Multiple sequence alignment - TraesCS3B01G461800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G461800 chr3B 100.000 7914 0 0 1 7914 704713591 704705678 0.000000e+00 14615.0
1 TraesCS3B01G461800 chr3B 89.005 382 32 7 7534 7913 199542507 199542880 1.560000e-126 464.0
2 TraesCS3B01G461800 chr3B 93.333 45 2 1 4081 4124 704709313 704709357 1.840000e-06 65.8
3 TraesCS3B01G461800 chr3B 93.333 45 2 1 4235 4279 704709468 704709511 1.840000e-06 65.8
4 TraesCS3B01G461800 chr3A 93.835 5969 269 37 1553 7482 667798773 667792865 0.000000e+00 8892.0
5 TraesCS3B01G461800 chr3A 88.433 951 72 24 618 1558 667799735 667798813 0.000000e+00 1112.0
6 TraesCS3B01G461800 chr3A 89.005 382 32 7 7534 7913 719994019 719993646 1.560000e-126 464.0
7 TraesCS3B01G461800 chr3A 85.393 178 22 3 5372 5546 184660489 184660665 1.750000e-41 182.0
8 TraesCS3B01G461800 chr3A 93.846 65 3 1 4162 4226 667796437 667796374 6.540000e-16 97.1
9 TraesCS3B01G461800 chr3A 95.556 45 1 1 4235 4279 667796229 667796272 3.960000e-08 71.3
10 TraesCS3B01G461800 chr3A 93.333 45 2 1 4081 4124 667796074 667796118 1.840000e-06 65.8
11 TraesCS3B01G461800 chr3D 94.841 5582 206 22 1932 7482 532693166 532687636 0.000000e+00 8637.0
12 TraesCS3B01G461800 chr3D 84.343 1584 179 29 8 1558 532695007 532693460 0.000000e+00 1487.0
13 TraesCS3B01G461800 chr3D 89.051 274 11 9 1553 1824 532693419 532693163 9.910000e-84 322.0
14 TraesCS3B01G461800 chr3D 92.308 65 4 1 4162 4226 532691189 532691126 3.040000e-14 91.6
15 TraesCS3B01G461800 chr3D 90.769 65 5 1 3915 3978 532690942 532690878 1.410000e-12 86.1
16 TraesCS3B01G461800 chr3D 95.556 45 1 1 4235 4279 532690980 532691023 3.960000e-08 71.3
17 TraesCS3B01G461800 chr1B 81.599 663 96 9 4278 4932 668953967 668954611 7.040000e-145 525.0
18 TraesCS3B01G461800 chr1B 87.648 421 42 8 7495 7913 675361878 675362290 1.540000e-131 481.0
19 TraesCS3B01G461800 chr1B 85.222 406 51 9 3710 4110 668953427 668953828 7.390000e-110 409.0
20 TraesCS3B01G461800 chr5B 87.793 426 41 8 7491 7913 640284145 640284562 9.230000e-134 488.0
21 TraesCS3B01G461800 chr4A 87.619 420 43 7 7495 7913 735689337 735688926 5.560000e-131 479.0
22 TraesCS3B01G461800 chr4A 87.441 422 42 8 7495 7913 626008536 626008949 7.190000e-130 475.0
23 TraesCS3B01G461800 chr4A 74.762 210 42 9 66 270 178986576 178986373 5.090000e-12 84.2
24 TraesCS3B01G461800 chr2B 87.619 420 42 7 7495 7913 391902673 391903083 5.560000e-131 479.0
25 TraesCS3B01G461800 chr1D 88.366 404 40 6 3710 4110 480583548 480583947 5.560000e-131 479.0
26 TraesCS3B01G461800 chr1A 87.143 420 45 7 7495 7913 482800662 482801073 1.200000e-127 468.0
27 TraesCS3B01G461800 chr1A 86.730 422 45 8 7495 7913 587857838 587858251 7.240000e-125 459.0
28 TraesCS3B01G461800 chr1A 96.154 52 2 0 4097 4148 576900272 576900323 1.410000e-12 86.1
29 TraesCS3B01G461800 chr5A 87.640 178 18 3 5372 5546 502611571 502611747 3.740000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G461800 chr3B 704705678 704713591 7913 True 14615.000000 14615 100.0000 1 7914 1 chr3B.!!$R1 7913
1 TraesCS3B01G461800 chr3A 667792865 667799735 6870 True 3367.033333 8892 92.0380 618 7482 3 chr3A.!!$R2 6864
2 TraesCS3B01G461800 chr3D 532687636 532695007 7371 True 2124.740000 8637 90.2624 8 7482 5 chr3D.!!$R1 7474
3 TraesCS3B01G461800 chr1B 668953427 668954611 1184 False 467.000000 525 83.4105 3710 4932 2 chr1B.!!$F2 1222

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
50 51 0.036388 ATGCTCGACAACGGTTGGAT 60.036 50.000 23.51 4.77 40.21 3.41 F
738 763 0.106469 TCCGGCTGTAGATGCTCTCT 60.106 55.000 0.00 0.00 38.06 3.10 F
1924 2016 0.038892 TTACGGTCTTCTCGTGCCAC 60.039 55.000 0.00 0.00 41.24 5.01 F
2223 2315 0.187117 TCCTTTTGGTGTGGCATGGA 59.813 50.000 0.00 0.00 41.38 3.41 F
2247 2339 0.321346 TTGATGACGAGCAGCTGGAA 59.679 50.000 17.12 0.00 33.04 3.53 F
3945 4038 0.397535 ATTTGGAGAATGCCGCCCAT 60.398 50.000 0.00 0.00 33.31 4.00 F
4192 4404 1.134907 CATTTGGAGAATGCTGCCCAC 60.135 52.381 0.00 0.00 0.00 4.61 F
5374 5594 0.321564 CTGGCACGGACAAGAATCCA 60.322 55.000 0.00 0.00 38.87 3.41 F
6413 6648 0.392461 CCGTGGGGAACATGTACCTG 60.392 60.000 16.45 8.80 34.14 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1910 2002 0.601558 TACTGGTGGCACGAGAAGAC 59.398 55.000 32.21 8.65 0.00 3.01 R
2203 2295 0.318120 CCATGCCACACCAAAAGGAC 59.682 55.000 0.00 0.00 0.00 3.85 R
3819 3912 0.603707 ATCACCTGTGGCACGAGTTG 60.604 55.000 13.77 10.19 0.00 3.16 R
3980 4073 2.715336 AGTAGGCCGTCTATAAGGAGGA 59.285 50.000 0.00 0.00 0.00 3.71 R
4180 4392 3.915575 CCTCAGTGGGCAGCATTC 58.084 61.111 0.00 0.00 0.00 2.67 R
4963 5183 0.250901 CCACTAGCAGCCCACTGTTT 60.251 55.000 0.00 0.00 46.30 2.83 R
5467 5696 0.455633 GCAACATCTTCTTGCTGGCG 60.456 55.000 0.00 0.00 40.79 5.69 R
6780 7015 0.179134 GTCGTGCTAGTGGCCTAGTG 60.179 60.000 3.32 0.00 42.35 2.74 R
7564 7819 0.178888 GAGGGGATTAGGAGGAGGGG 60.179 65.000 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 1.429463 GAGAATGCTCGACAACGGTT 58.571 50.000 0.00 0.00 40.21 4.44
50 51 0.036388 ATGCTCGACAACGGTTGGAT 60.036 50.000 23.51 4.77 40.21 3.41
51 52 0.948623 TGCTCGACAACGGTTGGATG 60.949 55.000 23.51 13.02 40.21 3.51
69 70 2.307934 TGCGATCCATCACGAAATCA 57.692 45.000 0.00 0.00 0.00 2.57
86 87 3.202001 ATCGCGTCCGCCCAAATG 61.202 61.111 5.77 0.00 37.98 2.32
89 90 4.114997 GCGTCCGCCCAAATGGTG 62.115 66.667 0.00 0.00 44.77 4.17
99 100 1.037030 CCAAATGGTGGGTGGATCCG 61.037 60.000 7.39 0.00 44.64 4.18
101 102 2.854300 AAATGGTGGGTGGATCCGGC 62.854 60.000 7.39 2.16 37.00 6.13
124 125 2.035442 GGCAGGTCGCAACTTCCTC 61.035 63.158 0.00 0.00 45.17 3.71
127 128 3.119096 GGTCGCAACTTCCTCGGC 61.119 66.667 0.00 0.00 0.00 5.54
185 186 3.723348 GACGCGCAACCCCTTCAC 61.723 66.667 5.73 0.00 0.00 3.18
187 188 2.047655 CGCGCAACCCCTTCACTA 60.048 61.111 8.75 0.00 0.00 2.74
189 190 1.003718 GCGCAACCCCTTCACTAGT 60.004 57.895 0.30 0.00 0.00 2.57
190 191 1.298859 GCGCAACCCCTTCACTAGTG 61.299 60.000 17.17 17.17 0.00 2.74
191 192 1.298859 CGCAACCCCTTCACTAGTGC 61.299 60.000 18.45 2.02 0.00 4.40
197 198 1.141881 CCTTCACTAGTGCGCCGAT 59.858 57.895 18.45 0.00 0.00 4.18
201 202 1.153842 CACTAGTGCGCCGATGACA 60.154 57.895 10.54 0.00 0.00 3.58
202 203 0.528466 CACTAGTGCGCCGATGACAT 60.528 55.000 10.54 0.00 0.00 3.06
210 211 1.526686 GCCGATGACATGGCCATCA 60.527 57.895 17.61 14.10 45.73 3.07
212 213 0.179037 CCGATGACATGGCCATCAGT 60.179 55.000 17.61 12.43 40.17 3.41
216 217 0.986527 TGACATGGCCATCAGTGTCT 59.013 50.000 28.59 2.20 41.08 3.41
217 218 1.065926 TGACATGGCCATCAGTGTCTC 60.066 52.381 28.59 12.12 41.08 3.36
218 219 0.107993 ACATGGCCATCAGTGTCTCG 60.108 55.000 17.61 3.55 0.00 4.04
220 221 0.176680 ATGGCCATCAGTGTCTCGTC 59.823 55.000 14.09 0.00 0.00 4.20
241 242 1.079197 CTGAGTGTATGGCGTGGCA 60.079 57.895 0.00 0.00 0.00 4.92
263 264 4.662961 CACCGTGCGAGGCAGACA 62.663 66.667 0.00 0.00 40.08 3.41
274 275 3.121030 GCAGACAGCGCGGAATGT 61.121 61.111 16.26 7.22 0.00 2.71
277 278 2.809601 GACAGCGCGGAATGTCGT 60.810 61.111 16.26 0.00 36.76 4.34
284 285 2.740714 GCGGAATGTCGTGGCAGTC 61.741 63.158 0.00 0.00 33.28 3.51
287 288 0.741221 GGAATGTCGTGGCAGTCCTC 60.741 60.000 13.26 0.00 46.53 3.71
297 298 2.202362 CAGTCCTCGCGACAGACG 60.202 66.667 22.17 15.72 44.66 4.18
299 300 2.254651 GTCCTCGCGACAGACGTT 59.745 61.111 16.28 0.00 44.60 3.99
301 302 2.254350 CCTCGCGACAGACGTTGA 59.746 61.111 3.71 0.00 44.60 3.18
309 310 2.125912 CAGACGTTGAGGAGGCGG 60.126 66.667 0.00 0.00 0.00 6.13
313 314 2.156051 GACGTTGAGGAGGCGGAGTT 62.156 60.000 0.00 0.00 0.00 3.01
314 315 1.738099 CGTTGAGGAGGCGGAGTTG 60.738 63.158 0.00 0.00 0.00 3.16
