 2843 534762950 534763340 8.230000e-122 448.0
16 TraesCS3B01G463200 chr3D 83.709 399 52 9 3072 3467 534117868 534118256 8.520000e-97 364.0
17 TraesCS3B01G463200 chr3D 82.432 370 41 7 3703 4068 533921752 533921403 6.780000e-78 302.0
18 TraesCS3B01G463200 chr3D 95.062 162 8 0 1 162 534103348 534103187 5.350000e-64 255.0
19 TraesCS3B01G463200 chr3D 97.333 75 2 0 4095 4169 533937591 533937517 1.220000e-25 128.0
20 TraesCS3B01G463200 chr3D 96.104 77 3 0 4095 4171 533926696 533926620 4.380000e-25 126.0
21 TraesCS3B01G463200 chr3D 95.745 47 2 0 8 54 533922798 533922844 4.470000e-10 76.8
22 TraesCS3B01G463200 chr4D 83.104 1456 205 26 1162 2594 98015643 98014206 0.000000e+00 1288.0
23 TraesCS3B01G463200 chr4D 82.665 998 137 19 1596 2591 374041175 374040212 0.000000e+00 852.0
24 TraesCS3B01G463200 chr4B 82.490 1462 211 27 1162 2594 139593885 139592440 0.000000e+00 1240.0
25 TraesCS3B01G463200 chr4B 82.080 1423 204 31 1180 2594 460156827 460155448 0.000000e+00 1168.0
26 TraesCS3B01G463200 chr4B 80.932 1437 219 43 1177 2599 535331716 535330321 0.000000e+00 1085.0
27 TraesCS3B01G463200 chr4A 82.353 1462 214 23 1162 2594 478191186 478192632 0.000000e+00 1230.0
28 TraesCS3B01G463200 chr4A 80.000 1405 236 24 1187 2579 90439257 90440628 0.000000e+00 996.0
29 TraesCS3B01G463200 chr3A 86.166 1106 117 22 1680 2767 670545601 670546688 0.000000e+00 1162.0
30 TraesCS3B01G463200 chr3A 83.439 791 87 23 912 1680 670535484 670536252 0.000000e+00 695.0
31 TraesCS3B01G463200 chr3A 83.371 445 62 7 3627 4068 669768494 669768059 6.500000e-108 401.0
32 TraesCS3B01G463200 chr5A 79.630 108 19 3 701 808 598074127 598074023 1.610000e-09 75.0
33 TraesCS3B01G463200 chrUn 100.000 28 0 0 3269 3296 226754497 226754524 8.000000e-03 52.8
34 TraesCS3B01G463200 chrUn 100.000 28 0 0 3269 3296 300244438 300244465 8.000000e-03 52.8
35 TraesCS3B01G463200 chrUn 100.000 28 0 0 3269 3296 300249150 300249177 8.000000e-03 52.8
36 TraesCS3B01G463200 chr6B 100.000 28 0 0 3269 3296 73666355 73666382 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G463200 chr3B 706025926 706030096 4170 True 7703.000000 7703 100.000000 1 4171 1 chr3B.!!$R2 4170
1 TraesCS3B01G463200 chr3B 706182530 706186671 4141 False 1999.500000 2898 89.186000 845 2843 2 chr3B.!!$F5 1998
2 TraesCS3B01G463200 chr3B 706711680 706712953 1273 False 1762.000000 1762 91.512000 1547 2841 1 chr3B.!!$F4 1294
3 TraesCS3B01G463200 chr3B 706754685 706756910 2225 False 1001.500000 1892 85.789000 1191 3203 2 chr3B.!!$F6 2012
4 TraesCS3B01G463200 chr3D 535399666 535401546 1880 False 2071.000000 2071 86.902000 912 2767 1 chr3D.!!$F3 1855
5 TraesCS3B01G463200 chr3D 533957306 533961332 4026 True 1724.333333 4204 90.079333 146 3893 3 chr3D.!!$R5 3747
6 TraesCS3B01G463200 chr3D 534115259 534118256 2997 False 1588.500000 2813 87.907000 845 3467 2 chr3D.!!$F4 2622
7 TraesCS3B01G463200 chr4D 98014206 98015643 1437 True 1288.000000 1288 83.104000 1162 2594 1 chr4D.!!$R1 1432
8 TraesCS3B01G463200 chr4D 374040212 374041175 963 True 852.000000 852 82.665000 1596 2591 1 chr4D.!!$R2 995
9 TraesCS3B01G463200 chr4B 139592440 139593885 1445 True 1240.000000 1240 82.490000 1162 2594 1 chr4B.!!$R1 1432
10 TraesCS3B01G463200 chr4B 460155448 460156827 1379 True 1168.000000 1168 82.080000 1180 2594 1 chr4B.!!$R2 1414
11 TraesCS3B01G463200 chr4B 535330321 535331716 1395 True 1085.000000 1085 80.932000 1177 2599 1 chr4B.!!$R3 1422
12 TraesCS3B01G463200 chr4A 478191186 478192632 1446 False 1230.000000 1230 82.353000 1162 2594 1 chr4A.!!$F2 1432
13 TraesCS3B01G463200 chr4A 90439257 90440628 1371 False 996.000000 996 80.000000 1187 2579 1 chr4A.!!$F1 1392
14 TraesCS3B01G463200 chr3A 670545601 670546688 1087 False 1162.000000 1162 86.166000 1680 2767 1 chr3A.!!$F2 1087
15 TraesCS3B01G463200 chr3A 670535484 670536252 768 False 695.000000 695 83.439000 912 1680 1 chr3A.!!$F1 768

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
552 553 0.034186 GCTCCACACCATTGGATCCA 60.034 55.0 11.44 11.44 44.97 3.41 F
654 868 0.179073 CCATCAGTGTCGATGTCCCC 60.179 60.0 0.00 0.00 41.06 4.81 F
2603 2952 0.617935 TTCTGTTGCCCGATGATCCA 59.382 50.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2491 2840 1.304134 AAATCCCGGACAACCAGCC 60.304 57.895 0.73 0.0 35.59 4.85 R
2625 2974 2.075566 TGTGCCTCAGGGACACCAA 61.076 57.895 15.31 0.0 46.66 3.67 R
3967 4826 0.116541 TCGTTCCTTCTCCCCCTTCT 59.883 55.000 0.00 0.0 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.287050 GCTCCAATTTTTAGCAATTCTTCTG 57.713 36.000 0.00 0.00 36.26 3.02
25 26 7.092716 GCTCCAATTTTTAGCAATTCTTCTGA 58.907 34.615 0.00 0.00 36.26 3.27
26 27 7.062722 GCTCCAATTTTTAGCAATTCTTCTGAC 59.937 37.037 0.00 0.00 36.26 3.51
27 28 7.378181 TCCAATTTTTAGCAATTCTTCTGACC 58.622 34.615 0.00 0.00 0.00 4.02
28 29 7.015098 TCCAATTTTTAGCAATTCTTCTGACCA 59.985 33.333 0.00 0.00 0.00 4.02
29 30 7.656948 CCAATTTTTAGCAATTCTTCTGACCAA 59.343 33.333 0.00 0.00 0.00 3.67
30 31 9.044150 CAATTTTTAGCAATTCTTCTGACCAAA 57.956 29.630 0.00 0.00 0.00 3.28
31 32 8.593492 ATTTTTAGCAATTCTTCTGACCAAAC 57.407 30.769 0.00 0.00 0.00 2.93
32 33 6.707440 TTTAGCAATTCTTCTGACCAAACA 57.293 33.333 0.00 0.00 0.00 2.83
33 34 4.574599 AGCAATTCTTCTGACCAAACAC 57.425 40.909 0.00 0.00 0.00 3.32
34 35 4.210331 AGCAATTCTTCTGACCAAACACT 58.790 39.130 0.00 0.00 0.00 3.55
35 36 5.376625 AGCAATTCTTCTGACCAAACACTA 58.623 37.500 0.00 0.00 0.00 2.74
36 37 5.471456 AGCAATTCTTCTGACCAAACACTAG 59.529 40.000 0.00 0.00 0.00 2.57
37 38 5.693814 CAATTCTTCTGACCAAACACTAGC 58.306 41.667 0.00 0.00 0.00 3.42
38 39 3.402628 TCTTCTGACCAAACACTAGCC 57.597 47.619 0.00 0.00 0.00 3.93
39 40 2.703536 TCTTCTGACCAAACACTAGCCA 59.296 45.455 0.00 0.00 0.00 4.75
40 41 3.135712 TCTTCTGACCAAACACTAGCCAA 59.864 43.478 0.00 0.00 0.00 4.52
41 42 3.569194 TCTGACCAAACACTAGCCAAA 57.431 42.857 0.00 0.00 0.00 3.28
42 43 3.476552 TCTGACCAAACACTAGCCAAAG 58.523 45.455 0.00 0.00 0.00 2.77
43 44 3.118038 TCTGACCAAACACTAGCCAAAGT 60.118 43.478 0.00 0.00 0.00 2.66
44 45 3.626930 TGACCAAACACTAGCCAAAGTT 58.373 40.909 0.00 0.00 0.00 2.66
45 46 4.020543 TGACCAAACACTAGCCAAAGTTT 58.979 39.130 0.00 0.00 34.78 2.66
46 47 4.097286 TGACCAAACACTAGCCAAAGTTTC 59.903 41.667 0.00 0.00 32.34 2.78
47 48 3.383505 ACCAAACACTAGCCAAAGTTTCC 59.616 43.478 0.00 0.00 32.34 3.13
48 49 3.383185 CCAAACACTAGCCAAAGTTTCCA 59.617 43.478 0.00 0.00 32.34 3.53
49 50 4.142049 CCAAACACTAGCCAAAGTTTCCAA 60.142 41.667 0.00 0.00 32.34 3.53
50 51 5.415221 CAAACACTAGCCAAAGTTTCCAAA 58.585 37.500 0.00 0.00 32.34 3.28
51 52 5.869649 AACACTAGCCAAAGTTTCCAAAT 57.130 34.783 0.00 0.00 0.00 2.32
52 53 5.200368 ACACTAGCCAAAGTTTCCAAATG 57.800 39.130 0.00 0.00 0.00 2.32
53 54 4.649218 ACACTAGCCAAAGTTTCCAAATGT 59.351 37.500 0.00 0.00 0.00 2.71
54 55 5.128663 ACACTAGCCAAAGTTTCCAAATGTT 59.871 36.000 0.00 0.00 0.00 2.71
55 56 5.463061 CACTAGCCAAAGTTTCCAAATGTTG 59.537 40.000 0.00 0.00 0.00 3.33
66 67 3.090952 CCAAATGTTGGCGAGTTTTGA 57.909 42.857 9.74 0.00 45.17 2.69
67 68 3.052036 CCAAATGTTGGCGAGTTTTGAG 58.948 45.455 9.74 0.03 45.17 3.02
68 69 2.422276 AATGTTGGCGAGTTTTGAGC 57.578 45.000 0.00 0.00 0.00 4.26
69 70 1.609208 ATGTTGGCGAGTTTTGAGCT 58.391 45.000 0.00 0.00 0.00 4.09
70 71 1.388547 TGTTGGCGAGTTTTGAGCTT 58.611 45.000 0.00 0.00 0.00 3.74
71 72 1.748493 TGTTGGCGAGTTTTGAGCTTT 59.252 42.857 0.00 0.00 0.00 3.51
72 73 2.223479 TGTTGGCGAGTTTTGAGCTTTC 60.223 45.455 0.00 0.00 0.00 2.62
73 74 0.951558 TGGCGAGTTTTGAGCTTTCC 59.048 50.000 0.00 0.00 0.00 3.13
74 75 0.110192 GGCGAGTTTTGAGCTTTCCG 60.110 55.000 0.00 0.00 0.00 4.30
75 76 0.865769 GCGAGTTTTGAGCTTTCCGA 59.134 50.000 0.00 0.00 0.00 4.55
76 77 1.263217 GCGAGTTTTGAGCTTTCCGAA 59.737 47.619 0.00 0.00 0.00 4.30
77 78 2.286772 GCGAGTTTTGAGCTTTCCGAAA 60.287 45.455 0.00 0.00 0.00 3.46
78 79 3.609409 GCGAGTTTTGAGCTTTCCGAAAT 60.609 43.478 0.00 0.00 0.00 2.17
79 80 4.537015 CGAGTTTTGAGCTTTCCGAAATT 58.463 39.130 0.00 0.00 0.00 1.82
