Multiple sequence alignment - TraesCS3B01G462100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G462100 chr3B 100.000 4877 0 0 1 4877 705146197 705151073 0.000000e+00 9007.0
1 TraesCS3B01G462100 chr3D 93.524 3150 122 22 1764 4877 532869500 532872603 0.000000e+00 4612.0
2 TraesCS3B01G462100 chr3D 91.404 570 23 7 1190 1745 532868856 532869413 0.000000e+00 758.0
3 TraesCS3B01G462100 chr3D 85.144 451 24 15 751 1195 532868378 532868791 5.840000e-114 422.0
4 TraesCS3B01G462100 chr3D 85.385 130 7 7 519 647 532863371 532863489 1.840000e-24 124.0
5 TraesCS3B01G462100 chr3D 98.113 53 1 0 636 688 532868299 532868351 5.200000e-15 93.5
6 TraesCS3B01G462100 chr3A 92.358 3036 120 34 1766 4759 668583109 668586074 0.000000e+00 4218.0
7 TraesCS3B01G462100 chr3A 88.718 2987 180 52 1973 4877 668225506 668228417 0.000000e+00 3504.0
8 TraesCS3B01G462100 chr3A 86.231 1271 59 36 526 1745 668581836 668583041 0.000000e+00 1271.0
9 TraesCS3B01G462100 chr3A 87.330 442 33 14 1 430 668219568 668219998 7.340000e-133 484.0
10 TraesCS3B01G462100 chr3A 91.623 191 15 1 4570 4759 668586673 668586863 3.740000e-66 263.0
11 TraesCS3B01G462100 chr3A 82.946 129 4 9 354 478 668581724 668581838 3.110000e-17 100.0
12 TraesCS3B01G462100 chr1D 86.175 1830 161 42 2339 4146 226468249 226470008 0.000000e+00 1893.0
13 TraesCS3B01G462100 chr1D 78.551 1063 119 61 2952 3948 223164049 223165068 2.510000e-167 599.0
14 TraesCS3B01G462100 chr1D 83.080 591 75 15 3334 3923 226827660 226828226 9.360000e-142 514.0
15 TraesCS3B01G462100 chr1D 86.937 444 49 3 2509 2951 208415555 208415120 1.580000e-134 490.0
16 TraesCS3B01G462100 chr1D 87.032 401 28 8 1941 2333 226467830 226468214 9.700000e-117 431.0
17 TraesCS3B01G462100 chr1D 82.672 479 63 9 1851 2327 457547999 457547539 1.630000e-109 407.0
18 TraesCS3B01G462100 chr1D 81.781 494 60 16 1851 2335 457844647 457845119 2.130000e-103 387.0
19 TraesCS3B01G462100 chr1D 85.619 299 30 2 1382 1680 226467524 226467809 7.930000e-78 302.0
20 TraesCS3B01G462100 chr1D 82.749 342 46 7 1764 2100 457582909 457583242 4.770000e-75 292.0
21 TraesCS3B01G462100 chr1D 84.158 303 38 6 1446 1745 457582554 457582849 7.990000e-73 285.0
22 TraesCS3B01G462100 chr1D 89.744 117 8 2 1414 1530 227653056 227653168 3.930000e-31 147.0
23 TraesCS3B01G462100 chr1D 76.451 293 46 18 2952 3230 227649334 227649617 2.370000e-28 137.0
24 TraesCS3B01G462100 chr1D 88.182 110 11 1 1764 1873 457812593 457812700 3.960000e-26 130.0
25 TraesCS3B01G462100 chr1D 81.169 154 15 4 2339 2489 457845153 457845295 1.430000e-20 111.0
26 TraesCS3B01G462100 chr1D 95.122 41 2 0 629 669 226461165 226461205 1.130000e-06 65.8
27 TraesCS3B01G462100 chr1D 89.130 46 4 1 550 594 226461103 226461148 6.820000e-04 56.5
28 TraesCS3B01G462100 chr1D 100.000 29 0 0 3098 3126 208413265 208413237 2.000000e-03 54.7
29 TraesCS3B01G462100 chr1A 85.722 1842 159 44 2327 4146 293736643 293738402 0.000000e+00 1849.0
30 TraesCS3B01G462100 chr1A 82.251 862 100 29 2509 3335 338594615 338593772 0.000000e+00 695.0
31 TraesCS3B01G462100 chr1A 83.920 597 59 14 3352 3948 290126627 290127186 2.000000e-148 536.0
32 TraesCS3B01G462100 chr1A 82.463 479 68 8 1851 2327 550137219 550136755 5.880000e-109 405.0
33 TraesCS3B01G462100 chr1A 80.567 494 66 17 1851 2335 550298781 550299253 2.160000e-93 353.0
34 TraesCS3B01G462100 chr1A 87.043 301 17 12 2041 2333 293736332 293736618 2.190000e-83 320.0
35 TraesCS3B01G462100 chr1A 84.106 302 40 6 1446 1745 550298310 550298605 7.990000e-73 285.0
36 TraesCS3B01G462100 chr1A 90.541 148 14 0 1414 1561 293731233 293731380 3.850000e-46 196.0
37 TraesCS3B01G462100 chr1A 85.890 163 22 1 2108 2270 550217712 550217873 6.490000e-39 172.0
38 TraesCS3B01G462100 chr1A 89.286 84 7 1 1764 1847 550204042 550204123 2.400000e-18 104.0
39 TraesCS3B01G462100 chr1A 88.889 54 1 4 621 669 293730772 293730825 1.470000e-05 62.1
40 TraesCS3B01G462100 chr1A 89.130 46 4 1 550 594 293730723 293730768 6.820000e-04 56.5
41 TraesCS3B01G462100 chr7B 84.591 954 95 32 2187 3126 41285182 41286097 0.000000e+00 900.0
42 TraesCS3B01G462100 chr7B 83.721 430 49 13 3199 3610 41286233 41286659 2.130000e-103 387.0
43 TraesCS3B01G462100 chr7B 86.942 291 30 3 1764 2054 41284904 41285186 2.190000e-83 320.0
44 TraesCS3B01G462100 chr7B 84.568 162 18 4 3939 4098 41287005 41287161 2.350000e-33 154.0
45 TraesCS3B01G462100 chr7D 86.569 752 74 16 2187 2925 90409255 90409992 0.000000e+00 804.0
46 TraesCS3B01G462100 chr7D 81.690 923 80 51 3199 4098 90410250 90411106 0.000000e+00 686.0
47 TraesCS3B01G462100 chr7D 82.886 298 35 10 1764 2054 90408971 90409259 2.250000e-63 254.0
48 TraesCS3B01G462100 chr1B 82.924 773 96 21 2509 3265 350442734 350441982 0.000000e+00 664.0
49 TraesCS3B01G462100 chr1B 84.965 572 57 12 3352 3923 322475701 322476243 1.980000e-153 553.0
50 TraesCS3B01G462100 chr1B 87.075 441 51 2 2509 2948 327343235 327343670 1.220000e-135 494.0
51 TraesCS3B01G462100 chr1B 80.663 543 66 16 3415 3957 350441799 350441296 7.660000e-103 385.0
52 TraesCS3B01G462100 chr1B 86.957 207 22 5 2120 2324 627157371 627157168 1.370000e-55 228.0
53 TraesCS3B01G462100 chr1B 89.744 117 8 2 1414 1530 327347923 327348035 3.930000e-31 147.0
54 TraesCS3B01G462100 chr1B 79.386 228 26 16 2108 2335 627782292 627782498 1.830000e-29 141.0
55 TraesCS3B01G462100 chr1B 81.283 187 24 7 1414 1598 665246288 665246111 1.830000e-29 141.0
56 TraesCS3B01G462100 chr1B 81.290 155 14 9 2339 2489 627923929 627924072 1.430000e-20 111.0
57 TraesCS3B01G462100 chr7A 87.097 93 8 2 1073 1161 91640496 91640588 8.640000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G462100 chr3B 705146197 705151073 4876 False 9007.000000 9007 100.000000 1 4877 1 chr3B.!!$F1 4876
1 TraesCS3B01G462100 chr3D 532868299 532872603 4304 False 1471.375000 4612 92.046250 636 4877 4 chr3D.!!$F2 4241
2 TraesCS3B01G462100 chr3A 668225506 668228417 2911 False 3504.000000 3504 88.718000 1973 4877 1 chr3A.!!$F2 2904
3 TraesCS3B01G462100 chr3A 668581724 668586863 5139 False 1463.000000 4218 88.289500 354 4759 4 chr3A.!!$F3 4405
4 TraesCS3B01G462100 chr1D 226467524 226470008 2484 False 875.333333 1893 86.275333 1382 4146 3 chr1D.!!$F5 2764
5 TraesCS3B01G462100 chr1D 223164049 223165068 1019 False 599.000000 599 78.551000 2952 3948 1 chr1D.!!$F1 996
6 TraesCS3B01G462100 chr1D 226827660 226828226 566 False 514.000000 514 83.080000 3334 3923 1 chr1D.!!$F2 589
7 TraesCS3B01G462100 chr1D 457582554 457583242 688 False 288.500000 292 83.453500 1446 2100 2 chr1D.!!$F7 654
8 TraesCS3B01G462100 chr1D 208413237 208415555 2318 True 272.350000 490 93.468500 2509 3126 2 chr1D.!!$R2 617
9 TraesCS3B01G462100 chr1D 457844647 457845295 648 False 249.000000 387 81.475000 1851 2489 2 chr1D.!!$F8 638
10 TraesCS3B01G462100 chr1A 293736332 293738402 2070 False 1084.500000 1849 86.382500 2041 4146 2 chr1A.!!$F5 2105
11 TraesCS3B01G462100 chr1A 338593772 338594615 843 True 695.000000 695 82.251000 2509 3335 1 chr1A.!!$R1 826
12 TraesCS3B01G462100 chr1A 290126627 290127186 559 False 536.000000 536 83.920000 3352 3948 1 chr1A.!!$F1 596
13 TraesCS3B01G462100 chr1A 550298310 550299253 943 False 319.000000 353 82.336500 1446 2335 2 chr1A.!!$F6 889
14 TraesCS3B01G462100 chr7B 41284904 41287161 2257 False 440.250000 900 84.955500 1764 4098 4 chr7B.!!$F1 2334
15 TraesCS3B01G462100 chr7D 90408971 90411106 2135 False 581.333333 804 83.715000 1764 4098 3 chr7D.!!$F1 2334
16 TraesCS3B01G462100 chr1B 322475701 322476243 542 False 553.000000 553 84.965000 3352 3923 1 chr1B.!!$F1 571
17 TraesCS3B01G462100 chr1B 350441296 350442734 1438 True 524.500000 664 81.793500 2509 3957 2 chr1B.!!$R3 1448

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 319 0.035630 AAGTCATGTGGCTCAGCTCC 60.036 55.0 0.00 0.0 0.00 4.70 F
322 323 0.035725 CATGTGGCTCAGCTCCTCAA 60.036 55.0 0.00 0.0 31.80 3.02 F
325 326 0.036022 GTGGCTCAGCTCCTCAAACT 59.964 55.0 0.00 0.0 0.00 2.66 F
1028 1070 0.105964 GCCGGGAGCACATGTATGTA 59.894 55.0 2.18 0.0 42.97 2.29 F
2491 2844 0.603569 ACACTGCTAGCTACAACGCT 59.396 50.0 17.23 0.0 43.83 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2249 2531 1.521423 GTGTGACGCACAGTACAGAAC 59.479 52.381 14.22 0.00 45.43 3.01 R