339 340 4.147449 TGGCGCCTCGAGTGATGG 62.147 66.667 29.70 0.00 0.00 3.51
375 376 2.202171 GCAACCGCGTCATGTTCG 60.202 61.111 4.92 8.24 0.00 3.95
402 403 1.536922 CCTCCGACCATGACAGATTCG 60.537 57.143 0.00 0.00 0.00 3.34
404 405 1.548719 TCCGACCATGACAGATTCGTT 59.451 47.619 0.00 0.00 0.00 3.85
408 409 2.337583 ACCATGACAGATTCGTTGTCG 58.662 47.619 0.00 0.00 46.14 4.35
409 410 1.660607 CCATGACAGATTCGTTGTCGG 59.339 52.381 0.00 0.00 46.14 4.79
412 413 1.359459 GACAGATTCGTTGTCGGCCC 61.359 60.000 0.00 0.00 36.01 5.80
416 417 2.798148 GATTCGTTGTCGGCCCCACT 62.798 60.000 0.00 0.00 37.69 4.00
419 420 2.430367 GTTGTCGGCCCCACTTCT 59.570 61.111 0.00 0.00 0.00 2.85
422 423 0.834687 TTGTCGGCCCCACTTCTACT 60.835 55.000 0.00 0.00 0.00 2.57
428 429 0.977395 GCCCCACTTCTACTGACACT 59.023 55.000 0.00 0.00 0.00 3.55
431 432 2.289072 CCCCACTTCTACTGACACTGTG 60.289 54.545 6.19 6.19 0.00 3.66
440 441 0.394192 CTGACACTGTGAAGGCTCCA 59.606 55.000 15.86 0.34 0.00 3.86
443 444 0.683973 ACACTGTGAAGGCTCCAGAG 59.316 55.000 15.86 6.09 0.00 3.35
445 446 1.895798 CACTGTGAAGGCTCCAGAGTA 59.104 52.381 2.55 0.00 36.21 2.59
446 447 2.094286 CACTGTGAAGGCTCCAGAGTAG 60.094 54.545 2.55 0.00 36.21 2.57
455 475 2.815019 TCCAGAGTAGGGGGAGACA 58.185 57.895 0.00 0.00 0.00 3.41
456 476 1.319947 TCCAGAGTAGGGGGAGACAT 58.680 55.000 0.00 0.00 0.00 3.06
479 499 0.979709 CTCCCTGAGTCCCATGAGCA 60.980 60.000 0.00 0.00 0.00 4.26
483 503 0.107800 CTGAGTCCCATGAGCAGGTG 60.108 60.000 0.00 0.00 0.00 4.00
484 504 0.837691 TGAGTCCCATGAGCAGGTGT 60.838 55.000 0.00 0.00 0.00 4.16
500 522 2.623889 AGGTGTGCGTCATATCCTACTC 59.376 50.000 0.00 0.00 0.00 2.59
506 528 4.154556 GTGCGTCATATCCTACTCTACCTC 59.845 50.000 0.00 0.00 0.00 3.85
511 533 2.279935 ATCCTACTCTACCTCGCTGG 57.720 55.000 0.00 0.00 42.93 4.85
526 548 1.639298 GCTGGTGATCGGAGCAACAC 61.639 60.000 10.37 4.14 32.70 3.32
533 555 1.734465 GATCGGAGCAACACTTTGAGG 59.266 52.381 0.00 0.00 34.24 3.86
560 582 3.319198 AACCGCCGGACATGGACT 61.319 61.111 11.71 0.00 0.00 3.85
563 585 4.873129 CGCCGGACATGGACTCGG 62.873 72.222 5.05 11.96 44.70 4.63
579 601 2.032681 GGTGAAGCCGGACAAGCT 59.967 61.111 5.05 0.00 44.19 3.74
589 611 3.249687 GGACAAGCTCCGTTTGGAT 57.750 52.632 0.00 0.00 45.33 3.41
591 613 2.706890 GGACAAGCTCCGTTTGGATTA 58.293 47.619 0.00 0.00 45.33 1.75
593 615 3.596214 GACAAGCTCCGTTTGGATTAGA 58.404 45.455 0.00 0.00 45.33 2.10
600 622 6.177610 AGCTCCGTTTGGATTAGATTTTACA 58.822 36.000 0.00 0.00 45.33 2.41
602 624 6.912591 GCTCCGTTTGGATTAGATTTTACATG 59.087 38.462 0.00 0.00 45.33 3.21
606 628 7.032580 CGTTTGGATTAGATTTTACATGGCAA 58.967 34.615 0.00 0.00 0.00 4.52
608 630 7.716799 TTGGATTAGATTTTACATGGCAAGT 57.283 32.000 0.00 0.00 0.00 3.16
690 714 2.867429 CGTTAATAGGTCGTTGTCCGT 58.133 47.619 0.00 0.00 37.94 4.69
692 716 3.670359 CGTTAATAGGTCGTTGTCCGTGA 60.670 47.826 0.00 0.00 37.94 4.35
703 727 0.684535 TGTCCGTGAGCATTTGAGGA 59.315 50.000 0.00 0.00 0.00 3.71
705 729 0.976641 TCCGTGAGCATTTGAGGAGT 59.023 50.000 0.00 0.00 0.00 3.85
721 746 4.192317 GAGGAGTTGAATGTGGTGTATCC 58.808 47.826 0.00 0.00 0.00 2.59
722 747 2.936498 GGAGTTGAATGTGGTGTATCCG 59.064 50.000 0.00 0.00 39.52 4.18
724 749 1.400494 GTTGAATGTGGTGTATCCGGC 59.600 52.381 0.00 0.00 39.52 6.13
725 750 0.908910 TGAATGTGGTGTATCCGGCT 59.091 50.000 0.00 0.00 39.52 5.52
726 751 1.299541 GAATGTGGTGTATCCGGCTG 58.700 55.000 0.00 0.00 39.52 4.85
727 752 0.618458 AATGTGGTGTATCCGGCTGT 59.382 50.000 0.00 0.00 39.52 4.40
728 753 1.491668 ATGTGGTGTATCCGGCTGTA 58.508 50.000 0.00 0.00 39.52 2.74
729 754 0.821517 TGTGGTGTATCCGGCTGTAG 59.178 55.000 0.00 0.00 39.52 2.74
730 755 1.108776 GTGGTGTATCCGGCTGTAGA 58.891 55.000 0.00 0.00 39.52 2.59
731 756 1.687123 GTGGTGTATCCGGCTGTAGAT 59.313 52.381 0.00 0.00 39.52 1.98
732 757 1.686587 TGGTGTATCCGGCTGTAGATG 59.313 52.381 0.00 0.00 39.52 2.90
733 758 1.605712 GGTGTATCCGGCTGTAGATGC 60.606 57.143 0.00 0.00 0.00 3.91
734 759 1.341531 GTGTATCCGGCTGTAGATGCT 59.658 52.381 0.00 0.00 0.00 3.79
735 760 1.613925 TGTATCCGGCTGTAGATGCTC 59.386 52.381 0.00 0.00 0.00 4.26
736 761 1.889829 GTATCCGGCTGTAGATGCTCT 59.110 52.381 0.00 0.00 0.00 4.09
737 762 0.965439 ATCCGGCTGTAGATGCTCTC 59.035 55.000 0.00 0.00 0.00 3.20
738 763 0.106469 TCCGGCTGTAGATGCTCTCT 60.106 55.000 0.00 0.00 38.06 3.10
746 771 5.695816 GGCTGTAGATGCTCTCTCTAATTTG 59.304 44.000 0.00 0.00 35.28 2.32
754 779 6.114187 TGCTCTCTCTAATTTGTTTCCTCA 57.886 37.500 0.00 0.00 0.00 3.86
755 780 6.533730 TGCTCTCTCTAATTTGTTTCCTCAA 58.466 36.000 0.00 0.00 0.00 3.02
763 788 2.668550 GTTTCCTCAACGGGCGCT 60.669 61.111 7.64 0.00 0.00 5.92
764 789 2.112297 TTTCCTCAACGGGCGCTT 59.888 55.556 7.64 0.00 0.00 4.68
765 790 2.258013 TTTCCTCAACGGGCGCTTG 61.258 57.895 7.64 4.14 0.00 4.01
783 809 4.789075 CCACGCCCCGACACGTAG 62.789 72.222 0.00 0.00 41.32 3.51
788 814 1.005867 GCCCCGACACGTAGAAACA 60.006 57.895 0.00 0.00 0.00 2.83
789 815 0.600782 GCCCCGACACGTAGAAACAA 60.601 55.000 0.00 0.00 0.00 2.83
792 818 3.788937 CCCCGACACGTAGAAACAATAT 58.211 45.455 0.00 0.00 0.00 1.28
808 834 9.284968 AGAAACAATATTTCCTTTTCTCGAGAA 57.715 29.630 23.74 23.74 32.28 2.87
811 837 9.678941 AACAATATTTCCTTTTCTCGAGAAAAC 57.321 29.630 37.30 0.00 45.76 2.43
819 845 5.407387 CCTTTTCTCGAGAAAACCGAACATA 59.593 40.000 37.30 21.07 45.76 2.29
820 846 5.834239 TTTCTCGAGAAAACCGAACATAC 57.166 39.130 32.77 0.00 40.68 2.39
821 847 3.495193 TCTCGAGAAAACCGAACATACG 58.505 45.455 14.01 0.00 35.48 3.06
822 848 3.058016 TCTCGAGAAAACCGAACATACGT 60.058 43.478 14.01 0.00 35.48 3.57
865 900 4.882396 GCGCGCTTCCCTCCTCTC 62.882 72.222 26.67 0.00 0.00 3.20
866 901 4.214327 CGCGCTTCCCTCCTCTCC 62.214 72.222 5.56 0.00 0.00 3.71
867 902 2.762043 GCGCTTCCCTCCTCTCCT 60.762 66.667 0.00 0.00 0.00 3.69
868 903 2.791868 GCGCTTCCCTCCTCTCCTC 61.792 68.421 0.00 0.00 0.00 3.71
869 904 2.131067 CGCTTCCCTCCTCTCCTCC 61.131 68.421 0.00 0.00 0.00 4.30
870 905 1.764454 GCTTCCCTCCTCTCCTCCC 60.764 68.421 0.00 0.00 0.00 4.30
991 1026 0.930726 TTCTCTCCCCTCTCCTCTCC 59.069 60.000 0.00 0.00 0.00 3.71
1017 1052 4.411013 TCTCTCTCTTGACAGTTCCATCA 58.589 43.478 0.00 0.00 0.00 3.07
1060 1096 0.986019 TCTCCCTCTCTCTCTCGCCT 60.986 60.000 0.00 0.00 0.00 5.52
1071 1107 0.319555 CTCTCGCCTCAACGGAACAA 60.320 55.000 0.00 0.00 33.16 2.83
1074 1110 0.462225 TCGCCTCAACGGAACAAACA 60.462 50.000 0.00 0.00 33.16 2.83
1080 1116 2.152016 TCAACGGAACAAACACACACA 58.848 42.857 0.00 0.00 0.00 3.72
1136 1172 0.669318 GCAACGAGTGGATCAACGGA 60.669 55.000 0.00 0.00 0.00 4.69
1142 1178 2.100916 CGAGTGGATCAACGGATACCTT 59.899 50.000 0.00 0.00 32.99 3.50
1151 1187 1.991121 ACGGATACCTTGAGGCGATA 58.009 50.000 0.00 0.00 39.32 2.92
1163 1199 2.408022 GCGATACTCGACAGCGGT 59.592 61.111 0.00 0.00 43.74 5.68
1169 1205 4.406173 CTCGACAGCGGTGCGTCT 62.406 66.667 23.37 3.52 38.28 4.18
1364 1406 0.392863 CATGGATCAAGGTCGTGGCA 60.393 55.000 0.00 0.00 0.00 4.92
1505 1549 0.179233 CGTCTCGTGTTCGTCGATCA 60.179 55.000 1.85 1.85 36.73 2.92
1522 1566 5.016173 TCGATCAATCCCCTTGTTGATTTT 58.984 37.500 2.55 0.00 43.16 1.82
1563 1653 2.423577 GGTCGGTTGATTGCTAACTGT 58.576 47.619 0.00 0.00 36.16 3.55
1693 1784 4.487948 AGATCGGTCATTTCGTCGTTTAA 58.512 39.130 0.00 0.00 0.00 1.52
1700 1791 5.742926 GGTCATTTCGTCGTTTAAAAACCAA 59.257 36.000 0.19 0.00 35.51 3.67
1705 1796 7.439204 TTTCGTCGTTTAAAAACCAAATCAG 57.561 32.000 0.19 0.00 35.51 2.90
1730 1821 2.843401 AGGCATGCATGATCTCTCTC 57.157 50.000 30.64 9.40 0.00 3.20
1731 1822 2.331166 AGGCATGCATGATCTCTCTCT 58.669 47.619 30.64 9.95 0.00 3.10
1732 1823 2.300723 AGGCATGCATGATCTCTCTCTC 59.699 50.000 30.64 7.92 0.00 3.20
1733 1824 2.300723 GGCATGCATGATCTCTCTCTCT 59.699 50.000 30.64 0.00 0.00 3.10