80 81 4.976116 CGAGTTTTGAGCTTTCCGAAATTT 59.024 37.500 0.00 0.00 0.00 1.82
81 82 5.458779 CGAGTTTTGAGCTTTCCGAAATTTT 59.541 36.000 0.00 0.00 0.00 1.82
82 83 6.635239 CGAGTTTTGAGCTTTCCGAAATTTTA 59.365 34.615 0.00 0.00 0.00 1.52
83 84 7.149128 CGAGTTTTGAGCTTTCCGAAATTTTAG 60.149 37.037 0.00 0.00 0.00 1.85
84 85 6.420903 AGTTTTGAGCTTTCCGAAATTTTAGC 59.579 34.615 0.00 0.00 0.00 3.09
85 86 5.705609 TTGAGCTTTCCGAAATTTTAGCT 57.294 34.783 4.30 4.30 41.31 3.32
86 87 5.705609 TGAGCTTTCCGAAATTTTAGCTT 57.294 34.783 5.88 0.00 38.94 3.74
87 88 5.460646 TGAGCTTTCCGAAATTTTAGCTTG 58.539 37.500 5.88 0.00 38.94 4.01
88 89 5.009610 TGAGCTTTCCGAAATTTTAGCTTGT 59.990 36.000 5.88 0.00 38.94 3.16
89 90 5.222631 AGCTTTCCGAAATTTTAGCTTGTG 58.777 37.500 0.00 0.00 35.59 3.33
90 91 4.143326 GCTTTCCGAAATTTTAGCTTGTGC 60.143 41.667 0.00 0.00 40.05 4.57
115 116 2.893671 AAAAACCGGCATGCGAAAC 58.106 47.368 12.44 0.00 0.00 2.78
116 117 0.598942 AAAAACCGGCATGCGAAACC 60.599 50.000 12.44 0.00 0.00 3.27
117 118 1.739338 AAAACCGGCATGCGAAACCA 61.739 50.000 12.44 0.00 0.00 3.67
118 119 1.739338 AAACCGGCATGCGAAACCAA 61.739 50.000 12.44 0.00 0.00 3.67
119 120 2.141122 AACCGGCATGCGAAACCAAG 62.141 55.000 12.44 0.00 0.00 3.61
120 121 2.504681 CGGCATGCGAAACCAAGC 60.505 61.111 12.44 0.00 0.00 4.01
125 126 2.203337 TGCGAAACCAAGCAGCCT 60.203 55.556 0.00 0.00 38.59 4.58
126 127 2.260869 TGCGAAACCAAGCAGCCTC 61.261 57.895 0.00 0.00 38.59 4.70
127 128 1.968540 GCGAAACCAAGCAGCCTCT 60.969 57.895 0.00 0.00 0.00 3.69
128 129 0.673644 GCGAAACCAAGCAGCCTCTA 60.674 55.000 0.00 0.00 0.00 2.43
129 130 1.808411 CGAAACCAAGCAGCCTCTAA 58.192 50.000 0.00 0.00 0.00 2.10
130 131 2.151202 CGAAACCAAGCAGCCTCTAAA 58.849 47.619 0.00 0.00 0.00 1.85
131 132 2.749621 CGAAACCAAGCAGCCTCTAAAT 59.250 45.455 0.00 0.00 0.00 1.40
132 133 3.181506 CGAAACCAAGCAGCCTCTAAATC 60.182 47.826 0.00 0.00 0.00 2.17
133 134 2.426842 ACCAAGCAGCCTCTAAATCC 57.573 50.000 0.00 0.00 0.00 3.01
134 135 1.064389 ACCAAGCAGCCTCTAAATCCC 60.064 52.381 0.00 0.00 0.00 3.85
135 136 1.064463 CCAAGCAGCCTCTAAATCCCA 60.064 52.381 0.00 0.00 0.00 4.37
136 137 2.295885 CAAGCAGCCTCTAAATCCCAG 58.704 52.381 0.00 0.00 0.00 4.45
137 138 0.842635 AGCAGCCTCTAAATCCCAGG 59.157 55.000 0.00 0.00 0.00 4.45
138 139 0.839946 GCAGCCTCTAAATCCCAGGA 59.160 55.000 0.00 0.00 0.00 3.86
139 140 1.475930 GCAGCCTCTAAATCCCAGGAC 60.476 57.143 0.00 0.00 0.00 3.85
140 141 2.122768 CAGCCTCTAAATCCCAGGACT 58.877 52.381 0.00 0.00 0.00 3.85
141 142 2.122768 AGCCTCTAAATCCCAGGACTG 58.877 52.381 0.00 0.00 0.00 3.51
142 143 2.119495 GCCTCTAAATCCCAGGACTGA 58.881 52.381 0.00 0.00 0.00 3.41
143 144 2.103941 GCCTCTAAATCCCAGGACTGAG 59.896 54.545 0.00 0.00 0.00 3.35
144 145 3.647636 CCTCTAAATCCCAGGACTGAGA 58.352 50.000 0.00 0.00 0.00 3.27
156 157 5.510520 CCCAGGACTGAGATATACAAGAAGC 60.511 48.000 0.00 0.00 0.00 3.86
163 164 9.243637 GACTGAGATATACAAGAAGCTTAGTTG 57.756 37.037 16.10 16.10 0.00 3.16
164 165 8.754080 ACTGAGATATACAAGAAGCTTAGTTGT 58.246 33.333 23.27 23.27 38.04 3.32
170 171 5.036117 ACAAGAAGCTTAGTTGTCTGGAA 57.964 39.130 17.17 0.00 27.96 3.53
171 172 5.625150 ACAAGAAGCTTAGTTGTCTGGAAT 58.375 37.500 17.17 0.00 27.96 3.01
184 185 1.879380 TCTGGAATGCTTGGTGAAACG 59.121 47.619 0.00 0.00 38.12 3.60
188 189 2.749621 GGAATGCTTGGTGAAACGATCT 59.250 45.455 0.00 0.00 38.12 2.75
190 191 1.428448 TGCTTGGTGAAACGATCTCG 58.572 50.000 0.00 0.00 46.33 4.04
205 206 1.561643 TCTCGCAGGATCCTTGAAGT 58.438 50.000 13.00 0.00 0.00 3.01
206 207 1.478510 TCTCGCAGGATCCTTGAAGTC 59.521 52.381 13.00 0.00 0.00 3.01
216 217 0.514691 CCTTGAAGTCGTGCTCAAGC 59.485 55.000 13.89 0.00 38.47 4.01
256 257 1.995626 CCTGTGTGTAGGGAGGGGG 60.996 68.421 0.00 0.00 34.06 5.40
264 265 1.046204 GTAGGGAGGGGGAACATACG 58.954 60.000 0.00 0.00 0.00 3.06
266 267 2.449450 GGGAGGGGGAACATACGGG 61.449 68.421 0.00 0.00 0.00 5.28
268 269 3.456105 GAGGGGGAACATACGGGCG 62.456 68.421 0.00 0.00 0.00 6.13
274 275 1.447140 GAACATACGGGCGTGCTCA 60.447 57.895 0.00 0.00 0.00 4.26
303 304 0.684479 GGAGAAATTGGGCCACCTCC 60.684 60.000 20.59 20.59 37.76 4.30
304 305 0.684479 GAGAAATTGGGCCACCTCCC 60.684 60.000 5.23 0.00 46.73 4.30
314 315 2.579201 CACCTCCCGTCGATTGCT 59.421 61.111 0.00 0.00 0.00 3.91
316 317 0.673644 CACCTCCCGTCGATTGCTTT 60.674 55.000 0.00 0.00 0.00 3.51
334 335 4.023980 GCTTTGCCTTATTTACCCTCCTT 58.976 43.478 0.00 0.00 0.00 3.36
337 338 5.466127 TTGCCTTATTTACCCTCCTTCAT 57.534 39.130 0.00 0.00 0.00 2.57
344 345 7.202130 CCTTATTTACCCTCCTTCATCTCATCA 60.202 40.741 0.00 0.00 0.00 3.07
353 354 5.573219 TCCTTCATCTCATCACCAAAATGT 58.427 37.500 0.00 0.00 0.00 2.71
355 356 4.707030 TCATCTCATCACCAAAATGTGC 57.293 40.909 0.00 0.00 36.17 4.57
367 368 2.128771 AAATGTGCGCTACCATTCCT 57.871 45.000 9.73 0.00 0.00 3.36
379 380 0.916358 CCATTCCTCCACACCCCTCT 60.916 60.000 0.00 0.00 0.00 3.69
381 382 1.566298 ATTCCTCCACACCCCTCTGC 61.566 60.000 0.00 0.00 0.00 4.26
418 419 2.026449 CCCAAGGAGCTTCTTCACTGAT 60.026 50.000 3.55 0.00 0.00 2.90
430 431 4.186926 TCTTCACTGATGAGCACATAAGC 58.813 43.478 8.32 0.00 38.27 3.09
436 437 0.107508 ATGAGCACATAAGCGGCACT 60.108 50.000 1.45 0.00 40.15 4.40
448 449 1.300233 CGGCACTATCTTCTCCGGC 60.300 63.158 0.00 0.00 36.73 6.13
450 451 1.403687 GGCACTATCTTCTCCGGCCT 61.404 60.000 0.00 0.00 37.00 5.19
464 465 4.947147 GCCTGCGGTGGTCCAACA 62.947 66.667 7.90 0.00 0.00 3.33
476 477 2.711009 TGGTCCAACAGAGACAATCCTT 59.289 45.455 0.00 0.00 35.89 3.36
477 478 3.244561 TGGTCCAACAGAGACAATCCTTC 60.245 47.826 0.00 0.00 35.89 3.46
492 493 5.104569 ACAATCCTTCTTCCTCATCTTCTCC 60.105 44.000 0.00 0.00 0.00 3.71
497 498 5.396213 CCTTCTTCCTCATCTTCTCCGAAAT 60.396 44.000 0.00 0.00 0.00 2.17
502 503 5.348986 TCCTCATCTTCTCCGAAATTAACG 58.651 41.667 0.00 0.00 0.00 3.18
505 506 3.322211 TCTTCTCCGAAATTAACGCCA 57.678 42.857 0.00 0.00 0.00 5.69
508 509 2.768698 TCTCCGAAATTAACGCCACAA 58.231 42.857 0.00 0.00 0.00 3.33
509 510 2.481185 TCTCCGAAATTAACGCCACAAC 59.519 45.455 0.00 0.00 0.00 3.32
510 511 2.482721 CTCCGAAATTAACGCCACAACT 59.517 45.455 0.00 0.00 0.00 3.16
517 518 0.601576 TAACGCCACAACTGCATCGT 60.602 50.000 0.00 0.00 0.00 3.73
518 519 1.444119 AACGCCACAACTGCATCGTT 61.444 50.000 0.00 0.00 35.66 3.85
531 532 3.457484 TCGTTTGCCGACCCACTA 58.543 55.556 0.00 0.00 41.60 2.74
534 535 2.357760 TTTGCCGACCCACTACGC 60.358 61.111 0.00 0.00 0.00 4.42
540 541 2.632544 CGACCCACTACGCTCCACA 61.633 63.158 0.00 0.00 0.00 4.17
541 542 1.080025 GACCCACTACGCTCCACAC 60.080 63.158 0.00 0.00 0.00 3.82
543 544 2.579657 CCCACTACGCTCCACACCA 61.580 63.158 0.00 0.00 0.00 4.17
544 545 1.596934 CCACTACGCTCCACACCAT 59.403 57.895 0.00 0.00 0.00 3.55
546 547 1.078709 CACTACGCTCCACACCATTG 58.921 55.000 0.00 0.00 0.00 2.82
547 548 0.036388 ACTACGCTCCACACCATTGG 60.036 55.000 0.00 0.00 38.10 3.16
548 549 0.249120 CTACGCTCCACACCATTGGA 59.751 55.000 10.37 0.00 43.83 3.53
549 550 0.908910 TACGCTCCACACCATTGGAT 59.091 50.000 10.37 0.00 44.97 3.41
550 551 0.392998 ACGCTCCACACCATTGGATC 60.393 55.000 10.37 0.00 44.97 3.36
551 552 1.097547 CGCTCCACACCATTGGATCC 61.098 60.000 10.37 4.20 44.97 3.36
552 553 0.034186 GCTCCACACCATTGGATCCA 60.034 55.000 11.44 11.44 44.97 3.41
553 554 1.755179 CTCCACACCATTGGATCCAC 58.245 55.000 15.91 0.00 44.97 4.02
554 555 0.331278 TCCACACCATTGGATCCACC 59.669 55.000 15.91 0.00 41.00 4.61
555 556 0.684153 CCACACCATTGGATCCACCC 60.684 60.000 15.91 0.00 39.24 4.61
556 557 1.031571 CACACCATTGGATCCACCCG 61.032 60.000 15.91 6.77 38.00 5.28
557 558 1.302949 CACCATTGGATCCACCCGT 59.697 57.895 15.91 7.47 38.00 5.28
558 559 1.031571 CACCATTGGATCCACCCGTG 61.032 60.000 15.91 15.98 38.00 4.94
559 560 1.302949 CCATTGGATCCACCCGTGT 59.697 57.895 15.91 0.00 38.00 4.49
560 561 0.748005 CCATTGGATCCACCCGTGTC 60.748 60.000 15.91 0.00 38.00 3.67
561 562 1.089481 CATTGGATCCACCCGTGTCG 61.089 60.000 15.91 0.00 38.00 4.35
562 563 2.869503 ATTGGATCCACCCGTGTCGC 62.870 60.000 15.91 0.00 38.00 5.19
563 564 3.771160 GGATCCACCCGTGTCGCT 61.771 66.667 6.95 0.00 0.00 4.93