2343 2670 3.375647 TCCCCCTGGTTAGCATTTAAC 57.624 47.619 0.00 0.00 0.00 2.01 R
2385 2724 5.356882 ACATATAATCAACATTTCCGCGG 57.643 39.130 22.12 22.12 0.00 6.46 R
3068 5189 5.005012 TCGTTCTTGAATTTTCTATACGCCG 59.995 40.000 0.00 0.00 0.00 6.46 R
4385 6929 1.072332 AACATAGTGTGGCGTGCCA 59.928 52.632 10.06 10.06 45.02 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 98 4.992381 AAAACTGGAGAAGATCGAAACG 57.008 40.909 0.00 0.00 0.00 3.60
98 99 2.656560 ACTGGAGAAGATCGAAACGG 57.343 50.000 0.00 0.00 0.00 4.44
99 100 2.168496 ACTGGAGAAGATCGAAACGGA 58.832 47.619 0.00 0.00 0.00 4.69
100 101 2.561419 ACTGGAGAAGATCGAAACGGAA 59.439 45.455 0.00 0.00 0.00 4.30
101 102 3.006537 ACTGGAGAAGATCGAAACGGAAA 59.993 43.478 0.00 0.00 0.00 3.13
102 103 3.994392 CTGGAGAAGATCGAAACGGAAAA 59.006 43.478 0.00 0.00 0.00 2.29
103 104 4.382291 TGGAGAAGATCGAAACGGAAAAA 58.618 39.130 0.00 0.00 0.00 1.94
104 105 4.212636 TGGAGAAGATCGAAACGGAAAAAC 59.787 41.667 0.00 0.00 0.00 2.43
105 106 4.378149 GGAGAAGATCGAAACGGAAAAACC 60.378 45.833 0.00 0.00 0.00 3.27
106 107 4.131596 AGAAGATCGAAACGGAAAAACCA 58.868 39.130 0.00 0.00 38.90 3.67
107 108 3.891056 AGATCGAAACGGAAAAACCAC 57.109 42.857 0.00 0.00 38.90 4.16
108 109 3.207778 AGATCGAAACGGAAAAACCACA 58.792 40.909 0.00 0.00 38.90 4.17
109 110 3.628487 AGATCGAAACGGAAAAACCACAA 59.372 39.130 0.00 0.00 38.90 3.33
110 111 3.408288 TCGAAACGGAAAAACCACAAG 57.592 42.857 0.00 0.00 38.90 3.16
111 112 3.008330 TCGAAACGGAAAAACCACAAGA 58.992 40.909 0.00 0.00 38.90 3.02
112 113 3.439476 TCGAAACGGAAAAACCACAAGAA 59.561 39.130 0.00 0.00 38.90 2.52
113 114 4.082895 TCGAAACGGAAAAACCACAAGAAA 60.083 37.500 0.00 0.00 38.90 2.52
114 115 4.621886 CGAAACGGAAAAACCACAAGAAAA 59.378 37.500 0.00 0.00 38.90 2.29
115 116 5.118817 CGAAACGGAAAAACCACAAGAAAAA 59.881 36.000 0.00 0.00 38.90 1.94
134 135 5.427036 AAAAACGGTCTGCGAAAATAAGA 57.573 34.783 0.00 0.00 0.00 2.10
135 136 5.427036 AAAACGGTCTGCGAAAATAAGAA 57.573 34.783 0.00 0.00 0.00 2.52
136 137 5.622770 AAACGGTCTGCGAAAATAAGAAT 57.377 34.783 0.00 0.00 0.00 2.40
137 138 4.600012 ACGGTCTGCGAAAATAAGAATG 57.400 40.909 0.00 0.00 0.00 2.67
138 139 4.000988 ACGGTCTGCGAAAATAAGAATGT 58.999 39.130 0.00 0.00 0.00 2.71
139 140 4.142902 ACGGTCTGCGAAAATAAGAATGTG 60.143 41.667 0.00 0.00 0.00 3.21
140 141 4.098416 GGTCTGCGAAAATAAGAATGTGC 58.902 43.478 0.00 0.00 0.00 4.57
141 142 4.379394 GGTCTGCGAAAATAAGAATGTGCA 60.379 41.667 0.00 0.00 0.00 4.57
142 143 5.335127 GTCTGCGAAAATAAGAATGTGCAT 58.665 37.500 0.00 0.00 0.00 3.96
143 144 6.458206 GGTCTGCGAAAATAAGAATGTGCATA 60.458 38.462 0.00 0.00 0.00 3.14
144 145 6.412072 GTCTGCGAAAATAAGAATGTGCATAC 59.588 38.462 0.00 0.00 0.00 2.39
145 146 6.093357 TCTGCGAAAATAAGAATGTGCATACA 59.907 34.615 0.00 0.00 41.89 2.29
154 155 4.277239 GTGCATACACGTGGCAGA 57.723 55.556 21.57 2.11 38.38 4.26
155 156 2.767536 GTGCATACACGTGGCAGAT 58.232 52.632 21.57 4.61 38.38 2.90
156 157 0.374758 GTGCATACACGTGGCAGATG 59.625 55.000 21.57 17.05 38.38 2.90
157 158 0.036483 TGCATACACGTGGCAGATGT 60.036 50.000 21.57 8.48 32.95 3.06
158 159 0.374758 GCATACACGTGGCAGATGTG 59.625 55.000 21.57 12.09 45.83 3.21
176 177 3.084579 CGTGTGCGCTCTGAATCC 58.915 61.111 9.73 0.00 0.00 3.01
177 178 1.446792 CGTGTGCGCTCTGAATCCT 60.447 57.895 9.73 0.00 0.00 3.24
178 179 1.690283 CGTGTGCGCTCTGAATCCTG 61.690 60.000 9.73 0.00 0.00 3.86
179 180 1.078918 TGTGCGCTCTGAATCCTGG 60.079 57.895 9.73 0.00 0.00 4.45
180 181 1.817099 GTGCGCTCTGAATCCTGGG 60.817 63.158 9.73 0.00 0.00 4.45
181 182 2.203126 GCGCTCTGAATCCTGGGG 60.203 66.667 0.00 0.00 0.00 4.96
182 183 2.735772 GCGCTCTGAATCCTGGGGA 61.736 63.158 0.00 0.00 35.55 4.81
183 184 2.049627 GCGCTCTGAATCCTGGGGAT 62.050 60.000 0.00 0.00 45.46 3.85
184 185 1.342074 CGCTCTGAATCCTGGGGATA 58.658 55.000 0.00 0.00 42.27 2.59
185 186 1.905215 CGCTCTGAATCCTGGGGATAT 59.095 52.381 0.00 0.00 42.27 1.63
186 187 2.354503 CGCTCTGAATCCTGGGGATATG 60.355 54.545 0.00 0.00 42.27 1.78
187 188 2.617532 GCTCTGAATCCTGGGGATATGC 60.618 54.545 0.00 0.00 42.27 3.14
188 189 2.641321 CTCTGAATCCTGGGGATATGCA 59.359 50.000 0.00 0.00 42.27 3.96
189 190 3.262842 TCTGAATCCTGGGGATATGCAT 58.737 45.455 3.79 3.79 42.27 3.96
190 191 3.009805 TCTGAATCCTGGGGATATGCATG 59.990 47.826 10.16 0.00 42.27 4.06
191 192 2.042026 TGAATCCTGGGGATATGCATGG 59.958 50.000 10.16 0.00 42.27 3.66
192 193 1.764327 ATCCTGGGGATATGCATGGT 58.236 50.000 10.16 0.00 41.16 3.55
193 194 0.773014 TCCTGGGGATATGCATGGTG 59.227 55.000 10.16 0.00 0.00 4.17
194 195 0.896940 CCTGGGGATATGCATGGTGC 60.897 60.000 10.16 3.05 45.29 5.01
195 196 0.111832 CTGGGGATATGCATGGTGCT 59.888 55.000 10.16 0.00 45.31 4.40
196 197 0.557238 TGGGGATATGCATGGTGCTT 59.443 50.000 10.16 0.00 45.31 3.91
197 198 1.251251 GGGGATATGCATGGTGCTTC 58.749 55.000 10.16 0.00 45.31 3.86
198 199 1.251251 GGGATATGCATGGTGCTTCC 58.749 55.000 10.16 5.85 45.31 3.46
215 216 5.927115 GTGCTTCCACCAACTAGTATATAGC 59.073 44.000 0.00 0.37 35.92 2.97
216 217 5.600898 TGCTTCCACCAACTAGTATATAGCA 59.399 40.000 0.00 3.04 0.00 3.49
217 218 5.927115 GCTTCCACCAACTAGTATATAGCAC 59.073 44.000 0.00 0.00 0.00 4.40
218 219 6.462487 GCTTCCACCAACTAGTATATAGCACA 60.462 42.308 0.00 0.00 0.00 4.57
219 220 7.426606 TTCCACCAACTAGTATATAGCACAA 57.573 36.000 0.00 0.00 0.00 3.33
220 221 7.612065 TCCACCAACTAGTATATAGCACAAT 57.388 36.000 0.00 0.00 0.00 2.71
221 222 7.667557 TCCACCAACTAGTATATAGCACAATC 58.332 38.462 0.00 0.00 0.00 2.67
222 223 7.509318 TCCACCAACTAGTATATAGCACAATCT 59.491 37.037 0.00 0.00 0.00 2.40
223 224 7.815068 CCACCAACTAGTATATAGCACAATCTC 59.185 40.741 0.00 0.00 0.00 2.75
224 225 8.360390 CACCAACTAGTATATAGCACAATCTCA 58.640 37.037 0.00 0.00 0.00 3.27
225 226 9.094578 ACCAACTAGTATATAGCACAATCTCAT 57.905 33.333 0.00 0.00 0.00 2.90
226 227 9.579768 CCAACTAGTATATAGCACAATCTCATC 57.420 37.037 0.00 0.00 0.00 2.92
232 233 9.872721 AGTATATAGCACAATCTCATCAATCAG 57.127 33.333 0.00 0.00 0.00 2.90
233 234 5.943706 ATAGCACAATCTCATCAATCAGC 57.056 39.130 0.00 0.00 0.00 4.26
234 235 3.887352 AGCACAATCTCATCAATCAGCT 58.113 40.909 0.00 0.00 0.00 4.24
235 236 3.878103 AGCACAATCTCATCAATCAGCTC 59.122 43.478 0.00 0.00 0.00 4.09
236 237 3.003482 GCACAATCTCATCAATCAGCTCC 59.997 47.826 0.00 0.00 0.00 4.70
237 238 4.452825 CACAATCTCATCAATCAGCTCCT 58.547 43.478 0.00 0.00 0.00 3.69
238 239 4.882427 CACAATCTCATCAATCAGCTCCTT 59.118 41.667 0.00 0.00 0.00 3.36
239 240 4.882427 ACAATCTCATCAATCAGCTCCTTG 59.118 41.667 0.00 0.00 0.00 3.61
240 241 4.774660 ATCTCATCAATCAGCTCCTTGT 57.225 40.909 5.04 0.00 0.00 3.16
241 242 4.564782 TCTCATCAATCAGCTCCTTGTT 57.435 40.909 5.04 0.00 0.00 2.83
242 243 4.511527 TCTCATCAATCAGCTCCTTGTTC 58.488 43.478 5.04 0.00 0.00 3.18
243 244 4.224594 TCTCATCAATCAGCTCCTTGTTCT 59.775 41.667 5.04 0.00 0.00 3.01
244 245 4.914983 TCATCAATCAGCTCCTTGTTCTT 58.085 39.130 5.04 0.00 0.00 2.52
245 246 4.698780 TCATCAATCAGCTCCTTGTTCTTG 59.301 41.667 5.04 0.00 0.00 3.02
246 247 4.090761 TCAATCAGCTCCTTGTTCTTGT 57.909 40.909 5.04 0.00 0.00 3.16
247 248 4.067896 TCAATCAGCTCCTTGTTCTTGTC 58.932 43.478 5.04 0.00 0.00 3.18
248 249 2.550830 TCAGCTCCTTGTTCTTGTCC 57.449 50.000 0.00 0.00 0.00 4.02
249 250 1.768275 TCAGCTCCTTGTTCTTGTCCA 59.232 47.619 0.00 0.00 0.00 4.02
250 251 2.149578 CAGCTCCTTGTTCTTGTCCAG 58.850 52.381 0.00 0.00 0.00 3.86
251 252 1.771255 AGCTCCTTGTTCTTGTCCAGT 59.229 47.619 0.00 0.00 0.00 4.00
252 253 2.173569 AGCTCCTTGTTCTTGTCCAGTT 59.826 45.455 0.00 0.00 0.00 3.16
253 254 3.391296 AGCTCCTTGTTCTTGTCCAGTTA 59.609 43.478 0.00 0.00 0.00 2.24
254 255 4.134563 GCTCCTTGTTCTTGTCCAGTTAA 58.865 43.478 0.00 0.00 0.00 2.01
255 256 4.214332 GCTCCTTGTTCTTGTCCAGTTAAG 59.786 45.833 0.00 0.00 0.00 1.85
256 257 4.134563 TCCTTGTTCTTGTCCAGTTAAGC 58.865 43.478 0.00 0.00 0.00 3.09
257 258 3.253432 CCTTGTTCTTGTCCAGTTAAGCC 59.747 47.826 0.00 0.00 0.00 4.35
258 259 3.857157 TGTTCTTGTCCAGTTAAGCCT 57.143 42.857 0.00 0.00 0.00 4.58
259 260 4.164843 TGTTCTTGTCCAGTTAAGCCTT 57.835 40.909 0.00 0.00 0.00 4.35
260 261 4.532834 TGTTCTTGTCCAGTTAAGCCTTT 58.467 39.130 0.00 0.00 0.00 3.11
261 262 4.578928 TGTTCTTGTCCAGTTAAGCCTTTC 59.421 41.667 0.00 0.00 0.00 2.62
262 263 4.706842 TCTTGTCCAGTTAAGCCTTTCT 57.293 40.909 0.00 0.00 0.00 2.52
263 264 4.642429 TCTTGTCCAGTTAAGCCTTTCTC 58.358 43.478 0.00 0.00 0.00 2.87