1734 1825 3.322369 GCATGCATGATCTCTCTCTCTG 58.678 50.000 30.64 0.00 0.00 3.35
1735 1826 3.322369 CATGCATGATCTCTCTCTCTGC 58.678 50.000 22.59 0.00 0.00 4.26
1736 1827 1.337387 TGCATGATCTCTCTCTCTGCG 59.663 52.381 0.00 0.00 31.39 5.18
1737 1828 1.931709 GCATGATCTCTCTCTCTGCGC 60.932 57.143 0.00 0.00 0.00 6.09
1738 1829 0.961019 ATGATCTCTCTCTCTGCGCC 59.039 55.000 4.18 0.00 0.00 6.53
1739 1830 0.106769 TGATCTCTCTCTCTGCGCCT 60.107 55.000 4.18 0.00 0.00 5.52
1740 1831 0.593128 GATCTCTCTCTCTGCGCCTC 59.407 60.000 4.18 0.00 0.00 4.70
1741 1832 0.183492 ATCTCTCTCTCTGCGCCTCT 59.817 55.000 4.18 0.00 0.00 3.69
1742 1833 0.747644 TCTCTCTCTCTGCGCCTCTG 60.748 60.000 4.18 0.00 0.00 3.35
1743 1834 0.747644 CTCTCTCTCTGCGCCTCTGA 60.748 60.000 4.18 0.00 0.00 3.27
1744 1835 0.747644 TCTCTCTCTGCGCCTCTGAG 60.748 60.000 4.18 7.70 40.78 3.35
1745 1836 1.727511 CTCTCTCTGCGCCTCTGAGG 61.728 65.000 19.55 19.55 40.11 3.86
1772 1863 6.433404 AGGTTTCGAGAATTCAGTACTCTGTA 59.567 38.462 8.44 0.00 41.91 2.74
1773 1864 6.748198 GGTTTCGAGAATTCAGTACTCTGTAG 59.252 42.308 8.44 0.00 41.91 2.74
1774 1865 7.361885 GGTTTCGAGAATTCAGTACTCTGTAGA 60.362 40.741 8.44 0.00 41.91 2.59
1775 1866 7.867305 TTCGAGAATTCAGTACTCTGTAGAT 57.133 36.000 8.44 0.00 41.91 1.98
1776 1867 7.252965 TCGAGAATTCAGTACTCTGTAGATG 57.747 40.000 8.44 0.00 41.91 2.90
1777 1868 7.048512 TCGAGAATTCAGTACTCTGTAGATGA 58.951 38.462 8.44 0.00 41.91 2.92
1790 1881 6.889177 ACTCTGTAGATGATCTCAGAGACAAA 59.111 38.462 33.50 11.43 43.47 2.83
1791 1882 7.094508 TCTGTAGATGATCTCAGAGACAAAC 57.905 40.000 15.72 4.93 31.71 2.93
1792 1883 6.660949 TCTGTAGATGATCTCAGAGACAAACA 59.339 38.462 15.72 8.47 31.71 2.83
1793 1884 6.625362 TGTAGATGATCTCAGAGACAAACAC 58.375 40.000 0.91 0.00 0.00 3.32
1794 1885 5.735285 AGATGATCTCAGAGACAAACACA 57.265 39.130 0.91 0.00 0.00 3.72
1795 1886 5.477510 AGATGATCTCAGAGACAAACACAC 58.522 41.667 0.91 0.94 0.00 3.82
1796 1887 4.670896 TGATCTCAGAGACAAACACACA 57.329 40.909 0.91 0.00 0.00 3.72
1797 1888 4.371786 TGATCTCAGAGACAAACACACAC 58.628 43.478 0.91 0.00 0.00 3.82
1798 1889 2.809446 TCTCAGAGACAAACACACACG 58.191 47.619 0.00 0.00 0.00 4.49
1799 1890 2.425668 TCTCAGAGACAAACACACACGA 59.574 45.455 0.00 0.00 0.00 4.35
1803 1894 3.804325 CAGAGACAAACACACACGATCTT 59.196 43.478 0.00 0.00 0.00 2.40
1874 1966 3.684305 TGTACCATTGCTGATCGTTTCTG 59.316 43.478 0.00 0.00 0.00 3.02
1885 1977 2.118228 TCGTTTCTGCACACAAATGC 57.882 45.000 0.00 0.00 46.32 3.56
1901 1993 6.455360 ACAAATGCTGTGAAAAGAGAAAGA 57.545 33.333 0.00 0.00 36.69 2.52
1910 2002 7.421530 TGTGAAAAGAGAAAGAGAATTACGG 57.578 36.000 0.00 0.00 0.00 4.02
1924 2016 0.038892 TTACGGTCTTCTCGTGCCAC 60.039 55.000 0.00 0.00 41.24 5.01
1955 2047 3.671702 GCTGATAAGTTGGCTTGCACTTC 60.672 47.826 2.33 0.00 34.92 3.01
1979 2071 2.310052 CCCCTCCCATTTTCTCTCAACT 59.690 50.000 0.00 0.00 0.00 3.16
1985 2077 3.760684 CCCATTTTCTCTCAACTGAAGGG 59.239 47.826 0.00 0.00 0.00 3.95
1998 2090 0.401356 TGAAGGGAACTGCATCTGCA 59.599 50.000 4.58 4.58 42.77 4.41
2051 2143 3.444034 GGAAAACACTAGGAATTGCTCCC 59.556 47.826 1.37 0.00 46.81 4.30
2070 2162 8.335532 TGCTCCCACTGCATATATTTATAAAC 57.664 34.615 0.00 0.00 35.31 2.01
2094 2186 5.560722 TTTGGAATGAGTCTGTACAGGAA 57.439 39.130 22.48 1.20 0.00 3.36
2142 2234 8.620116 AATAAAAACATAAGGCATTTGCAGTT 57.380 26.923 4.74 0.16 44.36 3.16
2156 2248 6.595794 CATTTGCAGTTTTATTTCTTGCCAG 58.404 36.000 0.00 0.00 0.00 4.85
2203 2295 3.730715 GGTCACGCTTCTGAACATTTTTG 59.269 43.478 0.00 0.00 0.00 2.44
2219 2311 1.561643 TTTGTCCTTTTGGTGTGGCA 58.438 45.000 0.00 0.00 41.38 4.92
2223 2315 0.187117 TCCTTTTGGTGTGGCATGGA 59.813 50.000 0.00 0.00 41.38 3.41
2247 2339 0.321346 TTGATGACGAGCAGCTGGAA 59.679 50.000 17.12 0.00 33.04 3.53
2283 2375 1.880340 GATGTCGGCTCGGCAGAAG 60.880 63.158 7.86 0.00 46.78 2.85
2293 2385 1.743252 CGGCAGAAGGAACAGGAGC 60.743 63.158 0.00 0.00 0.00 4.70
2298 2390 0.980423 AGAAGGAACAGGAGCAGGTC 59.020 55.000 0.00 0.00 0.00 3.85
2492 2584 7.020827 TCATCAGGTCTCATTCTTAAACCTT 57.979 36.000 0.00 0.00 38.27 3.50
2493 2585 6.881065 TCATCAGGTCTCATTCTTAAACCTTG 59.119 38.462 0.00 0.00 38.27 3.61
2500 2592 3.436704 TCATTCTTAAACCTTGCAGCTCG 59.563 43.478 0.00 0.00 0.00 5.03
2517 2609 4.022329 CAGCTCGGTTAACCAATTCCTTTT 60.022 41.667 24.14 0.00 35.14 2.27
2536 2628 7.883217 TCCTTTTACTTCTATCCTATACTGCG 58.117 38.462 0.00 0.00 0.00 5.18
2542 2634 3.072211 TCTATCCTATACTGCGTGACCG 58.928 50.000 0.00 0.00 37.07 4.79
2565 2657 2.031245 TGCCATGTTGATGTCGTGAAAC 60.031 45.455 0.00 0.00 0.00 2.78
2574 2666 6.743627 TGTTGATGTCGTGAAACTTTTACAAC 59.256 34.615 0.00 0.00 36.07 3.32
2684 2776 5.912360 AACCGAACCGAACTTTTAGTTAG 57.088 39.130 0.00 0.00 38.80 2.34
2746 2838 4.408276 ACTTATGGCGAGCTATTCTCCTA 58.592 43.478 0.00 0.00 38.62 2.94
2835 2927 2.067013 GACCTGTTTACTCGCCAAGTC 58.933 52.381 0.00 0.00 39.55 3.01
2922 3014 2.363147 GAGGGGAGCGGTGAGAGT 60.363 66.667 0.00 0.00 0.00 3.24
3015 3107 5.316987 CCTTACCTCCAAGAGTTTGTTGAT 58.683 41.667 0.00 0.00 32.21 2.57
3147 3239 1.302832 CGCTGCCCTTCTTTCTGGT 60.303 57.895 0.00 0.00 0.00 4.00
3151 3243 2.982744 GCCCTTCTTTCTGGTGCGC 61.983 63.158 0.00 0.00 0.00 6.09
3222 3314 3.117776 TGGAGCAGATTATGATGCAAGGT 60.118 43.478 0.00 0.00 43.12 3.50
3297 3389 1.307691 AGAGGAGCTGGCCTTGGAT 60.308 57.895 3.32 0.00 38.73 3.41
3470 3563 4.101119 GGTGAGTGCCAGTACCAAGTATAT 59.899 45.833 0.00 0.00 33.42 0.86
3471 3564 5.050490 GTGAGTGCCAGTACCAAGTATATG 58.950 45.833 0.00 0.00 0.00 1.78
3520 3613 5.820423 TGTACCATATCTGTCAAAATTCCGG 59.180 40.000 0.00 0.00 0.00 5.14
3573 3666 5.279456 GCAATGAGTGTAGTTTTTCCCCATT 60.279 40.000 0.00 0.00 0.00 3.16
3575 3668 4.148838 TGAGTGTAGTTTTTCCCCATTGG 58.851 43.478 0.00 0.00 0.00 3.16
3580 3673 6.612049 AGTGTAGTTTTTCCCCATTGGTTTTA 59.388 34.615 1.20 0.00 34.77 1.52
3709 3802 1.144716 GGATGCTGCATCACCGAGA 59.855 57.895 35.47 0.00 42.13 4.04
3747 3840 0.685097 GCTGAGGTTGGTGTCTGGTA 59.315 55.000 0.00 0.00 0.00 3.25
3819 3912 4.645667 TGATCATAATATTGTCGCACGC 57.354 40.909 0.00 0.00 0.00 5.34
3945 4038 0.397535 ATTTGGAGAATGCCGCCCAT 60.398 50.000 0.00 0.00 33.31 4.00
3980 4073 9.846248 CTTGCAAACTTAGTAAGCAATATCTTT 57.154 29.630 19.46 0.00 43.34 2.52
4133 4345 5.815222 TCGTCCACATATCATTGTTACCTTG 59.185 40.000 0.00 0.00 0.00 3.61
4192 4404 1.134907 CATTTGGAGAATGCTGCCCAC 60.135 52.381 0.00 0.00 0.00 4.61
4331 4543 7.921786 TTCAGAATATCTTGTGGTGGTTAAG 57.078 36.000 0.00 0.00 0.00 1.85
4388 4600 2.168521 GGGGAACAGAGATGACATCGAA 59.831 50.000 9.77 0.00 0.00 3.71
4590 4810 9.512435 CATGTTTAAGATTCAACATCTCATTCC 57.488 33.333 2.84 0.00 40.85 3.01
4645 4865 5.819379 TGTATTCATCAATCCTGCTCTTGTC 59.181 40.000 0.00 0.00 0.00 3.18
4683 4903 3.449018 ACACTAATCGAGGTCAGCTTCAT 59.551 43.478 0.00 0.00 0.00 2.57
4695 4915 5.045286 AGGTCAGCTTCATTTCCAGTTATCT 60.045 40.000 0.00 0.00 0.00 1.98
4696 4916 5.065731 GGTCAGCTTCATTTCCAGTTATCTG 59.934 44.000 0.00 0.00 41.01 2.90
4697 4917 5.877012 GTCAGCTTCATTTCCAGTTATCTGA 59.123 40.000 2.20 0.00 43.76 3.27
4698 4918 5.877012 TCAGCTTCATTTCCAGTTATCTGAC 59.123 40.000 2.20 0.00 43.76 3.51
4699 4919 5.645067 CAGCTTCATTTCCAGTTATCTGACA 59.355 40.000 2.20 0.00 43.76 3.58
4700 4920 6.149973 CAGCTTCATTTCCAGTTATCTGACAA 59.850 38.462 2.20 0.00 43.76 3.18
4728 4948 4.025040 TGTCAATCACCTGATGCTTTCT 57.975 40.909 0.00 0.00 34.49 2.52
4752 4972 9.859427 TCTTGTTGCCATAGAAAATAAAAGATG 57.141 29.630 0.00 0.00 0.00 2.90
4773 4993 9.632638 AAGATGAACATAACTTTATACTGGCAT 57.367 29.630 0.00 0.00 0.00 4.40
4874 5094 3.323729 AAGCATGCATCGTATGTTTCG 57.676 42.857 21.98 0.00 0.00 3.46