564 565 2.509336 GATCCACCCGTGTCGCTG 60.509 66.667 0.00 0.00 0.00 5.18
565 566 4.760047 ATCCACCCGTGTCGCTGC 62.760 66.667 0.00 0.00 0.00 5.25
599 813 4.154347 CTGTCCCTGAGCTCCCGC 62.154 72.222 12.15 0.00 0.00 6.13
614 828 4.379243 CGCTGCCGTCCCTGAGTT 62.379 66.667 0.00 0.00 0.00 3.01
615 829 2.435059 GCTGCCGTCCCTGAGTTC 60.435 66.667 0.00 0.00 0.00 3.01
616 830 2.266055 CTGCCGTCCCTGAGTTCC 59.734 66.667 0.00 0.00 0.00 3.62
617 831 2.525629 TGCCGTCCCTGAGTTCCA 60.526 61.111 0.00 0.00 0.00 3.53
618 832 2.266055 GCCGTCCCTGAGTTCCAG 59.734 66.667 0.00 0.00 42.55 3.86
619 833 2.584391 GCCGTCCCTGAGTTCCAGT 61.584 63.158 0.00 0.00 41.33 4.00
620 834 1.592223 CCGTCCCTGAGTTCCAGTC 59.408 63.158 0.00 0.00 41.33 3.51
629 843 3.112709 GTTCCAGTCGCAGTCGGC 61.113 66.667 0.00 0.00 41.36 5.54
645 859 3.490890 GCTTCCGCCATCAGTGTC 58.509 61.111 0.00 0.00 0.00 3.67
654 868 0.179073 CCATCAGTGTCGATGTCCCC 60.179 60.000 0.00 0.00 41.06 4.81
656 870 2.298158 ATCAGTGTCGATGTCCCCGC 62.298 60.000 0.00 0.00 0.00 6.13
672 886 3.902086 GCCGAGCTCCTCCGTACC 61.902 72.222 8.47 0.00 0.00 3.34
687 901 1.750018 TACCGTCGGATTCGCCTCA 60.750 57.895 20.51 0.00 36.13 3.86
700 914 2.266055 CCTCACGACTTCCCTGCC 59.734 66.667 0.00 0.00 0.00 4.85
704 918 2.030562 ACGACTTCCCTGCCGTTG 59.969 61.111 0.00 0.00 30.41 4.10
706 920 2.747686 GACTTCCCTGCCGTTGGA 59.252 61.111 0.00 0.00 0.00 3.53
708 922 0.744771 GACTTCCCTGCCGTTGGATC 60.745 60.000 0.00 0.00 0.00 3.36
742 956 6.553100 TCATGTGGTTCTCAAATTTTAGGGTT 59.447 34.615 0.00 0.00 0.00 4.11
795 1009 3.297134 ACACATTTTCTGTCCACACCT 57.703 42.857 0.00 0.00 35.29 4.00
804 1018 2.775384 TCTGTCCACACCTAAAACCAGT 59.225 45.455 0.00 0.00 0.00 4.00
805 1019 3.139077 CTGTCCACACCTAAAACCAGTC 58.861 50.000 0.00 0.00 0.00 3.51
808 1022 4.409574 TGTCCACACCTAAAACCAGTCTTA 59.590 41.667 0.00 0.00 0.00 2.10
809 1023 4.995487 GTCCACACCTAAAACCAGTCTTAG 59.005 45.833 0.00 0.00 0.00 2.18
810 1024 4.041198 TCCACACCTAAAACCAGTCTTAGG 59.959 45.833 8.14 8.14 46.57 2.69
811 1025 4.324267 CACACCTAAAACCAGTCTTAGGG 58.676 47.826 13.23 6.06 45.79 3.53
812 1026 3.978672 ACACCTAAAACCAGTCTTAGGGT 59.021 43.478 13.23 6.56 45.79 4.34
813 1027 5.012354 CACACCTAAAACCAGTCTTAGGGTA 59.988 44.000 13.23 0.00 45.79 3.69
814 1028 5.789054 ACACCTAAAACCAGTCTTAGGGTAT 59.211 40.000 13.23 0.00 45.79 2.73
815 1029 6.070366 ACACCTAAAACCAGTCTTAGGGTATC 60.070 42.308 13.23 0.00 45.79 2.24
816 1030 6.027482 ACCTAAAACCAGTCTTAGGGTATCA 58.973 40.000 13.23 0.00 45.79 2.15
838 1064 7.531857 TCACAAATTATAGGGCTGTTTGAAA 57.468 32.000 0.00 0.00 34.71 2.69
839 1065 7.957002 TCACAAATTATAGGGCTGTTTGAAAA 58.043 30.769 0.00 0.00 34.71 2.29
869 1095 3.441500 AGGAAAAGTTCAGGGGCTAAG 57.558 47.619 0.00 0.00 0.00 2.18
904 1148 6.544564 TCTCGAGAAACAAACATTTTTACCCT 59.455 34.615 14.01 0.00 0.00 4.34
962 1217 2.029288 CACAGCACACTACGCCCAG 61.029 63.158 0.00 0.00 0.00 4.45
1386 1658 2.360852 GACGTCGACCTCCTCCCA 60.361 66.667 10.58 0.00 0.00 4.37
1396 1668 1.079256 CTCCTCCCAGACACCTCCA 59.921 63.158 0.00 0.00 0.00 3.86
2051 2328 7.147976 GTGCCTCATATTTCCATTAATTGGTC 58.852 38.462 0.00 0.00 46.52 4.02
2055 2339 8.703743 CCTCATATTTCCATTAATTGGTCCAAA 58.296 33.333 8.75 0.00 46.52 3.28
2291 2601 0.773014 CATATCATGGTGAGGCCCCA 59.227 55.000 0.00 0.00 36.04 4.96
2323 2633 1.242076 GGCATACATCTGCACCATCC 58.758 55.000 0.00 0.00 44.12 3.51
2334 2663 1.226686 GCACCATCCTGCTAGCATCG 61.227 60.000 19.72 11.71 34.06 3.84
2390 2729 7.095313 ACTGCATATGCTCTTCTTTATCGAATG 60.095 37.037 27.13 0.89 42.66 2.67
2391 2730 6.930722 TGCATATGCTCTTCTTTATCGAATGA 59.069 34.615 27.13 0.00 42.66 2.57
2392 2731 7.442062 TGCATATGCTCTTCTTTATCGAATGAA 59.558 33.333 27.13 0.00 42.66 2.57
2393 2732 8.449397 GCATATGCTCTTCTTTATCGAATGAAT 58.551 33.333 20.64 0.00 38.21 2.57
2474 2823 3.006967 AGTCCGGTACCATAGAATGCATC 59.993 47.826 13.54 0.00 0.00 3.91
2480 2829 1.768275 ACCATAGAATGCATCCGGTCA 59.232 47.619 0.00 0.00 0.00 4.02
2603 2952 0.617935 TTCTGTTGCCCGATGATCCA 59.382 50.000 0.00 0.00 0.00 3.41
2625 2974 2.292569 ACGGATCGTATGTATCGCAAGT 59.707 45.455 0.00 0.00 38.73 3.16
2684 3034 1.599518 CGTACTGTGGGCAAGCCAA 60.600 57.895 13.87 0.00 37.98 4.52
2727 3077 2.158559 GGAGCATCGAGAGAGCATCTA 58.841 52.381 0.00 0.00 41.58 1.98
2774 3124 3.331150 CAACTACTGTCGCATTGGGTTA 58.669 45.455 0.24 0.00 0.00 2.85
2775 3125 3.906720 ACTACTGTCGCATTGGGTTAT 57.093 42.857 0.24 0.00 0.00 1.89
2777 3127 5.546621 ACTACTGTCGCATTGGGTTATAT 57.453 39.130 0.24 0.00 0.00 0.86
2778 3128 5.539048 ACTACTGTCGCATTGGGTTATATC 58.461 41.667 0.24 0.00 0.00 1.63
2779 3129 4.415881 ACTGTCGCATTGGGTTATATCA 57.584 40.909 0.24 0.00 0.00 2.15
2783 3134 3.498397 GTCGCATTGGGTTATATCACCTG 59.502 47.826 6.05 0.00 36.97 4.00
2863 3214 0.840617 TGTGCACCAAGGGTAGACAA 59.159 50.000 15.69 0.00 32.11 3.18
2935 3313 3.000322 CGTGTTTAGCCTGATTAGCTTCG 60.000 47.826 0.00 0.00 41.83 3.79
3004 3382 5.278907 CCATTCTGTTGCAACCATTGTTCTA 60.279 40.000 26.14 3.75 30.42 2.10
3178 3556 4.110036 TGTCTGTTATGACATCACCTCG 57.890 45.455 0.00 0.00 41.43 4.63
3182 3560 2.167693 TGTTATGACATCACCTCGTCCC 59.832 50.000 0.00 0.00 0.00 4.46
3188 3566 0.031314 CATCACCTCGTCCCTGATCG 59.969 60.000 0.00 0.00 0.00 3.69
3230 3639 8.200024 TGTTTTTCTTTTTATCATGGGGATGA 57.800 30.769 0.00 0.00 36.72 2.92
3232 3641 7.789202 TTTTCTTTTTATCATGGGGATGACA 57.211 32.000 0.00 0.00 36.72 3.58
3233 3642 7.976414 TTTCTTTTTATCATGGGGATGACAT 57.024 32.000 0.00 0.00 36.72 3.06
3234 3643 7.976414 TTCTTTTTATCATGGGGATGACATT 57.024 32.000 0.00 0.00 36.72 2.71
3237 3646 4.458256 TTATCATGGGGATGACATTGCT 57.542 40.909 0.00 0.00 36.72 3.91
3248 3657 5.769484 GATGACATTGCTTCATCCTTGAT 57.231 39.130 6.14 0.00 42.45 2.57
3249 3658 5.759963 GATGACATTGCTTCATCCTTGATC 58.240 41.667 6.14 0.00 42.45 2.92
3250 3659 4.591929 TGACATTGCTTCATCCTTGATCA 58.408 39.130 0.00 0.00 0.00 2.92
3251 3660 4.638865 TGACATTGCTTCATCCTTGATCAG 59.361 41.667 0.00 0.00 0.00 2.90
3267 3676 6.203145 CCTTGATCAGATTTCAGCTCATGTAG 59.797 42.308 0.00 0.00 0.00 2.74
3304 4081 7.573710 TGAATTACAAAGCCCTCATACAGTAT 58.426 34.615 0.00 0.00 0.00 2.12
3340 4117 9.027129 CAATTGCATAATTGGACACATCTAAAG 57.973 33.333 3.57 0.00 45.99 1.85
3342 4119 6.422333 TGCATAATTGGACACATCTAAAGGA 58.578 36.000 0.00 0.00 0.00 3.36
3376 4153 6.132658 AGATCTACTAAGAACCTGATGAGCA 58.867 40.000 0.00 0.00 34.73 4.26
3473 4250 0.681175 AAATTGTTGAGGGTGGCTGC 59.319 50.000 0.00 0.00 0.00 5.25
3498 4340 0.391661 CCCAGTGAGGAATGTGACCG 60.392 60.000 0.00 0.00 41.22 4.79
3506 4348 0.035820 GGAATGTGACCGGCCTGTTA 60.036 55.000 0.00 0.00 0.00 2.41
3581 4423 1.555533 GAGGTAGAGGGGAAAGGTGTG 59.444 57.143 0.00 0.00 0.00 3.82
3583 4425 0.035343 GTAGAGGGGAAAGGTGTGGC 60.035 60.000 0.00 0.00 0.00 5.01
3585 4427 1.303643 GAGGGGAAAGGTGTGGCTG 60.304 63.158 0.00 0.00 0.00 4.85
3586 4428 2.991540 GGGGAAAGGTGTGGCTGC 60.992 66.667 0.00 0.00 0.00 5.25
3587 4429 2.203480 GGGAAAGGTGTGGCTGCA 60.203 61.111 0.50 0.00 0.00 4.41
3609 4462 1.694696 CCTACACCCCTTATCTCAGCC 59.305 57.143 0.00 0.00 0.00 4.85
3669 4522 7.369551 TCTAGACCTAGTTTCTTTGGTTTCA 57.630 36.000 4.20 0.00 34.84 2.69
3686 4539 5.476254 TGGTTTCATTCATGCTGATACACAA 59.524 36.000 15.28 0.71 0.00 3.33
3733 4586 8.270030 AGTGATGAGGAGAAATGAATAATCACA 58.730 33.333 12.81 0.00 42.30 3.58
3737 4590 9.863650 ATGAGGAGAAATGAATAATCACAAGAT 57.136 29.630 0.00 0.00 38.69 2.40
3824 4683 9.995003 AAAAAGACTACATAATCAAAATGGCAA 57.005 25.926 0.00 0.00 0.00 4.52
3864 4723 9.377312 CCAAACAAAAAGAGGAATCTGTTAAAA 57.623 29.630 0.00 0.00 0.00 1.52
3893 4752 7.946207 TGGAAGTGAAGTGCAATAATTTGTTA 58.054 30.769 0.00 0.00 35.17 2.41
3895 4754 8.863049 GGAAGTGAAGTGCAATAATTTGTTATG 58.137 33.333 0.00 0.00 35.17 1.90
3896 4755 9.410556 GAAGTGAAGTGCAATAATTTGTTATGT 57.589 29.630 0.00 0.00 35.17 2.29
3900 4759 8.518702 TGAAGTGCAATAATTTGTTATGTAGCA 58.481 29.630 0.00 0.00 35.17 3.49
3901 4760 8.915871 AAGTGCAATAATTTGTTATGTAGCAG 57.084 30.769 0.00 0.00 35.17 4.24
3903 4762 8.739039 AGTGCAATAATTTGTTATGTAGCAGAA 58.261 29.630 0.00 0.00 35.17 3.02