264 265 4.102524 TCTTGTCCAGTTAAGCCTTTCTCA 59.897 41.667 0.00 0.00 0.00 3.27
265 266 4.640771 TGTCCAGTTAAGCCTTTCTCAT 57.359 40.909 0.00 0.00 0.00 2.90
266 267 4.326826 TGTCCAGTTAAGCCTTTCTCATG 58.673 43.478 0.00 0.00 0.00 3.07
267 268 3.691609 GTCCAGTTAAGCCTTTCTCATGG 59.308 47.826 0.00 0.00 0.00 3.66
275 276 1.457346 CCTTTCTCATGGCACTGTCC 58.543 55.000 0.00 0.00 0.00 4.02
276 277 1.271543 CCTTTCTCATGGCACTGTCCA 60.272 52.381 0.00 2.26 40.97 4.02
277 278 1.808945 CTTTCTCATGGCACTGTCCAC 59.191 52.381 0.00 0.00 39.25 4.02
278 279 0.036732 TTCTCATGGCACTGTCCACC 59.963 55.000 0.00 0.00 39.25 4.61
279 280 1.126948 TCTCATGGCACTGTCCACCA 61.127 55.000 0.00 0.00 39.25 4.17
280 281 0.250858 CTCATGGCACTGTCCACCAA 60.251 55.000 0.00 0.00 39.25 3.67
281 282 0.405198 TCATGGCACTGTCCACCAAT 59.595 50.000 0.00 0.00 39.25 3.16
282 283 0.528924 CATGGCACTGTCCACCAATG 59.471 55.000 0.00 0.00 39.25 2.82
283 284 1.252904 ATGGCACTGTCCACCAATGC 61.253 55.000 0.00 0.00 39.25 3.56
284 285 2.964978 GCACTGTCCACCAATGCC 59.035 61.111 0.00 0.00 0.00 4.40
285 286 1.902918 GCACTGTCCACCAATGCCA 60.903 57.895 0.00 0.00 0.00 4.92
286 287 1.252904 GCACTGTCCACCAATGCCAT 61.253 55.000 0.00 0.00 0.00 4.40
287 288 0.528924 CACTGTCCACCAATGCCATG 59.471 55.000 0.00 0.00 0.00 3.66
288 289 0.405198 ACTGTCCACCAATGCCATGA 59.595 50.000 0.00 0.00 0.00 3.07
289 290 0.813184 CTGTCCACCAATGCCATGAC 59.187 55.000 0.00 0.00 0.00 3.06
290 291 0.611618 TGTCCACCAATGCCATGACC 60.612 55.000 0.00 0.00 0.00 4.02
291 292 0.323725 GTCCACCAATGCCATGACCT 60.324 55.000 0.00 0.00 0.00 3.85
292 293 1.064758 GTCCACCAATGCCATGACCTA 60.065 52.381 0.00 0.00 0.00 3.08
293 294 1.638070 TCCACCAATGCCATGACCTAA 59.362 47.619 0.00 0.00 0.00 2.69
294 295 2.026641 CCACCAATGCCATGACCTAAG 58.973 52.381 0.00 0.00 0.00 2.18
295 296 2.026641 CACCAATGCCATGACCTAAGG 58.973 52.381 0.00 0.00 0.00 2.69
296 297 1.922447 ACCAATGCCATGACCTAAGGA 59.078 47.619 0.00 0.00 0.00 3.36
297 298 2.311542 ACCAATGCCATGACCTAAGGAA 59.688 45.455 0.00 0.00 0.00 3.36
298 299 2.689983 CCAATGCCATGACCTAAGGAAC 59.310 50.000 0.00 0.00 0.00 3.62
299 300 3.355378 CAATGCCATGACCTAAGGAACA 58.645 45.455 0.00 0.00 0.00 3.18
300 301 3.737559 ATGCCATGACCTAAGGAACAA 57.262 42.857 0.00 0.00 0.00 2.83
301 302 3.071874 TGCCATGACCTAAGGAACAAG 57.928 47.619 0.00 0.00 0.00 3.16
302 303 2.375174 TGCCATGACCTAAGGAACAAGT 59.625 45.455 0.00 0.00 0.00 3.16
303 304 3.010420 GCCATGACCTAAGGAACAAGTC 58.990 50.000 0.00 0.00 0.00 3.01
304 305 3.559171 GCCATGACCTAAGGAACAAGTCA 60.559 47.826 0.00 0.00 0.00 3.41
305 306 4.848357 CCATGACCTAAGGAACAAGTCAT 58.152 43.478 0.00 0.00 0.00 3.06
306 307 4.637534 CCATGACCTAAGGAACAAGTCATG 59.362 45.833 19.51 19.51 43.43 3.07
307 308 4.974645 TGACCTAAGGAACAAGTCATGT 57.025 40.909 0.00 0.00 46.82 3.21
308 309 4.641396 TGACCTAAGGAACAAGTCATGTG 58.359 43.478 0.00 0.00 42.99 3.21
309 310 4.003648 GACCTAAGGAACAAGTCATGTGG 58.996 47.826 0.00 0.00 42.99 4.17
310 311 2.749621 CCTAAGGAACAAGTCATGTGGC 59.250 50.000 0.00 0.00 42.99 5.01
311 312 2.664402 AAGGAACAAGTCATGTGGCT 57.336 45.000 0.00 0.00 42.99 4.75
312 313 2.191128 AGGAACAAGTCATGTGGCTC 57.809 50.000 0.00 0.00 42.99 4.70
313 314 1.421268 AGGAACAAGTCATGTGGCTCA 59.579 47.619 0.00 0.00 42.99 4.26
314 315 1.808945 GGAACAAGTCATGTGGCTCAG 59.191 52.381 0.00 0.00 42.99 3.35
315 316 1.198637 GAACAAGTCATGTGGCTCAGC 59.801 52.381 0.00 0.00 42.99 4.26
316 317 0.399454 ACAAGTCATGTGGCTCAGCT 59.601 50.000 0.00 0.00 41.93 4.24
317 318 1.085091 CAAGTCATGTGGCTCAGCTC 58.915 55.000 0.00 0.00 0.00 4.09
318 319 0.035630 AAGTCATGTGGCTCAGCTCC 60.036 55.000 0.00 0.00 0.00 4.70
319 320 0.908656 AGTCATGTGGCTCAGCTCCT 60.909 55.000 0.00 0.00 0.00 3.69
320 321 0.461693 GTCATGTGGCTCAGCTCCTC 60.462 60.000 0.00 0.00 0.00 3.71
321 322 0.906282 TCATGTGGCTCAGCTCCTCA 60.906 55.000 0.00 0.00 0.00 3.86
322 323 0.035725 CATGTGGCTCAGCTCCTCAA 60.036 55.000 0.00 0.00 31.80 3.02
323 324 0.694771 ATGTGGCTCAGCTCCTCAAA 59.305 50.000 0.00 0.00 31.80 2.69
324 325 0.250467 TGTGGCTCAGCTCCTCAAAC 60.250 55.000 0.00 0.00 0.00 2.93
325 326 0.036022 GTGGCTCAGCTCCTCAAACT 59.964 55.000 0.00 0.00 0.00 2.66
326 327 0.322975 TGGCTCAGCTCCTCAAACTC 59.677 55.000 0.00 0.00 0.00 3.01
327 328 0.739112 GGCTCAGCTCCTCAAACTCG 60.739 60.000 0.00 0.00 0.00 4.18
328 329 0.739112 GCTCAGCTCCTCAAACTCGG 60.739 60.000 0.00 0.00 0.00 4.63
329 330 0.739112 CTCAGCTCCTCAAACTCGGC 60.739 60.000 0.00 0.00 0.00 5.54
330 331 1.743252 CAGCTCCTCAAACTCGGCC 60.743 63.158 0.00 0.00 0.00 6.13
331 332 2.436824 GCTCCTCAAACTCGGCCC 60.437 66.667 0.00 0.00 0.00 5.80
332 333 2.960688 GCTCCTCAAACTCGGCCCT 61.961 63.158 0.00 0.00 0.00 5.19
333 334 1.679898 CTCCTCAAACTCGGCCCTT 59.320 57.895 0.00 0.00 0.00 3.95
334 335 0.674895 CTCCTCAAACTCGGCCCTTG 60.675 60.000 0.00 0.00 0.00 3.61
335 336 1.125093 TCCTCAAACTCGGCCCTTGA 61.125 55.000 0.00 0.40 0.00 3.02
336 337 0.955919 CCTCAAACTCGGCCCTTGAC 60.956 60.000 0.00 0.00 0.00 3.18
337 338 1.291877 CTCAAACTCGGCCCTTGACG 61.292 60.000 0.00 0.00 0.00 4.35
338 339 1.597027 CAAACTCGGCCCTTGACGT 60.597 57.895 0.00 0.00 0.00 4.34
339 340 1.147600 AAACTCGGCCCTTGACGTT 59.852 52.632 0.00 0.00 0.00 3.99
340 341 0.883370 AAACTCGGCCCTTGACGTTC 60.883 55.000 0.00 0.00 0.00 3.95
341 342 2.434359 CTCGGCCCTTGACGTTCC 60.434 66.667 0.00 0.00 0.00 3.62
342 343 3.952628 CTCGGCCCTTGACGTTCCC 62.953 68.421 0.00 0.00 0.00 3.97
343 344 4.323477 CGGCCCTTGACGTTCCCA 62.323 66.667 0.00 0.00 0.00 4.37
344 345 2.114411 GGCCCTTGACGTTCCCAA 59.886 61.111 0.00 0.00 0.00 4.12
345 346 1.971695 GGCCCTTGACGTTCCCAAG 60.972 63.158 8.18 8.18 40.37 3.61
346 347 1.228154 GCCCTTGACGTTCCCAAGT 60.228 57.895 12.78 0.00 39.36 3.16
347 348 1.235281 GCCCTTGACGTTCCCAAGTC 61.235 60.000 12.78 3.17 39.36 3.01
348 349 0.605589 CCCTTGACGTTCCCAAGTCC 60.606 60.000 12.78 0.00 39.36 3.85
349 350 0.949105 CCTTGACGTTCCCAAGTCCG 60.949 60.000 12.78 0.00 39.36 4.79
350 351 0.249741 CTTGACGTTCCCAAGTCCGT 60.250 55.000 7.19 0.00 36.99 4.69
351 352 0.531090 TTGACGTTCCCAAGTCCGTG 60.531 55.000 0.00 0.00 36.61 4.94
352 353 2.280592 ACGTTCCCAAGTCCGTGC 60.281 61.111 0.00 0.00 31.43 5.34
366 367 4.481072 AGTCCGTGCCCTAGAGTAATTAT 58.519 43.478 0.00 0.00 0.00 1.28
369 370 6.208994 AGTCCGTGCCCTAGAGTAATTATTAG 59.791 42.308 0.00 0.00 0.00 1.73
370 371 5.479375 TCCGTGCCCTAGAGTAATTATTAGG 59.521 44.000 11.11 11.11 33.89 2.69
389 394 4.691326 AGGGCTAGGTTGATTAGTTAGC 57.309 45.455 0.00 0.00 36.80 3.09
411 416 1.546961 AAGTCCTCCCTCTGTACGTG 58.453 55.000 0.00 0.00 0.00 4.49
416 421 0.243907 CTCCCTCTGTACGTGGTGTG 59.756 60.000 0.00 0.00 0.00 3.82
417 422 1.374252 CCCTCTGTACGTGGTGTGC 60.374 63.158 0.00 0.00 0.00 4.57
419 424 0.885879 CCTCTGTACGTGGTGTGCTA 59.114 55.000 0.00 0.00 33.83 3.49
421 426 0.242825 TCTGTACGTGGTGTGCTAGC 59.757 55.000 8.10 8.10 33.83 3.42
422 427 0.243907 CTGTACGTGGTGTGCTAGCT 59.756 55.000 17.23 0.00 33.83 3.32
423 428 1.471287 CTGTACGTGGTGTGCTAGCTA 59.529 52.381 17.23 1.87 33.83 3.32
424 429 1.471287 TGTACGTGGTGTGCTAGCTAG 59.529 52.381 16.84 16.84 33.83 3.42
475 480 5.884792 AGTTGTCTGTTAGCGGTATACTAGT 59.115 40.000 0.00 0.00 0.00 2.57
476 481 5.998454 TGTCTGTTAGCGGTATACTAGTC 57.002 43.478 0.00 0.00 0.00 2.59
477 482 4.818546 TGTCTGTTAGCGGTATACTAGTCC 59.181 45.833 0.00 0.00 0.00 3.85
478 483 4.060900 TCTGTTAGCGGTATACTAGTCCG 58.939 47.826 15.30 15.30 45.94 4.79
479 484 3.141398 TGTTAGCGGTATACTAGTCCGG 58.859 50.000 19.65 0.00 43.77 5.14
483 488 3.544356 GCGGTATACTAGTCCGGTTAC 57.456 52.381 19.65 7.24 43.77 2.50
484 489 2.096218 GCGGTATACTAGTCCGGTTACG 60.096 54.545 19.65 9.37 43.77 3.18
496 501 2.284263 CGGTTACGGTTAGGTTCCTC 57.716 55.000 0.00 0.00 36.18 3.71
497 502 1.821136 CGGTTACGGTTAGGTTCCTCT 59.179 52.381 0.00 0.00 36.18 3.69
498 503 2.159324 CGGTTACGGTTAGGTTCCTCTC 60.159 54.545 0.00 0.00 36.18 3.20
499 504 2.167281 GGTTACGGTTAGGTTCCTCTCC 59.833 54.545 0.00 0.00 0.00 3.71
500 505 1.755179 TACGGTTAGGTTCCTCTCCG 58.245 55.000 22.57 22.57 42.94 4.63
501 506 1.141234 CGGTTAGGTTCCTCTCCGC 59.859 63.158 16.57 0.00 0.00 5.54
502 507 1.521141 GGTTAGGTTCCTCTCCGCC 59.479 63.158 0.00 0.00 0.00 6.13
503 508 0.976590 GGTTAGGTTCCTCTCCGCCT 60.977 60.000 0.00 0.00 35.28 5.52
504 509 0.175989 GTTAGGTTCCTCTCCGCCTG 59.824 60.000 0.00 0.00 32.90 4.85