4880 5100 3.780902 TGCATCGTATGTTTCGACATCT 58.219 40.909 0.00 0.00 40.07 2.90
4915 5135 6.435430 TTTTGCTATGCACTAGTTATGTGG 57.565 37.500 0.00 0.00 38.71 4.17
4923 5143 5.730550 TGCACTAGTTATGTGGGAAAGTAG 58.269 41.667 0.00 0.00 35.59 2.57
4925 5145 5.811100 GCACTAGTTATGTGGGAAAGTAGAC 59.189 44.000 0.00 0.00 34.25 2.59
4958 5178 2.024176 GTGTGTGGCACTGGTATAGG 57.976 55.000 19.83 0.00 44.41 2.57
4997 5217 4.451150 TGGATCCGCACGACCAGC 62.451 66.667 7.39 0.00 0.00 4.85
5149 5369 2.919043 GGGTGCCGGATCAGGAAT 59.081 61.111 16.86 0.00 0.00 3.01
5194 5414 3.106407 GACGCTGGTGCTGACGAC 61.106 66.667 0.00 0.00 36.97 4.34
5254 5474 4.129737 CGCCTGTCCATCGACGGT 62.130 66.667 0.00 0.00 42.95 4.83
5374 5594 0.321564 CTGGCACGGACAAGAATCCA 60.322 55.000 0.00 0.00 38.87 3.41
5467 5696 1.215655 GCTATGGTGATGACGGACGC 61.216 60.000 0.00 0.00 0.00 5.19
5513 5742 2.203788 AGGAGGTGTTCAGGGCGA 60.204 61.111 0.00 0.00 0.00 5.54
5521 5750 3.467226 TTCAGGGCGATCCGGTCC 61.467 66.667 0.00 0.00 41.52 4.46
5596 5825 2.493973 GAGACGCTCCAGCTCCTG 59.506 66.667 0.00 0.00 39.32 3.86
5601 5830 2.909577 GCTCCAGCTCCTGCAGAT 59.090 61.111 17.39 0.00 42.74 2.90
5626 5855 1.152138 GGTTCCCCCAACCGACTTT 59.848 57.895 0.00 0.00 45.58 2.66
5632 5861 1.890041 CCCAACCGACTTTGACGCA 60.890 57.895 0.00 0.00 0.00 5.24
5710 5939 3.013932 CAGGGGAAGCTCCAGCCT 61.014 66.667 0.00 0.00 43.38 4.58
5865 6094 0.671796 TGCGTCTCCTTCTTCGTCAA 59.328 50.000 0.00 0.00 0.00 3.18
5887 6116 0.408309 ACCCCAAGAAGGTAAAGGCC 59.592 55.000 0.00 0.00 35.24 5.19
5932 6161 9.500785 TCATTACTCACTGACAAATGAACAATA 57.499 29.630 8.10 0.00 34.53 1.90
5943 6172 8.855110 TGACAAATGAACAATACTTACCATTGT 58.145 29.630 0.00 0.00 46.05 2.71
5953 6182 9.174166 ACAATACTTACCATTGTTATCTGAACC 57.826 33.333 0.00 0.00 42.52 3.62
5978 6207 4.525912 ATTTTCTTGATTCCACAGGTGC 57.474 40.909 0.00 0.00 0.00 5.01
6064 6293 1.740380 CGGAACTCAACGAGGATGCAT 60.740 52.381 0.00 0.00 33.35 3.96
6073 6302 1.431488 CGAGGATGCATGTTGTCCCG 61.431 60.000 2.46 1.84 32.31 5.14
6172 6401 5.401376 GCCCTTGTGTTTTTCGTTTTCTATC 59.599 40.000 0.00 0.00 0.00 2.08
6175 6404 6.356190 CCTTGTGTTTTTCGTTTTCTATCGTC 59.644 38.462 0.00 0.00 0.00 4.20
6182 6411 7.712264 TTTTCGTTTTCTATCGTCCAGTTTA 57.288 32.000 0.00 0.00 0.00 2.01
6186 6415 8.314143 TCGTTTTCTATCGTCCAGTTTATTTT 57.686 30.769 0.00 0.00 0.00 1.82
6188 6417 7.691050 CGTTTTCTATCGTCCAGTTTATTTTCC 59.309 37.037 0.00 0.00 0.00 3.13
6189 6418 7.619964 TTTCTATCGTCCAGTTTATTTTCCC 57.380 36.000 0.00 0.00 0.00 3.97
6190 6419 6.302535 TCTATCGTCCAGTTTATTTTCCCA 57.697 37.500 0.00 0.00 0.00 4.37
6222 6451 2.972713 TCCTGTCCAGTGCTCTTTACTT 59.027 45.455 0.00 0.00 0.00 2.24
6250 6479 2.712057 AATGCAAAAGCAGAACTCCG 57.288 45.000 0.00 0.00 0.00 4.63
6252 6481 0.465460 TGCAAAAGCAGAACTCCGGT 60.465 50.000 0.00 0.00 0.00 5.28
6259 6488 1.141053 AGCAGAACTCCGGTTGTTTCT 59.859 47.619 14.59 9.51 35.58 2.52
6355 6590 8.900781 CAGATCAATTAATTGTTGGATCTCTGT 58.099 33.333 23.95 5.15 38.84 3.41
6413 6648 0.392461 CCGTGGGGAACATGTACCTG 60.392 60.000 16.45 8.80 34.14 4.00
6696 6931 2.084610 TGCCGAACATCTTCACTCAG 57.915 50.000 0.00 0.00 0.00 3.35
6781 7016 9.777297 TTTGCTACATATATAATCTTGTGAGCA 57.223 29.630 10.78 10.78 32.32 4.26
6782 7017 8.763049 TGCTACATATATAATCTTGTGAGCAC 57.237 34.615 10.78 0.00 30.81 4.40
6783 7018 8.588472 TGCTACATATATAATCTTGTGAGCACT 58.412 33.333 1.99 0.00 30.81 4.40
6787 7022 8.037758 ACATATATAATCTTGTGAGCACTAGGC 58.962 37.037 11.15 0.00 45.30 3.93
6822 7057 7.463383 CGACTACATCTTGCAGTGAGAAATAAC 60.463 40.741 0.00 0.00 0.00 1.89
7054 7290 7.958088 AGTGCAAAAGCTAAATACCCTAAAAA 58.042 30.769 0.00 0.00 0.00 1.94
7055 7291 8.593679 AGTGCAAAAGCTAAATACCCTAAAAAT 58.406 29.630 0.00 0.00 0.00 1.82
7056 7292 8.655970 GTGCAAAAGCTAAATACCCTAAAAATG 58.344 33.333 0.00 0.00 0.00 2.32
7057 7293 8.589338 TGCAAAAGCTAAATACCCTAAAAATGA 58.411 29.630 0.00 0.00 0.00 2.57
7058 7294 9.599866 GCAAAAGCTAAATACCCTAAAAATGAT 57.400 29.630 0.00 0.00 0.00 2.45
7194 7449 1.466167 CCAGGAGAACATGCAAGAACG 59.534 52.381 0.00 0.00 0.00 3.95
7334 7589 4.770010 AGGATATAGAGCACAAGTCTAGCC 59.230 45.833 0.00 0.00 30.04 3.93
7379 7634 6.839124 TGCCAAATGAAAGTCATGTCTTAT 57.161 33.333 5.62 0.00 37.15 1.73
7409 7664 1.934589 CCCAATACTCGCATTCGTCA 58.065 50.000 0.00 0.00 36.96 4.35
7418 7673 5.545658 ACTCGCATTCGTCATTGTAATTT 57.454 34.783 0.00 0.00 36.96 1.82
7421 7676 6.128282 ACTCGCATTCGTCATTGTAATTTCTT 60.128 34.615 0.00 0.00 36.96 2.52
7477 7732 8.465273 AGAATTGTTTACTCTTAAGTTGCCTT 57.535 30.769 1.63 0.00 36.92 4.35
7482 7737 7.871853 TGTTTACTCTTAAGTTGCCTTCAATC 58.128 34.615 1.63 0.00 36.92 2.67
7483 7738 7.040686 TGTTTACTCTTAAGTTGCCTTCAATCC 60.041 37.037 1.63 0.00 36.92 3.01
7484 7739 4.985538 ACTCTTAAGTTGCCTTCAATCCA 58.014 39.130 1.63 0.00 34.29 3.41
7485 7740 5.385198 ACTCTTAAGTTGCCTTCAATCCAA 58.615 37.500 1.63 0.00 34.29 3.53
7486 7741 5.833131 ACTCTTAAGTTGCCTTCAATCCAAA 59.167 36.000 1.63 0.00 34.29 3.28
7487 7742 6.323739 ACTCTTAAGTTGCCTTCAATCCAAAA 59.676 34.615 1.63 0.00 34.29 2.44
7488 7743 6.748132 TCTTAAGTTGCCTTCAATCCAAAAG 58.252 36.000 1.63 0.00 34.29 2.27
7489 7744 6.549364 TCTTAAGTTGCCTTCAATCCAAAAGA 59.451 34.615 1.63 0.00 34.29 2.52
7490 7745 4.590850 AGTTGCCTTCAATCCAAAAGAC 57.409 40.909 0.00 0.00 34.29 3.01
7491 7746 3.321968 AGTTGCCTTCAATCCAAAAGACC 59.678 43.478 0.00 0.00 34.29 3.85
7492 7747 3.243359 TGCCTTCAATCCAAAAGACCT 57.757 42.857 0.00 0.00 0.00 3.85
7493 7748 3.575805 TGCCTTCAATCCAAAAGACCTT 58.424 40.909 0.00 0.00 0.00 3.50
7494 7749 3.573967 TGCCTTCAATCCAAAAGACCTTC 59.426 43.478 0.00 0.00 0.00 3.46
7495 7750 3.056536 GCCTTCAATCCAAAAGACCTTCC 60.057 47.826 0.00 0.00 0.00 3.46
7496 7751 3.511540 CCTTCAATCCAAAAGACCTTCCC 59.488 47.826 0.00 0.00 0.00 3.97
7497 7752 2.790433 TCAATCCAAAAGACCTTCCCG 58.210 47.619 0.00 0.00 0.00 5.14
7498 7753 1.818674 CAATCCAAAAGACCTTCCCGG 59.181 52.381 0.00 0.00 39.35 5.73
7499 7754 1.368374 ATCCAAAAGACCTTCCCGGA 58.632 50.000 0.73 0.00 36.31 5.14
7500 7755 0.399075 TCCAAAAGACCTTCCCGGAC 59.601 55.000 0.73 0.00 36.31 4.79
7501 7756 0.608308 CCAAAAGACCTTCCCGGACC 60.608 60.000 0.73 0.00 36.31 4.46
7502 7757 0.608308 CAAAAGACCTTCCCGGACCC 60.608 60.000 0.73 0.00 36.31 4.46
7503 7758 1.786407 AAAAGACCTTCCCGGACCCC 61.786 60.000 0.73 0.00 36.31 4.95
7504 7759 4.735599 AGACCTTCCCGGACCCCC 62.736 72.222 0.73 0.00 36.31 5.40
7515 7770 4.139234 GACCCCCGCGTCACCTAC 62.139 72.222 4.92 0.00 32.74 3.18
7519 7774 3.697747 CCCGCGTCACCTACCCAA 61.698 66.667 4.92 0.00 0.00 4.12
7520 7775 2.125673 CCGCGTCACCTACCCAAG 60.126 66.667 4.92 0.00 0.00 3.61
7521 7776 2.813908 CGCGTCACCTACCCAAGC 60.814 66.667 0.00 0.00 0.00 4.01
7522 7777 2.813908 GCGTCACCTACCCAAGCG 60.814 66.667 0.00 0.00 0.00 4.68
7523 7778 2.967397 CGTCACCTACCCAAGCGA 59.033 61.111 0.00 0.00 0.00 4.93
7524 7779 1.445582 CGTCACCTACCCAAGCGAC 60.446 63.158 0.00 0.00 0.00 5.19
7525 7780 1.445582 GTCACCTACCCAAGCGACG 60.446 63.158 0.00 0.00 0.00 5.12
7526 7781 2.813908 CACCTACCCAAGCGACGC 60.814 66.667 13.03 13.03 0.00 5.19
7527 7782 4.430765 ACCTACCCAAGCGACGCG 62.431 66.667 15.18 3.53 0.00 6.01
7528 7783 4.124351 CCTACCCAAGCGACGCGA 62.124 66.667 15.93 0.00 0.00 5.87
7529 7784 2.879462 CTACCCAAGCGACGCGAC 60.879 66.667 15.93 5.54 0.00 5.19
7530 7785 4.424566 TACCCAAGCGACGCGACC 62.425 66.667 15.93 2.61 0.00 4.79
7533 7788 3.777925 CCAAGCGACGCGACCAAG 61.778 66.667 15.93 0.00 0.00 3.61
7534 7789 3.777925 CAAGCGACGCGACCAAGG 61.778 66.667 15.93 0.00 0.00 3.61
7550 7805 4.439901 GGGCTCCCCTTCCCTCCT 62.440 72.222 0.00 0.00 41.34 3.69
7551 7806 2.770475 GGCTCCCCTTCCCTCCTC 60.770 72.222 0.00 0.00 0.00 3.71