3905 4764 8.739039 TGCAATAATTTGTTATGTAGCAGAAGT 58.261 29.630 0.00 0.00 35.17 3.01
3906 4765 9.573133 GCAATAATTTGTTATGTAGCAGAAGTT 57.427 29.630 0.00 0.00 35.17 2.66
3910 4769 7.986085 ATTTGTTATGTAGCAGAAGTTCAGT 57.014 32.000 5.50 0.00 0.00 3.41
3912 4771 7.421530 TTGTTATGTAGCAGAAGTTCAGTTC 57.578 36.000 5.50 0.00 0.00 3.01
3913 4772 6.521162 TGTTATGTAGCAGAAGTTCAGTTCA 58.479 36.000 5.50 0.00 0.00 3.18
3914 4773 6.989759 TGTTATGTAGCAGAAGTTCAGTTCAA 59.010 34.615 5.50 0.00 0.00 2.69
3915 4774 7.497579 TGTTATGTAGCAGAAGTTCAGTTCAAA 59.502 33.333 5.50 0.00 0.00 2.69
3916 4775 6.942532 ATGTAGCAGAAGTTCAGTTCAAAA 57.057 33.333 5.50 0.00 0.00 2.44
3917 4776 6.363577 TGTAGCAGAAGTTCAGTTCAAAAG 57.636 37.500 5.50 0.00 0.00 2.27
3918 4777 6.112734 TGTAGCAGAAGTTCAGTTCAAAAGA 58.887 36.000 5.50 0.00 0.00 2.52
3920 4779 6.705863 AGCAGAAGTTCAGTTCAAAAGAAT 57.294 33.333 5.50 0.00 0.00 2.40
3921 4780 6.733145 AGCAGAAGTTCAGTTCAAAAGAATC 58.267 36.000 5.50 0.00 0.00 2.52
3922 4781 5.917447 GCAGAAGTTCAGTTCAAAAGAATCC 59.083 40.000 5.50 0.00 0.00 3.01
3925 4784 3.253432 AGTTCAGTTCAAAAGAATCCCGC 59.747 43.478 0.00 0.00 0.00 6.13
3926 4785 2.857483 TCAGTTCAAAAGAATCCCGCA 58.143 42.857 0.00 0.00 0.00 5.69
3928 4787 3.253188 TCAGTTCAAAAGAATCCCGCAAG 59.747 43.478 0.00 0.00 0.00 4.01
3929 4788 3.004734 CAGTTCAAAAGAATCCCGCAAGT 59.995 43.478 0.00 0.00 0.00 3.16
3930 4789 3.004734 AGTTCAAAAGAATCCCGCAAGTG 59.995 43.478 0.00 0.00 0.00 3.16
3931 4790 2.582052 TCAAAAGAATCCCGCAAGTGT 58.418 42.857 0.00 0.00 0.00 3.55
3932 4791 2.955660 TCAAAAGAATCCCGCAAGTGTT 59.044 40.909 0.00 0.00 0.00 3.32
3933 4792 3.383185 TCAAAAGAATCCCGCAAGTGTTT 59.617 39.130 0.00 0.00 0.00 2.83
3934 4793 4.580995 TCAAAAGAATCCCGCAAGTGTTTA 59.419 37.500 0.00 0.00 0.00 2.01
3935 4794 5.067936 TCAAAAGAATCCCGCAAGTGTTTAA 59.932 36.000 0.00 0.00 0.00 1.52
3937 4796 5.523438 AAGAATCCCGCAAGTGTTTAAAA 57.477 34.783 0.00 0.00 0.00 1.52
3938 4797 5.722021 AGAATCCCGCAAGTGTTTAAAAT 57.278 34.783 0.00 0.00 0.00 1.82
3939 4798 6.096673 AGAATCCCGCAAGTGTTTAAAATT 57.903 33.333 0.00 0.00 0.00 1.82
3941 4800 7.662897 AGAATCCCGCAAGTGTTTAAAATTAA 58.337 30.769 0.00 0.00 0.00 1.40
3943 4802 6.636562 TCCCGCAAGTGTTTAAAATTAAGA 57.363 33.333 0.00 0.00 0.00 2.10
3944 4803 7.040473 TCCCGCAAGTGTTTAAAATTAAGAA 57.960 32.000 0.00 0.00 0.00 2.52
3945 4804 7.662897 TCCCGCAAGTGTTTAAAATTAAGAAT 58.337 30.769 0.00 0.00 0.00 2.40
3946 4805 7.596995 TCCCGCAAGTGTTTAAAATTAAGAATG 59.403 33.333 0.00 0.00 0.00 2.67
3948 4807 8.760569 CCGCAAGTGTTTAAAATTAAGAATGTT 58.239 29.630 0.00 0.00 0.00 2.71
3949 4808 9.777843 CGCAAGTGTTTAAAATTAAGAATGTTC 57.222 29.630 0.00 0.00 0.00 3.18
3960 4819 7.750229 AATTAAGAATGTTCAGAACAGAGCA 57.250 32.000 20.55 4.06 45.95 4.26
3961 4820 7.750229 ATTAAGAATGTTCAGAACAGAGCAA 57.250 32.000 20.55 11.11 45.95 3.91
3962 4821 7.566760 TTAAGAATGTTCAGAACAGAGCAAA 57.433 32.000 20.55 9.82 45.95 3.68
3963 4822 6.455360 AAGAATGTTCAGAACAGAGCAAAA 57.545 33.333 20.55 0.00 45.95 2.44
3966 4825 5.779529 ATGTTCAGAACAGAGCAAAACAT 57.220 34.783 20.55 0.00 45.95 2.71
3967 4826 6.882610 ATGTTCAGAACAGAGCAAAACATA 57.117 33.333 20.55 0.00 45.95 2.29
3968 4827 6.304356 TGTTCAGAACAGAGCAAAACATAG 57.696 37.500 12.24 0.00 36.25 2.23
3969 4828 6.054941 TGTTCAGAACAGAGCAAAACATAGA 58.945 36.000 12.24 0.00 36.25 1.98
3970 4829 6.542005 TGTTCAGAACAGAGCAAAACATAGAA 59.458 34.615 12.24 0.00 36.25 2.10
3971 4830 6.791887 TCAGAACAGAGCAAAACATAGAAG 57.208 37.500 0.00 0.00 0.00 2.85
3973 4832 5.006386 AGAACAGAGCAAAACATAGAAGGG 58.994 41.667 0.00 0.00 0.00 3.95
3974 4833 3.690460 ACAGAGCAAAACATAGAAGGGG 58.310 45.455 0.00 0.00 0.00 4.79
3975 4834 3.019564 CAGAGCAAAACATAGAAGGGGG 58.980 50.000 0.00 0.00 0.00 5.40
3977 4836 3.054065 AGAGCAAAACATAGAAGGGGGAG 60.054 47.826 0.00 0.00 0.00 4.30
3978 4837 2.919602 AGCAAAACATAGAAGGGGGAGA 59.080 45.455 0.00 0.00 0.00 3.71
3980 4839 3.696548 GCAAAACATAGAAGGGGGAGAAG 59.303 47.826 0.00 0.00 0.00 2.85
3981 4840 4.273318 CAAAACATAGAAGGGGGAGAAGG 58.727 47.826 0.00 0.00 0.00 3.46
3982 4841 3.508952 AACATAGAAGGGGGAGAAGGA 57.491 47.619 0.00 0.00 0.00 3.36
3983 4842 3.508952 ACATAGAAGGGGGAGAAGGAA 57.491 47.619 0.00 0.00 0.00 3.36
3984 4843 3.116174 ACATAGAAGGGGGAGAAGGAAC 58.884 50.000 0.00 0.00 0.00 3.62
3985 4844 1.861982 TAGAAGGGGGAGAAGGAACG 58.138 55.000 0.00 0.00 0.00 3.95
3987 4846 0.249676 GAAGGGGGAGAAGGAACGAC 59.750 60.000 0.00 0.00 0.00 4.34
3988 4847 1.199425 AAGGGGGAGAAGGAACGACC 61.199 60.000 0.00 0.00 39.35 4.79
3989 4848 1.916777 GGGGGAGAAGGAACGACCA 60.917 63.158 0.00 0.00 42.04 4.02
3990 4849 1.272554 GGGGGAGAAGGAACGACCAT 61.273 60.000 0.00 0.00 42.04 3.55
3991 4850 0.107654 GGGGAGAAGGAACGACCATG 60.108 60.000 0.00 0.00 42.04 3.66
3992 4851 0.902531 GGGAGAAGGAACGACCATGA 59.097 55.000 0.00 0.00 42.04 3.07
3995 4854 1.936547 GAGAAGGAACGACCATGATGC 59.063 52.381 0.00 0.00 42.04 3.91
3996 4855 1.278985 AGAAGGAACGACCATGATGCA 59.721 47.619 0.00 0.00 42.04 3.96
3997 4856 2.083774 GAAGGAACGACCATGATGCAA 58.916 47.619 0.00 0.00 42.04 4.08
3998 4857 1.742761 AGGAACGACCATGATGCAAG 58.257 50.000 0.00 0.00 42.04 4.01
3999 4858 1.278985 AGGAACGACCATGATGCAAGA 59.721 47.619 0.00 0.00 42.04 3.02
4001 4860 2.684881 GGAACGACCATGATGCAAGATT 59.315 45.455 0.00 0.00 38.79 2.40
4003 4862 3.770263 ACGACCATGATGCAAGATTTG 57.230 42.857 0.00 0.00 0.00 2.32
4005 4864 3.119743 ACGACCATGATGCAAGATTTGTG 60.120 43.478 0.00 0.00 0.00 3.33
4008 4867 4.018490 ACCATGATGCAAGATTTGTGCTA 58.982 39.130 0.00 0.00 42.69 3.49
4009 4868 4.142315 ACCATGATGCAAGATTTGTGCTAC 60.142 41.667 0.00 0.00 42.69 3.58
4010 4869 4.357142 CATGATGCAAGATTTGTGCTACC 58.643 43.478 0.00 0.00 42.69 3.18
4011 4870 3.419943 TGATGCAAGATTTGTGCTACCA 58.580 40.909 0.00 0.00 42.69 3.25
4012 4871 3.191162 TGATGCAAGATTTGTGCTACCAC 59.809 43.478 0.00 0.00 42.69 4.16
4013 4872 2.862541 TGCAAGATTTGTGCTACCACT 58.137 42.857 0.00 0.00 42.69 4.00
4014 4873 2.813754 TGCAAGATTTGTGCTACCACTC 59.186 45.455 0.00 0.00 42.69 3.51
4015 4874 2.813754 GCAAGATTTGTGCTACCACTCA 59.186 45.455 0.00 0.00 42.54 3.41
4016 4875 3.253188 GCAAGATTTGTGCTACCACTCAA 59.747 43.478 0.00 0.00 42.54 3.02
4017 4876 4.082571 GCAAGATTTGTGCTACCACTCAAT 60.083 41.667 0.00 0.00 42.54 2.57
4018 4877 5.565439 GCAAGATTTGTGCTACCACTCAATT 60.565 40.000 0.00 0.00 42.54 2.32
4019 4878 6.449698 CAAGATTTGTGCTACCACTCAATTT 58.550 36.000 0.00 0.00 42.54 1.82
4020 4879 6.017400 AGATTTGTGCTACCACTCAATTTG 57.983 37.500 0.00 0.00 42.54 2.32
4021 4880 5.769662 AGATTTGTGCTACCACTCAATTTGA 59.230 36.000 0.00 0.00 42.54 2.69
4022 4881 5.843673 TTTGTGCTACCACTCAATTTGAA 57.156 34.783 0.01 0.00 42.54 2.69
4023 4882 5.437289 TTGTGCTACCACTCAATTTGAAG 57.563 39.130 0.01 0.00 42.54 3.02
4025 4884 3.821033 GTGCTACCACTCAATTTGAAGGT 59.179 43.478 20.56 20.56 38.13 3.50
4026 4885 4.072131 TGCTACCACTCAATTTGAAGGTC 58.928 43.478 20.42 11.78 36.58 3.85
4028 4887 5.012664 TGCTACCACTCAATTTGAAGGTCTA 59.987 40.000 20.42 8.75 36.58 2.59
4030 4889 7.093068 TGCTACCACTCAATTTGAAGGTCTATA 60.093 37.037 20.42 7.96 36.58 1.31
4031 4890 7.439655 GCTACCACTCAATTTGAAGGTCTATAG 59.560 40.741 20.42 15.15 36.58 1.31
4032 4891 7.259088 ACCACTCAATTTGAAGGTCTATAGT 57.741 36.000 14.33 0.00 31.64 2.12
4033 4892 7.331791 ACCACTCAATTTGAAGGTCTATAGTC 58.668 38.462 14.33 0.00 31.64 2.59
4036 4895 9.442047 CACTCAATTTGAAGGTCTATAGTCTTT 57.558 33.333 0.01 0.00 0.00 2.52
4037 4896 9.660180 ACTCAATTTGAAGGTCTATAGTCTTTC 57.340 33.333 12.73 12.73 0.00 2.62
4044 4903 9.529823 TTGAAGGTCTATAGTCTTTCTTACTCA 57.470 33.333 17.94 6.69 0.00 3.41
4045 4904 9.529823 TGAAGGTCTATAGTCTTTCTTACTCAA 57.470 33.333 17.94 0.00 0.00 3.02
4048 4907 9.482175 AGGTCTATAGTCTTTCTTACTCAATGT 57.518 33.333 0.00 0.00 0.00 2.71
4099 4958 7.463544 TGTTCAGATTATTGTAATTGTCAGCG 58.536 34.615 0.00 0.00 0.00 5.18
4100 4959 7.119116 TGTTCAGATTATTGTAATTGTCAGCGT 59.881 33.333 0.00 0.00 0.00 5.07
4101 4960 7.234187 TCAGATTATTGTAATTGTCAGCGTC 57.766 36.000 0.00 0.00 0.00 5.19