505 510 0.976073 TTAGGTTCCTCTCCGCCTGG 60.976 60.000 0.00 0.00 32.90 4.45
506 511 4.475135 GGTTCCTCTCCGCCTGGC 62.475 72.222 9.11 9.11 34.14 4.85
507 512 3.394836 GTTCCTCTCCGCCTGGCT 61.395 66.667 17.92 0.00 34.14 4.75
508 513 2.058595 GTTCCTCTCCGCCTGGCTA 61.059 63.158 17.92 3.66 34.14 3.93
509 514 1.075226 TTCCTCTCCGCCTGGCTAT 60.075 57.895 17.92 0.00 34.14 2.97
510 515 0.187606 TTCCTCTCCGCCTGGCTATA 59.812 55.000 17.92 0.55 34.14 1.31
511 516 0.409876 TCCTCTCCGCCTGGCTATAT 59.590 55.000 17.92 0.00 34.14 0.86
512 517 1.639108 TCCTCTCCGCCTGGCTATATA 59.361 52.381 17.92 0.00 34.14 0.86
513 518 2.245028 TCCTCTCCGCCTGGCTATATAT 59.755 50.000 17.92 0.00 34.14 0.86
514 519 3.462205 TCCTCTCCGCCTGGCTATATATA 59.538 47.826 17.92 0.00 34.14 0.86
515 520 3.570550 CCTCTCCGCCTGGCTATATATAC 59.429 52.174 17.92 0.00 34.14 1.47
516 521 4.465886 CTCTCCGCCTGGCTATATATACT 58.534 47.826 17.92 0.00 34.14 2.12
517 522 5.456330 CCTCTCCGCCTGGCTATATATACTA 60.456 48.000 17.92 0.00 34.14 1.82
518 523 6.202202 TCTCCGCCTGGCTATATATACTAT 57.798 41.667 17.92 0.00 34.14 2.12
519 524 6.004574 TCTCCGCCTGGCTATATATACTATG 58.995 44.000 17.92 0.00 34.14 2.23
520 525 5.702266 TCCGCCTGGCTATATATACTATGT 58.298 41.667 17.92 0.00 34.14 2.29
521 526 6.844829 TCCGCCTGGCTATATATACTATGTA 58.155 40.000 17.92 0.00 34.14 2.29
522 527 6.940867 TCCGCCTGGCTATATATACTATGTAG 59.059 42.308 17.92 0.00 34.14 2.74
523 528 6.151312 CCGCCTGGCTATATATACTATGTAGG 59.849 46.154 17.92 0.00 0.00 3.18
524 529 6.715718 CGCCTGGCTATATATACTATGTAGGT 59.284 42.308 17.92 0.00 0.00 3.08
544 549 3.386726 GGTTCCATAAAAGCATAACCCCC 59.613 47.826 0.00 0.00 32.09 5.40
577 582 2.549282 CTCCAACAAACGCCGTCG 59.451 61.111 0.00 0.00 42.43 5.12
583 589 0.810823 AACAAACGCCGTCGAGGAAA 60.811 50.000 6.70 0.00 45.00 3.13
584 590 1.203313 CAAACGCCGTCGAGGAAAC 59.797 57.895 6.70 0.00 45.00 2.78
612 618 4.868195 GCAACCTGCGACAAATCC 57.132 55.556 0.00 0.00 31.71 3.01
613 619 1.956043 GCAACCTGCGACAAATCCA 59.044 52.632 0.00 0.00 31.71 3.41
614 620 0.109597 GCAACCTGCGACAAATCCAG 60.110 55.000 0.00 0.00 31.71 3.86
615 621 0.109597 CAACCTGCGACAAATCCAGC 60.110 55.000 0.00 0.00 0.00 4.85
616 622 0.250901 AACCTGCGACAAATCCAGCT 60.251 50.000 0.00 0.00 0.00 4.24
617 623 0.957395 ACCTGCGACAAATCCAGCTG 60.957 55.000 6.78 6.78 0.00 4.24
618 624 1.136147 CTGCGACAAATCCAGCTGC 59.864 57.895 8.66 0.00 0.00 5.25
619 625 1.579964 CTGCGACAAATCCAGCTGCA 61.580 55.000 8.66 0.00 0.00 4.41
678 684 0.169672 CGCCTTCTAGGTTTCGACGA 59.830 55.000 0.00 0.00 37.80 4.20
693 699 1.457303 CGACGACTTTCAGGCTTTCTG 59.543 52.381 0.00 0.00 44.68 3.02
695 701 1.202698 ACGACTTTCAGGCTTTCTGCT 60.203 47.619 0.00 0.00 43.06 4.24
698 704 1.876156 ACTTTCAGGCTTTCTGCTTCG 59.124 47.619 0.00 0.00 43.06 3.79
701 707 0.392706 TCAGGCTTTCTGCTTCGTCA 59.607 50.000 0.00 0.00 43.06 4.35
703 709 1.396301 CAGGCTTTCTGCTTCGTCATC 59.604 52.381 0.00 0.00 42.39 2.92
704 710 0.371645 GGCTTTCTGCTTCGTCATCG 59.628 55.000 0.00 0.00 42.39 3.84
705 711 1.071605 GCTTTCTGCTTCGTCATCGT 58.928 50.000 0.00 0.00 38.95 3.73
706 712 1.059835 GCTTTCTGCTTCGTCATCGTC 59.940 52.381 0.00 0.00 38.95 4.20
707 713 2.600731 CTTTCTGCTTCGTCATCGTCT 58.399 47.619 0.00 0.00 38.33 4.18
708 714 1.982612 TTCTGCTTCGTCATCGTCTG 58.017 50.000 0.00 0.00 38.33 3.51
749 766 4.619227 ACCTGTGGCGTGTTCCCG 62.619 66.667 0.00 0.00 0.00 5.14
765 782 1.913419 TCCCGCCTTAGACCTTTTGAT 59.087 47.619 0.00 0.00 0.00 2.57
766 783 2.017049 CCCGCCTTAGACCTTTTGATG 58.983 52.381 0.00 0.00 0.00 3.07
767 784 2.355716 CCCGCCTTAGACCTTTTGATGA 60.356 50.000 0.00 0.00 0.00 2.92
775 792 6.126940 CCTTAGACCTTTTGATGATCTCTCCA 60.127 42.308 0.00 0.00 0.00 3.86
778 795 6.729428 AGACCTTTTGATGATCTCTCCAATT 58.271 36.000 0.00 0.00 0.00 2.32
780 797 8.331740 AGACCTTTTGATGATCTCTCCAATTTA 58.668 33.333 0.00 0.00 0.00 1.40
781 798 8.517062 ACCTTTTGATGATCTCTCCAATTTAG 57.483 34.615 0.00 0.00 0.00 1.85
845 862 1.093972 TCCGCATTGTGGCAATACAG 58.906 50.000 11.54 0.00 32.51 2.74
846 863 0.810648 CCGCATTGTGGCAATACAGT 59.189 50.000 2.75 0.00 0.00 3.55
869 899 4.420168 ACATACGCATGGTTTTTGTATGC 58.580 39.130 9.80 0.00 43.76 3.14
870 900 2.362169 ACGCATGGTTTTTGTATGCC 57.638 45.000 0.00 0.00 43.12 4.40
871 901 1.892474 ACGCATGGTTTTTGTATGCCT 59.108 42.857 0.00 0.00 43.12 4.75
872 902 2.261345 CGCATGGTTTTTGTATGCCTG 58.739 47.619 0.00 0.00 43.12 4.85
873 903 2.001872 GCATGGTTTTTGTATGCCTGC 58.998 47.619 0.00 0.00 40.89 4.85
989 1031 3.169099 CAAGAGGAGACAAGAGGAAGGA 58.831 50.000 0.00 0.00 0.00 3.36
994 1036 1.206849 GAGACAAGAGGAAGGAGCAGG 59.793 57.143 0.00 0.00 0.00 4.85
1027 1069 1.153168 GCCGGGAGCACATGTATGT 60.153 57.895 2.18 0.00 42.97 2.29
1028 1070 0.105964 GCCGGGAGCACATGTATGTA 59.894 55.000 2.18 0.00 42.97 2.29
1032 1074 3.250762 CCGGGAGCACATGTATGTATTTG 59.749 47.826 0.00 0.00 39.39 2.32
1108 1151 2.124942 GGAAGCTCTTGCCCTCGG 60.125 66.667 0.00 0.00 40.80 4.63
1158 1204 2.291209 TGCATCACATTGTTGGTCCT 57.709 45.000 0.00 0.00 0.00 3.85
1166 1212 4.218200 TCACATTGTTGGTCCTAATGCTTG 59.782 41.667 11.55 6.33 35.71 4.01
1221 1338 2.041701 ACATGCAAAAGTGGCCTCTTT 58.958 42.857 23.85 23.85 39.00 2.52
1375 1510 9.764363 ATCTTAACATAGACAATTATTCTGCGA 57.236 29.630 0.00 0.00 0.00 5.10
1376 1511 9.249457 TCTTAACATAGACAATTATTCTGCGAG 57.751 33.333 0.00 0.00 0.00 5.03
1377 1512 6.851222 AACATAGACAATTATTCTGCGAGG 57.149 37.500 0.00 0.00 0.00 4.63
1378 1513 5.918608 ACATAGACAATTATTCTGCGAGGT 58.081 37.500 0.00 0.00 0.00 3.85
1379 1514 7.050970 ACATAGACAATTATTCTGCGAGGTA 57.949 36.000 0.00 0.00 0.00 3.08
1380 1515 7.671302 ACATAGACAATTATTCTGCGAGGTAT 58.329 34.615 0.00 0.00 0.00 2.73
1394 1529 5.387788 TGCGAGGTATTATTCTGTACCCTA 58.612 41.667 0.00 0.00 41.01 3.53
1399 1534 7.554959 AGGTATTATTCTGTACCCTACCATG 57.445 40.000 0.00 0.00 41.01 3.66
1597 1732 4.100344 ACAGGTGGTACGTATGCATCATAA 59.900 41.667 0.19 0.00 0.00 1.90
1730 1869 7.414540 GGGTGTTGATTACTCAGAAATCATGTC 60.415 40.741 0.00 0.00 41.62 3.06
1745 1884 3.995199 TCATGTCTCAGTCAGGTTGAAC 58.005 45.455 0.00 0.00 0.00 3.18
1746 1885 2.910688 TGTCTCAGTCAGGTTGAACC 57.089 50.000 6.16 6.16 38.99 3.62
1747 1886 1.068588 TGTCTCAGTCAGGTTGAACCG 59.931 52.381 8.98 4.33 44.90 4.44
1748 1887 1.068741 GTCTCAGTCAGGTTGAACCGT 59.931 52.381 8.98 0.00 44.90 4.83
1749 1888 1.760613 TCTCAGTCAGGTTGAACCGTT 59.239 47.619 8.98 0.00 44.90 4.44
1750 1889 1.867233 CTCAGTCAGGTTGAACCGTTG 59.133 52.381 8.98 2.83 44.90 4.10
1751 1890 1.483004 TCAGTCAGGTTGAACCGTTGA 59.517 47.619 8.98 5.43 44.90 3.18
1752 1891 2.093394 TCAGTCAGGTTGAACCGTTGAA 60.093 45.455 8.98 0.00 44.90 2.69
1774 1989 3.780925 GCAACCAGCATCAAGTGAC 57.219 52.632 0.00 0.00 44.79 3.67
1854 2106 2.743718 CCAGGTTCCTGCGAGTGT 59.256 61.111 12.88 0.00 33.07 3.55
2012 2264 6.058183 AGAGTATTGTGGATGCAAAGGTATC 58.942 40.000 0.00 0.00 35.62 2.24
2038 2296 7.572523 AGACTCATGAATGTGTTTCTTCAAA 57.427 32.000 0.00 0.00 35.20 2.69
2101 2365 4.108124 TCCTATTAGCTGGGAGTCCATACT 59.892 45.833 12.30 6.90 43.11 2.12
2183 2463 8.836268 TCAATACCTACAAGTTTCGTAACATT 57.164 30.769 7.69 0.00 36.70 2.71
2249 2531 2.118683 TGTTAAGTTTGTCCGTCGACG 58.881 47.619 30.33 30.33 42.37 5.12
2343 2670 6.390721 TCTCTTTTACTTTGATGACCTCTCG 58.609 40.000 0.00 0.00 0.00 4.04
2489 2842 3.612860 CCTAAACACTGCTAGCTACAACG 59.387 47.826 17.23 1.15 0.00 4.10
2491 2844 0.603569 ACACTGCTAGCTACAACGCT 59.396 50.000 17.23 0.00 43.83 5.07
2493 2846 1.656095 CACTGCTAGCTACAACGCTTC 59.344 52.381 17.23 0.00 41.30 3.86
2494 2847 1.546476 ACTGCTAGCTACAACGCTTCT 59.454 47.619 17.23 0.00 41.30 2.85
2495 2848 2.028930 ACTGCTAGCTACAACGCTTCTT 60.029 45.455 17.23 0.00 41.30 2.52
2496 2849 3.192844 ACTGCTAGCTACAACGCTTCTTA 59.807 43.478 17.23 0.00 41.30 2.10
2497 2850 3.770666 TGCTAGCTACAACGCTTCTTAG 58.229 45.455 17.23 0.00 41.30 2.18
2500 2853 4.626172 GCTAGCTACAACGCTTCTTAGTTT 59.374 41.667 7.70 0.00 41.30 2.66
2502 2855 5.593183 AGCTACAACGCTTCTTAGTTTTC 57.407 39.130 0.00 0.00 36.74 2.29
2503 2856 5.298347 AGCTACAACGCTTCTTAGTTTTCT 58.702 37.500 0.00 0.00 36.74 2.52
2504 2857 6.453092 AGCTACAACGCTTCTTAGTTTTCTA 58.547 36.000 0.00 0.00 36.74 2.10
2506 2859 7.603024 AGCTACAACGCTTCTTAGTTTTCTAAT 59.397 33.333 0.00 0.00 38.11 1.73
2507 2860 8.228464 GCTACAACGCTTCTTAGTTTTCTAATT 58.772 33.333 0.00 0.00 40.95 1.40
