Multiple sequence alignment - TraesCS3B01G458600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G458600 chr3B 100.000 4492 0 0 1 4492 701404461 701408952 0.000000e+00 8296
1 TraesCS3B01G458600 chr3B 90.759 303 21 6 1 299 446813452 446813153 9.050000e-107 398
2 TraesCS3B01G458600 chr3B 90.728 302 22 5 1 299 446849359 446849061 9.050000e-107 398
3 TraesCS3B01G458600 chr3B 89.180 305 24 6 1 299 446885291 446884990 5.490000e-99 372
4 TraesCS3B01G458600 chr3A 92.116 4059 195 74 409 4402 664682957 664686955 0.000000e+00 5607
5 TraesCS3B01G458600 chr3A 92.988 599 30 7 3437 4030 664703085 664703676 0.000000e+00 863
6 TraesCS3B01G458600 chr3D 94.554 2699 85 24 1745 4402 531044313 531046990 0.000000e+00 4113
7 TraesCS3B01G458600 chr3D 88.409 1389 88 41 406 1743 531042862 531044228 0.000000e+00 1605
8 TraesCS3B01G458600 chr1A 91.304 299 19 7 1 296 563421365 563421071 7.000000e-108 401
9 TraesCS3B01G458600 chr5B 90.970 299 23 3 1 297 15681985 15681689 2.520000e-107 399
10 TraesCS3B01G458600 chr5B 90.530 264 12 3 1 264 7075243 7074993 2.000000e-88 337
11 TraesCS3B01G458600 chr2B 93.939 264 13 3 1 263 704751305 704751044 3.260000e-106 396
12 TraesCS3B01G458600 chr5A 88.889 297 28 3 1 294 540716177 540716471 1.190000e-95 361
13 TraesCS3B01G458600 chr7A 87.218 266 20 3 29 294 701126928 701126677 1.580000e-74 291
14 TraesCS3B01G458600 chr5D 83.051 295 31 10 1 294 561621368 561621644 2.680000e-62 250


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G458600 chr3B 701404461 701408952 4491 False 8296 8296 100.0000 1 4492 1 chr3B.!!$F1 4491
1 TraesCS3B01G458600 chr3A 664682957 664686955 3998 False 5607 5607 92.1160 409 4402 1 chr3A.!!$F1 3993
2 TraesCS3B01G458600 chr3A 664703085 664703676 591 False 863 863 92.9880 3437 4030 1 chr3A.!!$F2 593
3 TraesCS3B01G458600 chr3D 531042862 531046990 4128 False 2859 4113 91.4815 406 4402 2 chr3D.!!$F1 3996

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
352 353 0.033090 TTGACAATGCGCATTTGGCA 59.967 45.000 32.13 28.91 45.17 4.92 F
408 409 0.178068 ACCATGGCAGGTAAGCTACG 59.822 55.000 13.04 0.00 40.98 3.51 F
617 632 0.825840 GCCACCAGCAAAACTACCCA 60.826 55.000 0.00 0.00 42.97 4.51 F
619 634 1.247567 CACCAGCAAAACTACCCAGG 58.752 55.000 0.00 0.00 0.00 4.45 F
1510 1581 1.331756 GTTGCTGCCGGTGATGATTAG 59.668 52.381 1.90 0.00 0.00 1.73 F
2871 3027 0.685097 TCCTGCACCAGTACAACTCC 59.315 55.000 0.00 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1327 1377 0.171903 ATGCAGCGATTTGGTTCAGC 59.828 50.000 0.0 0.0 0.00 4.26 R
1459 1528 0.387202 CACCAACAACAAATCCGCCA 59.613 50.000 0.0 0.0 0.00 5.69 R
1887 2039 0.403271 ATGACTCCAACCTTGCTGCT 59.597 50.000 0.0 0.0 0.00 4.24 R
2105 2261 1.625818 AGGTCAAGAATCGAGCTGGTT 59.374 47.619 0.0 0.0 39.65 3.67 R
2963 3119 0.404040 TCCTGGGTTTCGCCTTTGAT 59.596 50.000 0.0 0.0 37.43 2.57 R
4445 4640 0.029700 AAAACACCCAAACGCTACGC 59.970 50.000 0.0 0.0 0.00 4.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.828925 GCTGGAGAGGAGGCACGC 62.829 72.222 0.00 0.00 0.00 5.34
18 19 4.504916 CTGGAGAGGAGGCACGCG 62.505 72.222 3.53 3.53 0.00 6.01
39 40 1.809684 GGTGACGGGAGGAAGAAAAG 58.190 55.000 0.00 0.00 0.00 2.27
40 41 1.071857 GGTGACGGGAGGAAGAAAAGT 59.928 52.381 0.00 0.00 0.00 2.66
41 42 2.143925 GTGACGGGAGGAAGAAAAGTG 58.856 52.381 0.00 0.00 0.00 3.16
42 43 1.071699 TGACGGGAGGAAGAAAAGTGG 59.928 52.381 0.00 0.00 0.00 4.00
43 44 0.400594 ACGGGAGGAAGAAAAGTGGG 59.599 55.000 0.00 0.00 0.00 4.61
44 45 0.322546 CGGGAGGAAGAAAAGTGGGG 60.323 60.000 0.00 0.00 0.00 4.96
45 46 1.073098 GGGAGGAAGAAAAGTGGGGA 58.927 55.000 0.00 0.00 0.00 4.81
46 47 1.004862 GGGAGGAAGAAAAGTGGGGAG 59.995 57.143 0.00 0.00 0.00 4.30
47 48 1.985895 GGAGGAAGAAAAGTGGGGAGA 59.014 52.381 0.00 0.00 0.00 3.71
48 49 2.026729 GGAGGAAGAAAAGTGGGGAGAG 60.027 54.545 0.00 0.00 0.00 3.20
49 50 2.907042 GAGGAAGAAAAGTGGGGAGAGA 59.093 50.000 0.00 0.00 0.00 3.10
50 51 2.909662 AGGAAGAAAAGTGGGGAGAGAG 59.090 50.000 0.00 0.00 0.00 3.20
51 52 2.907042 GGAAGAAAAGTGGGGAGAGAGA 59.093 50.000 0.00 0.00 0.00 3.10
52 53 3.055458 GGAAGAAAAGTGGGGAGAGAGAG 60.055 52.174 0.00 0.00 0.00 3.20
53 54 3.551635 AGAAAAGTGGGGAGAGAGAGA 57.448 47.619 0.00 0.00 0.00 3.10
54 55 3.440127 AGAAAAGTGGGGAGAGAGAGAG 58.560 50.000 0.00 0.00 0.00 3.20
55 56 3.076785 AGAAAAGTGGGGAGAGAGAGAGA 59.923 47.826 0.00 0.00 0.00 3.10
56 57 2.525105 AAGTGGGGAGAGAGAGAGAC 57.475 55.000 0.00 0.00 0.00 3.36
57 58 0.254747 AGTGGGGAGAGAGAGAGACG 59.745 60.000 0.00 0.00 0.00 4.18
58 59 0.253610 GTGGGGAGAGAGAGAGACGA 59.746 60.000 0.00 0.00 0.00 4.20
59 60 0.992695 TGGGGAGAGAGAGAGACGAA 59.007 55.000 0.00 0.00 0.00 3.85
60 61 1.354705 TGGGGAGAGAGAGAGACGAAA 59.645 52.381 0.00 0.00 0.00 3.46
61 62 2.225041 TGGGGAGAGAGAGAGACGAAAA 60.225 50.000 0.00 0.00 0.00 2.29
62 63 2.425668 GGGGAGAGAGAGAGACGAAAAG 59.574 54.545 0.00 0.00 0.00 2.27
63 64 2.425668 GGGAGAGAGAGAGACGAAAAGG 59.574 54.545 0.00 0.00 0.00 3.11
64 65 3.086282 GGAGAGAGAGAGACGAAAAGGT 58.914 50.000 0.00 0.00 0.00 3.50
65 66 3.508402 GGAGAGAGAGAGACGAAAAGGTT 59.492 47.826 0.00 0.00 0.00 3.50
66 67 4.481463 GAGAGAGAGAGACGAAAAGGTTG 58.519 47.826 0.00 0.00 0.00 3.77
67 68 3.257127 AGAGAGAGAGACGAAAAGGTTGG 59.743 47.826 0.00 0.00 0.00 3.77
68 69 2.300437 AGAGAGAGACGAAAAGGTTGGG 59.700 50.000 0.00 0.00 0.00 4.12
69 70 1.348036 AGAGAGACGAAAAGGTTGGGG 59.652 52.381 0.00 0.00 0.00 4.96
70 71 1.346722 GAGAGACGAAAAGGTTGGGGA 59.653 52.381 0.00 0.00 0.00 4.81
71 72 1.348036 AGAGACGAAAAGGTTGGGGAG 59.652 52.381 0.00 0.00 0.00 4.30
72 73 1.346722 GAGACGAAAAGGTTGGGGAGA 59.653 52.381 0.00 0.00 0.00 3.71
73 74 1.348036 AGACGAAAAGGTTGGGGAGAG 59.652 52.381 0.00 0.00 0.00 3.20
74 75 1.346722 GACGAAAAGGTTGGGGAGAGA 59.653 52.381 0.00 0.00 0.00 3.10
75 76 1.348036 ACGAAAAGGTTGGGGAGAGAG 59.652 52.381 0.00 0.00 0.00 3.20
76 77 1.623811 CGAAAAGGTTGGGGAGAGAGA 59.376 52.381 0.00 0.00 0.00 3.10
77 78 2.038557 CGAAAAGGTTGGGGAGAGAGAA 59.961 50.000 0.00 0.00 0.00 2.87
78 79 3.680490 GAAAAGGTTGGGGAGAGAGAAG 58.320 50.000 0.00 0.00 0.00 2.85
79 80 2.723530 AAGGTTGGGGAGAGAGAAGA 57.276 50.000 0.00 0.00 0.00 2.87
80 81 2.959421 AGGTTGGGGAGAGAGAAGAT 57.041 50.000 0.00 0.00 0.00 2.40
81 82 4.354208 AAGGTTGGGGAGAGAGAAGATA 57.646 45.455 0.00 0.00 0.00 1.98
82 83 4.567987 AGGTTGGGGAGAGAGAAGATAT 57.432 45.455 0.00 0.00 0.00 1.63
83 84 4.488770 AGGTTGGGGAGAGAGAAGATATC 58.511 47.826 0.00 0.00 0.00 1.63
84 85 4.171841 AGGTTGGGGAGAGAGAAGATATCT 59.828 45.833 0.00 0.00 42.61 1.98
97 98 4.832266 AGAAGATATCTCACTGCAGGTAGG 59.168 45.833 19.93 4.62 30.46 3.18
98 99 3.505386 AGATATCTCACTGCAGGTAGGG 58.495 50.000 19.93 7.67 0.00 3.53
99 100 1.414158 TATCTCACTGCAGGTAGGGC 58.586 55.000 19.93 0.00 0.00 5.19
100 101 0.618680 ATCTCACTGCAGGTAGGGCA 60.619 55.000 19.93 0.00 39.32 5.36
101 102 0.835971 TCTCACTGCAGGTAGGGCAA 60.836 55.000 19.93 0.00 41.39 4.52
102 103 0.674895 CTCACTGCAGGTAGGGCAAC 60.675 60.000 19.93 0.00 41.39 4.17
103 104 2.034879 CACTGCAGGTAGGGCAACG 61.035 63.158 19.93 0.00 41.39 4.10
104 105 3.127533 CTGCAGGTAGGGCAACGC 61.128 66.667 5.57 0.00 41.39 4.84
105 106 3.612247 CTGCAGGTAGGGCAACGCT 62.612 63.158 5.57 0.00 41.39 5.07
106 107 2.359975 GCAGGTAGGGCAACGCTT 60.360 61.111 0.00 0.00 37.60 4.68
107 108 2.690778 GCAGGTAGGGCAACGCTTG 61.691 63.158 0.00 0.00 37.60 4.01
117 118 1.830338 CAACGCTTGCAAAACGACG 59.170 52.632 23.68 14.03 0.00 5.12
118 119 0.587737 CAACGCTTGCAAAACGACGA 60.588 50.000 23.68 0.00 0.00 4.20
119 120 0.097325 AACGCTTGCAAAACGACGAA 59.903 45.000 23.68 0.00 0.00 3.85
120 121 0.097325 ACGCTTGCAAAACGACGAAA 59.903 45.000 23.68 0.00 0.00 3.46