7552 7807 2.770475 GCTCCCCTTCCCTCCTCC 60.770 72.222 0.00 0.00 0.00 4.30
7553 7808 3.124088 CTCCCCTTCCCTCCTCCT 58.876 66.667 0.00 0.00 0.00 3.69
7554 7809 1.074850 CTCCCCTTCCCTCCTCCTC 60.075 68.421 0.00 0.00 0.00 3.71
7555 7810 2.040359 CCCCTTCCCTCCTCCTCC 60.040 72.222 0.00 0.00 0.00 4.30
7556 7811 2.040359 CCCTTCCCTCCTCCTCCC 60.040 72.222 0.00 0.00 0.00 4.30
7557 7812 2.787866 CCTTCCCTCCTCCTCCCA 59.212 66.667 0.00 0.00 0.00 4.37
7558 7813 1.383803 CCTTCCCTCCTCCTCCCAG 60.384 68.421 0.00 0.00 0.00 4.45
7559 7814 2.041265 TTCCCTCCTCCTCCCAGC 59.959 66.667 0.00 0.00 0.00 4.85
7560 7815 3.984186 TTCCCTCCTCCTCCCAGCG 62.984 68.421 0.00 0.00 0.00 5.18
7580 7835 4.671033 CCCCCTCCTCCTAATCCC 57.329 66.667 0.00 0.00 0.00 3.85
7581 7836 1.151788 CCCCCTCCTCCTAATCCCC 60.152 68.421 0.00 0.00 0.00 4.81
7582 7837 1.690148 CCCCCTCCTCCTAATCCCCT 61.690 65.000 0.00 0.00 0.00 4.79
7583 7838 0.178888 CCCCTCCTCCTAATCCCCTC 60.179 65.000 0.00 0.00 0.00 4.30
7584 7839 0.178888 CCCTCCTCCTAATCCCCTCC 60.179 65.000 0.00 0.00 0.00 4.30
7585 7840 0.178888 CCTCCTCCTAATCCCCTCCC 60.179 65.000 0.00 0.00 0.00 4.30
7586 7841 0.543174 CTCCTCCTAATCCCCTCCCG 60.543 65.000 0.00 0.00 0.00 5.14
7587 7842 2.217745 CCTCCTAATCCCCTCCCGC 61.218 68.421 0.00 0.00 0.00 6.13
7588 7843 2.122547 TCCTAATCCCCTCCCGCC 60.123 66.667 0.00 0.00 0.00 6.13
7589 7844 3.626924 CCTAATCCCCTCCCGCCG 61.627 72.222 0.00 0.00 0.00 6.46
7590 7845 4.315941 CTAATCCCCTCCCGCCGC 62.316 72.222 0.00 0.00 0.00 6.53
7725 7980 3.882326 CCCAGGCTGGCGATGGAT 61.882 66.667 28.51 0.00 35.79 3.41
7726 7981 2.281345 CCAGGCTGGCGATGGATC 60.281 66.667 22.68 0.00 36.09 3.36
7727 7982 2.281345 CAGGCTGGCGATGGATCC 60.281 66.667 6.61 4.20 0.00 3.36
7728 7983 3.933722 AGGCTGGCGATGGATCCG 61.934 66.667 7.39 0.00 0.00 4.18
7729 7984 4.996434 GGCTGGCGATGGATCCGG 62.996 72.222 7.39 0.00 0.00 5.14
7793 8048 4.170062 CGGTGATGCGGCTGCTTG 62.170 66.667 20.27 0.00 43.34 4.01
7794 8049 3.818787 GGTGATGCGGCTGCTTGG 61.819 66.667 20.27 0.00 43.34 3.61
7795 8050 4.487412 GTGATGCGGCTGCTTGGC 62.487 66.667 20.27 5.84 43.34 4.52
7796 8051 4.728110 TGATGCGGCTGCTTGGCT 62.728 61.111 20.27 0.00 43.34 4.75
7797 8052 4.189188 GATGCGGCTGCTTGGCTG 62.189 66.667 20.27 0.00 43.34 4.85
7843 8098 2.770048 CCCTTCCGGCCCAGATCT 60.770 66.667 0.00 0.00 0.00 2.75
7844 8099 2.507944 CCTTCCGGCCCAGATCTG 59.492 66.667 16.24 16.24 0.00 2.90
7854 8109 2.892025 CCAGATCTGGGCCCTTTTG 58.108 57.895 31.14 12.87 46.81 2.44
7855 8110 0.685458 CCAGATCTGGGCCCTTTTGG 60.685 60.000 31.14 17.87 46.81 3.28
7865 8120 4.039042 CCTTTTGGGCCCCATCTG 57.961 61.111 22.27 5.57 31.53 2.90
7866 8121 1.686800 CCTTTTGGGCCCCATCTGG 60.687 63.158 22.27 11.49 31.53 3.86
7876 8131 3.001514 CCATCTGGGTCTGGGTGG 58.998 66.667 0.00 0.00 0.00 4.61
7877 8132 2.683465 CCATCTGGGTCTGGGTGGG 61.683 68.421 0.00 0.00 0.00 4.61
7878 8133 3.017581 ATCTGGGTCTGGGTGGGC 61.018 66.667 0.00 0.00 0.00 5.36
7900 8155 3.479269 CGTGAGCTTTCCGGCGTC 61.479 66.667 6.01 0.00 37.29 5.19
7901 8156 2.357034 GTGAGCTTTCCGGCGTCA 60.357 61.111 6.01 0.00 37.29 4.35
7902 8157 1.741770 GTGAGCTTTCCGGCGTCAT 60.742 57.895 6.01 0.00 37.29 3.06
7903 8158 1.447838 TGAGCTTTCCGGCGTCATC 60.448 57.895 6.01 0.00 37.29 2.92
7904 8159 1.153549 GAGCTTTCCGGCGTCATCT 60.154 57.895 6.01 0.00 37.29 2.90
7905 8160 1.148759 GAGCTTTCCGGCGTCATCTC 61.149 60.000 6.01 1.96 37.29 2.75
7906 8161 2.174319 GCTTTCCGGCGTCATCTCC 61.174 63.158 6.01 0.00 0.00 3.71
7907 8162 1.878522 CTTTCCGGCGTCATCTCCG 60.879 63.158 6.01 0.00 44.89 4.63
7913 8168 4.508128 GCGTCATCTCCGGCGGAA 62.508 66.667 30.59 20.27 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.764049 GCGACGGAGCGTGACAAC 61.764 66.667 0.00 0.00 41.37 3.32
14 15 1.451567 ATTCTCCTCTCGGACGCGA 60.452 57.895 15.93 0.00 34.92 5.87
23 24 1.135257 CGTTGTCGAGCATTCTCCTCT 60.135 52.381 0.00 0.00 39.71 3.69
35 36 2.024868 CGCATCCAACCGTTGTCGA 61.025 57.895 10.34 1.96 39.71 4.20
50 51 2.307934 TGATTTCGTGATGGATCGCA 57.692 45.000 1.38 0.00 37.15 5.10
51 52 2.159920 CGATGATTTCGTGATGGATCGC 60.160 50.000 0.00 0.00 43.01 4.58
66 67 2.940890 ATTTGGGCGGACGCGATGAT 62.941 55.000 15.93 0.00 43.06 2.45
67 68 3.673956 ATTTGGGCGGACGCGATGA 62.674 57.895 15.93 0.00 43.06 2.92
69 70 3.202001 CATTTGGGCGGACGCGAT 61.202 61.111 15.93 0.00 43.06 4.58
86 87 4.796495 GTGCCGGATCCACCCACC 62.796 72.222 13.41 0.00 34.64 4.61
89 90 4.530857 CTCGTGCCGGATCCACCC 62.531 72.222 13.41 0.00 34.64 4.61
90 91 4.530857 CCTCGTGCCGGATCCACC 62.531 72.222 13.41 1.81 0.00 4.61
101 102 3.414700 GTTGCGACCTGCCTCGTG 61.415 66.667 0.00 0.00 45.60 4.35
132 133 2.811317 CCAGACGAAGCGCACCTC 60.811 66.667 11.47 1.58 0.00 3.85
170 171 2.047655 TAGTGAAGGGGTTGCGCG 60.048 61.111 0.00 0.00 0.00 6.86
174 175 1.298859 GCGCACTAGTGAAGGGGTTG 61.299 60.000 27.08 5.87 0.00 3.77
176 177 2.663196 GCGCACTAGTGAAGGGGT 59.337 61.111 27.08 0.00 0.00 4.95
185 186 1.217585 CCATGTCATCGGCGCACTAG 61.218 60.000 10.83 0.00 0.00 2.57
187 188 2.512286 CCATGTCATCGGCGCACT 60.512 61.111 10.83 0.00 0.00 4.40
197 198 0.986527 AGACACTGATGGCCATGTCA 59.013 50.000 29.72 20.80 43.19 3.58
201 202 0.176680 GACGAGACACTGATGGCCAT 59.823 55.000 20.96 20.96 32.13 4.40
202 203 1.591703 GACGAGACACTGATGGCCA 59.408 57.895 8.56 8.56 32.13 5.36
210 211 1.601197 ACTCAGCGGACGAGACACT 60.601 57.895 0.00 0.00 34.47 3.55
212 213 0.604511 TACACTCAGCGGACGAGACA 60.605 55.000 0.00 0.00 34.47 3.41
216 217 1.807226 CCATACACTCAGCGGACGA 59.193 57.895 0.00 0.00 0.00 4.20
217 218 1.878522 GCCATACACTCAGCGGACG 60.879 63.158 0.00 0.00 0.00 4.79
218 219 1.878522 CGCCATACACTCAGCGGAC 60.879 63.158 0.00 0.00 44.64 4.79
247 248 4.363990 CTGTCTGCCTCGCACGGT 62.364 66.667 0.00 0.00 33.79 4.83
261 262 3.112075 CACGACATTCCGCGCTGT 61.112 61.111 5.56 1.90 0.00 4.40
262 263 3.853330 CCACGACATTCCGCGCTG 61.853 66.667 5.56 0.00 0.00 5.18
265 266 3.853330 CTGCCACGACATTCCGCG 61.853 66.667 0.00 0.00 0.00 6.46
268 269 0.741221 GAGGACTGCCACGACATTCC 60.741 60.000 0.00 0.00 39.15 3.01
277 278 4.056125 CTGTCGCGAGGACTGCCA 62.056 66.667 10.24 0.07 46.24 4.92
284 285 1.797933 CTCAACGTCTGTCGCGAGG 60.798 63.158 10.24 5.76 44.19 4.63
287 288 1.797933 CTCCTCAACGTCTGTCGCG 60.798 63.158 0.00 0.00 44.19 5.87
291 292 2.651361 CGCCTCCTCAACGTCTGT 59.349 61.111 0.00 0.00 0.00 3.41
297 298 2.035442 GCAACTCCGCCTCCTCAAC 61.035 63.158 0.00 0.00 0.00 3.18
299 300 2.922503 TGCAACTCCGCCTCCTCA 60.923 61.111 0.00 0.00 0.00 3.86
313 314 4.074526 GAGGCGCCAGAGAGTGCA 62.075 66.667 31.54 0.00 45.18 4.57
358 359 2.202171 CGAACATGACGCGGTTGC 60.202 61.111 12.47 0.00 37.91 4.17
359 360 1.129809 GTCGAACATGACGCGGTTG 59.870 57.895 12.47 7.40 0.00 3.77
360 361 3.545911 GTCGAACATGACGCGGTT 58.454 55.556 12.47 4.29 0.00 4.44
372 373 2.620112 GGTCGGAGGTCACGTCGAA 61.620 63.158 0.00 0.00 33.33 3.71
374 375 2.697761 ATGGTCGGAGGTCACGTCG 61.698 63.158 0.00 0.00 0.00 5.12
375 376 1.153823 CATGGTCGGAGGTCACGTC 60.154 63.158 0.00 0.00 0.00 4.34
381 382 1.482593 GAATCTGTCATGGTCGGAGGT 59.517 52.381 0.00 0.00 0.00 3.85
402 403 0.672711 GTAGAAGTGGGGCCGACAAC 60.673 60.000 21.26 13.32 0.00 3.32
404 405 1.229082 AGTAGAAGTGGGGCCGACA 60.229 57.895 21.26 0.00 0.00 4.35
408 409 0.036294 GTGTCAGTAGAAGTGGGGCC 60.036 60.000 0.00 0.00 0.00 5.80
409 410 0.977395 AGTGTCAGTAGAAGTGGGGC 59.023 55.000 0.00 0.00 0.00 5.80
412 413 4.302455 CTTCACAGTGTCAGTAGAAGTGG 58.698 47.826 10.63 0.00 0.00 4.00
416 417 2.965831 AGCCTTCACAGTGTCAGTAGAA 59.034 45.455 0.00 0.00 0.00 2.10
419 420 1.618837 GGAGCCTTCACAGTGTCAGTA 59.381 52.381 0.00 0.00 0.00 2.74
422 423 0.394192 CTGGAGCCTTCACAGTGTCA 59.606 55.000 0.00 0.00 0.00 3.58
428 429 1.561643 CCTACTCTGGAGCCTTCACA 58.438 55.000 0.00 0.00 0.00 3.58