2629 2985 7.826252 AGCTACTGAAATCATCTGCTTTTCTAA 59.174 33.333 0.00 0.00 32.02 2.10
2995 3465 7.547370 CCGGATATTTTAGCTTGATCTCTAAGG 59.453 40.741 0.00 0.00 0.00 2.69
3068 5189 5.195001 TCAATACAGAAGGGTTTTTGCAC 57.805 39.130 0.00 0.00 0.00 4.57
3075 5201 0.891904 AGGGTTTTTGCACGGCGTAT 60.892 50.000 14.22 0.00 0.00 3.06
3086 5212 3.685272 TGCACGGCGTATAGAAAATTCAA 59.315 39.130 14.22 0.00 0.00 2.69
3151 5281 6.205784 CGTATAAAATTTCATGGCCGAATGT 58.794 36.000 0.00 0.00 0.00 2.71
3152 5282 7.356540 CGTATAAAATTTCATGGCCGAATGTA 58.643 34.615 0.00 0.00 0.00 2.29
3153 5283 8.020819 CGTATAAAATTTCATGGCCGAATGTAT 58.979 33.333 0.00 1.60 0.00 2.29
3295 5647 6.073003 ACTGTAGTCATGCTTTGCTTAGTTTC 60.073 38.462 0.00 0.00 0.00 2.78
3605 6024 3.470709 TGAAACTTCAGGTTCAGCTCTG 58.529 45.455 3.01 0.00 37.12 3.35
3982 6495 8.627208 AACTTGTCTGATGTTCTTATGTTCAT 57.373 30.769 0.00 0.00 0.00 2.57
4158 6680 5.047802 ACAAGAGGTTAACTGCCATTTGATG 60.048 40.000 5.42 0.00 0.00 3.07
4184 6706 1.912731 TCCTTTCGATCCAATGGACCA 59.087 47.619 3.09 0.00 32.98 4.02
4244 6766 5.679382 GCTGCATGGACATTTGCACTTAATA 60.679 40.000 0.00 0.00 43.54 0.98
4249 6771 7.492020 GCATGGACATTTGCACTTAATATGAAA 59.508 33.333 0.00 0.00 38.72 2.69
4486 7031 3.513680 TGAGAATTCATTGTGCATGCC 57.486 42.857 16.68 7.25 32.13 4.40
4671 7230 6.897663 GTCGTTTTATTTTGAGGTTTTGTTGC 59.102 34.615 0.00 0.00 0.00 4.17
4698 7257 4.552883 TTAGTCAGATGGAGGTATGGGA 57.447 45.455 0.00 0.00 0.00 4.37
4701 7260 0.319728 CAGATGGAGGTATGGGAGCG 59.680 60.000 0.00 0.00 0.00 5.03
4738 7297 3.754323 TGACATTTCCCCACGTTCATAAC 59.246 43.478 0.00 0.00 0.00 1.89
4755 7314 4.945543 TCATAACTCACGAACCTAGCTACA 59.054 41.667 0.00 0.00 0.00 2.74
4780 7339 5.840940 AGCATCACTTTACAAGTTACGAC 57.159 39.130 0.00 0.00 40.46 4.34
4787 7346 5.619607 CACTTTACAAGTTACGACAACATGC 59.380 40.000 8.89 0.00 40.46 4.06
4793 7352 3.609853 AGTTACGACAACATGCCATGAT 58.390 40.909 12.53 0.00 0.00 2.45
4795 7354 4.458989 AGTTACGACAACATGCCATGATTT 59.541 37.500 12.53 0.00 0.00 2.17
4796 7355 3.940209 ACGACAACATGCCATGATTTT 57.060 38.095 12.53 0.00 0.00 1.82
4797 7356 6.150307 AGTTACGACAACATGCCATGATTTTA 59.850 34.615 12.53 0.00 0.00 1.52
4798 7357 5.384063 ACGACAACATGCCATGATTTTAA 57.616 34.783 12.53 0.00 0.00 1.52
4799 7358 5.401550 ACGACAACATGCCATGATTTTAAG 58.598 37.500 12.53 0.00 0.00 1.85
4800 7359 5.048083 ACGACAACATGCCATGATTTTAAGT 60.048 36.000 12.53 0.00 0.00 2.24
4801 7360 6.150307 ACGACAACATGCCATGATTTTAAGTA 59.850 34.615 12.53 0.00 0.00 2.24
4802 7361 7.148086 ACGACAACATGCCATGATTTTAAGTAT 60.148 33.333 12.53 0.00 0.00 2.12
4803 7362 7.376866 CGACAACATGCCATGATTTTAAGTATC 59.623 37.037 12.53 0.00 0.00 2.24
4804 7363 7.195646 ACAACATGCCATGATTTTAAGTATCG 58.804 34.615 12.53 0.00 0.00 2.92
4805 7364 7.066887 ACAACATGCCATGATTTTAAGTATCGA 59.933 33.333 12.53 0.00 0.00 3.59
4830 7389 6.985645 ACTAACATTGTAAGGTACACACGAAA 59.014 34.615 0.00 0.00 38.63 3.46
4838 7397 7.629130 TGTAAGGTACACACGAAATTTACAAC 58.371 34.615 0.00 0.00 32.89 3.32
4859 7418 2.877786 CCCCTTTGACAAAAACAATGGC 59.122 45.455 1.62 0.00 39.57 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 4.213482 CCGTTTCGATCTTCTCCAGTTTTT 59.787 41.667 0.00 0.00 0.00 1.94
76 77 3.746492 CCGTTTCGATCTTCTCCAGTTTT 59.254 43.478 0.00 0.00 0.00 2.43
77 78 3.006537 TCCGTTTCGATCTTCTCCAGTTT 59.993 43.478 0.00 0.00 0.00 2.66
78 79 2.561419 TCCGTTTCGATCTTCTCCAGTT 59.439 45.455 0.00 0.00 0.00 3.16
79 80 2.168496 TCCGTTTCGATCTTCTCCAGT 58.832 47.619 0.00 0.00 0.00 4.00
80 81 2.941453 TCCGTTTCGATCTTCTCCAG 57.059 50.000 0.00 0.00 0.00 3.86
81 82 3.671008 TTTCCGTTTCGATCTTCTCCA 57.329 42.857 0.00 0.00 0.00 3.86
82 83 4.378149 GGTTTTTCCGTTTCGATCTTCTCC 60.378 45.833 0.00 0.00 0.00 3.71
83 84 4.212636 TGGTTTTTCCGTTTCGATCTTCTC 59.787 41.667 0.00 0.00 39.52 2.87
84 85 4.024302 GTGGTTTTTCCGTTTCGATCTTCT 60.024 41.667 0.00 0.00 39.52 2.85
85 86 4.216731 GTGGTTTTTCCGTTTCGATCTTC 58.783 43.478 0.00 0.00 39.52 2.87
86 87 3.628487 TGTGGTTTTTCCGTTTCGATCTT 59.372 39.130 0.00 0.00 39.52 2.40
87 88 3.207778 TGTGGTTTTTCCGTTTCGATCT 58.792 40.909 0.00 0.00 39.52 2.75
88 89 3.612472 TGTGGTTTTTCCGTTTCGATC 57.388 42.857 0.00 0.00 39.52 3.69
89 90 3.628487 TCTTGTGGTTTTTCCGTTTCGAT 59.372 39.130 0.00 0.00 39.52 3.59
90 91 3.008330 TCTTGTGGTTTTTCCGTTTCGA 58.992 40.909 0.00 0.00 39.52 3.71
91 92 3.408288 TCTTGTGGTTTTTCCGTTTCG 57.592 42.857 0.00 0.00 39.52 3.46
92 93 6.469139 TTTTTCTTGTGGTTTTTCCGTTTC 57.531 33.333 0.00 0.00 39.52 2.78
112 113 5.427036 TCTTATTTTCGCAGACCGTTTTT 57.573 34.783 0.00 0.00 34.32 1.94
113 114 5.427036 TTCTTATTTTCGCAGACCGTTTT 57.573 34.783 0.00 0.00 34.32 2.43
114 115 5.048991 ACATTCTTATTTTCGCAGACCGTTT 60.049 36.000 0.00 0.00 34.32 3.60
115 116 4.454504 ACATTCTTATTTTCGCAGACCGTT 59.545 37.500 0.00 0.00 34.32 4.44
116 117 4.000988 ACATTCTTATTTTCGCAGACCGT 58.999 39.130 0.00 0.00 34.32 4.83
117 118 4.334443 CACATTCTTATTTTCGCAGACCG 58.666 43.478 0.00 0.00 34.32 4.79
118 119 4.098416 GCACATTCTTATTTTCGCAGACC 58.902 43.478 0.00 0.00 34.32 3.85
119 120 4.722194 TGCACATTCTTATTTTCGCAGAC 58.278 39.130 0.00 0.00 34.32 3.51
120 121 5.565592 ATGCACATTCTTATTTTCGCAGA 57.434 34.783 0.00 0.00 0.00 4.26
121 122 6.195244 GTGTATGCACATTCTTATTTTCGCAG 59.805 38.462 9.26 0.00 44.64 5.18
122 123 6.027131 GTGTATGCACATTCTTATTTTCGCA 58.973 36.000 9.26 0.00 44.64 5.10
123 124 5.169561 CGTGTATGCACATTCTTATTTTCGC 59.830 40.000 14.55 0.00 45.50 4.70
124 125 6.192682 CACGTGTATGCACATTCTTATTTTCG 59.807 38.462 14.55 0.00 45.50 3.46
125 126 6.468956 CCACGTGTATGCACATTCTTATTTTC 59.531 38.462 15.65 0.00 45.50 2.29
126 127 6.321717 CCACGTGTATGCACATTCTTATTTT 58.678 36.000 15.65 0.00 45.50 1.82
127 128 5.676079 GCCACGTGTATGCACATTCTTATTT 60.676 40.000 15.65 0.00 45.50 1.40
128 129 4.201910 GCCACGTGTATGCACATTCTTATT 60.202 41.667 15.65 0.00 45.50 1.40
129 130 3.312421 GCCACGTGTATGCACATTCTTAT 59.688 43.478 15.65 0.00 45.50 1.73
130 131 2.675844 GCCACGTGTATGCACATTCTTA 59.324 45.455 15.65 0.00 45.50 2.10
131 132 1.468520 GCCACGTGTATGCACATTCTT 59.531 47.619 15.65 0.00 45.50 2.52
132 133 1.086696 GCCACGTGTATGCACATTCT 58.913 50.000 15.65 0.00 45.50 2.40
133 134 0.801872 TGCCACGTGTATGCACATTC 59.198 50.000 15.65 0.80 45.50 2.67
134 135 0.804364 CTGCCACGTGTATGCACATT 59.196 50.000 15.65 0.00 45.50 2.71
135 136 0.036483 TCTGCCACGTGTATGCACAT 60.036 50.000 15.65 0.00 45.50 3.21
136 137 0.036483 ATCTGCCACGTGTATGCACA 60.036 50.000 15.65 5.25 45.50 4.57
137 138 0.374758 CATCTGCCACGTGTATGCAC 59.625 55.000 15.65 3.51 41.97 4.57
138 139 0.036483 ACATCTGCCACGTGTATGCA 60.036 50.000 15.65 15.63 0.00 3.96
139 140 0.374758 CACATCTGCCACGTGTATGC 59.625 55.000 15.65 11.53 0.00 3.14
140 141 0.374758 GCACATCTGCCACGTGTATG 59.625 55.000 15.65 13.96 37.45 2.39
141 142 1.083806 CGCACATCTGCCACGTGTAT 61.084 55.000 15.65 0.00 40.73 2.29
142 143 1.736282 CGCACATCTGCCACGTGTA 60.736 57.895 15.65 1.96 40.73 2.90
143 144 3.043713 CGCACATCTGCCACGTGT 61.044 61.111 15.65 0.00 40.73 4.49
144 145 3.043713 ACGCACATCTGCCACGTG 61.044 61.111 9.08 9.08 40.73 4.49
145 146 3.043713 CACGCACATCTGCCACGT 61.044 61.111 0.00 0.00 40.73 4.49
146 147 3.043713 ACACGCACATCTGCCACG 61.044 61.111 0.00 0.00 40.73 4.94
147 148 2.557805 CACACGCACATCTGCCAC 59.442 61.111 0.00 0.00 40.73 5.01
148 149 3.356267 GCACACGCACATCTGCCA 61.356 61.111 0.00 0.00 40.73 4.92
149 150 4.450122 CGCACACGCACATCTGCC 62.450 66.667 0.00 0.00 40.73 4.85
159 160 1.446792 AGGATTCAGAGCGCACACG 60.447 57.895 11.47 0.00 44.07 4.49
160 161 1.364626 CCAGGATTCAGAGCGCACAC 61.365 60.000 11.47 0.00 0.00 3.82
161 162 1.078918 CCAGGATTCAGAGCGCACA 60.079 57.895 11.47 0.00 0.00 4.57
162 163 1.817099 CCCAGGATTCAGAGCGCAC 60.817 63.158 11.47 2.25 0.00 5.34
163 164 2.586245 CCCAGGATTCAGAGCGCA 59.414 61.111 11.47 0.00 0.00 6.09
164 165 2.049627 ATCCCCAGGATTCAGAGCGC 62.050 60.000 0.00 0.00 39.79 5.92
165 166 1.342074 TATCCCCAGGATTCAGAGCG 58.658 55.000 0.60 0.00 39.79 5.03
166 167 2.617532 GCATATCCCCAGGATTCAGAGC 60.618 54.545 0.60 0.00 39.79 4.09
167 168 2.641321 TGCATATCCCCAGGATTCAGAG 59.359 50.000 0.60 0.00 39.79 3.35
168 169 2.705148 TGCATATCCCCAGGATTCAGA 58.295 47.619 0.60 0.00 39.79 3.27
169 170 3.353557 CATGCATATCCCCAGGATTCAG 58.646 50.000 0.00 0.00 39.79 3.02