121 122 1.268335 ACGCTTGCAAAACGACGAAAT 60.268 42.857 23.68 2.22 0.00 2.17
122 123 1.778591 CGCTTGCAAAACGACGAAATT 59.221 42.857 14.57 0.00 0.00 1.82
123 124 2.968006 CGCTTGCAAAACGACGAAATTA 59.032 40.909 14.57 0.00 0.00 1.40
124 125 3.056319 CGCTTGCAAAACGACGAAATTAG 59.944 43.478 14.57 0.00 0.00 1.73
125 126 3.181553 GCTTGCAAAACGACGAAATTAGC 60.182 43.478 0.00 0.00 0.00 3.09
126 127 2.923643 TGCAAAACGACGAAATTAGCC 58.076 42.857 0.00 0.00 0.00 3.93
127 128 2.247637 GCAAAACGACGAAATTAGCCC 58.752 47.619 0.00 0.00 0.00 5.19
128 129 2.858839 CAAAACGACGAAATTAGCCCC 58.141 47.619 0.00 0.00 0.00 5.80
129 130 1.456296 AAACGACGAAATTAGCCCCC 58.544 50.000 0.00 0.00 0.00 5.40
149 150 4.748144 GGTGCCCCCAGCTTCCTG 62.748 72.222 0.00 0.00 44.23 3.86
159 160 3.443588 GCTTCCTGCGTTTGGGTT 58.556 55.556 0.00 0.00 0.00 4.11
160 161 1.007387 GCTTCCTGCGTTTGGGTTG 60.007 57.895 0.00 0.00 0.00 3.77
161 162 1.007387 CTTCCTGCGTTTGGGTTGC 60.007 57.895 0.00 0.00 0.00 4.17
162 163 2.731587 CTTCCTGCGTTTGGGTTGCG 62.732 60.000 0.00 0.00 0.00 4.85
163 164 4.341502 CCTGCGTTTGGGTTGCGG 62.342 66.667 0.00 0.00 34.77 5.69
164 165 3.591835 CTGCGTTTGGGTTGCGGT 61.592 61.111 0.00 0.00 0.00 5.68
165 166 3.132481 CTGCGTTTGGGTTGCGGTT 62.132 57.895 0.00 0.00 0.00 4.44
166 167 2.656973 GCGTTTGGGTTGCGGTTG 60.657 61.111 0.00 0.00 0.00 3.77
167 168 2.656973 CGTTTGGGTTGCGGTTGC 60.657 61.111 0.00 0.00 43.20 4.17
168 169 2.279851 GTTTGGGTTGCGGTTGCC 60.280 61.111 0.00 0.00 41.78 4.52
179 180 3.223589 GGTTGCCGGCACCAGTTT 61.224 61.111 32.95 0.00 0.00 2.66
180 181 2.791868 GGTTGCCGGCACCAGTTTT 61.792 57.895 32.95 0.00 0.00 2.43
181 182 1.142965 GTTGCCGGCACCAGTTTTT 59.857 52.632 32.95 0.00 0.00 1.94
182 183 1.142748 TTGCCGGCACCAGTTTTTG 59.857 52.632 32.95 0.00 0.00 2.44
183 184 1.608717 TTGCCGGCACCAGTTTTTGT 61.609 50.000 32.95 0.00 0.00 2.83
184 185 1.142965 GCCGGCACCAGTTTTTGTT 59.857 52.632 24.80 0.00 0.00 2.83
185 186 0.461163 GCCGGCACCAGTTTTTGTTT 60.461 50.000 24.80 0.00 0.00 2.83
186 187 2.009542 GCCGGCACCAGTTTTTGTTTT 61.010 47.619 24.80 0.00 0.00 2.43
187 188 2.738964 GCCGGCACCAGTTTTTGTTTTA 60.739 45.455 24.80 0.00 0.00 1.52
188 189 3.723260 CCGGCACCAGTTTTTGTTTTAT 58.277 40.909 0.00 0.00 0.00 1.40
189 190 3.738791 CCGGCACCAGTTTTTGTTTTATC 59.261 43.478 0.00 0.00 0.00 1.75
190 191 3.738791 CGGCACCAGTTTTTGTTTTATCC 59.261 43.478 0.00 0.00 0.00 2.59
191 192 3.738791 GGCACCAGTTTTTGTTTTATCCG 59.261 43.478 0.00 0.00 0.00 4.18
192 193 3.738791 GCACCAGTTTTTGTTTTATCCGG 59.261 43.478 0.00 0.00 0.00 5.14
193 194 3.738791 CACCAGTTTTTGTTTTATCCGGC 59.261 43.478 0.00 0.00 0.00 6.13
194 195 2.983803 CCAGTTTTTGTTTTATCCGGCG 59.016 45.455 0.00 0.00 0.00 6.46
195 196 3.304794 CCAGTTTTTGTTTTATCCGGCGA 60.305 43.478 9.30 0.00 0.00 5.54
196 197 4.291783 CAGTTTTTGTTTTATCCGGCGAA 58.708 39.130 9.30 0.00 0.00 4.70
197 198 4.740695 CAGTTTTTGTTTTATCCGGCGAAA 59.259 37.500 9.30 0.00 0.00 3.46
198 199 5.232414 CAGTTTTTGTTTTATCCGGCGAAAA 59.768 36.000 9.30 4.45 0.00 2.29
199 200 5.811100 AGTTTTTGTTTTATCCGGCGAAAAA 59.189 32.000 9.30 9.49 0.00 1.94
200 201 5.891810 TTTTGTTTTATCCGGCGAAAAAG 57.108 34.783 9.30 0.00 0.00 2.27
201 202 3.562567 TGTTTTATCCGGCGAAAAAGG 57.437 42.857 9.30 0.00 0.00 3.11
202 203 3.147629 TGTTTTATCCGGCGAAAAAGGA 58.852 40.909 9.30 0.00 38.56 3.36
203 204 3.189702 TGTTTTATCCGGCGAAAAAGGAG 59.810 43.478 9.30 0.00 37.49 3.69
204 205 3.337694 TTTATCCGGCGAAAAAGGAGA 57.662 42.857 9.30 0.00 37.49 3.71
205 206 2.596904 TATCCGGCGAAAAAGGAGAG 57.403 50.000 9.30 0.00 37.49 3.20
206 207 0.613777 ATCCGGCGAAAAAGGAGAGT 59.386 50.000 9.30 0.00 37.49 3.24
207 208 0.395312 TCCGGCGAAAAAGGAGAGTT 59.605 50.000 9.30 0.00 0.00 3.01
208 209 1.202722 TCCGGCGAAAAAGGAGAGTTT 60.203 47.619 9.30 0.00 0.00 2.66
209 210 1.069227 CCGGCGAAAAAGGAGAGTTTG 60.069 52.381 9.30 0.00 0.00 2.93
210 211 1.069227 CGGCGAAAAAGGAGAGTTTGG 60.069 52.381 0.00 0.00 0.00 3.28
211 212 1.269723 GGCGAAAAAGGAGAGTTTGGG 59.730 52.381 0.00 0.00 0.00 4.12
212 213 1.269723 GCGAAAAAGGAGAGTTTGGGG 59.730 52.381 0.00 0.00 0.00 4.96
213 214 2.583143 CGAAAAAGGAGAGTTTGGGGT 58.417 47.619 0.00 0.00 0.00 4.95
214 215 2.293399 CGAAAAAGGAGAGTTTGGGGTG 59.707 50.000 0.00 0.00 0.00 4.61
215 216 3.562182 GAAAAAGGAGAGTTTGGGGTGA 58.438 45.455 0.00 0.00 0.00 4.02
216 217 2.658807 AAAGGAGAGTTTGGGGTGAC 57.341 50.000 0.00 0.00 0.00 3.67
217 218 0.396811 AAGGAGAGTTTGGGGTGACG 59.603 55.000 0.00 0.00 0.00 4.35
218 219 0.471211 AGGAGAGTTTGGGGTGACGA 60.471 55.000 0.00 0.00 0.00 4.20
219 220 0.037232 GGAGAGTTTGGGGTGACGAG 60.037 60.000 0.00 0.00 0.00 4.18
220 221 0.680061 GAGAGTTTGGGGTGACGAGT 59.320 55.000 0.00 0.00 0.00 4.18
221 222 0.393077 AGAGTTTGGGGTGACGAGTG 59.607 55.000 0.00 0.00 0.00 3.51
222 223 0.602905 GAGTTTGGGGTGACGAGTGG 60.603 60.000 0.00 0.00 0.00 4.00
223 224 1.599797 GTTTGGGGTGACGAGTGGG 60.600 63.158 0.00 0.00 0.00 4.61
224 225 1.766864 TTTGGGGTGACGAGTGGGA 60.767 57.895 0.00 0.00 0.00 4.37
225 226 1.346479 TTTGGGGTGACGAGTGGGAA 61.346 55.000 0.00 0.00 0.00 3.97
226 227 1.764571 TTGGGGTGACGAGTGGGAAG 61.765 60.000 0.00 0.00 0.00 3.46
227 228 1.911766 GGGGTGACGAGTGGGAAGA 60.912 63.158 0.00 0.00 0.00 2.87
228 229 1.265454 GGGGTGACGAGTGGGAAGAT 61.265 60.000 0.00 0.00 0.00 2.40
229 230 0.613777 GGGTGACGAGTGGGAAGATT 59.386 55.000 0.00 0.00 0.00 2.40
230 231 1.003233 GGGTGACGAGTGGGAAGATTT 59.997 52.381 0.00 0.00 0.00 2.17
231 232 2.552373 GGGTGACGAGTGGGAAGATTTT 60.552 50.000 0.00 0.00 0.00 1.82
232 233 3.146847 GGTGACGAGTGGGAAGATTTTT 58.853 45.455 0.00 0.00 0.00 1.94
233 234 3.058224 GGTGACGAGTGGGAAGATTTTTG 60.058 47.826 0.00 0.00 0.00 2.44
234 235 3.564225 GTGACGAGTGGGAAGATTTTTGT 59.436 43.478 0.00 0.00 0.00 2.83
235 236 3.813166 TGACGAGTGGGAAGATTTTTGTC 59.187 43.478 0.00 0.00 0.00 3.18
236 237 4.065789 GACGAGTGGGAAGATTTTTGTCT 58.934 43.478 0.00 0.00 0.00 3.41
237 238 3.815401 ACGAGTGGGAAGATTTTTGTCTG 59.185 43.478 0.00 0.00 0.00 3.51
238 239 3.365364 CGAGTGGGAAGATTTTTGTCTGC 60.365 47.826 0.00 0.00 0.00 4.26
239 240 2.893489 AGTGGGAAGATTTTTGTCTGCC 59.107 45.455 0.00 0.00 42.46 4.85
240 241 1.885887 TGGGAAGATTTTTGTCTGCCG 59.114 47.619 0.00 0.00 43.90 5.69
241 242 1.202348 GGGAAGATTTTTGTCTGCCGG 59.798 52.381 0.00 0.00 43.90 6.13
242 243 1.402852 GGAAGATTTTTGTCTGCCGGC 60.403 52.381 22.73 22.73 34.25 6.13
243 244 0.240945 AAGATTTTTGTCTGCCGGCG 59.759 50.000 23.90 16.91 0.00 6.46
244 245 1.801512 GATTTTTGTCTGCCGGCGC 60.802 57.895 23.90 15.15 0.00 6.53
245 246 3.609214 ATTTTTGTCTGCCGGCGCG 62.609 57.895 23.90 15.91 38.08 6.86
251 252 4.673298 TCTGCCGGCGCGAGAAAA 62.673 61.111 23.90 0.00 38.08 2.29
252 253 3.722295 CTGCCGGCGCGAGAAAAA 61.722 61.111 23.90 0.00 38.08 1.94
253 254 3.651480 CTGCCGGCGCGAGAAAAAG 62.651 63.158 23.90 6.04 38.08 2.27
254 255 3.723348 GCCGGCGCGAGAAAAAGT 61.723 61.111 12.58 0.00 0.00 2.66
255 256 2.173382 CCGGCGCGAGAAAAAGTG 59.827 61.111 12.10 0.00 0.00 3.16
256 257 2.499732 CGGCGCGAGAAAAAGTGC 60.500 61.111 12.10 0.00 42.55 4.40
258 259 2.946762 GCGCGAGAAAAAGTGCCT 59.053 55.556 12.10 0.00 37.86 4.75
259 260 1.441016 GCGCGAGAAAAAGTGCCTG 60.441 57.895 12.10 0.00 37.86 4.85
260 261 1.207593 CGCGAGAAAAAGTGCCTGG 59.792 57.895 0.00 0.00 0.00 4.45
261 262 1.581447 GCGAGAAAAAGTGCCTGGG 59.419 57.895 0.00 0.00 0.00 4.45
262 263 1.866853 GCGAGAAAAAGTGCCTGGGG 61.867 60.000 0.00 0.00 0.00 4.96
263 264 1.244019 CGAGAAAAAGTGCCTGGGGG 61.244 60.000 0.00 0.00 0.00 5.40
264 265 0.112412 GAGAAAAAGTGCCTGGGGGA 59.888 55.000 0.00 0.00 33.58 4.81
265 266 0.786435 AGAAAAAGTGCCTGGGGGAT 59.214 50.000 0.00 0.00 33.58 3.85
266 267 1.149923 AGAAAAAGTGCCTGGGGGATT 59.850 47.619 0.00 0.00 33.58 3.01