431 432 1.051556 CCCCCTACTCTGGAGCCTTC 61.052 65.000 0.00 0.00 0.00 3.46
440 441 1.133730 GTCGATGTCTCCCCCTACTCT 60.134 57.143 0.00 0.00 0.00 3.24
443 444 1.320507 GAGTCGATGTCTCCCCCTAC 58.679 60.000 0.00 0.00 0.00 3.18
445 446 1.075896 GGAGTCGATGTCTCCCCCT 60.076 63.158 8.98 0.00 43.90 4.79
446 447 3.539842 GGAGTCGATGTCTCCCCC 58.460 66.667 8.98 0.00 43.90 5.40
464 484 0.107800 CACCTGCTCATGGGACTCAG 60.108 60.000 0.00 0.00 0.00 3.35
473 493 0.536724 TATGACGCACACCTGCTCAT 59.463 50.000 10.44 10.44 41.77 2.90
479 499 2.623889 GAGTAGGATATGACGCACACCT 59.376 50.000 0.00 0.00 0.00 4.00
483 503 4.073549 AGGTAGAGTAGGATATGACGCAC 58.926 47.826 0.00 0.00 0.00 5.34
484 504 4.325119 GAGGTAGAGTAGGATATGACGCA 58.675 47.826 0.00 0.00 0.00 5.24
486 506 3.371591 GCGAGGTAGAGTAGGATATGACG 59.628 52.174 0.00 0.00 0.00 4.35
506 528 2.125552 TTGCTCCGATCACCAGCG 60.126 61.111 0.00 0.00 35.81 5.18
511 533 2.143122 TCAAAGTGTTGCTCCGATCAC 58.857 47.619 0.00 0.00 34.50 3.06
512 534 2.416747 CTCAAAGTGTTGCTCCGATCA 58.583 47.619 0.00 0.00 34.50 2.92
515 537 0.250295 CCCTCAAAGTGTTGCTCCGA 60.250 55.000 0.00 0.00 34.50 4.55
544 566 3.771160 GAGTCCATGTCCGGCGGT 61.771 66.667 27.32 3.11 0.00 5.68
547 569 3.771160 ACCGAGTCCATGTCCGGC 61.771 66.667 0.00 0.00 45.29 6.13
563 585 2.035442 GGAGCTTGTCCGGCTTCAC 61.035 63.158 0.00 0.00 40.40 3.18
575 597 6.657541 TGTAAAATCTAATCCAAACGGAGCTT 59.342 34.615 0.00 0.00 35.52 3.74
579 601 6.183360 GCCATGTAAAATCTAATCCAAACGGA 60.183 38.462 0.00 0.00 36.85 4.69
593 615 8.976353 TCCATACAATTACTTGCCATGTAAAAT 58.024 29.630 7.20 0.00 35.69 1.82
600 622 7.201938 CCTCAAATCCATACAATTACTTGCCAT 60.202 37.037 0.00 0.00 35.69 4.40
602 624 6.096846 ACCTCAAATCCATACAATTACTTGCC 59.903 38.462 0.00 0.00 35.69 4.52
606 628 8.960591 CAGAAACCTCAAATCCATACAATTACT 58.039 33.333 0.00 0.00 0.00 2.24
608 630 9.527157 TTCAGAAACCTCAAATCCATACAATTA 57.473 29.630 0.00 0.00 0.00 1.40
616 638 7.010160 ACCTTAATTCAGAAACCTCAAATCCA 58.990 34.615 0.00 0.00 0.00 3.41
653 675 9.745880 CCTATTAACGCAACTAATCTCTTTCTA 57.254 33.333 0.00 0.00 0.00 2.10
654 676 8.258708 ACCTATTAACGCAACTAATCTCTTTCT 58.741 33.333 0.00 0.00 0.00 2.52
666 688 3.181527 GGACAACGACCTATTAACGCAAC 60.182 47.826 0.00 0.00 0.00 4.17
690 714 4.216902 CACATTCAACTCCTCAAATGCTCA 59.783 41.667 0.00 0.00 33.42 4.26
692 716 3.508793 CCACATTCAACTCCTCAAATGCT 59.491 43.478 0.00 0.00 33.42 3.79
703 727 2.939640 GCCGGATACACCACATTCAACT 60.940 50.000 5.05 0.00 38.90 3.16
705 729 1.280710 AGCCGGATACACCACATTCAA 59.719 47.619 5.05 0.00 38.90 2.69
729 754 6.820656 TGAGGAAACAAATTAGAGAGAGCATC 59.179 38.462 0.00 0.00 0.00 3.91
730 755 6.715280 TGAGGAAACAAATTAGAGAGAGCAT 58.285 36.000 0.00 0.00 0.00 3.79
731 756 6.114187 TGAGGAAACAAATTAGAGAGAGCA 57.886 37.500 0.00 0.00 0.00 4.26
732 757 6.401581 CGTTGAGGAAACAAATTAGAGAGAGC 60.402 42.308 0.00 0.00 38.84 4.09
733 758 6.091441 CCGTTGAGGAAACAAATTAGAGAGAG 59.909 42.308 0.00 0.00 45.00 3.20
734 759 5.932303 CCGTTGAGGAAACAAATTAGAGAGA 59.068 40.000 0.00 0.00 45.00 3.10
735 760 5.122396 CCCGTTGAGGAAACAAATTAGAGAG 59.878 44.000 0.00 0.00 45.00 3.20
736 761 5.001232 CCCGTTGAGGAAACAAATTAGAGA 58.999 41.667 0.00 0.00 45.00 3.10
737 762 4.379499 GCCCGTTGAGGAAACAAATTAGAG 60.379 45.833 0.00 0.00 45.00 2.43
738 763 3.504520 GCCCGTTGAGGAAACAAATTAGA 59.495 43.478 0.00 0.00 45.00 2.10
746 771 2.258726 AAGCGCCCGTTGAGGAAAC 61.259 57.895 2.29 0.00 45.00 2.78
783 809 9.893305 TTTCTCGAGAAAAGGAAATATTGTTTC 57.107 29.630 32.77 0.00 40.68 2.78
808 834 3.507233 TGGAGAGTACGTATGTTCGGTTT 59.493 43.478 0.00 0.00 34.94 3.27
811 837 2.538333 CGTGGAGAGTACGTATGTTCGG 60.538 54.545 0.00 0.00 36.83 4.30
820 846 2.202440 CGCCACGTGGAGAGTACG 60.202 66.667 38.30 25.21 46.31 3.67
821 847 2.181021 CCGCCACGTGGAGAGTAC 59.819 66.667 38.30 17.72 37.14 2.73
822 848 3.066190 CCCGCCACGTGGAGAGTA 61.066 66.667 38.30 0.00 37.14 2.59
861 896 0.105709 GGAAGGAGAGGGGAGGAGAG 60.106 65.000 0.00 0.00 0.00 3.20
862 897 1.939082 CGGAAGGAGAGGGGAGGAGA 61.939 65.000 0.00 0.00 0.00 3.71
863 898 1.456705 CGGAAGGAGAGGGGAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
864 899 2.690452 CGGAAGGAGAGGGGAGGA 59.310 66.667 0.00 0.00 0.00 3.71
865 900 3.157949 GCGGAAGGAGAGGGGAGG 61.158 72.222 0.00 0.00 0.00 4.30
866 901 1.341156 ATTGCGGAAGGAGAGGGGAG 61.341 60.000 0.00 0.00 0.00 4.30
867 902 1.306997 ATTGCGGAAGGAGAGGGGA 60.307 57.895 0.00 0.00 0.00 4.81
868 903 1.153086 CATTGCGGAAGGAGAGGGG 60.153 63.158 0.00 0.00 0.00 4.79
869 904 1.153086 CCATTGCGGAAGGAGAGGG 60.153 63.158 1.86 0.00 36.56 4.30
870 905 1.907739 TCCATTGCGGAAGGAGAGG 59.092 57.895 1.86 0.00 42.52 3.69
991 1026 4.039730 TGGAACTGTCAAGAGAGAGAAAGG 59.960 45.833 0.83 0.00 37.33 3.11
1017 1052 3.470888 CCGTTGGGCGAGAGGGAT 61.471 66.667 0.00 0.00 44.77 3.85
1060 1096 2.152016 TGTGTGTGTTTGTTCCGTTGA 58.848 42.857 0.00 0.00 0.00 3.18
1071 1107 1.791103 CGGCCCGATTTGTGTGTGTT 61.791 55.000 0.00 0.00 0.00 3.32
1074 1110 3.361977 GCGGCCCGATTTGTGTGT 61.362 61.111 7.68 0.00 0.00 3.72
1133 1169 1.887198 AGTATCGCCTCAAGGTATCCG 59.113 52.381 0.00 0.00 37.57 4.18
1151 1187 4.702081 GACGCACCGCTGTCGAGT 62.702 66.667 7.00 0.00 38.10 4.18
1231 1273 2.522436 ACGACTTCGGGTCACCCA 60.522 61.111 15.17 0.00 45.83 4.51
1331 1373 2.290287 CCATGTCCGGTGGAGGTCA 61.290 63.158 3.44 0.00 39.12 4.02
1385 1427 4.135153 TTCTCGAGGCGGCTGCTC 62.135 66.667 19.63 11.82 42.25 4.26
1505 1549 5.545063 AACGAAAAATCAACAAGGGGATT 57.455 34.783 0.00 0.00 35.34 3.01
1522 1566 2.475852 CGACGAAACCAACCAAAACGAA 60.476 45.455 0.00 0.00 0.00 3.85
1610 1701 3.070159 ACGTCGATCCCTTTCATCATCAT 59.930 43.478 0.00 0.00 0.00 2.45
1623 1714 7.487629 TGGAAACATCTCGATACGTCGATCC 62.488 48.000 0.00 0.00 45.98 3.36
1693 1784 2.167662 CCTACGGCCTGATTTGGTTTT 58.832 47.619 0.00 0.00 0.00 2.43
1730 1821 2.757508 TCCCTCAGAGGCGCAGAG 60.758 66.667 11.57 10.49 32.73 3.35
1731 1822 2.757508 CTCCCTCAGAGGCGCAGA 60.758 66.667 11.57 1.91 39.13 4.26
1738 1829 1.840737 TCTCGAAACCTCCCTCAGAG 58.159 55.000 0.00 0.00 42.83 3.35
1739 1830 2.304221 TTCTCGAAACCTCCCTCAGA 57.696 50.000 0.00 0.00 0.00 3.27
1740 1831 3.055819 TGAATTCTCGAAACCTCCCTCAG 60.056 47.826 7.05 0.00 0.00 3.35
1741 1832 2.903784 TGAATTCTCGAAACCTCCCTCA 59.096 45.455 7.05 0.00 0.00 3.86
1742 1833 3.055747 ACTGAATTCTCGAAACCTCCCTC 60.056 47.826 7.05 0.00 0.00 4.30
1743 1834 2.907042 ACTGAATTCTCGAAACCTCCCT 59.093 45.455 7.05 0.00 0.00 4.20
1744 1835 3.336138 ACTGAATTCTCGAAACCTCCC 57.664 47.619 7.05 0.00 0.00 4.30
1745 1836 5.074584 AGTACTGAATTCTCGAAACCTCC 57.925 43.478 7.05 0.00 0.00 4.30
1772 1863 5.011431 TGTGTGTTTGTCTCTGAGATCATCT 59.989 40.000 11.07 0.00 0.00 2.90
1773 1864 5.119898 GTGTGTGTTTGTCTCTGAGATCATC 59.880 44.000 11.07 0.00 0.00 2.92
1774 1865 4.993584 GTGTGTGTTTGTCTCTGAGATCAT 59.006 41.667 11.07 0.00 0.00 2.45
1775 1866 4.371786 GTGTGTGTTTGTCTCTGAGATCA 58.628 43.478 11.07 8.08 0.00 2.92
1776 1867 3.426859 CGTGTGTGTTTGTCTCTGAGATC 59.573 47.826 11.07 5.59 0.00 2.75
1777 1868 3.068165 TCGTGTGTGTTTGTCTCTGAGAT 59.932 43.478 11.07 0.00 0.00 2.75
1799 1890 9.836864 GGGCCAAGAATAAAATAAAATGAAGAT 57.163 29.630 4.39 0.00 0.00 2.40
1856 1948 1.469703 TGCAGAAACGATCAGCAATGG 59.530 47.619 9.70 0.00 46.20 3.16
1857 1949 2.905959 TGCAGAAACGATCAGCAATG 57.094 45.000 9.70 0.00 46.20 2.82
1885 1977 7.171678 ACCGTAATTCTCTTTCTCTTTTCACAG 59.828 37.037 0.00 0.00 0.00 3.66
1901 1993 2.416972 GGCACGAGAAGACCGTAATTCT 60.417 50.000 0.00 0.00 38.29 2.40
1910 2002 0.601558 TACTGGTGGCACGAGAAGAC 59.398 55.000 32.21 8.65 0.00 3.01
1924 2016 3.316308 GCCAACTTATCAGCCATTACTGG 59.684 47.826 0.00 0.00 46.17 4.00