170 171 2.042026 CCATGCATATCCCCAGGATTCA 59.958 50.000 0.00 0.00 39.79 2.57
171 172 2.042162 ACCATGCATATCCCCAGGATTC 59.958 50.000 0.00 0.00 39.79 2.52
172 173 2.076189 ACCATGCATATCCCCAGGATT 58.924 47.619 0.00 0.00 39.79 3.01
173 174 1.356738 CACCATGCATATCCCCAGGAT 59.643 52.381 0.00 1.08 45.40 3.24
174 175 0.773014 CACCATGCATATCCCCAGGA 59.227 55.000 0.00 0.00 35.55 3.86
175 176 0.896940 GCACCATGCATATCCCCAGG 60.897 60.000 0.00 0.00 44.26 4.45
176 177 2.649831 GCACCATGCATATCCCCAG 58.350 57.895 0.00 0.00 44.26 4.45
177 178 4.927557 GCACCATGCATATCCCCA 57.072 55.556 0.00 0.00 44.26 4.96
192 193 5.600898 TGCTATATACTAGTTGGTGGAAGCA 59.399 40.000 0.00 5.35 46.28 3.91
193 194 5.927115 GTGCTATATACTAGTTGGTGGAAGC 59.073 44.000 0.00 2.74 0.00 3.86
194 195 7.050970 TGTGCTATATACTAGTTGGTGGAAG 57.949 40.000 0.00 0.00 0.00 3.46
195 196 7.426606 TTGTGCTATATACTAGTTGGTGGAA 57.573 36.000 0.00 0.00 0.00 3.53
196 197 7.509318 AGATTGTGCTATATACTAGTTGGTGGA 59.491 37.037 0.00 0.00 0.00 4.02
197 198 7.671302 AGATTGTGCTATATACTAGTTGGTGG 58.329 38.462 0.00 0.00 0.00 4.61
198 199 8.360390 TGAGATTGTGCTATATACTAGTTGGTG 58.640 37.037 0.00 0.00 0.00 4.17
199 200 8.478775 TGAGATTGTGCTATATACTAGTTGGT 57.521 34.615 0.00 0.00 0.00 3.67
200 201 9.579768 GATGAGATTGTGCTATATACTAGTTGG 57.420 37.037 0.00 0.00 0.00 3.77
206 207 9.872721 CTGATTGATGAGATTGTGCTATATACT 57.127 33.333 0.00 0.00 0.00 2.12
207 208 8.602328 GCTGATTGATGAGATTGTGCTATATAC 58.398 37.037 0.00 0.00 0.00 1.47
208 209 8.537858 AGCTGATTGATGAGATTGTGCTATATA 58.462 33.333 0.00 0.00 0.00 0.86
209 210 7.395617 AGCTGATTGATGAGATTGTGCTATAT 58.604 34.615 0.00 0.00 0.00 0.86
210 211 6.766429 AGCTGATTGATGAGATTGTGCTATA 58.234 36.000 0.00 0.00 0.00 1.31
211 212 5.622180 AGCTGATTGATGAGATTGTGCTAT 58.378 37.500 0.00 0.00 0.00 2.97
212 213 5.032327 AGCTGATTGATGAGATTGTGCTA 57.968 39.130 0.00 0.00 0.00 3.49
213 214 3.878103 GAGCTGATTGATGAGATTGTGCT 59.122 43.478 0.00 0.00 0.00 4.40
214 215 3.003482 GGAGCTGATTGATGAGATTGTGC 59.997 47.826 0.00 0.00 0.00 4.57
215 216 4.452825 AGGAGCTGATTGATGAGATTGTG 58.547 43.478 0.00 0.00 0.00 3.33
216 217 4.774660 AGGAGCTGATTGATGAGATTGT 57.225 40.909 0.00 0.00 0.00 2.71
217 218 4.882427 ACAAGGAGCTGATTGATGAGATTG 59.118 41.667 13.11 0.00 0.00 2.67
218 219 5.113446 ACAAGGAGCTGATTGATGAGATT 57.887 39.130 13.11 0.00 0.00 2.40
219 220 4.774660 ACAAGGAGCTGATTGATGAGAT 57.225 40.909 13.11 0.00 0.00 2.75
220 221 4.224594 AGAACAAGGAGCTGATTGATGAGA 59.775 41.667 13.11 0.00 0.00 3.27
221 222 4.515361 AGAACAAGGAGCTGATTGATGAG 58.485 43.478 13.11 0.00 0.00 2.90
222 223 4.564782 AGAACAAGGAGCTGATTGATGA 57.435 40.909 13.11 0.00 0.00 2.92
223 224 4.458295 ACAAGAACAAGGAGCTGATTGATG 59.542 41.667 13.11 8.98 0.00 3.07
224 225 4.660168 ACAAGAACAAGGAGCTGATTGAT 58.340 39.130 13.11 2.77 0.00 2.57
225 226 4.067896 GACAAGAACAAGGAGCTGATTGA 58.932 43.478 13.11 0.00 0.00 2.57
226 227 3.190118 GGACAAGAACAAGGAGCTGATTG 59.810 47.826 0.00 0.00 0.00 2.67
227 228 3.181440 TGGACAAGAACAAGGAGCTGATT 60.181 43.478 0.00 0.00 0.00 2.57
228 229 2.373169 TGGACAAGAACAAGGAGCTGAT 59.627 45.455 0.00 0.00 0.00 2.90
229 230 1.768275 TGGACAAGAACAAGGAGCTGA 59.232 47.619 0.00 0.00 0.00 4.26
230 231 2.149578 CTGGACAAGAACAAGGAGCTG 58.850 52.381 0.00 0.00 0.00 4.24
231 232 1.771255 ACTGGACAAGAACAAGGAGCT 59.229 47.619 0.00 0.00 0.00 4.09
232 233 2.262423 ACTGGACAAGAACAAGGAGC 57.738 50.000 0.00 0.00 0.00 4.70
233 234 4.214332 GCTTAACTGGACAAGAACAAGGAG 59.786 45.833 0.00 0.00 0.00 3.69
234 235 4.134563 GCTTAACTGGACAAGAACAAGGA 58.865 43.478 0.00 0.00 0.00 3.36
235 236 3.253432 GGCTTAACTGGACAAGAACAAGG 59.747 47.826 0.00 0.00 0.00 3.61
236 237 4.137543 AGGCTTAACTGGACAAGAACAAG 58.862 43.478 0.00 0.00 0.00 3.16
237 238 4.164843 AGGCTTAACTGGACAAGAACAA 57.835 40.909 0.00 0.00 0.00 2.83
238 239 3.857157 AGGCTTAACTGGACAAGAACA 57.143 42.857 0.00 0.00 0.00 3.18
239 240 4.822350 AGAAAGGCTTAACTGGACAAGAAC 59.178 41.667 0.00 0.00 0.00 3.01
240 241 5.048846 AGAAAGGCTTAACTGGACAAGAA 57.951 39.130 0.00 0.00 0.00 2.52
241 242 4.102524 TGAGAAAGGCTTAACTGGACAAGA 59.897 41.667 0.00 0.00 0.00 3.02
242 243 4.389374 TGAGAAAGGCTTAACTGGACAAG 58.611 43.478 0.00 0.00 0.00 3.16
243 244 4.431416 TGAGAAAGGCTTAACTGGACAA 57.569 40.909 0.00 0.00 0.00 3.18
244 245 4.326826 CATGAGAAAGGCTTAACTGGACA 58.673 43.478 0.00 0.00 0.00 4.02
245 246 3.691609 CCATGAGAAAGGCTTAACTGGAC 59.308 47.826 0.00 0.00 0.00 4.02
246 247 3.955471 CCATGAGAAAGGCTTAACTGGA 58.045 45.455 0.00 0.00 0.00 3.86
256 257 1.271543 TGGACAGTGCCATGAGAAAGG 60.272 52.381 0.00 0.00 31.66 3.11
257 258 1.808945 GTGGACAGTGCCATGAGAAAG 59.191 52.381 9.13 0.00 40.68 2.62
258 259 1.545428 GGTGGACAGTGCCATGAGAAA 60.545 52.381 9.13 0.00 40.68 2.52
259 260 0.036732 GGTGGACAGTGCCATGAGAA 59.963 55.000 9.13 0.00 40.68 2.87
260 261 1.126948 TGGTGGACAGTGCCATGAGA 61.127 55.000 9.13 0.00 40.68 3.27
261 262 0.250858 TTGGTGGACAGTGCCATGAG 60.251 55.000 9.13 0.00 40.68 2.90
262 263 0.405198 ATTGGTGGACAGTGCCATGA 59.595 50.000 9.13 1.00 40.68 3.07
263 264 0.528924 CATTGGTGGACAGTGCCATG 59.471 55.000 9.13 1.36 40.68 3.66
264 265 2.965805 CATTGGTGGACAGTGCCAT 58.034 52.632 9.13 0.00 40.68 4.40
265 266 4.498346 CATTGGTGGACAGTGCCA 57.502 55.556 2.57 2.57 35.02 4.92
268 269 0.528924 CATGGCATTGGTGGACAGTG 59.471 55.000 0.00 0.00 39.59 3.66
269 270 0.405198 TCATGGCATTGGTGGACAGT 59.595 50.000 0.00 0.00 0.00 3.55
270 271 0.813184 GTCATGGCATTGGTGGACAG 59.187 55.000 0.00 0.00 0.00 3.51
271 272 0.611618 GGTCATGGCATTGGTGGACA 60.612 55.000 14.48 0.00 0.00 4.02
272 273 0.323725 AGGTCATGGCATTGGTGGAC 60.324 55.000 0.00 1.42 0.00 4.02
273 274 1.294041 TAGGTCATGGCATTGGTGGA 58.706 50.000 0.00 0.00 0.00 4.02
274 275 2.026641 CTTAGGTCATGGCATTGGTGG 58.973 52.381 0.00 0.00 0.00 4.61
275 276 2.026641 CCTTAGGTCATGGCATTGGTG 58.973 52.381 0.00 0.00 0.00 4.17
276 277 1.922447 TCCTTAGGTCATGGCATTGGT 59.078 47.619 0.00 0.00 0.00 3.67
277 278 2.689983 GTTCCTTAGGTCATGGCATTGG 59.310 50.000 0.00 0.00 0.00 3.16
278 279 3.355378 TGTTCCTTAGGTCATGGCATTG 58.645 45.455 0.00 0.00 0.00 2.82
279 280 3.737559 TGTTCCTTAGGTCATGGCATT 57.262 42.857 0.00 0.00 0.00 3.56
280 281 3.010584 ACTTGTTCCTTAGGTCATGGCAT 59.989 43.478 0.00 0.00 0.00 4.40
281 282 2.375174 ACTTGTTCCTTAGGTCATGGCA 59.625 45.455 0.00 0.00 0.00 4.92
282 283 3.010420 GACTTGTTCCTTAGGTCATGGC 58.990 50.000 0.00 0.00 0.00 4.40
283 284 4.286297 TGACTTGTTCCTTAGGTCATGG 57.714 45.455 0.00 0.00 32.91 3.66
285 286 5.248640 CACATGACTTGTTCCTTAGGTCAT 58.751 41.667 0.00 0.00 44.95 3.06
286 287 4.504864 CCACATGACTTGTTCCTTAGGTCA 60.505 45.833 0.00 0.00 40.43 4.02
287 288 4.003648 CCACATGACTTGTTCCTTAGGTC 58.996 47.826 0.00 0.00 36.00 3.85
288 289 3.810743 GCCACATGACTTGTTCCTTAGGT 60.811 47.826 0.00 0.00 36.00 3.08
289 290 2.749621 GCCACATGACTTGTTCCTTAGG 59.250 50.000 0.00 0.00 36.00 2.69
290 291 3.679389 AGCCACATGACTTGTTCCTTAG 58.321 45.455 0.00 0.00 36.00 2.18
291 292 3.072330 TGAGCCACATGACTTGTTCCTTA 59.928 43.478 0.00 0.00 36.00 2.69
292 293 2.158623 TGAGCCACATGACTTGTTCCTT 60.159 45.455 0.00 0.00 36.00 3.36
293 294 1.421268 TGAGCCACATGACTTGTTCCT 59.579 47.619 0.00 0.00 36.00 3.36
294 295 1.808945 CTGAGCCACATGACTTGTTCC 59.191 52.381 0.00 0.00 36.00 3.62
295 296 1.198637 GCTGAGCCACATGACTTGTTC 59.801 52.381 0.00 0.00 36.00 3.18
296 297 1.202855 AGCTGAGCCACATGACTTGTT 60.203 47.619 0.00 0.00 36.00 2.83
297 298 0.399454 AGCTGAGCCACATGACTTGT 59.601 50.000 0.00 0.00 39.91 3.16
298 299 1.085091 GAGCTGAGCCACATGACTTG 58.915 55.000 0.00 0.00 0.00 3.16
299 300 0.035630 GGAGCTGAGCCACATGACTT 60.036 55.000 0.00 0.00 0.00 3.01
300 301 0.908656 AGGAGCTGAGCCACATGACT 60.909 55.000 0.00 0.00 0.00 3.41
301 302 0.461693 GAGGAGCTGAGCCACATGAC 60.462 60.000 0.00 0.00 0.00 3.06
302 303 0.906282 TGAGGAGCTGAGCCACATGA 60.906 55.000 0.00 0.00 0.00 3.07
303 304 0.035725 TTGAGGAGCTGAGCCACATG 60.036 55.000 0.00 0.00 0.00 3.21
304 305 0.694771 TTTGAGGAGCTGAGCCACAT 59.305 50.000 0.00 0.00 0.00 3.21
305 306 0.250467 GTTTGAGGAGCTGAGCCACA 60.250 55.000 0.00 0.00 0.00 4.17
306 307 0.036022 AGTTTGAGGAGCTGAGCCAC 59.964 55.000 0.00 0.00 0.00 5.01
307 308 0.322975 GAGTTTGAGGAGCTGAGCCA 59.677 55.000 0.00 0.00 0.00 4.75
308 309 0.739112 CGAGTTTGAGGAGCTGAGCC 60.739 60.000 0.00 0.00 0.00 4.70