267 268 1.977854 GAAAAAGTGCCTGGGGGATTT 59.022 47.619 0.00 0.00 33.58 2.17
268 269 3.169908 GAAAAAGTGCCTGGGGGATTTA 58.830 45.455 0.00 0.00 33.58 1.40
269 270 2.532250 AAAGTGCCTGGGGGATTTAG 57.468 50.000 0.00 0.00 33.58 1.85
270 271 1.382914 AAGTGCCTGGGGGATTTAGT 58.617 50.000 0.00 0.00 33.58 2.24
271 272 0.625849 AGTGCCTGGGGGATTTAGTG 59.374 55.000 0.00 0.00 33.58 2.74
272 273 0.395724 GTGCCTGGGGGATTTAGTGG 60.396 60.000 0.00 0.00 33.58 4.00
273 274 1.230212 GCCTGGGGGATTTAGTGGG 59.770 63.158 0.00 0.00 33.58 4.61
274 275 1.930520 CCTGGGGGATTTAGTGGGG 59.069 63.158 0.00 0.00 33.58 4.96
275 276 1.655114 CCTGGGGGATTTAGTGGGGG 61.655 65.000 0.00 0.00 33.58 5.40
292 293 4.925861 GGCCGGCTGGAGATGCTC 62.926 72.222 28.56 0.41 37.49 4.26
293 294 3.859414 GCCGGCTGGAGATGCTCT 61.859 66.667 22.15 0.00 37.49 4.09
294 295 2.502492 GCCGGCTGGAGATGCTCTA 61.502 63.158 22.15 0.00 37.49 2.43
295 296 2.032860 GCCGGCTGGAGATGCTCTAA 62.033 60.000 22.15 0.00 37.49 2.10
296 297 0.033228 CCGGCTGGAGATGCTCTAAG 59.967 60.000 5.28 0.00 37.49 2.18
297 298 0.749649 CGGCTGGAGATGCTCTAAGT 59.250 55.000 0.00 0.00 0.00 2.24
298 299 1.269517 CGGCTGGAGATGCTCTAAGTC 60.270 57.143 0.00 0.00 0.00 3.01
299 300 2.038659 GGCTGGAGATGCTCTAAGTCT 58.961 52.381 0.00 0.00 0.00 3.24
300 301 2.433970 GGCTGGAGATGCTCTAAGTCTT 59.566 50.000 0.00 0.00 0.00 3.01
301 302 3.456280 GCTGGAGATGCTCTAAGTCTTG 58.544 50.000 0.00 0.00 0.00 3.02
302 303 3.740764 GCTGGAGATGCTCTAAGTCTTGG 60.741 52.174 0.00 0.00 0.00 3.61
303 304 3.445008 TGGAGATGCTCTAAGTCTTGGT 58.555 45.455 0.00 0.00 0.00 3.67
304 305 4.610333 TGGAGATGCTCTAAGTCTTGGTA 58.390 43.478 0.00 0.00 0.00 3.25
305 306 5.211973 TGGAGATGCTCTAAGTCTTGGTAT 58.788 41.667 0.00 0.00 0.00 2.73
306 307 5.663106 TGGAGATGCTCTAAGTCTTGGTATT 59.337 40.000 0.00 0.00 0.00 1.89
307 308 5.988561 GGAGATGCTCTAAGTCTTGGTATTG 59.011 44.000 0.00 0.00 0.00 1.90
308 309 5.363939 AGATGCTCTAAGTCTTGGTATTGC 58.636 41.667 0.00 0.00 0.00 3.56
309 310 3.873910 TGCTCTAAGTCTTGGTATTGCC 58.126 45.455 0.00 0.00 37.90 4.52
321 322 2.697751 TGGTATTGCCAATGGTATTGCC 59.302 45.455 11.21 11.21 45.94 4.52
322 323 2.697751 GGTATTGCCAATGGTATTGCCA 59.302 45.455 12.74 0.00 44.21 4.92
323 324 3.133721 GGTATTGCCAATGGTATTGCCAA 59.866 43.478 12.74 2.96 43.66 4.52
324 325 4.202346 GGTATTGCCAATGGTATTGCCAAT 60.202 41.667 12.74 13.13 43.66 3.16
325 326 6.255330 GGTATTGCCAATGGTATTGCCAATG 61.255 44.000 16.42 0.00 45.53 2.82
335 336 5.927954 GGTATTGCCAATGCCAATATTTG 57.072 39.130 18.34 0.00 42.52 2.32
336 337 5.609423 GGTATTGCCAATGCCAATATTTGA 58.391 37.500 18.34 0.00 42.52 2.69
337 338 5.466393 GGTATTGCCAATGCCAATATTTGAC 59.534 40.000 18.34 0.00 42.52 3.18
338 339 4.548451 TTGCCAATGCCAATATTTGACA 57.452 36.364 0.00 0.00 36.33 3.58
339 340 4.548451 TGCCAATGCCAATATTTGACAA 57.452 36.364 0.00 0.00 36.33 3.18
340 341 5.100344 TGCCAATGCCAATATTTGACAAT 57.900 34.783 0.00 0.00 36.33 2.71
341 342 4.876679 TGCCAATGCCAATATTTGACAATG 59.123 37.500 0.00 0.00 36.33 2.82
342 343 4.260866 GCCAATGCCAATATTTGACAATGC 60.261 41.667 0.00 0.00 0.00 3.56
343 344 4.025563 CCAATGCCAATATTTGACAATGCG 60.026 41.667 0.00 0.00 0.00 4.73
344 345 2.538437 TGCCAATATTTGACAATGCGC 58.462 42.857 0.00 0.00 0.00 6.09
345 346 2.094338 TGCCAATATTTGACAATGCGCA 60.094 40.909 14.96 14.96 0.00 6.09
346 347 3.125316 GCCAATATTTGACAATGCGCAT 58.875 40.909 19.28 19.28 0.00 4.73
347 348 3.556775 GCCAATATTTGACAATGCGCATT 59.443 39.130 29.36 29.36 0.00 3.56
348 349 4.034279 GCCAATATTTGACAATGCGCATTT 59.966 37.500 32.13 22.33 0.00 2.32
349 350 5.494618 CCAATATTTGACAATGCGCATTTG 58.505 37.500 32.13 26.41 0.00 2.32
350 351 5.494618 CAATATTTGACAATGCGCATTTGG 58.505 37.500 32.13 23.54 0.00 3.28
351 352 1.146637 TTTGACAATGCGCATTTGGC 58.853 45.000 32.13 26.91 39.90 4.52
352 353 0.033090 TTGACAATGCGCATTTGGCA 59.967 45.000 32.13 28.91 45.17 4.92
353 354 0.033090 TGACAATGCGCATTTGGCAA 59.967 45.000 32.13 16.46 44.66 4.52
354 355 0.717224 GACAATGCGCATTTGGCAAG 59.283 50.000 32.13 21.43 44.66 4.01
355 356 1.293267 ACAATGCGCATTTGGCAAGC 61.293 50.000 32.13 0.63 44.66 4.01
356 357 1.742510 AATGCGCATTTGGCAAGCC 60.743 52.632 29.36 3.61 44.66 4.35
357 358 2.451928 AATGCGCATTTGGCAAGCCA 62.452 50.000 29.36 10.24 44.66 4.75
376 377 4.410492 CCAAATATCGGCAGCTGTATTC 57.590 45.455 16.64 0.00 0.00 1.75
377 378 3.814842 CCAAATATCGGCAGCTGTATTCA 59.185 43.478 16.64 0.00 0.00 2.57
378 379 4.319766 CCAAATATCGGCAGCTGTATTCAC 60.320 45.833 16.64 0.00 0.00 3.18
379 380 2.526304 TATCGGCAGCTGTATTCACC 57.474 50.000 16.64 5.62 0.00 4.02
380 381 0.530650 ATCGGCAGCTGTATTCACCG 60.531 55.000 18.63 18.63 41.92 4.94
381 382 2.813179 CGGCAGCTGTATTCACCGC 61.813 63.158 16.64 0.00 35.31 5.68
382 383 2.703409 GCAGCTGTATTCACCGCG 59.297 61.111 16.64 0.00 39.63 6.46
383 384 2.813179 GCAGCTGTATTCACCGCGG 61.813 63.158 26.86 26.86 39.63 6.46
384 385 2.511600 AGCTGTATTCACCGCGGC 60.512 61.111 28.58 8.37 39.63 6.53
385 386 3.925238 GCTGTATTCACCGCGGCG 61.925 66.667 28.58 18.04 0.00 6.46
401 402 4.155733 CGGCGACCATGGCAGGTA 62.156 66.667 13.04 0.00 43.38 3.08
402 403 2.270850 GGCGACCATGGCAGGTAA 59.729 61.111 13.04 0.00 43.38 2.85
403 404 1.819632 GGCGACCATGGCAGGTAAG 60.820 63.158 13.04 7.38 43.38 2.34
404 405 2.472909 GCGACCATGGCAGGTAAGC 61.473 63.158 13.04 12.18 43.38 3.09
405 406 1.221840 CGACCATGGCAGGTAAGCT 59.778 57.895 13.04 0.00 43.38 3.74
406 407 0.464036 CGACCATGGCAGGTAAGCTA 59.536 55.000 13.04 0.00 43.38 3.32
407 408 1.806623 CGACCATGGCAGGTAAGCTAC 60.807 57.143 13.04 0.00 43.38 3.58
408 409 0.178068 ACCATGGCAGGTAAGCTACG 59.822 55.000 13.04 0.00 40.98 3.51
409 410 1.160329 CCATGGCAGGTAAGCTACGC 61.160 60.000 0.00 0.00 34.17 4.42
410 411 1.146263 ATGGCAGGTAAGCTACGCC 59.854 57.895 0.00 5.17 43.28 5.68
411 412 1.338136 ATGGCAGGTAAGCTACGCCT 61.338 55.000 11.57 5.77 43.38 5.52
413 414 4.110493 CAGGTAAGCTACGCCTGC 57.890 61.111 15.28 0.00 42.54 4.85
530 531 2.674380 CGCAGCCAAAGCCCTCTT 60.674 61.111 0.00 0.00 41.25 2.85
531 532 2.694760 CGCAGCCAAAGCCCTCTTC 61.695 63.158 0.00 0.00 41.25 2.87
532 533 2.346541 GCAGCCAAAGCCCTCTTCC 61.347 63.158 0.00 0.00 41.25 3.46
534 535 2.363018 GCCAAAGCCCTCTTCCCC 60.363 66.667 0.00 0.00 0.00 4.81
535 536 3.180282 CCAAAGCCCTCTTCCCCA 58.820 61.111 0.00 0.00 0.00 4.96
542 557 3.339093 CCTCTTCCCCACCACCCC 61.339 72.222 0.00 0.00 0.00 4.95
546 561 3.860930 CTTCCCCACCACCCCAACG 62.861 68.421 0.00 0.00 0.00 4.10
598 613 2.663196 GGGACACCCTCACCTTCG 59.337 66.667 0.00 0.00 41.34 3.79
607 622 3.535629 CTCACCTTCGCCACCAGCA 62.536 63.158 0.00 0.00 44.04 4.41
617 632 0.825840 GCCACCAGCAAAACTACCCA 60.826 55.000 0.00 0.00 42.97 4.51
619 634 1.247567 CACCAGCAAAACTACCCAGG 58.752 55.000 0.00 0.00 0.00 4.45
631 646 4.704833 CCCAGGGGCACTGTGTCG 62.705 72.222 16.92 0.00 46.06 4.35
649 664 1.453928 GATTACCTGTGGGGCCAGC 60.454 63.158 4.39 0.00 39.10 4.85
725 740 4.988598 AAGGTGGCAGCGTGGTCG 62.989 66.667 11.51 0.00 40.37 4.79
978 1009 1.620822 GATCAGAGGAGAGAGAGGGC 58.379 60.000 0.00 0.00 0.00 5.19
1269 1319 4.619227 CCCCACAGGTTCGTGCGT 62.619 66.667 0.00 0.00 35.47 5.24
1270 1320 3.041940 CCCACAGGTTCGTGCGTC 61.042 66.667 0.00 0.00 35.47 5.19
1271 1321 3.041940 CCACAGGTTCGTGCGTCC 61.042 66.667 0.00 0.00 35.47 4.79
1272 1322 2.029073 CACAGGTTCGTGCGTCCT 59.971 61.111 5.62 5.62 0.00 3.85
1282 1332 1.985116 GTGCGTCCTCCTTCTCCCT 60.985 63.158 0.00 0.00 0.00 4.20
1292 1342 1.690985 CTTCTCCCTCCCACCTCCC 60.691 68.421 0.00 0.00 0.00 4.30
1293 1343 2.184631 TTCTCCCTCCCACCTCCCT 61.185 63.158 0.00 0.00 0.00 4.20
1294 1344 1.761780 TTCTCCCTCCCACCTCCCTT 61.762 60.000 0.00 0.00 0.00 3.95