4102 4961 7.041721 TCAGATTATTGTAATTGTCAGCGTCT 58.958 34.615 0.00 0.00 0.00 4.18
4104 4963 7.637519 CAGATTATTGTAATTGTCAGCGTCTTG 59.362 37.037 0.00 0.00 0.00 3.02
4105 4964 7.549134 AGATTATTGTAATTGTCAGCGTCTTGA 59.451 33.333 0.00 0.00 0.00 3.02
4106 4965 7.609760 TTATTGTAATTGTCAGCGTCTTGAT 57.390 32.000 0.00 0.00 0.00 2.57
4108 4967 6.647212 TTGTAATTGTCAGCGTCTTGATAG 57.353 37.500 0.00 0.00 0.00 2.08
4110 4969 2.010145 TTGTCAGCGTCTTGATAGGC 57.990 50.000 0.00 0.00 0.00 3.93
4111 4970 0.175760 TGTCAGCGTCTTGATAGGCC 59.824 55.000 0.00 0.00 0.00 5.19
4112 4971 0.461961 GTCAGCGTCTTGATAGGCCT 59.538 55.000 11.78 11.78 0.00 5.19
4113 4972 1.134670 GTCAGCGTCTTGATAGGCCTT 60.135 52.381 12.58 0.00 0.00 4.35
4114 4973 1.137086 TCAGCGTCTTGATAGGCCTTC 59.863 52.381 12.58 9.40 0.00 3.46
4115 4974 0.466124 AGCGTCTTGATAGGCCTTCC 59.534 55.000 12.58 3.40 0.00 3.46
4117 4976 1.808133 GCGTCTTGATAGGCCTTCCTG 60.808 57.143 12.58 4.48 44.08 3.86
4118 4977 1.757118 CGTCTTGATAGGCCTTCCTGA 59.243 52.381 12.58 6.71 44.08 3.86
4119 4978 2.366916 CGTCTTGATAGGCCTTCCTGAT 59.633 50.000 12.58 0.00 44.08 2.90
4120 4979 3.737850 GTCTTGATAGGCCTTCCTGATG 58.262 50.000 12.58 0.00 44.08 3.07
4122 4981 4.041444 GTCTTGATAGGCCTTCCTGATGAT 59.959 45.833 12.58 0.00 44.08 2.45
4123 4982 4.041321 TCTTGATAGGCCTTCCTGATGATG 59.959 45.833 12.58 0.00 44.08 3.07
4125 5277 2.494888 TAGGCCTTCCTGATGATGGA 57.505 50.000 12.58 0.00 44.08 3.41
4130 5282 2.621998 GCCTTCCTGATGATGGATGTTG 59.378 50.000 0.00 0.00 40.03 3.33
4145 5297 3.119352 GGATGTTGTTCCAAGATTGCCTC 60.119 47.826 0.00 0.00 35.72 4.70
4146 5298 3.228188 TGTTGTTCCAAGATTGCCTCT 57.772 42.857 0.00 0.00 34.96 3.69
4147 5299 3.565307 TGTTGTTCCAAGATTGCCTCTT 58.435 40.909 0.00 0.00 45.34 2.85
4153 5305 3.987594 AAGATTGCCTCTTGTCCCC 57.012 52.632 0.00 0.00 42.76 4.81
4156 5308 0.681243 GATTGCCTCTTGTCCCCCAC 60.681 60.000 0.00 0.00 0.00 4.61
4157 5309 1.434513 ATTGCCTCTTGTCCCCCACA 61.435 55.000 0.00 0.00 0.00 4.17
4158 5310 2.034221 GCCTCTTGTCCCCCACAC 59.966 66.667 0.00 0.00 33.41 3.82
4159 5311 2.757077 CCTCTTGTCCCCCACACC 59.243 66.667 0.00 0.00 33.41 4.16
4162 5314 2.172483 CTCTTGTCCCCCACACCGAG 62.172 65.000 0.00 0.00 33.41 4.63
4163 5315 2.122769 TTGTCCCCCACACCGAGA 60.123 61.111 0.00 0.00 33.41 4.04
4164 5316 1.537889 TTGTCCCCCACACCGAGAT 60.538 57.895 0.00 0.00 33.41 2.75
4166 5318 1.987855 GTCCCCCACACCGAGATGA 60.988 63.158 0.00 0.00 0.00 2.92
4170 5322 0.530650 CCCCACACCGAGATGATTCG 60.531 60.000 0.00 0.00 40.18 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.062722 GTCAGAAGAATTGCTAAAAATTGGAGC 59.937 37.037 0.00 0.65 36.72 4.70
1 2 7.543520 GGTCAGAAGAATTGCTAAAAATTGGAG 59.456 37.037 0.00 0.00 29.89 3.86
2 3 7.015098 TGGTCAGAAGAATTGCTAAAAATTGGA 59.985 33.333 0.00 0.00 29.89 3.53
3 4 7.153985 TGGTCAGAAGAATTGCTAAAAATTGG 58.846 34.615 0.00 0.00 29.89 3.16
4 5 8.592105 TTGGTCAGAAGAATTGCTAAAAATTG 57.408 30.769 0.00 0.00 29.89 2.32
5 6 9.045223 GTTTGGTCAGAAGAATTGCTAAAAATT 57.955 29.630 0.00 0.00 32.43 1.82
6 7 8.203485 TGTTTGGTCAGAAGAATTGCTAAAAAT 58.797 29.630 0.00 0.00 0.00 1.82
7 8 7.491048 GTGTTTGGTCAGAAGAATTGCTAAAAA 59.509 33.333 0.00 0.00 0.00 1.94
8 9 6.978080 GTGTTTGGTCAGAAGAATTGCTAAAA 59.022 34.615 0.00 0.00 0.00 1.52
9 10 6.321181 AGTGTTTGGTCAGAAGAATTGCTAAA 59.679 34.615 0.00 0.00 0.00 1.85
10 11 5.827797 AGTGTTTGGTCAGAAGAATTGCTAA 59.172 36.000 0.00 0.00 0.00 3.09
11 12 5.376625 AGTGTTTGGTCAGAAGAATTGCTA 58.623 37.500 0.00 0.00 0.00 3.49
12 13 4.210331 AGTGTTTGGTCAGAAGAATTGCT 58.790 39.130 0.00 0.00 0.00 3.91
13 14 4.574599 AGTGTTTGGTCAGAAGAATTGC 57.425 40.909 0.00 0.00 0.00 3.56
14 15 5.335191 GGCTAGTGTTTGGTCAGAAGAATTG 60.335 44.000 0.00 0.00 0.00 2.32
15 16 4.762251 GGCTAGTGTTTGGTCAGAAGAATT 59.238 41.667 0.00 0.00 0.00 2.17
16 17 4.202461 TGGCTAGTGTTTGGTCAGAAGAAT 60.202 41.667 0.00 0.00 0.00 2.40
17 18 3.135712 TGGCTAGTGTTTGGTCAGAAGAA 59.864 43.478 0.00 0.00 0.00 2.52
18 19 2.703536 TGGCTAGTGTTTGGTCAGAAGA 59.296 45.455 0.00 0.00 0.00 2.87
19 20 3.126001 TGGCTAGTGTTTGGTCAGAAG 57.874 47.619 0.00 0.00 0.00 2.85
20 21 3.569194 TTGGCTAGTGTTTGGTCAGAA 57.431 42.857 0.00 0.00 0.00 3.02
21 22 3.118038 ACTTTGGCTAGTGTTTGGTCAGA 60.118 43.478 0.00 0.00 0.00 3.27
22 23 3.214328 ACTTTGGCTAGTGTTTGGTCAG 58.786 45.455 0.00 0.00 0.00 3.51
23 24 3.290948 ACTTTGGCTAGTGTTTGGTCA 57.709 42.857 0.00 0.00 0.00 4.02
24 25 4.499188 GGAAACTTTGGCTAGTGTTTGGTC 60.499 45.833 7.11 0.00 33.49 4.02
25 26 3.383505 GGAAACTTTGGCTAGTGTTTGGT 59.616 43.478 7.11 0.00 33.49 3.67
26 27 3.383185 TGGAAACTTTGGCTAGTGTTTGG 59.617 43.478 7.11 0.00 33.49 3.28
27 28 4.647424 TGGAAACTTTGGCTAGTGTTTG 57.353 40.909 7.11 0.00 33.49 2.93
28 29 5.669164 TTTGGAAACTTTGGCTAGTGTTT 57.331 34.783 3.04 3.04 35.64 2.83
29 30 5.128663 ACATTTGGAAACTTTGGCTAGTGTT 59.871 36.000 0.00 0.00 0.00 3.32
30 31 4.649218 ACATTTGGAAACTTTGGCTAGTGT 59.351 37.500 0.00 0.00 0.00 3.55
31 32 5.200368 ACATTTGGAAACTTTGGCTAGTG 57.800 39.130 0.00 0.00 0.00 2.74
32 33 5.600696 CAACATTTGGAAACTTTGGCTAGT 58.399 37.500 0.00 0.00 0.00 2.57
47 48 2.472488 GCTCAAAACTCGCCAACATTTG 59.528 45.455 0.00 0.00 33.43 2.32
48 49 2.362077 AGCTCAAAACTCGCCAACATTT 59.638 40.909 0.00 0.00 0.00 2.32
49 50 1.956477 AGCTCAAAACTCGCCAACATT 59.044 42.857 0.00 0.00 0.00 2.71
50 51 1.609208 AGCTCAAAACTCGCCAACAT 58.391 45.000 0.00 0.00 0.00 2.71
51 52 1.388547 AAGCTCAAAACTCGCCAACA 58.611 45.000 0.00 0.00 0.00 3.33
52 53 2.385315 GAAAGCTCAAAACTCGCCAAC 58.615 47.619 0.00 0.00 0.00 3.77
53 54 1.336755 GGAAAGCTCAAAACTCGCCAA 59.663 47.619 0.00 0.00 0.00 4.52
54 55 0.951558 GGAAAGCTCAAAACTCGCCA 59.048 50.000 0.00 0.00 0.00 5.69
55 56 0.110192 CGGAAAGCTCAAAACTCGCC 60.110 55.000 0.00 0.00 0.00 5.54
56 57 0.865769 TCGGAAAGCTCAAAACTCGC 59.134 50.000 0.00 0.00 0.00 5.03
57 58 3.602390 TTTCGGAAAGCTCAAAACTCG 57.398 42.857 0.00 0.00 0.00 4.18
58 59 6.828502 AAAATTTCGGAAAGCTCAAAACTC 57.171 33.333 9.30 0.00 0.00 3.01
59 60 6.420903 GCTAAAATTTCGGAAAGCTCAAAACT 59.579 34.615 9.30 0.00 0.00 2.66
60 61 6.420903 AGCTAAAATTTCGGAAAGCTCAAAAC 59.579 34.615 9.30 0.00 35.47 2.43
61 62 6.512297 AGCTAAAATTTCGGAAAGCTCAAAA 58.488 32.000 9.30 0.00 35.47 2.44
62 63 6.084326 AGCTAAAATTTCGGAAAGCTCAAA 57.916 33.333 9.30 0.00 35.47 2.69
63 64 5.705609 AGCTAAAATTTCGGAAAGCTCAA 57.294 34.783 9.30 0.00 35.47 3.02
64 65 5.009610 ACAAGCTAAAATTTCGGAAAGCTCA 59.990 36.000 12.76 0.00 39.29 4.26
65 66 5.343325 CACAAGCTAAAATTTCGGAAAGCTC 59.657 40.000 12.76 0.00 39.29 4.09
66 67 5.222631 CACAAGCTAAAATTTCGGAAAGCT 58.777 37.500 9.30 8.49 41.85 3.74
67 68 4.143326 GCACAAGCTAAAATTTCGGAAAGC 60.143 41.667 9.30 6.31 37.91 3.51
68 69 5.500740 GCACAAGCTAAAATTTCGGAAAG 57.499 39.130 9.30 0.00 37.91 2.62
97 98 0.598942 GGTTTCGCATGCCGGTTTTT 60.599 50.000 13.15 0.00 37.59 1.94
98 99 1.006688 GGTTTCGCATGCCGGTTTT 60.007 52.632 13.15 0.00 37.59 2.43
99 100 1.739338 TTGGTTTCGCATGCCGGTTT 61.739 50.000 13.15 0.00 37.59 3.27
100 101 2.141122 CTTGGTTTCGCATGCCGGTT 62.141 55.000 13.15 0.00 37.59 4.44
101 102 2.596046 TTGGTTTCGCATGCCGGT 60.596 55.556 13.15 0.00 37.59 5.28
102 103 2.179018 CTTGGTTTCGCATGCCGG 59.821 61.111 13.15 0.00 37.59 6.13
103 104 2.504681 GCTTGGTTTCGCATGCCG 60.505 61.111 13.15 7.68 38.61 5.69
104 105 1.444895 CTGCTTGGTTTCGCATGCC 60.445 57.895 13.15 0.00 35.32 4.40
105 106 2.090524 GCTGCTTGGTTTCGCATGC 61.091 57.895 7.91 7.91 35.32 4.06
106 107 1.444895 GGCTGCTTGGTTTCGCATG 60.445 57.895 0.00 0.00 35.32 4.06
107 108 1.589716 GAGGCTGCTTGGTTTCGCAT 61.590 55.000 0.00 0.00 35.32 4.73
108 109 2.203337 AGGCTGCTTGGTTTCGCA 60.203 55.556 0.00 0.00 34.54 5.10
109 110 0.673644 TAGAGGCTGCTTGGTTTCGC 60.674 55.000 0.00 0.00 0.00 4.70
110 111 1.808411 TTAGAGGCTGCTTGGTTTCG 58.192 50.000 0.00 0.00 0.00 3.46
111 112 3.129462 GGATTTAGAGGCTGCTTGGTTTC 59.871 47.826 0.00 0.00 0.00 2.78
112 113 3.092301 GGATTTAGAGGCTGCTTGGTTT 58.908 45.455 0.00 0.00 0.00 3.27
113 114 2.621668 GGGATTTAGAGGCTGCTTGGTT 60.622 50.000 0.00 0.00 0.00 3.67
114 115 1.064389 GGGATTTAGAGGCTGCTTGGT 60.064 52.381 0.00 0.00 0.00 3.67