309 310 0.739112 CCGAGTTTGAGGAGCTGAGC 60.739 60.000 0.00 0.00 0.00 4.26
310 311 0.739112 GCCGAGTTTGAGGAGCTGAG 60.739 60.000 0.00 0.00 0.00 3.35
311 312 1.293498 GCCGAGTTTGAGGAGCTGA 59.707 57.895 0.00 0.00 0.00 4.26
312 313 1.743252 GGCCGAGTTTGAGGAGCTG 60.743 63.158 0.00 0.00 0.00 4.24
313 314 2.665603 GGCCGAGTTTGAGGAGCT 59.334 61.111 0.00 0.00 0.00 4.09
314 315 2.436824 GGGCCGAGTTTGAGGAGC 60.437 66.667 0.00 0.00 0.00 4.70
315 316 0.674895 CAAGGGCCGAGTTTGAGGAG 60.675 60.000 0.00 0.00 0.00 3.69
316 317 1.125093 TCAAGGGCCGAGTTTGAGGA 61.125 55.000 0.00 0.00 0.00 3.71
317 318 0.955919 GTCAAGGGCCGAGTTTGAGG 60.956 60.000 6.21 0.00 32.00 3.86
318 319 1.291877 CGTCAAGGGCCGAGTTTGAG 61.292 60.000 6.21 0.00 32.00 3.02
319 320 1.301401 CGTCAAGGGCCGAGTTTGA 60.301 57.895 0.00 0.00 0.00 2.69
320 321 1.164041 AACGTCAAGGGCCGAGTTTG 61.164 55.000 0.00 0.00 0.00 2.93
321 322 0.883370 GAACGTCAAGGGCCGAGTTT 60.883 55.000 0.00 0.00 0.00 2.66
322 323 1.301479 GAACGTCAAGGGCCGAGTT 60.301 57.895 0.00 1.12 0.00 3.01
323 324 2.342648 GAACGTCAAGGGCCGAGT 59.657 61.111 0.00 0.00 0.00 4.18
324 325 2.434359 GGAACGTCAAGGGCCGAG 60.434 66.667 0.00 0.00 0.00 4.63
325 326 4.011517 GGGAACGTCAAGGGCCGA 62.012 66.667 0.00 0.00 0.00 5.54
326 327 3.835790 TTGGGAACGTCAAGGGCCG 62.836 63.158 0.00 0.00 0.00 6.13
327 328 1.971695 CTTGGGAACGTCAAGGGCC 60.972 63.158 7.43 0.00 38.26 5.80
328 329 1.228154 ACTTGGGAACGTCAAGGGC 60.228 57.895 16.94 0.00 44.13 5.19
329 330 0.605589 GGACTTGGGAACGTCAAGGG 60.606 60.000 16.94 0.00 44.13 3.95
330 331 0.949105 CGGACTTGGGAACGTCAAGG 60.949 60.000 16.94 3.11 44.13 3.61
331 332 0.249741 ACGGACTTGGGAACGTCAAG 60.250 55.000 12.50 12.50 45.03 3.02
332 333 0.531090 CACGGACTTGGGAACGTCAA 60.531 55.000 0.00 0.00 37.48 3.18
333 334 1.068417 CACGGACTTGGGAACGTCA 59.932 57.895 0.00 0.00 37.48 4.35
334 335 2.315386 GCACGGACTTGGGAACGTC 61.315 63.158 0.00 0.00 37.48 4.34
335 336 2.280592 GCACGGACTTGGGAACGT 60.281 61.111 0.00 0.00 40.60 3.99
336 337 3.047877 GGCACGGACTTGGGAACG 61.048 66.667 0.00 0.00 0.00 3.95
337 338 1.833787 TAGGGCACGGACTTGGGAAC 61.834 60.000 0.00 0.00 0.00 3.62
338 339 1.536907 TAGGGCACGGACTTGGGAA 60.537 57.895 0.00 0.00 0.00 3.97
339 340 1.987855 CTAGGGCACGGACTTGGGA 60.988 63.158 0.00 0.00 0.00 4.37
340 341 1.961180 CTCTAGGGCACGGACTTGGG 61.961 65.000 0.00 0.00 0.00 4.12
341 342 1.258445 ACTCTAGGGCACGGACTTGG 61.258 60.000 0.00 0.00 0.00 3.61
342 343 1.471119 TACTCTAGGGCACGGACTTG 58.529 55.000 0.00 0.00 0.00 3.16
343 344 2.226962 TTACTCTAGGGCACGGACTT 57.773 50.000 0.00 0.00 0.00 3.01
344 345 2.456073 ATTACTCTAGGGCACGGACT 57.544 50.000 0.00 0.00 0.00 3.85
345 346 4.868314 ATAATTACTCTAGGGCACGGAC 57.132 45.455 0.00 0.00 0.00 4.79
346 347 5.479375 CCTAATAATTACTCTAGGGCACGGA 59.521 44.000 0.00 0.00 0.00 4.69
347 348 5.337330 CCCTAATAATTACTCTAGGGCACGG 60.337 48.000 17.31 1.95 43.17 4.94
348 349 5.721232 CCCTAATAATTACTCTAGGGCACG 58.279 45.833 17.31 0.00 43.17 5.34
366 367 5.071384 GGCTAACTAATCAACCTAGCCCTAA 59.929 44.000 7.10 0.00 45.95 2.69
369 370 3.741249 GGCTAACTAATCAACCTAGCCC 58.259 50.000 7.10 0.00 45.95 5.19
371 372 5.880887 ACTTTGGCTAACTAATCAACCTAGC 59.119 40.000 0.00 0.00 35.34 3.42
372 373 6.539103 GGACTTTGGCTAACTAATCAACCTAG 59.461 42.308 0.00 0.00 0.00 3.02
389 394 1.204941 CGTACAGAGGGAGGACTTTGG 59.795 57.143 0.00 0.00 0.00 3.28
426 431 9.650539 CTATAGCAAACTCCTAGTATACGACTA 57.349 37.037 0.00 0.00 39.81 2.59
427 432 8.156165 ACTATAGCAAACTCCTAGTATACGACT 58.844 37.037 0.00 0.00 42.69 4.18
428 433 8.321650 ACTATAGCAAACTCCTAGTATACGAC 57.678 38.462 0.00 0.00 0.00 4.34
429 434 8.781196 CAACTATAGCAAACTCCTAGTATACGA 58.219 37.037 0.00 0.00 29.10 3.43
430 435 8.566260 ACAACTATAGCAAACTCCTAGTATACG 58.434 37.037 0.00 0.00 29.10 3.06
431 436 9.896263 GACAACTATAGCAAACTCCTAGTATAC 57.104 37.037 0.00 0.00 29.10 1.47
432 437 9.863650 AGACAACTATAGCAAACTCCTAGTATA 57.136 33.333 0.00 0.00 29.10 1.47
433 438 8.634444 CAGACAACTATAGCAAACTCCTAGTAT 58.366 37.037 0.00 0.00 29.10 2.12
434 439 7.614583 ACAGACAACTATAGCAAACTCCTAGTA 59.385 37.037 0.00 0.00 29.10 1.82
435 440 6.437793 ACAGACAACTATAGCAAACTCCTAGT 59.562 38.462 0.00 0.00 0.00 2.57
436 441 6.868622 ACAGACAACTATAGCAAACTCCTAG 58.131 40.000 0.00 0.00 0.00 3.02
437 442 6.852420 ACAGACAACTATAGCAAACTCCTA 57.148 37.500 0.00 0.00 0.00 2.94
438 443 5.746990 ACAGACAACTATAGCAAACTCCT 57.253 39.130 0.00 0.00 0.00 3.69
449 454 6.956202 AGTATACCGCTAACAGACAACTAT 57.044 37.500 0.00 0.00 0.00 2.12
477 482 1.821136 AGAGGAACCTAACCGTAACCG 59.179 52.381 0.00 0.00 0.00 4.44
478 483 2.167281 GGAGAGGAACCTAACCGTAACC 59.833 54.545 0.00 0.00 0.00 2.85
479 484 2.159324 CGGAGAGGAACCTAACCGTAAC 60.159 54.545 20.95 0.00 38.77 2.50
480 485 2.094675 CGGAGAGGAACCTAACCGTAA 58.905 52.381 20.95 0.00 38.77 3.18
481 486 1.755179 CGGAGAGGAACCTAACCGTA 58.245 55.000 20.95 0.00 38.77 4.02
482 487 1.602327 GCGGAGAGGAACCTAACCGT 61.602 60.000 25.70 1.31 42.38 4.83
483 488 1.141234 GCGGAGAGGAACCTAACCG 59.859 63.158 23.20 23.20 42.86 4.44
484 489 0.976590 AGGCGGAGAGGAACCTAACC 60.977 60.000 0.00 0.02 0.00 2.85
485 490 0.175989 CAGGCGGAGAGGAACCTAAC 59.824 60.000 0.00 0.00 0.00 2.34
486 491 0.976073 CCAGGCGGAGAGGAACCTAA 60.976 60.000 0.00 0.00 0.00 2.69
487 492 1.381327 CCAGGCGGAGAGGAACCTA 60.381 63.158 0.00 0.00 0.00 3.08
488 493 2.685380 CCAGGCGGAGAGGAACCT 60.685 66.667 0.00 0.00 0.00 3.50
489 494 4.475135 GCCAGGCGGAGAGGAACC 62.475 72.222 0.00 0.00 0.00 3.62
490 495 1.403687 ATAGCCAGGCGGAGAGGAAC 61.404 60.000 5.55 0.00 0.00 3.62
491 496 0.187606 TATAGCCAGGCGGAGAGGAA 59.812 55.000 5.55 0.00 0.00 3.36
492 497 0.409876 ATATAGCCAGGCGGAGAGGA 59.590 55.000 5.55 0.00 0.00 3.71
493 498 2.145397 TATATAGCCAGGCGGAGAGG 57.855 55.000 5.55 0.00 0.00 3.69
494 499 4.465886 AGTATATATAGCCAGGCGGAGAG 58.534 47.826 5.55 0.00 0.00 3.20
495 500 4.521536 AGTATATATAGCCAGGCGGAGA 57.478 45.455 5.55 0.00 0.00 3.71
496 501 5.770663 ACATAGTATATATAGCCAGGCGGAG 59.229 44.000 5.55 0.00 0.00 4.63
497 502 5.702266 ACATAGTATATATAGCCAGGCGGA 58.298 41.667 5.55 0.00 0.00 5.54
498 503 6.151312 CCTACATAGTATATATAGCCAGGCGG 59.849 46.154 5.55 0.00 0.00 6.13
499 504 6.715718 ACCTACATAGTATATATAGCCAGGCG 59.284 42.308 5.55 0.00 0.00 5.52
500 505 8.480133 AACCTACATAGTATATATAGCCAGGC 57.520 38.462 1.84 1.84 0.00 4.85
501 506 9.080097 GGAACCTACATAGTATATATAGCCAGG 57.920 40.741 0.00 0.00 0.00 4.45
502 507 9.642343 TGGAACCTACATAGTATATATAGCCAG 57.358 37.037 0.00 0.00 0.00 4.85
514 519 9.338622 GTTATGCTTTTATGGAACCTACATAGT 57.661 33.333 0.00 0.00 32.85 2.12
515 520 8.784043 GGTTATGCTTTTATGGAACCTACATAG 58.216 37.037 0.00 0.00 34.72 2.23
516 521 7.722285 GGGTTATGCTTTTATGGAACCTACATA 59.278 37.037 0.00 0.00 37.18 2.29
517 522 6.549736 GGGTTATGCTTTTATGGAACCTACAT 59.450 38.462 0.00 0.00 37.18 2.29
518 523 5.889289 GGGTTATGCTTTTATGGAACCTACA 59.111 40.000 0.00 0.00 37.18 2.74
519 524 5.301045 GGGGTTATGCTTTTATGGAACCTAC 59.699 44.000 0.00 0.00 37.18 3.18
520 525 5.451354 GGGGTTATGCTTTTATGGAACCTA 58.549 41.667 0.00 0.00 37.18 3.08
521 526 4.286707 GGGGTTATGCTTTTATGGAACCT 58.713 43.478 0.00 0.00 37.18 3.50
522 527 3.386726 GGGGGTTATGCTTTTATGGAACC 59.613 47.826 0.00 0.00 36.43 3.62
523 528 4.665833 GGGGGTTATGCTTTTATGGAAC 57.334 45.455 0.00 0.00 0.00 3.62
552 557 1.081840 GTTTGTTGGAGCTGCGAGC 60.082 57.895 0.00 0.47 42.84 5.03
577 582 0.244721 GCACAATGGCTGGTTTCCTC 59.755 55.000 0.00 0.00 0.00 3.71
583 589 1.152483 AGGTTGCACAATGGCTGGT 60.152 52.632 0.00 0.00 34.04 4.00
584 590 1.290955 CAGGTTGCACAATGGCTGG 59.709 57.895 0.00 0.00 34.04 4.85
605 611 1.412079 TTTGGTGCAGCTGGATTTGT 58.588 45.000 17.12 0.00 0.00 2.83
606 612 2.613691 GATTTGGTGCAGCTGGATTTG 58.386 47.619 17.12 0.00 0.00 2.32
607 613 1.551883 GGATTTGGTGCAGCTGGATTT 59.448 47.619 17.12 0.00 0.00 2.17
608 614 1.188863 GGATTTGGTGCAGCTGGATT 58.811 50.000 17.12 0.00 0.00 3.01
609 615 0.040058 TGGATTTGGTGCAGCTGGAT 59.960 50.000 17.12 8.10 0.00 3.41
610 616 0.609957 CTGGATTTGGTGCAGCTGGA 60.610 55.000 17.12 10.66 39.52 3.86
611 617 1.601419 CCTGGATTTGGTGCAGCTGG 61.601 60.000 17.12 4.28 44.23 4.85
612 618 0.896940 ACCTGGATTTGGTGCAGCTG 60.897 55.000 18.08 10.11 44.23 4.24
613 619 0.698238 TACCTGGATTTGGTGCAGCT 59.302 50.000 18.08 0.00 44.23 4.24