1295 1345 1.690985 CTCCCTCCCACCTCCCTTC 60.691 68.421 0.00 0.00 0.00 3.46
1296 1346 2.692741 CCCTCCCACCTCCCTTCC 60.693 72.222 0.00 0.00 0.00 3.46
1305 1355 2.447714 CCTCCCTTCCTGCTAGGCC 61.448 68.421 0.00 0.00 34.61 5.19
1308 1358 1.997874 CCCTTCCTGCTAGGCCACT 60.998 63.158 5.01 0.00 34.61 4.00
1351 1401 4.484236 TGAACCAAATCGCTGCATTTTAG 58.516 39.130 0.00 2.58 0.00 1.85
1352 1402 4.022416 TGAACCAAATCGCTGCATTTTAGT 60.022 37.500 0.00 3.12 0.00 2.24
1356 1406 4.922692 CCAAATCGCTGCATTTTAGTTTCA 59.077 37.500 0.00 0.00 0.00 2.69
1357 1407 5.577945 CCAAATCGCTGCATTTTAGTTTCAT 59.422 36.000 0.00 0.00 0.00 2.57
1360 1410 6.875926 ATCGCTGCATTTTAGTTTCATTTC 57.124 33.333 0.00 0.00 0.00 2.17
1361 1411 6.012658 TCGCTGCATTTTAGTTTCATTTCT 57.987 33.333 0.00 0.00 0.00 2.52
1363 1413 7.589395 TCGCTGCATTTTAGTTTCATTTCTTA 58.411 30.769 0.00 0.00 0.00 2.10
1410 1478 3.423645 GCGATTATTGCGGACTGATTAGC 60.424 47.826 0.00 0.00 0.00 3.09
1411 1479 3.990469 CGATTATTGCGGACTGATTAGCT 59.010 43.478 0.00 0.00 0.00 3.32
1419 1488 3.005897 GCGGACTGATTAGCTAAGATCCA 59.994 47.826 19.88 11.85 0.00 3.41
1455 1524 2.443016 CTAGGCAGGGACCGCTCT 60.443 66.667 5.46 4.32 33.69 4.09
1459 1528 3.450115 GCAGGGACCGCTCTACGT 61.450 66.667 0.00 0.00 41.42 3.57
1510 1581 1.331756 GTTGCTGCCGGTGATGATTAG 59.668 52.381 1.90 0.00 0.00 1.73
1650 1721 3.198863 AGTACTTCGTGCTGTTCTACG 57.801 47.619 0.00 0.00 41.38 3.51
1655 1726 2.495409 TCGTGCTGTTCTACGAACAA 57.505 45.000 10.26 0.00 45.18 2.83
1661 1732 2.614481 GCTGTTCTACGAACAATGGGGA 60.614 50.000 10.26 0.00 0.00 4.81
1662 1733 3.262420 CTGTTCTACGAACAATGGGGAG 58.738 50.000 10.26 0.00 0.00 4.30
1663 1734 2.901192 TGTTCTACGAACAATGGGGAGA 59.099 45.455 6.94 0.00 0.00 3.71
1664 1735 3.056107 TGTTCTACGAACAATGGGGAGAG 60.056 47.826 6.94 0.00 0.00 3.20
1665 1736 3.095912 TCTACGAACAATGGGGAGAGA 57.904 47.619 0.00 0.00 0.00 3.10
1666 1737 3.024547 TCTACGAACAATGGGGAGAGAG 58.975 50.000 0.00 0.00 0.00 3.20
1672 1743 2.625639 ACAATGGGGAGAGAGAAGTGT 58.374 47.619 0.00 0.00 0.00 3.55
1677 1748 4.061131 TGGGGAGAGAGAAGTGTCATTA 57.939 45.455 0.00 0.00 0.00 1.90
1713 1784 2.691011 AGGACGAGAGGAACATAGAAGC 59.309 50.000 0.00 0.00 0.00 3.86
1715 1786 3.131400 GGACGAGAGGAACATAGAAGCTT 59.869 47.826 0.00 0.00 0.00 3.74
1723 1794 7.880105 AGAGGAACATAGAAGCTTTCTTTTTG 58.120 34.615 0.00 2.01 41.14 2.44
1731 1802 9.178758 CATAGAAGCTTTCTTTTTGGGTACTAT 57.821 33.333 0.00 0.00 41.14 2.12
1735 1806 7.833285 AGCTTTCTTTTTGGGTACTATTTGA 57.167 32.000 0.00 0.00 0.00 2.69
1736 1807 7.886338 AGCTTTCTTTTTGGGTACTATTTGAG 58.114 34.615 0.00 0.00 0.00 3.02
1737 1808 7.039714 AGCTTTCTTTTTGGGTACTATTTGAGG 60.040 37.037 0.00 0.00 0.00 3.86
1738 1809 7.039993 GCTTTCTTTTTGGGTACTATTTGAGGA 60.040 37.037 0.00 0.00 0.00 3.71
1740 1811 7.754851 TCTTTTTGGGTACTATTTGAGGAAC 57.245 36.000 0.00 0.00 0.00 3.62
1742 1813 7.947890 TCTTTTTGGGTACTATTTGAGGAACAT 59.052 33.333 0.00 0.00 0.00 2.71
1743 1814 7.696992 TTTTGGGTACTATTTGAGGAACATC 57.303 36.000 0.00 0.00 0.00 3.06
1852 2004 4.204978 GCATTCAAGAAAAGTTGTGTCACG 59.795 41.667 0.00 0.00 0.00 4.35
2105 2261 7.451501 TGTTCATGTTTGCAGATTCTTCATA 57.548 32.000 0.00 0.00 0.00 2.15
2537 2693 2.523245 TGGTTGTATCAGCATTGGCAA 58.477 42.857 0.68 0.68 44.61 4.52
2648 2804 1.005294 GCAATGTGTTCAAGCCTGCG 61.005 55.000 0.00 0.00 0.00 5.18
2655 2811 0.955428 GTTCAAGCCTGCGGATGACA 60.955 55.000 0.00 0.00 0.00 3.58
2691 2847 6.148315 TGCATCAGTTACTTCAAAGATGACTG 59.852 38.462 12.02 13.52 34.89 3.51
2699 2855 1.888512 TCAAAGATGACTGCAAAGCCC 59.111 47.619 0.00 0.00 0.00 5.19
2871 3027 0.685097 TCCTGCACCAGTACAACTCC 59.315 55.000 0.00 0.00 0.00 3.85
2909 3065 4.080299 CCAGCTAAGGTTCCCAAGACTATT 60.080 45.833 0.00 0.00 0.00 1.73
2963 3119 0.396435 AGGAGAACAATGCGGACACA 59.604 50.000 0.00 0.00 0.00 3.72
2966 3122 2.076100 GAGAACAATGCGGACACATCA 58.924 47.619 0.00 0.00 0.00 3.07
3194 3350 0.321564 CCGAAACCATGGAGAGCACA 60.322 55.000 21.47 0.00 0.00 4.57
3203 3359 2.655090 TGGAGAGCACAAACATTCCA 57.345 45.000 0.00 0.00 32.62 3.53
3467 3623 1.008424 CCGTCGGATCATCGTCCAG 60.008 63.158 4.91 0.00 38.21 3.86
3504 3660 3.845781 TGTTCTGAAGGTTTGCTCTCT 57.154 42.857 0.00 0.00 0.00 3.10
3588 3744 1.266989 GTTGCTCCCTTGTTTTCTCCG 59.733 52.381 0.00 0.00 0.00 4.63
3620 3776 1.260033 CAGCGAGCCGATGATTTCTTC 59.740 52.381 6.97 0.00 46.56 2.87
3709 3865 6.255950 AGAAAAAGAAAAGTTCGACGGAAAG 58.744 36.000 0.00 0.00 33.05 2.62
3714 3870 5.169295 AGAAAAGTTCGACGGAAAGGATAG 58.831 41.667 0.00 0.00 33.05 2.08
3763 3921 3.047796 CAAGTGTGAGCTGTTGAAATGC 58.952 45.455 0.00 0.00 0.00 3.56
3888 4046 7.771361 TGACTCTTGATTGTACCACTTTTAACA 59.229 33.333 0.00 0.00 0.00 2.41
3919 4077 5.904362 ATCAGTTCTTTTGCCCAAGATAC 57.096 39.130 0.00 0.00 32.69 2.24
3921 4079 3.081804 AGTTCTTTTGCCCAAGATACGG 58.918 45.455 0.00 0.00 32.69 4.02
3922 4080 1.459450 TCTTTTGCCCAAGATACGGC 58.541 50.000 0.00 0.00 45.92 5.68
3927 4085 3.290776 GCCCAAGATACGGCAGTAG 57.709 57.895 2.53 0.00 45.01 2.57
3937 4100 2.586258 ACGGCAGTAGCTCTGTATTG 57.414 50.000 12.71 0.00 45.23 1.90
3951 4114 5.678583 CTCTGTATTGACTTCACATGGGAT 58.321 41.667 0.00 0.00 0.00 3.85
3955 4118 6.425735 TGTATTGACTTCACATGGGATTGAT 58.574 36.000 0.00 0.00 0.00 2.57
3956 4119 5.847111 ATTGACTTCACATGGGATTGATG 57.153 39.130 0.00 0.00 0.00 3.07
3957 4120 3.018856 TGACTTCACATGGGATTGATGC 58.981 45.455 0.00 0.00 0.00 3.91
3958 4121 2.360165 GACTTCACATGGGATTGATGCC 59.640 50.000 0.00 0.00 38.98 4.40
4023 4187 2.638363 ACTCCAGGTGGACTAAAGAACC 59.362 50.000 0.00 0.00 39.78 3.62
4031 4195 4.285260 GGTGGACTAAAGAACCTCCAAGTA 59.715 45.833 0.00 0.00 37.32 2.24
4032 4196 5.480205 GTGGACTAAAGAACCTCCAAGTAG 58.520 45.833 0.00 0.00 34.53 2.57
4055 4219 1.048601 TCTTTCACCCGTCTGAAGCT 58.951 50.000 0.00 0.00 31.76 3.74
4087 4252 5.670485 TGCGGATCTGAATAATACTGTTGT 58.330 37.500 5.48 0.00 0.00 3.32
4092 4257 7.517417 CGGATCTGAATAATACTGTTGTTGAGC 60.517 40.741 0.00 0.00 0.00 4.26
4127 4292 2.281208 TGTCAGGTTTTCCGGGCG 60.281 61.111 0.00 0.00 42.53 6.13
4128 4293 3.733960 GTCAGGTTTTCCGGGCGC 61.734 66.667 0.00 0.00 46.35 6.53
4131 4296 4.589675 AGGTTTTCCGGGCGCCAA 62.590 61.111 30.85 11.79 46.35 4.52
4133 4298 3.597728 GTTTTCCGGGCGCCAACA 61.598 61.111 30.85 7.69 0.00 3.33
4138 4323 2.126110 CCGGGCGCCAACATTTTC 60.126 61.111 30.85 6.91 0.00 2.29
4158 4343 5.776173 TTCTTTTTGACGGGCTGAATTTA 57.224 34.783 0.00 0.00 0.00 1.40
4160 4345 6.339587 TCTTTTTGACGGGCTGAATTTATT 57.660 33.333 0.00 0.00 0.00 1.40
4174 4359 9.423061 GGCTGAATTTATTGTACAACTGATTTT 57.577 29.630 11.22 0.49 0.00 1.82
4211 4396 7.082700 TGATATGTTTGCGCTTTCTATCAAA 57.917 32.000 9.73 0.00 0.00 2.69
4287 4474 8.635124 CATGTTTATGCGTAAAAATCGAGTTTT 58.365 29.630 24.72 24.72 41.69 2.43
4328 4523 1.523524 CCTGCCCCATTTCATTGCC 59.476 57.895 0.00 0.00 0.00 4.52
4350 4545 4.312443 CAATGAGGCAAGAAAAACAGCAT 58.688 39.130 0.00 0.00 0.00 3.79
4396 4591 2.089980 AGCCAAAGTAGCTGAGCATTG 58.910 47.619 7.39 6.28 39.69 2.82
4402 4597 5.403466 CCAAAGTAGCTGAGCATTGAAAAAC 59.597 40.000 7.39 0.00 0.00 2.43
4403 4598 4.773323 AGTAGCTGAGCATTGAAAAACC 57.227 40.909 7.39 0.00 0.00 3.27
4404 4599 4.144297 AGTAGCTGAGCATTGAAAAACCA 58.856 39.130 7.39 0.00 0.00 3.67
4405 4600 4.584325 AGTAGCTGAGCATTGAAAAACCAA 59.416 37.500 7.39 0.00 0.00 3.67
4406 4601 3.721035 AGCTGAGCATTGAAAAACCAAC 58.279 40.909 7.39 0.00 0.00 3.77
4407 4602 3.385755 AGCTGAGCATTGAAAAACCAACT 59.614 39.130 7.39 0.00 0.00 3.16
4408 4603 4.122046 GCTGAGCATTGAAAAACCAACTT 58.878 39.130 0.00 0.00 0.00 2.66
4409 4604 4.025480 GCTGAGCATTGAAAAACCAACTTG 60.025 41.667 0.00 0.00 0.00 3.16
4410 4605 5.336150 TGAGCATTGAAAAACCAACTTGA 57.664 34.783 0.00 0.00 0.00 3.02