115 116 1.064463 TGGGATTTAGAGGCTGCTTGG 60.064 52.381 0.00 0.00 0.00 3.61
116 117 2.295885 CTGGGATTTAGAGGCTGCTTG 58.704 52.381 0.00 0.00 0.00 4.01
117 118 1.213926 CCTGGGATTTAGAGGCTGCTT 59.786 52.381 0.00 0.00 0.00 3.91
118 119 0.842635 CCTGGGATTTAGAGGCTGCT 59.157 55.000 0.00 0.00 0.00 4.24
119 120 0.839946 TCCTGGGATTTAGAGGCTGC 59.160 55.000 0.00 0.00 0.00 5.25
120 121 2.122768 AGTCCTGGGATTTAGAGGCTG 58.877 52.381 0.00 0.00 0.00 4.85
121 122 2.122768 CAGTCCTGGGATTTAGAGGCT 58.877 52.381 0.00 0.00 0.00 4.58
122 123 2.103941 CTCAGTCCTGGGATTTAGAGGC 59.896 54.545 0.00 0.00 31.13 4.70
123 124 3.647636 TCTCAGTCCTGGGATTTAGAGG 58.352 50.000 0.00 0.00 34.65 3.69
131 132 5.403558 TCTTGTATATCTCAGTCCTGGGA 57.596 43.478 0.00 0.00 45.30 4.37
132 133 5.510520 GCTTCTTGTATATCTCAGTCCTGGG 60.511 48.000 0.00 0.00 0.00 4.45
133 134 5.304101 AGCTTCTTGTATATCTCAGTCCTGG 59.696 44.000 0.00 0.00 0.00 4.45
134 135 6.403866 AGCTTCTTGTATATCTCAGTCCTG 57.596 41.667 0.00 0.00 0.00 3.86
135 136 7.782644 ACTAAGCTTCTTGTATATCTCAGTCCT 59.217 37.037 0.00 0.00 0.00 3.85
136 137 7.947282 ACTAAGCTTCTTGTATATCTCAGTCC 58.053 38.462 0.00 0.00 0.00 3.85
137 138 9.243637 CAACTAAGCTTCTTGTATATCTCAGTC 57.756 37.037 0.00 0.00 0.00 3.51
138 139 8.754080 ACAACTAAGCTTCTTGTATATCTCAGT 58.246 33.333 16.97 2.90 0.00 3.41
139 140 9.243637 GACAACTAAGCTTCTTGTATATCTCAG 57.756 37.037 18.00 3.13 0.00 3.35
140 141 8.972127 AGACAACTAAGCTTCTTGTATATCTCA 58.028 33.333 18.00 0.00 0.00 3.27
141 142 9.243637 CAGACAACTAAGCTTCTTGTATATCTC 57.756 37.037 18.00 8.37 0.00 2.75
142 143 8.200792 CCAGACAACTAAGCTTCTTGTATATCT 58.799 37.037 18.00 10.75 0.00 1.98
143 144 8.198109 TCCAGACAACTAAGCTTCTTGTATATC 58.802 37.037 18.00 9.16 0.00 1.63
144 145 8.079211 TCCAGACAACTAAGCTTCTTGTATAT 57.921 34.615 18.00 8.36 0.00 0.86
156 157 4.074970 ACCAAGCATTCCAGACAACTAAG 58.925 43.478 0.00 0.00 0.00 2.18
163 164 2.350772 CGTTTCACCAAGCATTCCAGAC 60.351 50.000 0.00 0.00 0.00 3.51
164 165 1.879380 CGTTTCACCAAGCATTCCAGA 59.121 47.619 0.00 0.00 0.00 3.86
170 171 2.002586 CGAGATCGTTTCACCAAGCAT 58.997 47.619 0.00 0.00 34.11 3.79
171 172 1.428448 CGAGATCGTTTCACCAAGCA 58.572 50.000 0.00 0.00 34.11 3.91
184 185 2.102252 ACTTCAAGGATCCTGCGAGATC 59.898 50.000 17.02 7.14 41.69 2.75
188 189 0.173481 CGACTTCAAGGATCCTGCGA 59.827 55.000 17.02 12.65 0.00 5.10
190 191 1.363744 CACGACTTCAAGGATCCTGC 58.636 55.000 17.02 0.12 0.00 4.85
205 206 2.666190 GCACCAGCTTGAGCACGA 60.666 61.111 5.70 0.00 45.16 4.35
256 257 0.810031 ATGAGCACGCCCGTATGTTC 60.810 55.000 0.00 0.00 0.00 3.18
266 267 2.796425 CTCACTCGCATGAGCACGC 61.796 63.158 0.00 0.00 46.69 5.34
268 269 0.805322 CTCCTCACTCGCATGAGCAC 60.805 60.000 0.00 0.00 46.69 4.40
274 275 2.636830 CCAATTTCTCCTCACTCGCAT 58.363 47.619 0.00 0.00 0.00 4.73
281 282 0.039618 GGTGGCCCAATTTCTCCTCA 59.960 55.000 0.00 0.00 0.00 3.86
303 304 1.083489 TAAGGCAAAGCAATCGACGG 58.917 50.000 0.00 0.00 0.00 4.79
304 305 3.405170 AATAAGGCAAAGCAATCGACG 57.595 42.857 0.00 0.00 0.00 5.12
314 315 5.263872 TGAAGGAGGGTAAATAAGGCAAA 57.736 39.130 0.00 0.00 0.00 3.68
316 317 4.726825 AGATGAAGGAGGGTAAATAAGGCA 59.273 41.667 0.00 0.00 0.00 4.75
334 335 3.127376 CGCACATTTTGGTGATGAGATGA 59.873 43.478 0.00 0.00 41.32 2.92
337 338 1.199789 GCGCACATTTTGGTGATGAGA 59.800 47.619 0.30 0.00 41.32 3.27
344 345 1.544724 ATGGTAGCGCACATTTTGGT 58.455 45.000 11.47 0.00 0.00 3.67
353 354 1.220749 GTGGAGGAATGGTAGCGCA 59.779 57.895 11.47 0.00 0.00 6.09
355 356 0.462047 GGTGTGGAGGAATGGTAGCG 60.462 60.000 0.00 0.00 0.00 4.26
367 368 4.270153 AGGGCAGAGGGGTGTGGA 62.270 66.667 0.00 0.00 0.00 4.02
379 380 2.042537 ATGGAGAGCTCGAGGGCA 60.043 61.111 15.58 0.00 34.17 5.36
381 382 2.206536 GGGATGGAGAGCTCGAGGG 61.207 68.421 15.58 0.00 0.00 4.30
418 419 0.534873 TAGTGCCGCTTATGTGCTCA 59.465 50.000 0.00 0.00 0.00 4.26
430 431 1.300233 GCCGGAGAAGATAGTGCCG 60.300 63.158 5.05 0.00 41.53 5.69
436 437 3.129300 CGCAGGCCGGAGAAGATA 58.871 61.111 5.05 0.00 0.00 1.98
450 451 2.137528 TCTCTGTTGGACCACCGCA 61.138 57.895 0.00 0.00 39.42 5.69
464 465 5.279685 AGATGAGGAAGAAGGATTGTCTCT 58.720 41.667 0.00 0.00 0.00 3.10
476 477 5.683876 AATTTCGGAGAAGATGAGGAAGA 57.316 39.130 0.00 0.00 45.90 2.87
477 478 6.019479 CGTTAATTTCGGAGAAGATGAGGAAG 60.019 42.308 0.00 0.00 45.90 3.46
492 493 1.976045 GCAGTTGTGGCGTTAATTTCG 59.024 47.619 0.00 0.00 0.00 3.46
497 498 0.515127 CGATGCAGTTGTGGCGTTAA 59.485 50.000 0.00 0.00 0.00 2.01
502 503 2.800096 CAAACGATGCAGTTGTGGC 58.200 52.632 0.00 0.00 34.14 5.01
517 518 2.357760 GCGTAGTGGGTCGGCAAA 60.358 61.111 0.00 0.00 0.00 3.68
518 519 3.291101 GAGCGTAGTGGGTCGGCAA 62.291 63.158 0.00 0.00 0.00 4.52
526 527 0.036388 AATGGTGTGGAGCGTAGTGG 60.036 55.000 0.00 0.00 0.00 4.00
527 528 1.078709 CAATGGTGTGGAGCGTAGTG 58.921 55.000 0.00 0.00 0.00 2.74
528 529 0.036388 CCAATGGTGTGGAGCGTAGT 60.036 55.000 0.00 0.00 41.65 2.73
529 530 0.249120 TCCAATGGTGTGGAGCGTAG 59.751 55.000 0.00 0.00 42.97 3.51
530 531 2.367529 TCCAATGGTGTGGAGCGTA 58.632 52.632 0.00 0.00 42.97 4.42
531 532 3.156714 TCCAATGGTGTGGAGCGT 58.843 55.556 0.00 0.00 42.97 5.07
540 541 1.302949 CACGGGTGGATCCAATGGT 59.697 57.895 18.20 11.45 38.11 3.55
541 542 0.748005 GACACGGGTGGATCCAATGG 60.748 60.000 18.20 10.76 38.11 3.16
543 544 1.220749 CGACACGGGTGGATCCAAT 59.779 57.895 18.20 0.00 38.11 3.16
544 545 2.660206 CGACACGGGTGGATCCAA 59.340 61.111 18.20 0.00 38.11 3.53
546 547 3.771160 AGCGACACGGGTGGATCC 61.771 66.667 3.11 4.20 34.19 3.36
547 548 2.509336 CAGCGACACGGGTGGATC 60.509 66.667 3.11 0.00 34.19 3.36
548 549 4.760047 GCAGCGACACGGGTGGAT 62.760 66.667 3.11 0.00 35.99 3.41
578 792 4.828925 GAGCTCAGGGACAGCCGC 62.829 72.222 9.40 0.00 37.63 6.53
599 813 2.266055 GGAACTCAGGGACGGCAG 59.734 66.667 0.00 0.00 0.00 4.85
601 815 2.266055 CTGGAACTCAGGGACGGC 59.734 66.667 0.00 0.00 39.76 5.68
608 822 3.980010 CCGACTGCGACTGGAACTCAG 62.980 61.905 0.00 0.00 41.01 3.35
609 823 1.285950 CGACTGCGACTGGAACTCA 59.714 57.895 0.00 0.00 40.82 3.41
610 824 1.444553 CCGACTGCGACTGGAACTC 60.445 63.158 0.00 0.00 40.82 3.01
611 825 2.651361 CCGACTGCGACTGGAACT 59.349 61.111 0.00 0.00 40.82 3.01
612 826 3.112709 GCCGACTGCGACTGGAAC 61.113 66.667 0.00 0.00 40.82 3.62
654 868 4.253257 GTACGGAGGAGCTCGGCG 62.253 72.222 7.83 0.00 34.78 6.46
690 904 1.299976 GATCCAACGGCAGGGAAGT 59.700 57.895 0.00 0.00 36.62 3.01
695 909 2.264480 TGACGATCCAACGGCAGG 59.736 61.111 0.00 0.00 46.60 4.85
700 914 3.125146 ACATGAAACATGACGATCCAACG 59.875 43.478 16.86 0.00 39.31 4.10
704 918 3.009723 ACCACATGAAACATGACGATCC 58.990 45.455 16.86 0.00 0.00 3.36
706 920 4.326826 AGAACCACATGAAACATGACGAT 58.673 39.130 16.86 3.01 0.00 3.73
708 922 3.498018 TGAGAACCACATGAAACATGACG 59.502 43.478 16.86 9.15 0.00 4.35
775 989 3.297134 AGGTGTGGACAGAAAATGTGT 57.703 42.857 0.00 0.00 44.17 3.72
786 1000 3.487120 AGACTGGTTTTAGGTGTGGAC 57.513 47.619 0.00 0.00 0.00 4.02
795 1009 6.938698 TGTGATACCCTAAGACTGGTTTTA 57.061 37.500 0.00 0.00 36.04 1.52
804 1018 7.516209 AGCCCTATAATTTGTGATACCCTAAGA 59.484 37.037 0.00 0.00 0.00 2.10
805 1019 7.607991 CAGCCCTATAATTTGTGATACCCTAAG 59.392 40.741 0.00 0.00 0.00 2.18
808 1022 5.372661 ACAGCCCTATAATTTGTGATACCCT 59.627 40.000 0.00 0.00 0.00 4.34
809 1023 5.631119 ACAGCCCTATAATTTGTGATACCC 58.369 41.667 0.00 0.00 0.00 3.69
810 1024 7.284489 TCAAACAGCCCTATAATTTGTGATACC 59.716 37.037 0.00 0.00 33.10 2.73
811 1025 8.220755 TCAAACAGCCCTATAATTTGTGATAC 57.779 34.615 0.00 0.00 33.10 2.24
812 1026 8.815565 TTCAAACAGCCCTATAATTTGTGATA 57.184 30.769 0.00 0.00 33.10 2.15
813 1027 7.716799 TTCAAACAGCCCTATAATTTGTGAT 57.283 32.000 0.00 0.00 33.10 3.06
814 1028 7.531857 TTTCAAACAGCCCTATAATTTGTGA 57.468 32.000 0.00 0.00 33.10 3.58
815 1029 7.872483 AGTTTTCAAACAGCCCTATAATTTGTG 59.128 33.333 5.26 0.00 41.30 3.33
816 1030 7.962441 AGTTTTCAAACAGCCCTATAATTTGT 58.038 30.769 5.26 0.00 41.30 2.83
838 1064 6.304624 CCTGAACTTTTCCTAGGGTTTAGTT 58.695 40.000 9.46 13.03 0.00 2.24