1960 2052 4.292186 TCAGTTGAGAGAAAATGGGAGG 57.708 45.455 0.00 0.00 0.00 4.30
1979 2071 3.254629 GCAGATGCAGTTCCCTTCA 57.745 52.632 0.00 0.00 41.59 3.02
2025 2117 3.127030 GCAATTCCTAGTGTTTTCCGGAG 59.873 47.826 3.34 0.00 0.00 4.63
2026 2118 3.078837 GCAATTCCTAGTGTTTTCCGGA 58.921 45.455 0.00 0.00 0.00 5.14
2070 2162 5.551233 TCCTGTACAGACTCATTCCAAAAG 58.449 41.667 24.68 2.18 0.00 2.27
2075 2167 3.192844 TCGTTCCTGTACAGACTCATTCC 59.807 47.826 24.68 2.44 0.00 3.01
2119 2211 8.443953 AAAACTGCAAATGCCTTATGTTTTTA 57.556 26.923 2.46 0.00 41.18 1.52
2127 2219 7.095271 GCAAGAAATAAAACTGCAAATGCCTTA 60.095 33.333 2.46 0.00 41.18 2.69
2133 2225 6.523840 TCTGGCAAGAAATAAAACTGCAAAT 58.476 32.000 0.00 0.00 0.00 2.32
2142 2234 8.635765 AATACTCTGTTCTGGCAAGAAATAAA 57.364 30.769 4.73 0.00 44.01 1.40
2156 2248 7.814587 CCAAATCCAAAAGGAAATACTCTGTTC 59.185 37.037 0.00 0.00 0.00 3.18
2203 2295 0.318120 CCATGCCACACCAAAAGGAC 59.682 55.000 0.00 0.00 0.00 3.85
2219 2311 3.346315 TGCTCGTCATCAAACAATCCAT 58.654 40.909 0.00 0.00 0.00 3.41
2223 2315 2.161012 CAGCTGCTCGTCATCAAACAAT 59.839 45.455 0.00 0.00 0.00 2.71
2247 2339 1.600058 TCCTCTGGATGCCCTCAATT 58.400 50.000 0.00 0.00 0.00 2.32
2283 2375 2.266055 CGGACCTGCTCCTGTTCC 59.734 66.667 0.00 0.00 36.80 3.62
2492 2584 1.810151 GAATTGGTTAACCGAGCTGCA 59.190 47.619 19.44 0.00 39.43 4.41
2493 2585 1.132453 GGAATTGGTTAACCGAGCTGC 59.868 52.381 19.44 10.82 39.43 5.25
2517 2609 5.704515 GGTCACGCAGTATAGGATAGAAGTA 59.295 44.000 0.00 0.00 41.61 2.24
2536 2628 0.881118 ATCAACATGGCAACGGTCAC 59.119 50.000 0.00 0.00 42.51 3.67
2542 2634 1.535028 TCACGACATCAACATGGCAAC 59.465 47.619 0.00 0.00 38.04 4.17
2565 2657 8.594687 CAACCAAGATGACAAAAGTTGTAAAAG 58.405 33.333 0.00 0.00 45.52 2.27
2574 2666 4.046462 CACTGCAACCAAGATGACAAAAG 58.954 43.478 0.00 0.00 0.00 2.27
2702 2794 7.406031 AGTCAATGCAAATCTTGATCTTGAT 57.594 32.000 3.92 0.00 34.18 2.57
2703 2795 6.829229 AGTCAATGCAAATCTTGATCTTGA 57.171 33.333 3.92 0.00 34.18 3.02
2704 2796 9.020813 CATAAGTCAATGCAAATCTTGATCTTG 57.979 33.333 16.92 5.08 34.18 3.02
2705 2797 8.195436 CCATAAGTCAATGCAAATCTTGATCTT 58.805 33.333 3.92 10.53 34.18 2.40
2706 2798 7.683704 GCCATAAGTCAATGCAAATCTTGATCT 60.684 37.037 3.92 1.71 34.18 2.75
2707 2799 6.420008 GCCATAAGTCAATGCAAATCTTGATC 59.580 38.462 3.92 0.00 34.18 2.92
2746 2838 7.961351 TCCACAACATATTTCACCTGAAAAAT 58.039 30.769 4.61 0.00 45.81 1.82
2799 2891 3.074094 ACAGGTCTACTCTGTACACTCCA 59.926 47.826 0.00 0.00 42.91 3.86
3015 3107 3.866379 AATGTGCGCAAGGGCTCCA 62.866 57.895 14.00 3.88 38.10 3.86
3147 3239 2.436469 ATCGGCACATTCAGCGCA 60.436 55.556 11.47 0.00 0.00 6.09
3151 3243 1.028330 AGCACCATCGGCACATTCAG 61.028 55.000 0.00 0.00 0.00 3.02
3222 3314 0.614697 TCTCCTCCTTGGACATGCGA 60.615 55.000 0.00 0.00 40.56 5.10
3243 3335 3.056179 TCATGATCTTGTAGGTTGCGTCA 60.056 43.478 8.33 0.00 0.00 4.35
3297 3389 2.079158 GTAATCACAAGCTCTGCTGCA 58.921 47.619 0.88 0.88 39.62 4.41
3402 3494 4.749310 CAGCTGAGCCCGCGTCTT 62.749 66.667 8.42 0.00 0.00 3.01
3520 3613 2.352715 GCCACCTCAAATACCAACTTGC 60.353 50.000 0.00 0.00 0.00 4.01
3573 3666 7.967854 CAGATCGAATTAGCACAAATAAAACCA 59.032 33.333 0.00 0.00 0.00 3.67
3575 3668 7.698130 AGCAGATCGAATTAGCACAAATAAAAC 59.302 33.333 0.00 0.00 0.00 2.43
3580 3673 5.587844 AGAAGCAGATCGAATTAGCACAAAT 59.412 36.000 0.00 0.00 0.00 2.32
3747 3840 9.715121 GATTTGGATATGCATATGAAATTTGGT 57.285 29.630 23.76 7.12 0.00 3.67
3819 3912 0.603707 ATCACCTGTGGCACGAGTTG 60.604 55.000 13.77 10.19 0.00 3.16
3945 4038 4.532834 ACTAAGTTTGCAAGTTCCCTCAA 58.467 39.130 0.00 0.00 0.00 3.02
3980 4073 2.715336 AGTAGGCCGTCTATAAGGAGGA 59.285 50.000 0.00 0.00 0.00 3.71
4111 4323 7.498900 TCATCAAGGTAACAATGATATGTGGAC 59.501 37.037 0.00 0.00 41.68 4.02
4180 4392 3.915575 CCTCAGTGGGCAGCATTC 58.084 61.111 0.00 0.00 0.00 2.67
4192 4404 4.137543 ACTAAGTTTGCAAGTTCCCTCAG 58.862 43.478 0.00 0.00 0.00 3.35
4331 4543 9.696917 ACCTGAAAACAGATGATGTAAATTTTC 57.303 29.630 0.00 0.00 43.00 2.29
4590 4810 4.011058 GGATAACCAATGTTTTCCGTCG 57.989 45.455 0.31 0.00 40.97 5.12
4683 4903 7.448161 ACATTGTCATTGTCAGATAACTGGAAA 59.552 33.333 0.00 0.00 43.60 3.13
4696 4916 5.181811 TCAGGTGATTGACATTGTCATTGTC 59.818 40.000 19.63 17.27 42.40 3.18
4697 4917 5.072055 TCAGGTGATTGACATTGTCATTGT 58.928 37.500 19.63 9.48 42.40 2.71
4698 4918 5.632244 TCAGGTGATTGACATTGTCATTG 57.368 39.130 19.63 11.31 42.40 2.82
4699 4919 5.393787 GCATCAGGTGATTGACATTGTCATT 60.394 40.000 19.63 15.93 42.40 2.57
4700 4920 4.097437 GCATCAGGTGATTGACATTGTCAT 59.903 41.667 19.63 10.24 42.40 3.06
4803 5023 3.823330 GTGGCGACGATCGGGAGT 61.823 66.667 20.98 0.00 40.84 3.85
4963 5183 0.250901 CCACTAGCAGCCCACTGTTT 60.251 55.000 0.00 0.00 46.30 2.83
5358 5578 1.648467 GGCTGGATTCTTGTCCGTGC 61.648 60.000 0.00 0.00 41.35 5.34
5392 5621 1.019805 GCAGGAGCGGGTACTTGTTC 61.020 60.000 0.00 0.00 0.00 3.18
5431 5660 2.889617 CAGTCCACGGCCACGATA 59.110 61.111 2.24 0.00 44.60 2.92
5467 5696 0.455633 GCAACATCTTCTTGCTGGCG 60.456 55.000 0.00 0.00 40.79 5.69
5596 5825 4.666105 GGAACCTTCCCCATCTGC 57.334 61.111 0.00 0.00 41.62 4.26
5632 5861 1.257750 TGCCACTACCGCAGATGAGT 61.258 55.000 0.00 0.00 0.00 3.41
5677 5906 1.303888 CTGGGCATCCAAGCACTGT 60.304 57.895 0.00 0.00 43.51 3.55
5845 6074 0.671796 TGACGAAGAAGGAGACGCAA 59.328 50.000 0.00 0.00 0.00 4.85
5865 6094 1.993301 CCTTTACCTTCTTGGGGTCCT 59.007 52.381 0.00 0.00 41.11 3.85
5887 6116 9.512588 AGTAATGAAAGATAAAGATATGCAGGG 57.487 33.333 0.00 0.00 0.00 4.45
5932 6161 7.016153 TCAGGTTCAGATAACAATGGTAAGT 57.984 36.000 0.00 0.00 0.00 2.24
5947 6176 6.865205 GTGGAATCAAGAAAATTCAGGTTCAG 59.135 38.462 11.28 0.00 35.30 3.02
5953 6182 6.154445 CACCTGTGGAATCAAGAAAATTCAG 58.846 40.000 0.00 0.00 35.30 3.02
5978 6207 2.245942 CCGCATCTCATCGATAGTTCG 58.754 52.381 0.00 0.00 46.87 3.95
6064 6293 2.359850 GCCATGAGCGGGACAACA 60.360 61.111 0.00 0.00 0.00 3.33
6073 6302 0.737219 GTGACCTTGATGCCATGAGC 59.263 55.000 0.00 0.00 44.14 4.26
6111 6340 3.919804 GCTTCGCTCAATAAAACAATGCA 59.080 39.130 0.00 0.00 0.00 3.96
6134 6363 2.240667 ACAAGGGCTACAGCAGAATGAT 59.759 45.455 3.24 0.00 44.36 2.45
6138 6367 0.764890 ACACAAGGGCTACAGCAGAA 59.235 50.000 3.24 0.00 44.36 3.02
6172 6401 5.385509 ACAATGGGAAAATAAACTGGACG 57.614 39.130 0.00 0.00 0.00 4.79
6175 6404 8.150296 AGAGAAAACAATGGGAAAATAAACTGG 58.850 33.333 0.00 0.00 0.00 4.00
6182 6411 5.840693 ACAGGAGAGAAAACAATGGGAAAAT 59.159 36.000 0.00 0.00 0.00 1.82
6186 6415 3.244911 GGACAGGAGAGAAAACAATGGGA 60.245 47.826 0.00 0.00 0.00 4.37
6188 6417 3.754965 TGGACAGGAGAGAAAACAATGG 58.245 45.455 0.00 0.00 0.00 3.16
6189 6418 4.214971 CACTGGACAGGAGAGAAAACAATG 59.785 45.833 4.14 0.00 0.00 2.82
6190 6419 4.392940 CACTGGACAGGAGAGAAAACAAT 58.607 43.478 4.14 0.00 0.00 2.71
6250 6479 4.672409 CACTCTTTTGACCAGAAACAACC 58.328 43.478 0.00 0.00 0.00 3.77
6252 6481 4.016444 AGCACTCTTTTGACCAGAAACAA 58.984 39.130 0.00 0.00 0.00 2.83
6259 6488 1.985473 ATGCAGCACTCTTTTGACCA 58.015 45.000 0.00 0.00 0.00 4.02
6322 6557 8.801299 TCCAACAATTAATTGATCTGCTTGTTA 58.199 29.630 30.18 12.63 40.14 2.41
6331 6566 8.066595 CGACAGAGATCCAACAATTAATTGATC 58.933 37.037 30.18 21.75 40.14 2.92
6355 6590 3.367646 AGAGGTACCTGAGATTGTCGA 57.632 47.619 22.10 0.00 0.00 4.20
6401 6636 1.134788 CCGAGGACCAGGTACATGTTC 60.135 57.143 2.30 1.13 0.00 3.18
6413 6648 2.590092 CCATGTTCCCCGAGGACC 59.410 66.667 0.00 0.00 43.90 4.46
6696 6931 8.840321 TGAACAAGCAGAAGATATTAAATAGCC 58.160 33.333 0.00 0.00 0.00 3.93
6780 7015 0.179134 GTCGTGCTAGTGGCCTAGTG 60.179 60.000 3.32 0.00 42.35 2.74
6781 7016 0.323542 AGTCGTGCTAGTGGCCTAGT 60.324 55.000 3.32 0.00 42.35 2.57