4411 4606 5.350633 TGAGCATTGAAAAACCAACTTGAG 58.649 37.500 0.00 0.00 0.00 3.02
4412 4607 5.105392 TGAGCATTGAAAAACCAACTTGAGT 60.105 36.000 0.00 0.00 0.00 3.41
4413 4608 6.096141 TGAGCATTGAAAAACCAACTTGAGTA 59.904 34.615 0.00 0.00 0.00 2.59
4414 4609 7.054491 AGCATTGAAAAACCAACTTGAGTAT 57.946 32.000 0.00 0.00 0.00 2.12
4415 4610 7.500141 AGCATTGAAAAACCAACTTGAGTATT 58.500 30.769 0.00 0.00 0.00 1.89
4416 4611 7.653311 AGCATTGAAAAACCAACTTGAGTATTC 59.347 33.333 0.00 0.00 0.00 1.75
4417 4612 7.095649 GCATTGAAAAACCAACTTGAGTATTCC 60.096 37.037 0.00 0.00 0.00 3.01
4418 4613 6.399639 TGAAAAACCAACTTGAGTATTCCC 57.600 37.500 0.00 0.00 0.00 3.97
4419 4614 5.894393 TGAAAAACCAACTTGAGTATTCCCA 59.106 36.000 0.00 0.00 0.00 4.37
4420 4615 6.040391 TGAAAAACCAACTTGAGTATTCCCAG 59.960 38.462 0.00 0.00 0.00 4.45
4421 4616 4.993705 AACCAACTTGAGTATTCCCAGA 57.006 40.909 0.00 0.00 0.00 3.86
4422 4617 4.559862 ACCAACTTGAGTATTCCCAGAG 57.440 45.455 0.00 0.00 0.00 3.35
4423 4618 4.168101 ACCAACTTGAGTATTCCCAGAGA 58.832 43.478 0.00 0.00 0.00 3.10
4424 4619 4.597507 ACCAACTTGAGTATTCCCAGAGAA 59.402 41.667 0.00 0.00 39.32 2.87
4425 4620 5.181748 CCAACTTGAGTATTCCCAGAGAAG 58.818 45.833 0.00 0.00 38.07 2.85
4426 4621 5.046304 CCAACTTGAGTATTCCCAGAGAAGA 60.046 44.000 0.00 0.00 38.07 2.87
4427 4622 5.930837 ACTTGAGTATTCCCAGAGAAGAG 57.069 43.478 0.00 0.00 38.07 2.85
4428 4623 5.584913 ACTTGAGTATTCCCAGAGAAGAGA 58.415 41.667 0.00 0.00 38.07 3.10
4429 4624 5.656416 ACTTGAGTATTCCCAGAGAAGAGAG 59.344 44.000 0.00 0.00 38.07 3.20
4430 4625 5.458451 TGAGTATTCCCAGAGAAGAGAGA 57.542 43.478 0.00 0.00 38.07 3.10
4431 4626 5.445069 TGAGTATTCCCAGAGAAGAGAGAG 58.555 45.833 0.00 0.00 38.07 3.20
4432 4627 4.215109 AGTATTCCCAGAGAAGAGAGAGC 58.785 47.826 0.00 0.00 38.07 4.09
4433 4628 2.917713 TTCCCAGAGAAGAGAGAGCT 57.082 50.000 0.00 0.00 0.00 4.09
4434 4629 2.917713 TCCCAGAGAAGAGAGAGCTT 57.082 50.000 0.00 0.00 0.00 3.74
4435 4630 2.455557 TCCCAGAGAAGAGAGAGCTTG 58.544 52.381 0.00 0.00 0.00 4.01
4436 4631 1.134729 CCCAGAGAAGAGAGAGCTTGC 60.135 57.143 0.00 0.00 0.00 4.01
4437 4632 1.826720 CCAGAGAAGAGAGAGCTTGCT 59.173 52.381 0.00 0.00 0.00 3.91
4438 4633 2.234414 CCAGAGAAGAGAGAGCTTGCTT 59.766 50.000 0.00 0.00 0.00 3.91
4439 4634 3.255725 CAGAGAAGAGAGAGCTTGCTTG 58.744 50.000 0.00 0.00 0.00 4.01
4440 4635 2.899256 AGAGAAGAGAGAGCTTGCTTGT 59.101 45.455 0.00 0.00 0.00 3.16
4441 4636 2.995258 GAGAAGAGAGAGCTTGCTTGTG 59.005 50.000 0.00 0.00 0.00 3.33
4442 4637 2.368221 AGAAGAGAGAGCTTGCTTGTGT 59.632 45.455 0.00 0.00 0.00 3.72
4443 4638 3.576118 AGAAGAGAGAGCTTGCTTGTGTA 59.424 43.478 0.00 0.00 0.00 2.90
4444 4639 3.311486 AGAGAGAGCTTGCTTGTGTAC 57.689 47.619 0.00 0.00 0.00 2.90
4445 4640 1.989165 GAGAGAGCTTGCTTGTGTACG 59.011 52.381 0.00 0.00 0.00 3.67
4446 4641 0.440371 GAGAGCTTGCTTGTGTACGC 59.560 55.000 0.00 0.00 0.00 4.42
4447 4642 1.130613 GAGCTTGCTTGTGTACGCG 59.869 57.895 3.53 3.53 0.00 6.01
4448 4643 1.557443 GAGCTTGCTTGTGTACGCGT 61.557 55.000 19.17 19.17 0.00 6.01
4449 4644 0.319211 AGCTTGCTTGTGTACGCGTA 60.319 50.000 16.41 16.41 0.00 4.42
4450 4645 0.093026 GCTTGCTTGTGTACGCGTAG 59.907 55.000 21.25 10.70 0.00 3.51
4465 4660 2.478547 CGTAGCGTTTGGGTGTTTTT 57.521 45.000 0.00 0.00 0.00 1.94
4466 4661 2.377880 CGTAGCGTTTGGGTGTTTTTC 58.622 47.619 0.00 0.00 0.00 2.29
4467 4662 2.032426 CGTAGCGTTTGGGTGTTTTTCT 59.968 45.455 0.00 0.00 0.00 2.52
4468 4663 3.487879 CGTAGCGTTTGGGTGTTTTTCTT 60.488 43.478 0.00 0.00 0.00 2.52
4469 4664 3.159353 AGCGTTTGGGTGTTTTTCTTC 57.841 42.857 0.00 0.00 0.00 2.87
4470 4665 2.159156 AGCGTTTGGGTGTTTTTCTTCC 60.159 45.455 0.00 0.00 0.00 3.46
4471 4666 2.816689 CGTTTGGGTGTTTTTCTTCCC 58.183 47.619 0.00 0.00 40.26 3.97
4472 4667 2.796735 CGTTTGGGTGTTTTTCTTCCCG 60.797 50.000 0.00 0.00 42.54 5.14
4473 4668 2.146920 TTGGGTGTTTTTCTTCCCGT 57.853 45.000 0.00 0.00 42.54 5.28
4474 4669 2.146920 TGGGTGTTTTTCTTCCCGTT 57.853 45.000 0.00 0.00 42.54 4.44
4475 4670 2.025898 TGGGTGTTTTTCTTCCCGTTC 58.974 47.619 0.00 0.00 42.54 3.95
4476 4671 2.025898 GGGTGTTTTTCTTCCCGTTCA 58.974 47.619 0.00 0.00 0.00 3.18
4477 4672 2.223641 GGGTGTTTTTCTTCCCGTTCAC 60.224 50.000 0.00 0.00 0.00 3.18
4478 4673 2.424246 GGTGTTTTTCTTCCCGTTCACA 59.576 45.455 0.00 0.00 0.00 3.58
4479 4674 3.488553 GGTGTTTTTCTTCCCGTTCACAG 60.489 47.826 0.00 0.00 0.00 3.66
4480 4675 3.375922 GTGTTTTTCTTCCCGTTCACAGA 59.624 43.478 0.00 0.00 0.00 3.41
4481 4676 4.036380 GTGTTTTTCTTCCCGTTCACAGAT 59.964 41.667 0.00 0.00 0.00 2.90
4482 4677 4.642885 TGTTTTTCTTCCCGTTCACAGATT 59.357 37.500 0.00 0.00 0.00 2.40
4483 4678 5.126384 TGTTTTTCTTCCCGTTCACAGATTT 59.874 36.000 0.00 0.00 0.00 2.17
4484 4679 5.432885 TTTTCTTCCCGTTCACAGATTTC 57.567 39.130 0.00 0.00 0.00 2.17
4485 4680 4.351874 TTCTTCCCGTTCACAGATTTCT 57.648 40.909 0.00 0.00 0.00 2.52
4486 4681 3.926616 TCTTCCCGTTCACAGATTTCTC 58.073 45.455 0.00 0.00 0.00 2.87
4487 4682 3.323691 TCTTCCCGTTCACAGATTTCTCA 59.676 43.478 0.00 0.00 0.00 3.27
4488 4683 3.319137 TCCCGTTCACAGATTTCTCAG 57.681 47.619 0.00 0.00 0.00 3.35
4489 4684 2.028112 TCCCGTTCACAGATTTCTCAGG 60.028 50.000 0.00 0.00 0.00 3.86
4490 4685 2.350522 CCGTTCACAGATTTCTCAGGG 58.649 52.381 0.00 0.00 0.00 4.45
4491 4686 2.028112 CCGTTCACAGATTTCTCAGGGA 60.028 50.000 0.00 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.828925 GCGTGCCTCCTCTCCAGC 62.829 72.222 0.00 0.00 0.00 4.85
1 2 4.504916 CGCGTGCCTCCTCTCCAG 62.505 72.222 0.00 0.00 0.00 3.86
17 18 4.796231 CTTCCTCCCGTCACCGCG 62.796 72.222 0.00 0.00 0.00 6.46
18 19 2.444700 TTTCTTCCTCCCGTCACCGC 62.445 60.000 0.00 0.00 0.00 5.68
19 20 0.034337 TTTTCTTCCTCCCGTCACCG 59.966 55.000 0.00 0.00 0.00 4.94
20 21 1.071857 ACTTTTCTTCCTCCCGTCACC 59.928 52.381 0.00 0.00 0.00 4.02
21 22 2.143925 CACTTTTCTTCCTCCCGTCAC 58.856 52.381 0.00 0.00 0.00 3.67
22 23 1.071699 CCACTTTTCTTCCTCCCGTCA 59.928 52.381 0.00 0.00 0.00 4.35
23 24 1.610886 CCCACTTTTCTTCCTCCCGTC 60.611 57.143 0.00 0.00 0.00 4.79
24 25 0.400594 CCCACTTTTCTTCCTCCCGT 59.599 55.000 0.00 0.00 0.00 5.28
25 26 0.322546 CCCCACTTTTCTTCCTCCCG 60.323 60.000 0.00 0.00 0.00 5.14
26 27 1.004862 CTCCCCACTTTTCTTCCTCCC 59.995 57.143 0.00 0.00 0.00 4.30
27 28 1.985895 TCTCCCCACTTTTCTTCCTCC 59.014 52.381 0.00 0.00 0.00 4.30
28 29 2.907042 TCTCTCCCCACTTTTCTTCCTC 59.093 50.000 0.00 0.00 0.00 3.71
29 30 2.909662 CTCTCTCCCCACTTTTCTTCCT 59.090 50.000 0.00 0.00 0.00 3.36
30 31 2.907042 TCTCTCTCCCCACTTTTCTTCC 59.093 50.000 0.00 0.00 0.00 3.46
31 32 3.835395 TCTCTCTCTCCCCACTTTTCTTC 59.165 47.826 0.00 0.00 0.00 2.87
32 33 3.837731 CTCTCTCTCTCCCCACTTTTCTT 59.162 47.826 0.00 0.00 0.00 2.52
33 34 3.076785 TCTCTCTCTCTCCCCACTTTTCT 59.923 47.826 0.00 0.00 0.00 2.52
34 35 3.194755 GTCTCTCTCTCTCCCCACTTTTC 59.805 52.174 0.00 0.00 0.00 2.29
35 36 3.169908 GTCTCTCTCTCTCCCCACTTTT 58.830 50.000 0.00 0.00 0.00 2.27
36 37 2.815158 GTCTCTCTCTCTCCCCACTTT 58.185 52.381 0.00 0.00 0.00 2.66
37 38 1.340600 CGTCTCTCTCTCTCCCCACTT 60.341 57.143 0.00 0.00 0.00 3.16
38 39 0.254747 CGTCTCTCTCTCTCCCCACT 59.745 60.000 0.00 0.00 0.00 4.00
39 40 0.253610 TCGTCTCTCTCTCTCCCCAC 59.746 60.000 0.00 0.00 0.00 4.61
40 41 0.992695 TTCGTCTCTCTCTCTCCCCA 59.007 55.000 0.00 0.00 0.00 4.96
41 42 2.131776 TTTCGTCTCTCTCTCTCCCC 57.868 55.000 0.00 0.00 0.00 4.81
42 43 2.425668 CCTTTTCGTCTCTCTCTCTCCC 59.574 54.545 0.00 0.00 0.00 4.30
43 44 3.086282 ACCTTTTCGTCTCTCTCTCTCC 58.914 50.000 0.00 0.00 0.00 3.71
44 45 4.481463 CAACCTTTTCGTCTCTCTCTCTC 58.519 47.826 0.00 0.00 0.00 3.20
45 46 3.257127 CCAACCTTTTCGTCTCTCTCTCT 59.743 47.826 0.00 0.00 0.00 3.10
46 47 3.580731 CCAACCTTTTCGTCTCTCTCTC 58.419 50.000 0.00 0.00 0.00 3.20