839 1065 5.222068 CCCTGAACTTTTCCTAGGGTTTAGT 60.222 44.000 9.46 5.02 42.52 2.24
869 1095 7.186804 TGTTTGTTTCTCGAGAGAATTTCAAC 58.813 34.615 15.94 14.91 45.78 3.18
899 1143 2.647802 CCCAAGGAAAGGAAAGAGGGTA 59.352 50.000 0.00 0.00 0.00 3.69
904 1148 0.251165 CGGCCCAAGGAAAGGAAAGA 60.251 55.000 0.00 0.00 0.00 2.52
934 1178 0.248215 GTGTGCTGTGTGTGTGAAGC 60.248 55.000 0.00 0.00 36.18 3.86
962 1217 0.891373 GAGGGCTTGGGCTTTCTTTC 59.109 55.000 0.00 0.00 38.73 2.62
1146 1415 2.365105 TAGGAGGCGGGGTTGGAG 60.365 66.667 0.00 0.00 0.00 3.86
1148 1417 4.157120 CGTAGGAGGCGGGGTTGG 62.157 72.222 0.00 0.00 0.00 3.77
1557 1832 3.902086 GCGGGGAGAGCGTAGTCC 61.902 72.222 0.00 0.00 0.00 3.85
2051 2328 4.111375 AGCTCGTGTAGTGTAGATTTGG 57.889 45.455 0.00 0.00 0.00 3.28
2055 2339 7.563888 TTTACATAGCTCGTGTAGTGTAGAT 57.436 36.000 10.63 0.00 33.92 1.98
2291 2601 5.125097 CAGATGTATGCCAAAAGAAGCTTCT 59.875 40.000 23.49 23.49 39.74 2.85
2491 2840 1.304134 AAATCCCGGACAACCAGCC 60.304 57.895 0.73 0.00 35.59 4.85
2534 2883 7.358830 CACTCTGAAAGAAGAATTTGAGGAAC 58.641 38.462 0.00 0.00 46.34 3.62
2603 2952 3.243301 ACTTGCGATACATACGATCCGTT 60.243 43.478 0.00 0.00 41.54 4.44
2625 2974 2.075566 TGTGCCTCAGGGACACCAA 61.076 57.895 15.31 0.00 46.66 3.67
2684 3034 1.625818 ACGAAGCCTTCAGGAACAGAT 59.374 47.619 5.14 0.00 37.39 2.90
2727 3077 0.175989 GGGTCGCCGAGAGAGAAATT 59.824 55.000 0.00 0.00 0.00 1.82
2735 3085 2.358247 GCAAAAGGGTCGCCGAGA 60.358 61.111 0.00 0.00 0.00 4.04
2774 3124 5.034878 TCATGATGATAGCCCAGGTGATAT 58.965 41.667 0.00 0.00 0.00 1.63
2775 3125 4.428570 TCATGATGATAGCCCAGGTGATA 58.571 43.478 0.00 0.00 0.00 2.15
2777 3127 2.636403 CTCATGATGATAGCCCAGGTGA 59.364 50.000 0.00 0.00 0.00 4.02
2778 3128 2.290134 CCTCATGATGATAGCCCAGGTG 60.290 54.545 0.00 0.00 0.00 4.00
2779 3129 1.983691 CCTCATGATGATAGCCCAGGT 59.016 52.381 0.00 0.00 0.00 4.00
2783 3134 4.530161 ACTTACTCCTCATGATGATAGCCC 59.470 45.833 0.00 0.00 0.00 5.19
2863 3214 4.750098 CACTGAAAACACATCTCTAACGGT 59.250 41.667 0.00 0.00 0.00 4.83
2935 3313 6.534079 ACAATTATACTGCTAACTTCGACACC 59.466 38.462 0.00 0.00 0.00 4.16
3004 3382 2.162681 GGTCTGTAATTGCCAGCAAGT 58.837 47.619 11.21 10.80 39.47 3.16
3178 3556 5.278022 GCATAAAGAAAATCCGATCAGGGAC 60.278 44.000 0.00 0.00 39.34 4.46
3182 3560 6.183360 ACAAGGCATAAAGAAAATCCGATCAG 60.183 38.462 0.00 0.00 0.00 2.90
3188 3566 8.607441 AGAAAAACAAGGCATAAAGAAAATCC 57.393 30.769 0.00 0.00 0.00 3.01
3219 3628 2.025131 TGAAGCAATGTCATCCCCATGA 60.025 45.455 0.00 0.00 36.62 3.07
3230 3639 4.851843 TCTGATCAAGGATGAAGCAATGT 58.148 39.130 0.00 0.00 39.49 2.71
3232 3641 6.605995 TGAAATCTGATCAAGGATGAAGCAAT 59.394 34.615 0.00 0.00 39.49 3.56
3233 3642 5.947566 TGAAATCTGATCAAGGATGAAGCAA 59.052 36.000 0.00 0.00 39.49 3.91
3234 3643 5.503002 TGAAATCTGATCAAGGATGAAGCA 58.497 37.500 0.00 0.00 39.49 3.91
3237 3646 5.752650 AGCTGAAATCTGATCAAGGATGAA 58.247 37.500 0.00 0.00 39.49 2.57
3243 3652 6.985059 TCTACATGAGCTGAAATCTGATCAAG 59.015 38.462 11.37 9.87 42.00 3.02
3245 3654 6.475596 TCTACATGAGCTGAAATCTGATCA 57.524 37.500 10.05 10.05 42.66 2.92
3246 3655 7.495279 ACTTTCTACATGAGCTGAAATCTGATC 59.505 37.037 0.00 0.00 0.00 2.92
3247 3656 7.337167 ACTTTCTACATGAGCTGAAATCTGAT 58.663 34.615 0.00 0.00 0.00 2.90
3248 3657 6.705302 ACTTTCTACATGAGCTGAAATCTGA 58.295 36.000 0.00 0.00 0.00 3.27
3249 3658 6.981762 ACTTTCTACATGAGCTGAAATCTG 57.018 37.500 0.00 0.00 0.00 2.90
3250 3659 7.615403 TGTACTTTCTACATGAGCTGAAATCT 58.385 34.615 0.00 0.00 0.00 2.40
3251 3660 7.834068 TGTACTTTCTACATGAGCTGAAATC 57.166 36.000 0.00 0.54 0.00 2.17
3267 3676 7.328493 GGGCTTTGTAATTCATGTTGTACTTTC 59.672 37.037 0.00 0.00 0.00 2.62
3340 4117 7.648039 TCTTAGTAGATCTTCAGAACCTTCC 57.352 40.000 0.00 0.00 0.00 3.46
3376 4153 0.706433 ATGGGGTGGCTCAGAATTGT 59.294 50.000 0.00 0.00 0.00 2.71
3430 4207 4.430137 TGCAGAAAAATCATCACAGCTC 57.570 40.909 0.00 0.00 0.00 4.09
3473 4250 0.682209 CATTCCTCACTGGGGCAAGG 60.682 60.000 0.00 0.00 36.20 3.61
3498 4340 2.774044 GCTTCAGCTCTAACAGGCC 58.226 57.895 0.00 0.00 38.21 5.19
3544 4386 1.754226 CCTCTCCTCTTCTTCTTCCCG 59.246 57.143 0.00 0.00 0.00 5.14
3548 4390 4.325816 CCCTCTACCTCTCCTCTTCTTCTT 60.326 50.000 0.00 0.00 0.00 2.52
3583 4425 1.141053 GATAAGGGGTGTAGGGTGCAG 59.859 57.143 0.00 0.00 0.00 4.41
3585 4427 1.416772 GAGATAAGGGGTGTAGGGTGC 59.583 57.143 0.00 0.00 0.00 5.01
3586 4428 2.700897 CTGAGATAAGGGGTGTAGGGTG 59.299 54.545 0.00 0.00 0.00 4.61
3587 4429 2.960104 GCTGAGATAAGGGGTGTAGGGT 60.960 54.545 0.00 0.00 0.00 4.34
3592 4434 0.617820 ACGGCTGAGATAAGGGGTGT 60.618 55.000 0.00 0.00 0.00 4.16
3609 4462 1.205655 TGAATCTCAAGGAGCTGGACG 59.794 52.381 0.00 0.00 0.00 4.79
3765 4624 4.578928 GCCAGTCAGACTAAGTTTTTGGAA 59.421 41.667 1.67 0.00 0.00 3.53
3798 4657 9.995003 TTGCCATTTTGATTATGTAGTCTTTTT 57.005 25.926 0.00 0.00 0.00 1.94
3803 4662 6.694411 CAGCTTGCCATTTTGATTATGTAGTC 59.306 38.462 0.00 0.00 0.00 2.59
3824 4683 1.318576 GTTTGGTACAGTTGCCAGCT 58.681 50.000 0.00 0.00 42.39 4.24
3864 4723 8.776470 CAAATTATTGCACTTCACTTCCATTTT 58.224 29.630 0.00 0.00 0.00 1.82
3866 4725 7.444299 ACAAATTATTGCACTTCACTTCCATT 58.556 30.769 0.00 0.00 40.34 3.16
3893 4752 6.767902 TCTTTTGAACTGAACTTCTGCTACAT 59.232 34.615 0.00 0.00 0.00 2.29
3895 4754 6.604735 TCTTTTGAACTGAACTTCTGCTAC 57.395 37.500 0.00 0.00 0.00 3.58
3896 4755 7.041098 GGATTCTTTTGAACTGAACTTCTGCTA 60.041 37.037 0.00 0.00 41.77 3.49
3897 4756 6.238869 GGATTCTTTTGAACTGAACTTCTGCT 60.239 38.462 0.00 0.00 41.77 4.24
3898 4757 5.917447 GGATTCTTTTGAACTGAACTTCTGC 59.083 40.000 0.00 0.00 41.77 4.26
3900 4759 5.239525 CGGGATTCTTTTGAACTGAACTTCT 59.760 40.000 0.00 0.00 41.77 2.85
3901 4760 5.452777 CGGGATTCTTTTGAACTGAACTTC 58.547 41.667 0.00 0.00 41.77 3.01
3903 4762 3.253432 GCGGGATTCTTTTGAACTGAACT 59.747 43.478 0.00 0.00 41.77 3.01
3905 4764 3.218453 TGCGGGATTCTTTTGAACTGAA 58.782 40.909 0.00 0.00 41.77 3.02
3906 4765 2.857483 TGCGGGATTCTTTTGAACTGA 58.143 42.857 0.00 0.00 41.77 3.41
3907 4766 3.004734 ACTTGCGGGATTCTTTTGAACTG 59.995 43.478 0.00 0.00 41.77 3.16
3908 4767 3.004734 CACTTGCGGGATTCTTTTGAACT 59.995 43.478 0.00 0.00 41.77 3.01
3909 4768 3.243401 ACACTTGCGGGATTCTTTTGAAC 60.243 43.478 0.00 0.00 41.77 3.18
3910 4769 2.955660 ACACTTGCGGGATTCTTTTGAA 59.044 40.909 0.00 0.00 43.30 2.69
3912 4771 3.369546 AACACTTGCGGGATTCTTTTG 57.630 42.857 0.00 0.00 0.00 2.44
3913 4772 5.523438 TTAAACACTTGCGGGATTCTTTT 57.477 34.783 0.00 0.00 0.00 2.27
3914 4773 5.523438 TTTAAACACTTGCGGGATTCTTT 57.477 34.783 0.00 0.00 0.00 2.52
3915 4774 5.523438 TTTTAAACACTTGCGGGATTCTT 57.477 34.783 0.00 0.00 0.00 2.52
3916 4775 5.722021 ATTTTAAACACTTGCGGGATTCT 57.278 34.783 0.00 0.00 0.00 2.40
3917 4776 7.810759 TCTTAATTTTAAACACTTGCGGGATTC 59.189 33.333 0.00 0.00 0.00 2.52
3918 4777 7.662897 TCTTAATTTTAAACACTTGCGGGATT 58.337 30.769 0.00 0.00 0.00 3.01
3920 4779 6.636562 TCTTAATTTTAAACACTTGCGGGA 57.363 33.333 0.00 0.00 0.00 5.14
3921 4780 7.383843 ACATTCTTAATTTTAAACACTTGCGGG 59.616 33.333 0.00 0.00 0.00 6.13
3922 4781 8.293114 ACATTCTTAATTTTAAACACTTGCGG 57.707 30.769 0.00 0.00 0.00 5.69
3934 4793 8.632679 TGCTCTGTTCTGAACATTCTTAATTTT 58.367 29.630 22.28 0.00 41.26 1.82
3935 4794 8.169977 TGCTCTGTTCTGAACATTCTTAATTT 57.830 30.769 22.28 0.00 41.26 1.82
3937 4796 7.750229 TTGCTCTGTTCTGAACATTCTTAAT 57.250 32.000 22.28 0.00 41.26 1.40
3938 4797 7.566760 TTTGCTCTGTTCTGAACATTCTTAA 57.433 32.000 22.28 11.98 41.26 1.85
3939 4798 7.066887 TGTTTTGCTCTGTTCTGAACATTCTTA 59.933 33.333 22.28 7.10 41.26 2.10
3941 4800 5.357878 TGTTTTGCTCTGTTCTGAACATTCT 59.642 36.000 22.28 0.00 41.26 2.40
3943 4802 5.581126 TGTTTTGCTCTGTTCTGAACATT 57.419 34.783 22.28 0.00 41.26 2.71
3944 4803 5.779529 ATGTTTTGCTCTGTTCTGAACAT 57.220 34.783 22.28 2.20 41.26 2.71
3945 4804 6.054941 TCTATGTTTTGCTCTGTTCTGAACA 58.945 36.000 20.95 20.95 39.52 3.18
3946 4805 6.545504 TCTATGTTTTGCTCTGTTCTGAAC 57.454 37.500 13.49 13.49 0.00 3.18
3948 4807 5.702670 CCTTCTATGTTTTGCTCTGTTCTGA 59.297 40.000 0.00 0.00 0.00 3.27