614 620 1.767759 ATACCTGGATTTGGTGCAGC 58.232 50.000 9.47 9.47 44.23 5.25
615 621 4.019174 AGAAATACCTGGATTTGGTGCAG 58.981 43.478 0.00 0.00 45.08 4.41
616 622 4.046286 AGAAATACCTGGATTTGGTGCA 57.954 40.909 0.00 0.00 38.42 4.57
617 623 4.706962 AGAAGAAATACCTGGATTTGGTGC 59.293 41.667 0.00 0.00 38.42 5.01
618 624 6.183347 AGAGAAGAAATACCTGGATTTGGTG 58.817 40.000 0.00 0.00 38.42 4.17
619 625 6.216456 AGAGAGAAGAAATACCTGGATTTGGT 59.784 38.462 0.00 0.00 41.28 3.67
678 684 1.876156 CGAAGCAGAAAGCCTGAAAGT 59.124 47.619 0.00 0.00 45.78 2.66
693 699 1.855360 GGATTCAGACGATGACGAAGC 59.145 52.381 0.00 0.00 42.66 3.86
695 701 2.100197 AGGGATTCAGACGATGACGAA 58.900 47.619 0.00 0.00 42.66 3.85
698 704 3.810310 AGAAGGGATTCAGACGATGAC 57.190 47.619 0.00 0.00 37.77 3.06
701 707 6.546428 TTAGAAAGAAGGGATTCAGACGAT 57.454 37.500 0.00 0.00 0.00 3.73
703 709 6.578023 AGATTAGAAAGAAGGGATTCAGACG 58.422 40.000 0.00 0.00 0.00 4.18
704 710 6.989759 GGAGATTAGAAAGAAGGGATTCAGAC 59.010 42.308 0.00 0.00 0.00 3.51
705 711 6.100424 GGGAGATTAGAAAGAAGGGATTCAGA 59.900 42.308 0.00 0.00 0.00 3.27
706 712 6.126652 TGGGAGATTAGAAAGAAGGGATTCAG 60.127 42.308 0.00 0.00 0.00 3.02
707 713 5.731187 TGGGAGATTAGAAAGAAGGGATTCA 59.269 40.000 0.00 0.00 0.00 2.57
708 714 6.253946 TGGGAGATTAGAAAGAAGGGATTC 57.746 41.667 0.00 0.00 0.00 2.52
749 766 5.679601 AGAGATCATCAAAAGGTCTAAGGC 58.320 41.667 0.00 0.00 0.00 4.35
765 782 7.510675 AACCCTAACTAAATTGGAGAGATCA 57.489 36.000 0.00 0.00 0.00 2.92
766 783 9.901172 TTAAACCCTAACTAAATTGGAGAGATC 57.099 33.333 0.00 0.00 0.00 2.75
767 784 9.682465 GTTAAACCCTAACTAAATTGGAGAGAT 57.318 33.333 0.00 0.00 0.00 2.75
775 792 8.456471 GCGAGAATGTTAAACCCTAACTAAATT 58.544 33.333 0.00 0.00 0.00 1.82
778 795 5.577945 CGCGAGAATGTTAAACCCTAACTAA 59.422 40.000 0.00 0.00 0.00 2.24
780 797 3.930848 CGCGAGAATGTTAAACCCTAACT 59.069 43.478 0.00 0.00 0.00 2.24
781 798 3.928375 TCGCGAGAATGTTAAACCCTAAC 59.072 43.478 3.71 0.00 37.03 2.34
825 842 1.472082 CTGTATTGCCACAATGCGGAA 59.528 47.619 10.58 0.00 0.00 4.30
845 862 5.454232 GCATACAAAAACCATGCGTATGTAC 59.546 40.000 12.66 0.00 40.85 2.90
846 863 5.449314 GGCATACAAAAACCATGCGTATGTA 60.449 40.000 12.66 0.00 44.77 2.29
869 899 1.271840 TTACTACCAGGCAGGGCAGG 61.272 60.000 0.00 2.66 43.89 4.85
870 900 0.107654 GTTACTACCAGGCAGGGCAG 60.108 60.000 0.00 0.00 43.89 4.85
871 901 0.546747 AGTTACTACCAGGCAGGGCA 60.547 55.000 0.00 0.00 43.89 5.36
872 902 0.107654 CAGTTACTACCAGGCAGGGC 60.108 60.000 0.00 0.00 43.89 5.19
873 903 1.066143 CACAGTTACTACCAGGCAGGG 60.066 57.143 0.00 0.00 43.89 4.45
914 944 3.366052 AAGGGCATAACCGACAAGATT 57.634 42.857 0.00 0.00 40.62 2.40
947 984 6.660521 TCTTGGTCTGCATGTGAAATTAATCT 59.339 34.615 0.00 0.00 0.00 2.40
1021 1063 7.446001 TGAATTGTGCAGACAAATACATACA 57.554 32.000 0.00 0.00 45.23 2.29
1027 1069 7.013178 TCTGAAGTTGAATTGTGCAGACAAATA 59.987 33.333 0.00 0.00 45.23 1.40
1028 1070 5.904941 TGAAGTTGAATTGTGCAGACAAAT 58.095 33.333 0.00 0.00 45.23 2.32
1032 1074 4.274459 AGTCTGAAGTTGAATTGTGCAGAC 59.726 41.667 0.00 0.00 46.64 3.51
1069 1112 9.912634 CTTCCTCAATTTAAAGCTATTTGTGAA 57.087 29.630 0.00 1.54 0.00 3.18
1070 1113 8.028938 GCTTCCTCAATTTAAAGCTATTTGTGA 58.971 33.333 0.00 0.00 40.68 3.58
1071 1114 8.177980 GCTTCCTCAATTTAAAGCTATTTGTG 57.822 34.615 0.00 0.00 40.68 3.33
1195 1312 3.947834 AGGCCACTTTTGCATGTATAGAC 59.052 43.478 5.01 0.00 0.00 2.59
1251 1370 2.296471 AGTCAGGGTACAAACGACAGAG 59.704 50.000 0.00 0.00 0.00 3.35
1373 1508 5.771666 TGGTAGGGTACAGAATAATACCTCG 59.228 44.000 0.00 0.00 40.71 4.63
1374 1509 7.234988 ACATGGTAGGGTACAGAATAATACCTC 59.765 40.741 0.00 0.00 40.71 3.85
1375 1510 7.080353 ACATGGTAGGGTACAGAATAATACCT 58.920 38.462 0.00 0.00 40.71 3.08
1376 1511 7.312415 ACATGGTAGGGTACAGAATAATACC 57.688 40.000 0.00 0.00 40.25 2.73
1377 1512 7.876582 GGAACATGGTAGGGTACAGAATAATAC 59.123 40.741 0.00 0.00 0.00 1.89
1378 1513 7.016858 GGGAACATGGTAGGGTACAGAATAATA 59.983 40.741 0.00 0.00 0.00 0.98
1379 1514 6.183361 GGGAACATGGTAGGGTACAGAATAAT 60.183 42.308 0.00 0.00 0.00 1.28
1380 1515 5.131475 GGGAACATGGTAGGGTACAGAATAA 59.869 44.000 0.00 0.00 0.00 1.40
1399 1534 9.971922 CTGAAAATTATATTCATCCTTGGGAAC 57.028 33.333 0.00 0.00 36.30 3.62
1597 1732 6.683974 ATTCTGTAAAGTTGCTATTGCGAT 57.316 33.333 0.00 0.00 43.34 4.58
1642 1779 9.444600 TTTATCCACTAGTTAAAACCAGATGAC 57.555 33.333 0.00 0.00 0.00 3.06
1655 1792 8.191534 ACAGACAGTTACTTTATCCACTAGTT 57.808 34.615 0.00 0.00 0.00 2.24
1656 1793 7.778185 ACAGACAGTTACTTTATCCACTAGT 57.222 36.000 0.00 0.00 0.00 2.57
1698 1837 4.141135 TCTGAGTAATCAACACCCCCAAAA 60.141 41.667 0.00 0.00 0.00 2.44
1702 1841 3.713826 TTCTGAGTAATCAACACCCCC 57.286 47.619 0.00 0.00 0.00 5.40
1730 1869 1.867233 CAACGGTTCAACCTGACTGAG 59.133 52.381 4.68 0.00 35.66 3.35
1745 1884 1.539388 TGCTGGTTGCTATTTCAACGG 59.461 47.619 0.00 0.00 45.33 4.44
1746 1885 2.987413 TGCTGGTTGCTATTTCAACG 57.013 45.000 0.00 0.00 45.33 4.10
1747 1886 4.439305 TGATGCTGGTTGCTATTTCAAC 57.561 40.909 0.00 0.00 44.07 3.18
1748 1887 4.523943 ACTTGATGCTGGTTGCTATTTCAA 59.476 37.500 0.00 0.00 43.37 2.69
1749 1888 4.081406 ACTTGATGCTGGTTGCTATTTCA 58.919 39.130 0.00 0.00 43.37 2.69
1750 1889 4.156556 TCACTTGATGCTGGTTGCTATTTC 59.843 41.667 0.00 0.00 43.37 2.17
1751 1890 4.081406 TCACTTGATGCTGGTTGCTATTT 58.919 39.130 0.00 0.00 43.37 1.40
1752 1891 3.441572 GTCACTTGATGCTGGTTGCTATT 59.558 43.478 0.00 0.00 43.37 1.73
1774 1989 7.852945 GTCATAACTGAATCAAGCCTAATTTCG 59.147 37.037 0.00 0.00 31.85 3.46
1854 2106 2.426738 CACCTTGTTTGTGCTTTGGAGA 59.573 45.455 0.00 0.00 0.00 3.71
2012 2264 7.895975 TGAAGAAACACATTCATGAGTCTAG 57.104 36.000 0.00 0.00 40.72 2.43
2038 2296 3.766545 CGGGGAAATTGGATGGATGTAT 58.233 45.455 0.00 0.00 0.00 2.29
2183 2463 8.592809 ACTTGTTAATGGGAAAAGCAATTGATA 58.407 29.630 10.34 0.00 0.00 2.15
2249 2531 1.521423 GTGTGACGCACAGTACAGAAC 59.479 52.381 14.22 0.00 45.43 3.01
2343 2670 3.375647 TCCCCCTGGTTAGCATTTAAC 57.624 47.619 0.00 0.00 0.00 2.01
2385 2724 5.356882 ACATATAATCAACATTTCCGCGG 57.643 39.130 22.12 22.12 0.00 6.46
2629 2985 5.356190 CACCAAAGACACAGCTATCATCAAT 59.644 40.000 0.00 0.00 0.00 2.57
3068 5189 5.005012 TCGTTCTTGAATTTTCTATACGCCG 59.995 40.000 0.00 0.00 0.00 6.46
3086 5212 9.924650 AGTACTACATTGTTTCTAATTCGTTCT 57.075 29.630 0.00 0.00 0.00 3.01
3210 5538 2.875933 ACACATACAAGAACCGGTTGTG 59.124 45.455 27.87 25.90 38.58 3.33
3295 5647 5.777802 TGGTGGCATTACAATTGTACAAAG 58.222 37.500 17.85 10.85 0.00 2.77
3683 6105 5.250235 TGCGATTCACCACAAAAGTAAAA 57.750 34.783 0.00 0.00 0.00 1.52
3734 6162 4.580167 CCATTCCCTGTACACATACCAATG 59.420 45.833 0.00 0.00 39.17 2.82
4046 6560 6.507023 GGAACTCATCAACTGACAAACATTT 58.493 36.000 0.00 0.00 0.00 2.32
4158 6680 1.453155 TTGGATCGAAAGGAAGCAGC 58.547 50.000 0.00 0.00 0.00 5.25
4385 6929 1.072332 AACATAGTGTGGCGTGCCA 59.928 52.632 10.06 10.06 45.02 4.92
4654 7211 2.898705 TGCGCAACAAAACCTCAAAAT 58.101 38.095 8.16 0.00 0.00 1.82
4671 7230 3.535561 ACCTCCATCTGACTAATTTGCG 58.464 45.455 0.00 0.00 0.00 4.85
4698 7257 3.003480 GTCAAGCTTATTCAAGACCGCT 58.997 45.455 0.00 0.00 33.20 5.52
4701 7260 6.325596 GGAAATGTCAAGCTTATTCAAGACC 58.674 40.000 0.00 1.27 33.20 3.85
4738 7297 4.539509 CTACTGTAGCTAGGTTCGTGAG 57.460 50.000 0.00 0.00 0.00 3.51
4780 7339 7.376866 GTCGATACTTAAAATCATGGCATGTTG 59.623 37.037 25.62 8.94 0.00 3.33
4797 7356 8.742777 TGTACCTTACAATGTTAGTCGATACTT 58.257 33.333 0.00 0.00 34.87 2.24
4798 7357 8.186821 GTGTACCTTACAATGTTAGTCGATACT 58.813 37.037 0.00 0.00 40.93 2.12
4799 7358 7.970061 TGTGTACCTTACAATGTTAGTCGATAC 59.030 37.037 0.00 0.00 40.93 2.24
4800 7359 7.970061 GTGTGTACCTTACAATGTTAGTCGATA 59.030 37.037 0.00 0.00 40.93 2.92
4801 7360 6.810182 GTGTGTACCTTACAATGTTAGTCGAT 59.190 38.462 0.00 0.00 40.93 3.59
4802 7361 6.151691 GTGTGTACCTTACAATGTTAGTCGA 58.848 40.000 0.00 0.00 40.93 4.20
4803 7362 5.060077 CGTGTGTACCTTACAATGTTAGTCG 59.940 44.000 0.00 0.00 40.93 4.18
4804 7363 6.151691 TCGTGTGTACCTTACAATGTTAGTC 58.848 40.000 0.00 0.00 40.93 2.59
4805 7364 6.088016 TCGTGTGTACCTTACAATGTTAGT 57.912 37.500 0.00 0.00 40.93 2.24
4830 7389 6.712276 TGTTTTTGTCAAAGGGGTTGTAAAT 58.288 32.000 0.00 0.00 38.47 1.40
4838 7397 2.877786 GCCATTGTTTTTGTCAAAGGGG 59.122 45.455 0.00 0.00 35.18 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.