47 48 2.300437 CCCAACCTTTTCGTCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
48 49 2.613223 CCCCAACCTTTTCGTCTCTCTC 60.613 54.545 0.00 0.00 0.00 3.20
49 50 1.348036 CCCCAACCTTTTCGTCTCTCT 59.652 52.381 0.00 0.00 0.00 3.10
50 51 1.346722 TCCCCAACCTTTTCGTCTCTC 59.653 52.381 0.00 0.00 0.00 3.20
51 52 1.348036 CTCCCCAACCTTTTCGTCTCT 59.652 52.381 0.00 0.00 0.00 3.10
52 53 1.346722 TCTCCCCAACCTTTTCGTCTC 59.653 52.381 0.00 0.00 0.00 3.36
53 54 1.348036 CTCTCCCCAACCTTTTCGTCT 59.652 52.381 0.00 0.00 0.00 4.18
54 55 1.346722 TCTCTCCCCAACCTTTTCGTC 59.653 52.381 0.00 0.00 0.00 4.20
55 56 1.348036 CTCTCTCCCCAACCTTTTCGT 59.652 52.381 0.00 0.00 0.00 3.85
56 57 1.623811 TCTCTCTCCCCAACCTTTTCG 59.376 52.381 0.00 0.00 0.00 3.46
57 58 3.328050 TCTTCTCTCTCCCCAACCTTTTC 59.672 47.826 0.00 0.00 0.00 2.29
58 59 3.327439 TCTTCTCTCTCCCCAACCTTTT 58.673 45.455 0.00 0.00 0.00 2.27
59 60 2.991580 TCTTCTCTCTCCCCAACCTTT 58.008 47.619 0.00 0.00 0.00 3.11
60 61 2.723530 TCTTCTCTCTCCCCAACCTT 57.276 50.000 0.00 0.00 0.00 3.50
61 62 2.959421 ATCTTCTCTCTCCCCAACCT 57.041 50.000 0.00 0.00 0.00 3.50
62 63 4.488770 AGATATCTTCTCTCTCCCCAACC 58.511 47.826 0.00 0.00 0.00 3.77
63 64 5.722021 GAGATATCTTCTCTCTCCCCAAC 57.278 47.826 6.70 0.00 46.33 3.77
74 75 4.832266 CCTACCTGCAGTGAGATATCTTCT 59.168 45.833 13.81 6.16 37.41 2.85
75 76 4.021544 CCCTACCTGCAGTGAGATATCTTC 60.022 50.000 13.81 3.89 0.00 2.87
76 77 3.900601 CCCTACCTGCAGTGAGATATCTT 59.099 47.826 13.81 0.00 0.00 2.40
77 78 3.505386 CCCTACCTGCAGTGAGATATCT 58.495 50.000 13.81 4.47 0.00 1.98
78 79 2.028567 GCCCTACCTGCAGTGAGATATC 60.029 54.545 13.81 0.00 0.00 1.63
79 80 1.974236 GCCCTACCTGCAGTGAGATAT 59.026 52.381 13.81 0.00 0.00 1.63
80 81 1.342975 TGCCCTACCTGCAGTGAGATA 60.343 52.381 13.81 0.00 34.05 1.98
81 82 0.618680 TGCCCTACCTGCAGTGAGAT 60.619 55.000 13.81 0.00 34.05 2.75
82 83 0.835971 TTGCCCTACCTGCAGTGAGA 60.836 55.000 13.81 0.00 40.35 3.27
83 84 0.674895 GTTGCCCTACCTGCAGTGAG 60.675 60.000 13.81 8.99 40.35 3.51
84 85 1.374947 GTTGCCCTACCTGCAGTGA 59.625 57.895 13.81 0.00 40.35 3.41
85 86 2.034879 CGTTGCCCTACCTGCAGTG 61.035 63.158 13.81 6.81 40.35 3.66
86 87 2.347490 CGTTGCCCTACCTGCAGT 59.653 61.111 13.81 3.45 40.35 4.40
87 88 3.127533 GCGTTGCCCTACCTGCAG 61.128 66.667 6.78 6.78 40.35 4.41
88 89 3.190738 AAGCGTTGCCCTACCTGCA 62.191 57.895 0.00 0.00 36.84 4.41
89 90 2.359975 AAGCGTTGCCCTACCTGC 60.360 61.111 0.00 0.00 0.00 4.85
90 91 3.578456 CAAGCGTTGCCCTACCTG 58.422 61.111 0.00 0.00 0.00 4.00
99 100 0.587737 TCGTCGTTTTGCAAGCGTTG 60.588 50.000 19.77 14.85 0.00 4.10
100 101 0.097325 TTCGTCGTTTTGCAAGCGTT 59.903 45.000 19.77 0.00 0.00 4.84
101 102 0.097325 TTTCGTCGTTTTGCAAGCGT 59.903 45.000 19.77 0.00 0.00 5.07
102 103 1.394697 ATTTCGTCGTTTTGCAAGCG 58.605 45.000 16.15 16.15 0.00 4.68
103 104 3.181553 GCTAATTTCGTCGTTTTGCAAGC 60.182 43.478 0.00 0.00 0.00 4.01
104 105 3.360758 GGCTAATTTCGTCGTTTTGCAAG 59.639 43.478 0.00 0.00 0.00 4.01
105 106 3.301706 GGCTAATTTCGTCGTTTTGCAA 58.698 40.909 0.00 0.00 0.00 4.08
106 107 2.350964 GGGCTAATTTCGTCGTTTTGCA 60.351 45.455 11.19 0.00 0.00 4.08
107 108 2.247637 GGGCTAATTTCGTCGTTTTGC 58.752 47.619 0.00 0.00 0.00 3.68
108 109 2.414957 GGGGGCTAATTTCGTCGTTTTG 60.415 50.000 0.00 0.00 0.00 2.44
109 110 1.814394 GGGGGCTAATTTCGTCGTTTT 59.186 47.619 0.00 0.00 0.00 2.43
110 111 1.456296 GGGGGCTAATTTCGTCGTTT 58.544 50.000 0.00 0.00 0.00 3.60
111 112 3.164026 GGGGGCTAATTTCGTCGTT 57.836 52.632 0.00 0.00 0.00 3.85
112 113 4.948257 GGGGGCTAATTTCGTCGT 57.052 55.556 0.00 0.00 0.00 4.34
136 137 3.868200 AAACGCAGGAAGCTGGGGG 62.868 63.158 0.00 0.00 42.61 5.40
137 138 2.282462 AAACGCAGGAAGCTGGGG 60.282 61.111 0.00 0.00 42.61 4.96
138 139 2.629656 CCAAACGCAGGAAGCTGGG 61.630 63.158 0.00 0.00 42.61 4.45
139 140 2.629656 CCCAAACGCAGGAAGCTGG 61.630 63.158 0.00 0.00 42.61 4.85
140 141 1.455383 AACCCAAACGCAGGAAGCTG 61.455 55.000 0.00 0.00 42.61 4.24
141 142 1.152756 AACCCAAACGCAGGAAGCT 60.153 52.632 0.00 0.00 42.61 3.74
142 143 1.007387 CAACCCAAACGCAGGAAGC 60.007 57.895 0.00 0.00 40.87 3.86
143 144 1.007387 GCAACCCAAACGCAGGAAG 60.007 57.895 0.00 0.00 0.00 3.46
144 145 2.840066 CGCAACCCAAACGCAGGAA 61.840 57.895 0.00 0.00 0.00 3.36
145 146 3.283684 CGCAACCCAAACGCAGGA 61.284 61.111 0.00 0.00 0.00 3.86
146 147 4.341502 CCGCAACCCAAACGCAGG 62.342 66.667 0.00 0.00 0.00 4.85
147 148 3.132481 AACCGCAACCCAAACGCAG 62.132 57.895 0.00 0.00 0.00 5.18
148 149 3.141488 AACCGCAACCCAAACGCA 61.141 55.556 0.00 0.00 0.00 5.24
149 150 2.656973 CAACCGCAACCCAAACGC 60.657 61.111 0.00 0.00 0.00 4.84
150 151 2.656973 GCAACCGCAACCCAAACG 60.657 61.111 0.00 0.00 38.36 3.60
151 152 2.279851 GGCAACCGCAACCCAAAC 60.280 61.111 0.00 0.00 41.24 2.93
152 153 3.905678 CGGCAACCGCAACCCAAA 61.906 61.111 0.00 0.00 41.17 3.28
162 163 2.304901 AAAAACTGGTGCCGGCAACC 62.305 55.000 40.08 34.20 31.49 3.77
163 164 1.142965 AAAAACTGGTGCCGGCAAC 59.857 52.632 37.68 37.68 0.00 4.17
164 165 1.142748 CAAAAACTGGTGCCGGCAA 59.857 52.632 34.66 16.92 0.00 4.52
165 166 1.608717 AACAAAAACTGGTGCCGGCA 61.609 50.000 29.03 29.03 0.00 5.69
166 167 0.461163 AAACAAAAACTGGTGCCGGC 60.461 50.000 22.73 22.73 0.00 6.13
167 168 2.017138 AAAACAAAAACTGGTGCCGG 57.983 45.000 0.00 0.00 0.00 6.13
168 169 3.738791 GGATAAAACAAAAACTGGTGCCG 59.261 43.478 0.00 0.00 0.00 5.69
169 170 3.738791 CGGATAAAACAAAAACTGGTGCC 59.261 43.478 0.00 0.00 0.00 5.01
170 171 3.738791 CCGGATAAAACAAAAACTGGTGC 59.261 43.478 0.00 0.00 0.00 5.01
171 172 3.738791 GCCGGATAAAACAAAAACTGGTG 59.261 43.478 5.05 0.00 0.00 4.17
172 173 3.551250 CGCCGGATAAAACAAAAACTGGT 60.551 43.478 5.05 0.00 0.00 4.00
173 174 2.983803 CGCCGGATAAAACAAAAACTGG 59.016 45.455 5.05 0.00 0.00 4.00
174 175 3.891324 TCGCCGGATAAAACAAAAACTG 58.109 40.909 5.05 0.00 0.00 3.16
175 176 4.571372 TTCGCCGGATAAAACAAAAACT 57.429 36.364 5.05 0.00 0.00 2.66
176 177 5.638660 TTTTCGCCGGATAAAACAAAAAC 57.361 34.783 5.05 0.00 0.00 2.43
177 178 5.234543 CCTTTTTCGCCGGATAAAACAAAAA 59.765 36.000 5.05 4.14 0.00 1.94
178 179 4.745620 CCTTTTTCGCCGGATAAAACAAAA 59.254 37.500 5.05 0.00 0.00 2.44
179 180 4.037684 TCCTTTTTCGCCGGATAAAACAAA 59.962 37.500 5.05 0.00 0.00 2.83
180 181 3.568853 TCCTTTTTCGCCGGATAAAACAA 59.431 39.130 5.05 0.00 0.00 2.83
181 182 3.147629 TCCTTTTTCGCCGGATAAAACA 58.852 40.909 5.05 1.70 0.00 2.83
182 183 3.437741 TCTCCTTTTTCGCCGGATAAAAC 59.562 43.478 5.05 0.00 0.00 2.43
183 184 3.677190 TCTCCTTTTTCGCCGGATAAAA 58.323 40.909 5.05 8.06 0.00 1.52
184 185 3.267483 CTCTCCTTTTTCGCCGGATAAA 58.733 45.455 5.05 0.61 0.00 1.40
185 186 2.235402 ACTCTCCTTTTTCGCCGGATAA 59.765 45.455 5.05 0.00 0.00 1.75
186 187 1.829222 ACTCTCCTTTTTCGCCGGATA 59.171 47.619 5.05 0.00 0.00 2.59
187 188 0.613777 ACTCTCCTTTTTCGCCGGAT 59.386 50.000 5.05 0.00 0.00 4.18
188 189 0.395312 AACTCTCCTTTTTCGCCGGA 59.605 50.000 5.05 0.00 0.00 5.14
189 190 1.069227 CAAACTCTCCTTTTTCGCCGG 60.069 52.381 0.00 0.00 0.00 6.13
190 191 1.069227 CCAAACTCTCCTTTTTCGCCG 60.069 52.381 0.00 0.00 0.00 6.46
191 192 1.269723 CCCAAACTCTCCTTTTTCGCC 59.730 52.381 0.00 0.00 0.00 5.54
192 193 1.269723 CCCCAAACTCTCCTTTTTCGC 59.730 52.381 0.00 0.00 0.00 4.70
193 194 2.293399 CACCCCAAACTCTCCTTTTTCG 59.707 50.000 0.00 0.00 0.00 3.46
194 195 3.318275 GTCACCCCAAACTCTCCTTTTTC 59.682 47.826 0.00 0.00 0.00 2.29
195 196 3.296854 GTCACCCCAAACTCTCCTTTTT 58.703 45.455 0.00 0.00 0.00 1.94
196 197 2.748465 CGTCACCCCAAACTCTCCTTTT 60.748 50.000 0.00 0.00 0.00 2.27
197 198 1.202770 CGTCACCCCAAACTCTCCTTT 60.203 52.381 0.00 0.00 0.00 3.11
198 199 0.396811 CGTCACCCCAAACTCTCCTT 59.603 55.000 0.00 0.00 0.00 3.36