3949 4808 5.106396 CCCTTCTATGTTTTGCTCTGTTCTG 60.106 44.000 0.00 0.00 0.00 3.02
3950 4809 5.006386 CCCTTCTATGTTTTGCTCTGTTCT 58.994 41.667 0.00 0.00 0.00 3.01
3951 4810 4.156739 CCCCTTCTATGTTTTGCTCTGTTC 59.843 45.833 0.00 0.00 0.00 3.18
3952 4811 4.082125 CCCCTTCTATGTTTTGCTCTGTT 58.918 43.478 0.00 0.00 0.00 3.16
3953 4812 3.562176 CCCCCTTCTATGTTTTGCTCTGT 60.562 47.826 0.00 0.00 0.00 3.41
3954 4813 3.019564 CCCCCTTCTATGTTTTGCTCTG 58.980 50.000 0.00 0.00 0.00 3.35
3955 4814 2.919602 TCCCCCTTCTATGTTTTGCTCT 59.080 45.455 0.00 0.00 0.00 4.09
3956 4815 3.054361 TCTCCCCCTTCTATGTTTTGCTC 60.054 47.826 0.00 0.00 0.00 4.26
3958 4817 3.366052 TCTCCCCCTTCTATGTTTTGC 57.634 47.619 0.00 0.00 0.00 3.68
3959 4818 4.018415 TCCTTCTCCCCCTTCTATGTTTTG 60.018 45.833 0.00 0.00 0.00 2.44
3960 4819 4.183916 TCCTTCTCCCCCTTCTATGTTTT 58.816 43.478 0.00 0.00 0.00 2.43
3961 4820 3.815507 TCCTTCTCCCCCTTCTATGTTT 58.184 45.455 0.00 0.00 0.00 2.83
3962 4821 3.508952 TCCTTCTCCCCCTTCTATGTT 57.491 47.619 0.00 0.00 0.00 2.71
3963 4822 3.116174 GTTCCTTCTCCCCCTTCTATGT 58.884 50.000 0.00 0.00 0.00 2.29
3966 4825 1.360162 TCGTTCCTTCTCCCCCTTCTA 59.640 52.381 0.00 0.00 0.00 2.10
3967 4826 0.116541 TCGTTCCTTCTCCCCCTTCT 59.883 55.000 0.00 0.00 0.00 2.85
3968 4827 0.249676 GTCGTTCCTTCTCCCCCTTC 59.750 60.000 0.00 0.00 0.00 3.46
3969 4828 1.199425 GGTCGTTCCTTCTCCCCCTT 61.199 60.000 0.00 0.00 0.00 3.95
3970 4829 1.612739 GGTCGTTCCTTCTCCCCCT 60.613 63.158 0.00 0.00 0.00 4.79
3971 4830 1.272554 ATGGTCGTTCCTTCTCCCCC 61.273 60.000 1.80 0.00 37.07 5.40
3973 4832 0.902531 TCATGGTCGTTCCTTCTCCC 59.097 55.000 0.00 0.00 37.07 4.30
3974 4833 2.555199 CATCATGGTCGTTCCTTCTCC 58.445 52.381 0.00 0.00 37.07 3.71
3975 4834 1.936547 GCATCATGGTCGTTCCTTCTC 59.063 52.381 0.00 0.00 37.07 2.87
3977 4836 1.737838 TGCATCATGGTCGTTCCTTC 58.262 50.000 0.00 0.00 37.07 3.46
3978 4837 2.086869 CTTGCATCATGGTCGTTCCTT 58.913 47.619 0.00 0.00 37.07 3.36
3980 4839 1.737838 TCTTGCATCATGGTCGTTCC 58.262 50.000 0.00 0.00 0.00 3.62
3981 4840 4.100529 CAAATCTTGCATCATGGTCGTTC 58.899 43.478 0.00 0.00 0.00 3.95
3982 4841 3.507233 ACAAATCTTGCATCATGGTCGTT 59.493 39.130 0.00 0.00 0.00 3.85
3983 4842 3.084039 ACAAATCTTGCATCATGGTCGT 58.916 40.909 0.00 0.00 0.00 4.34
3984 4843 3.431856 CACAAATCTTGCATCATGGTCG 58.568 45.455 0.00 0.00 0.00 4.79
3985 4844 3.119245 AGCACAAATCTTGCATCATGGTC 60.119 43.478 0.00 0.00 42.83 4.02
3987 4846 3.520290 AGCACAAATCTTGCATCATGG 57.480 42.857 0.00 0.00 42.83 3.66
3988 4847 4.142337 TGGTAGCACAAATCTTGCATCATG 60.142 41.667 0.00 0.00 42.83 3.07
3989 4848 4.018490 TGGTAGCACAAATCTTGCATCAT 58.982 39.130 0.00 0.00 42.83 2.45
3990 4849 3.191162 GTGGTAGCACAAATCTTGCATCA 59.809 43.478 19.87 0.00 42.83 3.07
3991 4850 3.441572 AGTGGTAGCACAAATCTTGCATC 59.558 43.478 25.75 0.00 42.83 3.91
3992 4851 3.424703 AGTGGTAGCACAAATCTTGCAT 58.575 40.909 25.75 0.00 42.83 3.96
3995 4854 5.633830 ATTGAGTGGTAGCACAAATCTTG 57.366 39.130 25.75 0.00 0.00 3.02
3996 4855 6.265196 TCAAATTGAGTGGTAGCACAAATCTT 59.735 34.615 25.75 16.37 0.00 2.40
3997 4856 5.769662 TCAAATTGAGTGGTAGCACAAATCT 59.230 36.000 25.75 10.07 0.00 2.40
3998 4857 6.012658 TCAAATTGAGTGGTAGCACAAATC 57.987 37.500 25.75 15.37 0.00 2.17
3999 4858 6.403866 TTCAAATTGAGTGGTAGCACAAAT 57.596 33.333 25.75 20.27 0.00 2.32
4001 4860 4.278170 CCTTCAAATTGAGTGGTAGCACAA 59.722 41.667 25.75 13.38 0.00 3.33
4003 4862 3.821033 ACCTTCAAATTGAGTGGTAGCAC 59.179 43.478 17.29 17.29 34.76 4.40
4005 4864 4.327680 AGACCTTCAAATTGAGTGGTAGC 58.672 43.478 17.96 10.09 35.98 3.58
4008 4867 7.181125 AGACTATAGACCTTCAAATTGAGTGGT 59.819 37.037 17.97 17.97 37.61 4.16
4009 4868 7.560368 AGACTATAGACCTTCAAATTGAGTGG 58.440 38.462 6.78 13.05 0.00 4.00
4010 4869 9.442047 AAAGACTATAGACCTTCAAATTGAGTG 57.558 33.333 6.78 0.00 0.00 3.51
4011 4870 9.660180 GAAAGACTATAGACCTTCAAATTGAGT 57.340 33.333 6.78 0.00 0.00 3.41
4012 4871 9.883142 AGAAAGACTATAGACCTTCAAATTGAG 57.117 33.333 6.78 0.00 0.00 3.02
4018 4877 9.529823 TGAGTAAGAAAGACTATAGACCTTCAA 57.470 33.333 6.78 0.00 0.00 2.69
4019 4878 9.529823 TTGAGTAAGAAAGACTATAGACCTTCA 57.470 33.333 6.78 0.12 0.00 3.02
4022 4881 9.482175 ACATTGAGTAAGAAAGACTATAGACCT 57.518 33.333 6.78 0.12 0.00 3.85
4072 4931 9.793252 GCTGACAATTACAATAATCTGAACATT 57.207 29.630 0.00 0.00 0.00 2.71
4073 4932 8.124823 CGCTGACAATTACAATAATCTGAACAT 58.875 33.333 0.00 0.00 0.00 2.71
4074 4933 7.119116 ACGCTGACAATTACAATAATCTGAACA 59.881 33.333 0.00 0.00 0.00 3.18
4075 4934 7.464358 ACGCTGACAATTACAATAATCTGAAC 58.536 34.615 0.00 0.00 0.00 3.18
4076 4935 7.549134 AGACGCTGACAATTACAATAATCTGAA 59.451 33.333 0.00 0.00 0.00 3.02
4077 4936 7.041721 AGACGCTGACAATTACAATAATCTGA 58.958 34.615 0.00 0.00 0.00 3.27
4078 4937 7.239166 AGACGCTGACAATTACAATAATCTG 57.761 36.000 0.00 0.00 0.00 2.90
4079 4938 7.549134 TCAAGACGCTGACAATTACAATAATCT 59.451 33.333 0.00 0.00 0.00 2.40
4080 4939 7.684670 TCAAGACGCTGACAATTACAATAATC 58.315 34.615 0.00 0.00 0.00 1.75
4081 4940 7.609760 TCAAGACGCTGACAATTACAATAAT 57.390 32.000 0.00 0.00 0.00 1.28
4082 4941 7.609760 ATCAAGACGCTGACAATTACAATAA 57.390 32.000 0.00 0.00 0.00 1.40
4083 4942 7.438160 CCTATCAAGACGCTGACAATTACAATA 59.562 37.037 0.00 0.00 0.00 1.90
4084 4943 6.258727 CCTATCAAGACGCTGACAATTACAAT 59.741 38.462 0.00 0.00 0.00 2.71
4085 4944 5.580691 CCTATCAAGACGCTGACAATTACAA 59.419 40.000 0.00 0.00 0.00 2.41
4086 4945 5.109210 CCTATCAAGACGCTGACAATTACA 58.891 41.667 0.00 0.00 0.00 2.41
4087 4946 4.025647 GCCTATCAAGACGCTGACAATTAC 60.026 45.833 0.00 0.00 0.00 1.89
4089 4948 2.939103 GCCTATCAAGACGCTGACAATT 59.061 45.455 0.00 0.00 0.00 2.32
4090 4949 2.555199 GCCTATCAAGACGCTGACAAT 58.445 47.619 0.00 0.00 0.00 2.71
4091 4950 1.405526 GGCCTATCAAGACGCTGACAA 60.406 52.381 0.00 0.00 0.00 3.18
4092 4951 0.175760 GGCCTATCAAGACGCTGACA 59.824 55.000 0.00 0.00 0.00 3.58
4093 4952 0.461961 AGGCCTATCAAGACGCTGAC 59.538 55.000 1.29 0.00 0.00 3.51
4094 4953 1.137086 GAAGGCCTATCAAGACGCTGA 59.863 52.381 5.16 0.00 0.00 4.26
4095 4954 1.576356 GAAGGCCTATCAAGACGCTG 58.424 55.000 5.16 0.00 0.00 5.18
4096 4955 0.466124 GGAAGGCCTATCAAGACGCT 59.534 55.000 5.16 0.00 0.00 5.07
4097 4956 0.466124 AGGAAGGCCTATCAAGACGC 59.534 55.000 5.16 0.00 44.74 5.19
4099 4958 3.389329 TCATCAGGAAGGCCTATCAAGAC 59.611 47.826 5.16 0.00 44.80 3.01
4100 4959 3.657610 TCATCAGGAAGGCCTATCAAGA 58.342 45.455 5.16 8.16 44.80 3.02
4101 4960 4.325119 CATCATCAGGAAGGCCTATCAAG 58.675 47.826 5.16 2.87 44.80 3.02
4102 4961 3.073503 CCATCATCAGGAAGGCCTATCAA 59.926 47.826 5.16 0.00 44.80 2.57
4104 4963 2.909006 TCCATCATCAGGAAGGCCTATC 59.091 50.000 5.16 6.00 44.80 2.08
4105 4964 2.995746 TCCATCATCAGGAAGGCCTAT 58.004 47.619 5.16 0.00 44.80 2.57
4106 4965 2.494888 TCCATCATCAGGAAGGCCTA 57.505 50.000 5.16 0.00 44.80 3.93
4108 4967 1.144503 ACATCCATCATCAGGAAGGCC 59.855 52.381 0.00 0.00 38.93 5.19
4110 4969 3.894759 ACAACATCCATCATCAGGAAGG 58.105 45.455 0.00 0.00 38.93 3.46
4111 4970 4.337555 GGAACAACATCCATCATCAGGAAG 59.662 45.833 0.00 0.00 38.93 3.46
4112 4971 4.263860 TGGAACAACATCCATCATCAGGAA 60.264 41.667 0.00 0.00 44.52 3.36
4113 4972 3.266513 TGGAACAACATCCATCATCAGGA 59.733 43.478 0.00 0.00 44.52 3.86
4114 4973 3.623703 TGGAACAACATCCATCATCAGG 58.376 45.455 0.00 0.00 44.52 3.86
4123 4982 6.789059 AAGAGGCAATCTTGGAACAACATCC 61.789 44.000 2.84 0.00 46.80 3.51
4125 5277 4.154942 AAGAGGCAATCTTGGAACAACAT 58.845 39.130 2.84 0.00 46.80 2.71
4136 5288 0.846427 TGGGGGACAAGAGGCAATCT 60.846 55.000 0.00 0.00 41.27 2.40
4141 5293 2.034221 GTGTGGGGGACAAGAGGC 59.966 66.667 0.00 0.00 35.91 4.70
4145 5297 1.553690 ATCTCGGTGTGGGGGACAAG 61.554 60.000 0.00 0.00 35.91 3.16
4146 5298 1.537889 ATCTCGGTGTGGGGGACAA 60.538 57.895 0.00 0.00 35.91 3.18
4147 5299 2.121832 ATCTCGGTGTGGGGGACA 59.878 61.111 0.00 0.00 0.00 4.02
4149 5301 0.620410 AATCATCTCGGTGTGGGGGA 60.620 55.000 0.00 0.00 0.00 4.81
4150 5302 0.179045 GAATCATCTCGGTGTGGGGG 60.179 60.000 0.00 0.00 0.00 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.