6782 7017 1.334243 GTAGTCGTGCTAGTGGCCTAG 59.666 57.143 3.32 0.00 43.09 3.02
6783 7018 1.340308 TGTAGTCGTGCTAGTGGCCTA 60.340 52.381 3.32 0.00 40.92 3.93
6784 7019 0.611062 TGTAGTCGTGCTAGTGGCCT 60.611 55.000 3.32 0.00 40.92 5.19
6785 7020 0.460311 ATGTAGTCGTGCTAGTGGCC 59.540 55.000 0.00 0.00 40.92 5.36
6786 7021 1.405821 AGATGTAGTCGTGCTAGTGGC 59.594 52.381 0.00 0.00 42.22 5.01
6787 7022 3.439293 CAAGATGTAGTCGTGCTAGTGG 58.561 50.000 0.00 0.00 29.74 4.00
6822 7057 2.871022 GGCATCATCAGCAGTGTCTTAG 59.129 50.000 0.00 0.00 0.00 2.18
7054 7290 2.630098 AGCACGTGATGGCTAGTATCAT 59.370 45.455 22.23 5.41 38.90 2.45
7055 7291 2.031870 AGCACGTGATGGCTAGTATCA 58.968 47.619 22.23 7.47 38.90 2.15
7056 7292 2.294791 AGAGCACGTGATGGCTAGTATC 59.705 50.000 22.23 0.00 41.22 2.24
7057 7293 2.311463 AGAGCACGTGATGGCTAGTAT 58.689 47.619 22.23 0.00 41.22 2.12
7058 7294 1.763968 AGAGCACGTGATGGCTAGTA 58.236 50.000 22.23 0.00 41.22 1.82
7059 7295 0.898320 AAGAGCACGTGATGGCTAGT 59.102 50.000 22.23 0.00 41.22 2.57
7060 7296 2.871182 TAAGAGCACGTGATGGCTAG 57.129 50.000 22.23 0.00 41.22 3.42
7061 7297 3.457234 CAATAAGAGCACGTGATGGCTA 58.543 45.455 22.23 4.06 41.22 3.93
7062 7298 2.283298 CAATAAGAGCACGTGATGGCT 58.717 47.619 22.23 9.14 44.48 4.75
7063 7299 1.331756 CCAATAAGAGCACGTGATGGC 59.668 52.381 22.23 3.01 0.00 4.40
7265 7520 7.229506 CCCATCAATAATAAGTGGAGTTTCCTC 59.770 40.741 0.00 0.00 37.46 3.71
7334 7589 2.290367 TGGTTTCATCTGCAGTTTCGTG 59.710 45.455 14.67 6.55 0.00 4.35
7379 7634 2.693591 CGAGTATTGGGCTCCTCTGTTA 59.306 50.000 0.00 0.00 0.00 2.41
7418 7673 9.350357 GTTACTACTCATCGTGACAAATTAAGA 57.650 33.333 0.00 0.00 0.00 2.10
7421 7676 7.529158 TCGTTACTACTCATCGTGACAAATTA 58.471 34.615 0.00 0.00 0.00 1.40
7431 7686 9.666626 AATTCTTATCTTCGTTACTACTCATCG 57.333 33.333 0.00 0.00 0.00 3.84
7477 7732 2.554344 CCGGGAAGGTCTTTTGGATTGA 60.554 50.000 0.00 0.00 34.51 2.57
7482 7737 0.608308 GGTCCGGGAAGGTCTTTTGG 60.608 60.000 0.00 0.00 41.99 3.28
7483 7738 0.608308 GGGTCCGGGAAGGTCTTTTG 60.608 60.000 0.00 0.00 41.99 2.44
7484 7739 1.765727 GGGTCCGGGAAGGTCTTTT 59.234 57.895 0.00 0.00 41.99 2.27
7485 7740 2.229203 GGGGTCCGGGAAGGTCTTT 61.229 63.158 0.00 0.00 41.99 2.52
7486 7741 2.609921 GGGGTCCGGGAAGGTCTT 60.610 66.667 0.00 0.00 41.99 3.01
7487 7742 4.735599 GGGGGTCCGGGAAGGTCT 62.736 72.222 0.00 0.00 41.99 3.85
7498 7753 4.139234 GTAGGTGACGCGGGGGTC 62.139 72.222 12.47 8.75 37.45 4.46
7502 7757 3.659089 CTTGGGTAGGTGACGCGGG 62.659 68.421 12.47 0.00 43.88 6.13
7503 7758 2.125673 CTTGGGTAGGTGACGCGG 60.126 66.667 12.47 0.00 43.88 6.46
7504 7759 2.813908 GCTTGGGTAGGTGACGCG 60.814 66.667 3.53 3.53 43.88 6.01
7505 7760 2.813908 CGCTTGGGTAGGTGACGC 60.814 66.667 0.00 0.00 41.35 5.19
7506 7761 1.445582 GTCGCTTGGGTAGGTGACG 60.446 63.158 0.00 0.00 34.15 4.35
7507 7762 1.445582 CGTCGCTTGGGTAGGTGAC 60.446 63.158 0.00 0.00 38.94 3.67
7508 7763 2.967397 CGTCGCTTGGGTAGGTGA 59.033 61.111 0.00 0.00 0.00 4.02
7509 7764 2.813908 GCGTCGCTTGGGTAGGTG 60.814 66.667 10.68 0.00 0.00 4.00
7510 7765 4.430765 CGCGTCGCTTGGGTAGGT 62.431 66.667 16.36 0.00 0.00 3.08
7511 7766 4.124351 TCGCGTCGCTTGGGTAGG 62.124 66.667 16.36 0.00 0.00 3.18
7512 7767 2.879462 GTCGCGTCGCTTGGGTAG 60.879 66.667 16.36 0.00 0.00 3.18
7513 7768 4.424566 GGTCGCGTCGCTTGGGTA 62.425 66.667 16.36 0.00 0.00 3.69
7516 7771 3.777925 CTTGGTCGCGTCGCTTGG 61.778 66.667 16.36 0.00 0.00 3.61
7517 7772 3.777925 CCTTGGTCGCGTCGCTTG 61.778 66.667 16.36 0.08 0.00 4.01
7533 7788 4.439901 AGGAGGGAAGGGGAGCCC 62.440 72.222 0.00 0.00 45.90 5.19
7534 7789 2.770475 GAGGAGGGAAGGGGAGCC 60.770 72.222 0.00 0.00 0.00 4.70
7535 7790 2.770475 GGAGGAGGGAAGGGGAGC 60.770 72.222 0.00 0.00 0.00 4.70
7536 7791 1.074850 GAGGAGGAGGGAAGGGGAG 60.075 68.421 0.00 0.00 0.00 4.30
7537 7792 2.647949 GGAGGAGGAGGGAAGGGGA 61.648 68.421 0.00 0.00 0.00 4.81
7538 7793 2.040359 GGAGGAGGAGGGAAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
7539 7794 2.040359 GGGAGGAGGAGGGAAGGG 60.040 72.222 0.00 0.00 0.00 3.95
7540 7795 1.383803 CTGGGAGGAGGAGGGAAGG 60.384 68.421 0.00 0.00 0.00 3.46
7541 7796 2.069430 GCTGGGAGGAGGAGGGAAG 61.069 68.421 0.00 0.00 0.00 3.46
7542 7797 2.041265 GCTGGGAGGAGGAGGGAA 59.959 66.667 0.00 0.00 0.00 3.97
7543 7798 4.465446 CGCTGGGAGGAGGAGGGA 62.465 72.222 0.00 0.00 0.00 4.20
7563 7818 1.151788 GGGGATTAGGAGGAGGGGG 60.152 68.421 0.00 0.00 0.00 5.40
7564 7819 0.178888 GAGGGGATTAGGAGGAGGGG 60.179 65.000 0.00 0.00 0.00 4.79
7565 7820 0.178888 GGAGGGGATTAGGAGGAGGG 60.179 65.000 0.00 0.00 0.00 4.30
7566 7821 0.178888 GGGAGGGGATTAGGAGGAGG 60.179 65.000 0.00 0.00 0.00 4.30
7567 7822 0.543174 CGGGAGGGGATTAGGAGGAG 60.543 65.000 0.00 0.00 0.00 3.69
7568 7823 1.547248 CGGGAGGGGATTAGGAGGA 59.453 63.158 0.00 0.00 0.00 3.71
7569 7824 2.217745 GCGGGAGGGGATTAGGAGG 61.218 68.421 0.00 0.00 0.00 4.30
7570 7825 2.217745 GGCGGGAGGGGATTAGGAG 61.218 68.421 0.00 0.00 0.00 3.69
7571 7826 2.122547 GGCGGGAGGGGATTAGGA 60.123 66.667 0.00 0.00 0.00 2.94
7572 7827 3.626924 CGGCGGGAGGGGATTAGG 61.627 72.222 0.00 0.00 0.00 2.69
7573 7828 4.315941 GCGGCGGGAGGGGATTAG 62.316 72.222 9.78 0.00 0.00 1.73
7708 7963 3.839353 GATCCATCGCCAGCCTGGG 62.839 68.421 13.78 2.71 38.19 4.45
7709 7964 2.281345 GATCCATCGCCAGCCTGG 60.281 66.667 6.32 6.32 41.55 4.45
7710 7965 2.281345 GGATCCATCGCCAGCCTG 60.281 66.667 6.95 0.00 0.00 4.85
7711 7966 3.933722 CGGATCCATCGCCAGCCT 61.934 66.667 13.41 0.00 0.00 4.58
7712 7967 4.996434 CCGGATCCATCGCCAGCC 62.996 72.222 13.41 0.00 0.00 4.85
7776 8031 4.170062 CAAGCAGCCGCATCACCG 62.170 66.667 0.00 0.00 42.27 4.94
7777 8032 3.818787 CCAAGCAGCCGCATCACC 61.819 66.667 0.00 0.00 42.27 4.02
7778 8033 4.487412 GCCAAGCAGCCGCATCAC 62.487 66.667 0.00 0.00 42.27 3.06
7779 8034 4.728110 AGCCAAGCAGCCGCATCA 62.728 61.111 0.00 0.00 42.27 3.07
7780 8035 4.189188 CAGCCAAGCAGCCGCATC 62.189 66.667 0.00 0.00 42.27 3.91
7828 8083 2.507944 CCAGATCTGGGCCGGAAG 59.492 66.667 31.14 12.19 46.81 3.46
7837 8092 0.685458 CCCAAAAGGGCCCAGATCTG 60.685 60.000 27.56 16.24 34.21 2.90
7838 8093 1.699752 CCCAAAAGGGCCCAGATCT 59.300 57.895 27.56 0.00 34.21 2.75
7839 8094 4.362479 CCCAAAAGGGCCCAGATC 57.638 61.111 27.56 0.00 34.21 2.75
7847 8102 1.686800 CAGATGGGGCCCAAAAGGG 60.687 63.158 32.57 13.88 36.95 3.95
7848 8103 1.686800 CCAGATGGGGCCCAAAAGG 60.687 63.158 32.57 25.88 36.95 3.11
7849 8104 4.039042 CCAGATGGGGCCCAAAAG 57.961 61.111 32.57 21.03 36.95 2.27
7859 8114 2.683465 CCCACCCAGACCCAGATGG 61.683 68.421 0.00 0.00 41.37 3.51
7860 8115 3.001514 CCCACCCAGACCCAGATG 58.998 66.667 0.00 0.00 0.00 2.90
7861 8116 3.017581 GCCCACCCAGACCCAGAT 61.018 66.667 0.00 0.00 0.00 2.90
7876 8131 3.435186 GAAAGCTCACGCCAGGCC 61.435 66.667 5.63 0.00 36.60 5.19
7877 8132 3.435186 GGAAAGCTCACGCCAGGC 61.435 66.667 0.00 0.00 36.60 4.85
7878 8133 3.121030 CGGAAAGCTCACGCCAGG 61.121 66.667 0.00 0.00 36.60 4.45
7879 8134 3.121030 CCGGAAAGCTCACGCCAG 61.121 66.667 0.00 0.00 36.60 4.85
7883 8138 3.479269 GACGCCGGAAAGCTCACG 61.479 66.667 5.05 0.00 0.00 4.35
7884 8139 1.696832 GATGACGCCGGAAAGCTCAC 61.697 60.000 5.05 0.00 0.00 3.51
7885 8140 1.447838 GATGACGCCGGAAAGCTCA 60.448 57.895 5.05 2.95 0.00 4.26
7886 8141 1.148759 GAGATGACGCCGGAAAGCTC 61.149 60.000 5.05 0.00 0.00 4.09
7887 8142 1.153549 GAGATGACGCCGGAAAGCT 60.154 57.895 5.05 0.00 0.00 3.74
7888 8143 2.174319 GGAGATGACGCCGGAAAGC 61.174 63.158 5.05 0.00 0.00 3.51
7889 8144 4.110493 GGAGATGACGCCGGAAAG 57.890 61.111 5.05 0.00 0.00 2.62
7896 8151 4.508128 TTCCGCCGGAGATGACGC 62.508 66.667 5.05 0.00 31.21 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.