199 200 0.471211 TCGTCACCCCAAACTCTCCT 60.471 55.000 0.00 0.00 0.00 3.69
200 201 0.037232 CTCGTCACCCCAAACTCTCC 60.037 60.000 0.00 0.00 0.00 3.71
201 202 0.680061 ACTCGTCACCCCAAACTCTC 59.320 55.000 0.00 0.00 0.00 3.20
202 203 0.393077 CACTCGTCACCCCAAACTCT 59.607 55.000 0.00 0.00 0.00 3.24
203 204 0.602905 CCACTCGTCACCCCAAACTC 60.603 60.000 0.00 0.00 0.00 3.01
204 205 1.450211 CCACTCGTCACCCCAAACT 59.550 57.895 0.00 0.00 0.00 2.66
205 206 1.599797 CCCACTCGTCACCCCAAAC 60.600 63.158 0.00 0.00 0.00 2.93
206 207 1.346479 TTCCCACTCGTCACCCCAAA 61.346 55.000 0.00 0.00 0.00 3.28
207 208 1.764571 CTTCCCACTCGTCACCCCAA 61.765 60.000 0.00 0.00 0.00 4.12
208 209 2.122769 TTCCCACTCGTCACCCCA 60.123 61.111 0.00 0.00 0.00 4.96
209 210 1.265454 ATCTTCCCACTCGTCACCCC 61.265 60.000 0.00 0.00 0.00 4.95
210 211 0.613777 AATCTTCCCACTCGTCACCC 59.386 55.000 0.00 0.00 0.00 4.61
211 212 2.474410 AAATCTTCCCACTCGTCACC 57.526 50.000 0.00 0.00 0.00 4.02
212 213 3.564225 ACAAAAATCTTCCCACTCGTCAC 59.436 43.478 0.00 0.00 0.00 3.67
213 214 3.813166 GACAAAAATCTTCCCACTCGTCA 59.187 43.478 0.00 0.00 0.00 4.35
214 215 4.065789 AGACAAAAATCTTCCCACTCGTC 58.934 43.478 0.00 0.00 0.00 4.20
215 216 3.815401 CAGACAAAAATCTTCCCACTCGT 59.185 43.478 0.00 0.00 0.00 4.18
216 217 3.365364 GCAGACAAAAATCTTCCCACTCG 60.365 47.826 0.00 0.00 0.00 4.18
217 218 3.057245 GGCAGACAAAAATCTTCCCACTC 60.057 47.826 0.00 0.00 0.00 3.51
218 219 2.893489 GGCAGACAAAAATCTTCCCACT 59.107 45.455 0.00 0.00 0.00 4.00
219 220 2.351738 CGGCAGACAAAAATCTTCCCAC 60.352 50.000 0.00 0.00 28.87 4.61
220 221 1.885887 CGGCAGACAAAAATCTTCCCA 59.114 47.619 0.00 0.00 28.87 4.37
221 222 1.202348 CCGGCAGACAAAAATCTTCCC 59.798 52.381 0.00 0.00 28.87 3.97
222 223 1.402852 GCCGGCAGACAAAAATCTTCC 60.403 52.381 24.80 0.00 0.00 3.46
223 224 1.729149 CGCCGGCAGACAAAAATCTTC 60.729 52.381 28.98 0.00 0.00 2.87
224 225 0.240945 CGCCGGCAGACAAAAATCTT 59.759 50.000 28.98 0.00 0.00 2.40
225 226 1.875963 CGCCGGCAGACAAAAATCT 59.124 52.632 28.98 0.00 0.00 2.40
226 227 1.801512 GCGCCGGCAGACAAAAATC 60.802 57.895 28.98 0.08 39.62 2.17
227 228 2.258286 GCGCCGGCAGACAAAAAT 59.742 55.556 28.98 0.00 39.62 1.82
228 229 4.320928 CGCGCCGGCAGACAAAAA 62.321 61.111 28.98 0.00 39.92 1.94
234 235 4.673298 TTTTCTCGCGCCGGCAGA 62.673 61.111 28.98 23.24 39.92 4.26
235 236 3.651480 CTTTTTCTCGCGCCGGCAG 62.651 63.158 28.98 20.04 39.92 4.85
236 237 3.722295 CTTTTTCTCGCGCCGGCA 61.722 61.111 28.98 5.90 39.92 5.69
237 238 3.723348 ACTTTTTCTCGCGCCGGC 61.723 61.111 19.07 19.07 0.00 6.13
238 239 2.173382 CACTTTTTCTCGCGCCGG 59.827 61.111 0.00 0.00 0.00 6.13
239 240 2.499732 GCACTTTTTCTCGCGCCG 60.500 61.111 0.00 0.00 0.00 6.46
240 241 2.126850 GGCACTTTTTCTCGCGCC 60.127 61.111 0.00 0.00 0.00 6.53
241 242 1.441016 CAGGCACTTTTTCTCGCGC 60.441 57.895 0.00 0.00 34.60 6.86
242 243 1.207593 CCAGGCACTTTTTCTCGCG 59.792 57.895 0.00 0.00 34.60 5.87
243 244 1.581447 CCCAGGCACTTTTTCTCGC 59.419 57.895 0.00 0.00 34.60 5.03
244 245 1.244019 CCCCCAGGCACTTTTTCTCG 61.244 60.000 0.00 0.00 34.60 4.04
245 246 0.112412 TCCCCCAGGCACTTTTTCTC 59.888 55.000 0.00 0.00 34.60 2.87
246 247 0.786435 ATCCCCCAGGCACTTTTTCT 59.214 50.000 0.00 0.00 34.60 2.52
247 248 1.644509 AATCCCCCAGGCACTTTTTC 58.355 50.000 0.00 0.00 34.60 2.29
248 249 2.116869 AAATCCCCCAGGCACTTTTT 57.883 45.000 0.00 0.00 34.60 1.94
249 250 2.111792 ACTAAATCCCCCAGGCACTTTT 59.888 45.455 0.00 0.00 34.60 2.27
250 251 1.716503 ACTAAATCCCCCAGGCACTTT 59.283 47.619 0.00 0.00 34.60 2.66
251 252 1.005924 CACTAAATCCCCCAGGCACTT 59.994 52.381 0.00 0.00 34.60 3.16
252 253 0.625849 CACTAAATCCCCCAGGCACT 59.374 55.000 0.00 0.00 43.88 4.40
253 254 0.395724 CCACTAAATCCCCCAGGCAC 60.396 60.000 0.00 0.00 0.00 5.01
254 255 1.580066 CCCACTAAATCCCCCAGGCA 61.580 60.000 0.00 0.00 0.00 4.75
255 256 1.230212 CCCACTAAATCCCCCAGGC 59.770 63.158 0.00 0.00 0.00 4.85
256 257 1.655114 CCCCCACTAAATCCCCCAGG 61.655 65.000 0.00 0.00 0.00 4.45
257 258 1.930520 CCCCCACTAAATCCCCCAG 59.069 63.158 0.00 0.00 0.00 4.45
258 259 4.197511 CCCCCACTAAATCCCCCA 57.802 61.111 0.00 0.00 0.00 4.96
275 276 4.925861 GAGCATCTCCAGCCGGCC 62.926 72.222 26.15 4.59 0.00 6.13
284 285 7.453307 GGCAATACCAAGACTTAGAGCATCTC 61.453 46.154 0.00 0.00 41.93 2.75
285 286 5.686124 GGCAATACCAAGACTTAGAGCATCT 60.686 44.000 0.00 0.00 44.44 2.90
286 287 4.513318 GGCAATACCAAGACTTAGAGCATC 59.487 45.833 0.00 0.00 38.86 3.91
287 288 4.455606 GGCAATACCAAGACTTAGAGCAT 58.544 43.478 0.00 0.00 38.86 3.79
288 289 3.873910 GGCAATACCAAGACTTAGAGCA 58.126 45.455 0.00 0.00 38.86 4.26
300 301 2.697751 GGCAATACCATTGGCAATACCA 59.302 45.455 13.23 0.81 42.99 3.25
301 302 3.385193 GGCAATACCATTGGCAATACC 57.615 47.619 13.23 2.66 43.47 2.73
318 319 4.548451 TTGTCAAATATTGGCATTGGCA 57.452 36.364 9.11 9.11 45.87 4.92
319 320 4.260866 GCATTGTCAAATATTGGCATTGGC 60.261 41.667 16.55 2.73 45.87 4.52
320 321 4.025563 CGCATTGTCAAATATTGGCATTGG 60.026 41.667 16.55 7.30 45.87 3.16
321 322 4.551217 GCGCATTGTCAAATATTGGCATTG 60.551 41.667 0.30 12.65 45.87 2.82
322 323 3.556775 GCGCATTGTCAAATATTGGCATT 59.443 39.130 0.30 0.00 45.87 3.56
323 324 3.125316 GCGCATTGTCAAATATTGGCAT 58.875 40.909 0.30 0.00 45.87 4.40
324 325 2.094338 TGCGCATTGTCAAATATTGGCA 60.094 40.909 5.66 0.00 44.76 4.92
325 326 2.538437 TGCGCATTGTCAAATATTGGC 58.462 42.857 5.66 0.00 35.37 4.52
326 327 5.494618 CAAATGCGCATTGTCAAATATTGG 58.505 37.500 34.48 4.65 0.00 3.16
327 328 5.494618 CCAAATGCGCATTGTCAAATATTG 58.505 37.500 34.48 23.68 0.00 1.90
328 329 4.034279 GCCAAATGCGCATTGTCAAATATT 59.966 37.500 34.48 14.04 0.00 1.28
329 330 3.556775 GCCAAATGCGCATTGTCAAATAT 59.443 39.130 34.48 14.79 0.00 1.28
330 331 2.928757 GCCAAATGCGCATTGTCAAATA 59.071 40.909 34.48 0.00 0.00 1.40
331 332 1.733360 GCCAAATGCGCATTGTCAAAT 59.267 42.857 34.48 16.30 0.00 2.32
332 333 1.146637 GCCAAATGCGCATTGTCAAA 58.853 45.000 34.48 0.00 0.00 2.69
333 334 0.033090 TGCCAAATGCGCATTGTCAA 59.967 45.000 34.48 18.62 45.60 3.18
334 335 0.033090 TTGCCAAATGCGCATTGTCA 59.967 45.000 34.48 26.55 45.60 3.58
335 336 0.717224 CTTGCCAAATGCGCATTGTC 59.283 50.000 34.48 24.55 45.60 3.18
336 337 1.293267 GCTTGCCAAATGCGCATTGT 61.293 50.000 34.48 21.31 45.60 2.71
337 338 1.422269 GCTTGCCAAATGCGCATTG 59.578 52.632 34.48 25.65 45.60 2.82
338 339 1.742510 GGCTTGCCAAATGCGCATT 60.743 52.632 29.36 29.36 45.60 3.56
339 340 2.125431 GGCTTGCCAAATGCGCAT 60.125 55.556 19.28 19.28 45.60 4.73
340 341 2.655526 TTTGGCTTGCCAAATGCGCA 62.656 50.000 29.24 14.96 45.60 6.09
341 342 1.300266 ATTTGGCTTGCCAAATGCGC 61.300 50.000 36.84 0.00 45.20 6.09
342 343 2.007360 TATTTGGCTTGCCAAATGCG 57.993 45.000 40.40 0.00 46.02 4.73
343 344 2.540931 CGATATTTGGCTTGCCAAATGC 59.459 45.455 40.40 33.02 46.02 3.56
344 345 3.125316 CCGATATTTGGCTTGCCAAATG 58.875 45.455 40.40 30.23 46.02 2.32
346 347 2.957491 CCGATATTTGGCTTGCCAAA 57.043 45.000 33.01 33.01 42.68 3.28
355 356 3.814842 TGAATACAGCTGCCGATATTTGG 59.185 43.478 15.27 0.00 0.00 3.28
356 357 4.319766 GGTGAATACAGCTGCCGATATTTG 60.320 45.833 15.27 0.00 40.78 2.32
357 358 3.815401 GGTGAATACAGCTGCCGATATTT 59.185 43.478 15.27 0.00 40.78 1.40
358 359 3.403038 GGTGAATACAGCTGCCGATATT 58.597 45.455 15.27 10.28 40.78 1.28
359 360 2.610479 CGGTGAATACAGCTGCCGATAT 60.610 50.000 19.62 5.65 41.45 1.63
360 361 1.269569 CGGTGAATACAGCTGCCGATA 60.270 52.381 19.62 3.45 41.45 2.92
361 362 0.530650 CGGTGAATACAGCTGCCGAT 60.531 55.000 19.62 6.46 41.45 4.18
362 363 1.153647 CGGTGAATACAGCTGCCGA 60.154 57.895 19.62 4.31 41.45 5.54
363 364 2.813179 GCGGTGAATACAGCTGCCG 61.813 63.158 19.91 19.91 43.44 5.69
364 365 2.813179 CGCGGTGAATACAGCTGCC 61.813 63.158 15.27 4.52 44.40 4.85
365 366 2.703409 CGCGGTGAATACAGCTGC 59.297 61.111 15.27 0.00 44.40 5.25
366 367 2.813179 GCCGCGGTGAATACAGCTG 61.813 63.158 28.70 13.48 44.40 4.24
367 368 2.511600 GCCGCGGTGAATACAGCT 60.512 61.111 28.70 0.00 44.40 4.24
368 369 3.925238 CGCCGCGGTGAATACAGC 61.925 66.667 34.65 10.73 43.36 4.40
369 370 3.261951 CCGCCGCGGTGAATACAG 61.262 66.667 38.89 17.87 42.73 2.74
384 385 3.673956 TTACCTGCCATGGTCGCCG 62.674 63.158 14.67 0.00 41.22 6.46
385 386 1.819632 CTTACCTGCCATGGTCGCC 60.820 63.158 14.67 0.00 41.22 5.54
386 387 2.472909 GCTTACCTGCCATGGTCGC 61.473 63.158 14.67 0.00 41.22 5.19
387 388 0.464036 TAGCTTACCTGCCATGGTCG 59.536 55.000 14.67 4.46 41.22 4.79
388 389 1.806623 CGTAGCTTACCTGCCATGGTC 60.807 57.143 14.67 6.41 41.22 4.02
389 390 0.178068 CGTAGCTTACCTGCCATGGT 59.822 55.000 14.67 0.00 43.66 3.55
390 391 2.992089 CGTAGCTTACCTGCCATGG 58.008 57.895 7.63 7.63 0.00 3.66
529 530 3.892162 CGTTGGGGTGGTGGGGAA 61.892 66.667 0.00 0.00 0.00 3.97
530 531 4.902258 TCGTTGGGGTGGTGGGGA 62.902 66.667 0.00 0.00 0.00 4.81
531 532 2.930777 TTTTCGTTGGGGTGGTGGGG 62.931 60.000 0.00 0.00 0.00 4.96
532 533 1.455959 TTTTCGTTGGGGTGGTGGG 60.456 57.895 0.00 0.00 0.00 4.61
534 535 1.038130 TGGTTTTCGTTGGGGTGGTG 61.038 55.000 0.00 0.00 0.00 4.17
535 536 1.038681 GTGGTTTTCGTTGGGGTGGT 61.039 55.000 0.00 0.00 0.00 4.16
542 557 1.544686 GTGTGCTGTGGTTTTCGTTG 58.455 50.000 0.00 0.00 0.00 4.10
546 561 4.302154 GCGTGTGCTGTGGTTTTC 57.698 55.556 0.00 0.00 38.39 2.29
598 613 0.825840 TGGGTAGTTTTGCTGGTGGC 60.826 55.000 0.00 0.00 42.22 5.01
607 622 0.112412 CAGTGCCCCTGGGTAGTTTT 59.888 55.000 12.71 0.00 37.54 2.43
617 632 0.249398 GTAATCGACACAGTGCCCCT 59.751 55.000 0.00 0.00 0.00 4.79
619 634 0.249398 AGGTAATCGACACAGTGCCC 59.751 55.000 0.00 0.00 0.00 5.36
631 646 1.453928 GCTGGCCCCACAGGTAATC 60.454 63.158 0.00 0.00 38.90 1.75
725 740 2.019249 GGTGGGGTTCGTATTAAAGCC 58.981 52.381 0.00 0.00 42.31 4.35
826 848 1.271054 CCACTGGCTACTCTGCTTTGT 60.271 52.381 0.00 0.00 0.00 2.83
935 966 1.740718 GCACCTGGACTAAGCTACAGC 60.741 57.143 0.00 0.00 42.49 4.40
936 967 1.827969 AGCACCTGGACTAAGCTACAG 59.172 52.381 0.00 0.00 33.06 2.74
938 969 2.301577 CAGCACCTGGACTAAGCTAC 57.698 55.000 0.00 0.00 33.59 3.58
949 980 0.979709 TCCTCTGATCCCAGCACCTG 60.980 60.000 0.00 0.00 40.20 4.00
952 983 0.752054 CTCTCCTCTGATCCCAGCAC 59.248 60.000 0.00 0.00 40.20 4.40
1023 1073 2.743928 GAGCAGAAGCACCACCCG 60.744 66.667 0.00 0.00 45.49 5.28
1056 1106 4.821589 GCCTTGACCCGCTCGGAG 62.822 72.222 10.28 0.00 37.50 4.63
1134 1184 1.265454 GGTTCCGGTGGATCAGGAGT 61.265 60.000 0.00 0.00 41.10 3.85
1245 1295 3.168528 AACCTGTGGGGCACGAGT 61.169 61.111 0.00 0.00 37.14 4.18
1269 1319 1.392534 GTGGGAGGGAGAAGGAGGA 59.607 63.158 0.00 0.00 0.00 3.71
1270 1320 1.690985 GGTGGGAGGGAGAAGGAGG 60.691 68.421 0.00 0.00 0.00 4.30
1271 1321 0.689412 GAGGTGGGAGGGAGAAGGAG 60.689 65.000 0.00 0.00 0.00 3.69
1272 1322 1.392534 GAGGTGGGAGGGAGAAGGA 59.607 63.158 0.00 0.00 0.00 3.36
1282 1332 1.821966 TAGCAGGAAGGGAGGTGGGA 61.822 60.000 0.00 0.00 0.00 4.37
1305 1355 2.279517 CGGCGGCTAAGGCTAGTG 60.280 66.667 7.61 0.00 38.73 2.74
1327 1377 0.171903 ATGCAGCGATTTGGTTCAGC 59.828 50.000 0.00 0.00 0.00 4.26
1351 1401 8.871686 AACAAATCCACAGTAAGAAATGAAAC 57.128 30.769 0.00 0.00 0.00 2.78
1352 1402 7.860373 CGAACAAATCCACAGTAAGAAATGAAA 59.140 33.333 0.00 0.00 0.00 2.69
1356 1406 5.335661 GCCGAACAAATCCACAGTAAGAAAT 60.336 40.000 0.00 0.00 0.00 2.17
1357 1407 4.023536 GCCGAACAAATCCACAGTAAGAAA 60.024 41.667 0.00 0.00 0.00 2.52
1360 1410 3.074412 AGCCGAACAAATCCACAGTAAG 58.926 45.455 0.00 0.00 0.00 2.34
1361 1411 3.071479 GAGCCGAACAAATCCACAGTAA 58.929 45.455 0.00 0.00 0.00 2.24
1363 1413 1.072331 AGAGCCGAACAAATCCACAGT 59.928 47.619 0.00 0.00 0.00 3.55
1440 1509 2.760385 GTAGAGCGGTCCCTGCCT 60.760 66.667 11.73 0.00 0.00 4.75
1444 1513 2.754658 CCACGTAGAGCGGTCCCT 60.755 66.667 11.73 0.00 46.52 4.20
1452 1521 1.393539 CAACAAATCCGCCACGTAGAG 59.606 52.381 0.00 0.00 0.00 2.43
1453 1522 1.270412 ACAACAAATCCGCCACGTAGA 60.270 47.619 0.00 0.00 0.00 2.59
1455 1524 1.264557 CAACAACAAATCCGCCACGTA 59.735 47.619 0.00 0.00 0.00 3.57
1459 1528 0.387202 CACCAACAACAAATCCGCCA 59.613 50.000 0.00 0.00 0.00 5.69
1530 1601 3.671702 GCACTAGCAGTTGAATTTGGCTC 60.672 47.826 0.00 0.00 41.58 4.70
1650 1721 3.008485 ACACTTCTCTCTCCCCATTGTTC 59.992 47.826 0.00 0.00 0.00 3.18
1655 1726 2.630889 TGACACTTCTCTCTCCCCAT 57.369 50.000 0.00 0.00 0.00 4.00
1661 1732 6.127196 GGATCCAACTAATGACACTTCTCTCT 60.127 42.308 6.95 0.00 0.00 3.10
1662 1733 6.045955 GGATCCAACTAATGACACTTCTCTC 58.954 44.000 6.95 0.00 0.00 3.20
1663 1734 5.485353 TGGATCCAACTAATGACACTTCTCT 59.515 40.000 13.46 0.00 0.00 3.10
1664 1735 5.734720 TGGATCCAACTAATGACACTTCTC 58.265 41.667 13.46 0.00 0.00 2.87
1665 1736 5.762179 TGGATCCAACTAATGACACTTCT 57.238 39.130 13.46 0.00 0.00 2.85
1666 1737 5.163713 GCTTGGATCCAACTAATGACACTTC 60.164 44.000 23.63 0.00 0.00 3.01
1672 1743 4.018506 TCCTTGCTTGGATCCAACTAATGA 60.019 41.667 23.63 17.96 0.00 2.57
1677 1748 1.611673 CGTCCTTGCTTGGATCCAACT 60.612 52.381 23.63 0.00 38.52 3.16
1713 1784 8.404107 TCCTCAAATAGTACCCAAAAAGAAAG 57.596 34.615 0.00 0.00 0.00 2.62
1715 1786 7.780745 TGTTCCTCAAATAGTACCCAAAAAGAA 59.219 33.333 0.00 0.00 0.00 2.52
1723 1794 5.272283 TCGATGTTCCTCAAATAGTACCC 57.728 43.478 0.00 0.00 0.00 3.69
1731 1802 7.680442 TCACATTAATTCGATGTTCCTCAAA 57.320 32.000 4.99 0.00 35.64 2.69
1735 1806 7.489113 GCAAAATCACATTAATTCGATGTTCCT 59.511 33.333 4.99 0.00 35.64 3.36
1736 1807 7.513505 CGCAAAATCACATTAATTCGATGTTCC 60.514 37.037 4.99 0.00 35.64 3.62
1737 1808 7.322260 CGCAAAATCACATTAATTCGATGTTC 58.678 34.615 4.99 0.00 35.64 3.18
1738 1809 6.237542 GCGCAAAATCACATTAATTCGATGTT 60.238 34.615 0.30 0.00 35.64 2.71
1740 1811 5.605884 CGCGCAAAATCACATTAATTCGATG 60.606 40.000 8.75 1.34 0.00 3.84
1742 1813 3.783418 CGCGCAAAATCACATTAATTCGA 59.217 39.130 8.75 0.00 0.00 3.71
1743 1814 3.061928 CCGCGCAAAATCACATTAATTCG 60.062 43.478 8.75 0.00 0.00 3.34
1852 2004 3.877508 CCACTTACTACTATTGCTTGCCC 59.122 47.826 0.00 0.00 0.00 5.36
1887 2039 0.403271 ATGACTCCAACCTTGCTGCT 59.597 50.000 0.00 0.00 0.00 4.24
1950 2102 4.202050 CCTTTGTTTACTGAGCAGCAAAGT 60.202 41.667 18.35 0.00 40.35 2.66
2105 2261 1.625818 AGGTCAAGAATCGAGCTGGTT 59.374 47.619 0.00 0.00 39.65 3.67
2648 2804 7.153217 TGATGCATCATCATTATTGTCATCC 57.847 36.000 25.42 0.00 44.60 3.51
2672 2828 6.514048 GCTTTGCAGTCATCTTTGAAGTAACT 60.514 38.462 0.00 0.00 32.48 2.24
2691 2847 0.607620 TGCTGGTATTTGGGCTTTGC 59.392 50.000 0.00 0.00 0.00 3.68
2699 2855 1.683011 CCTGACCCCTGCTGGTATTTG 60.683 57.143 9.00 0.00 39.24 2.32
2871 3027 1.004044 AGCTGGGAAGTTGATGTCCAG 59.996 52.381 0.00 0.00 45.59 3.86
2909 3065 3.586470 TTCAAGGGCAGTGGTAGAAAA 57.414 42.857 0.00 0.00 0.00 2.29
2963 3119 0.404040 TCCTGGGTTTCGCCTTTGAT 59.596 50.000 0.00 0.00 37.43 2.57
2966 3122 1.545841 GATTCCTGGGTTTCGCCTTT 58.454 50.000 0.00 0.00 37.43 3.11
3194 3350 1.428912 TCCCTGGAGCTTGGAATGTTT 59.571 47.619 0.00 0.00 0.00 2.83
3203 3359 1.682257 GTGCTTCTCCCTGGAGCTT 59.318 57.895 8.39 0.00 41.71 3.74
3588 3744 3.760035 TCGCTGACGAGCTTCCCC 61.760 66.667 0.00 0.00 45.12 4.81
3615 3771 5.661458 AGAGAGAAGAAACACAACGAAGAA 58.339 37.500 0.00 0.00 0.00 2.52
3620 3776 5.764131 ACTCTAGAGAGAAGAAACACAACG 58.236 41.667 26.57 0.00 44.74 4.10
3709 3865 3.775316 CCAGGGTATATGGTCCACTATCC 59.225 52.174 0.00 0.00 32.85 2.59
3714 3870 2.305927 CCATCCAGGGTATATGGTCCAC 59.694 54.545 0.00 0.00 39.01 4.02
3763 3921 1.333308 TCTGCACACGAAAACACATGG 59.667 47.619 0.00 0.00 0.00 3.66
3888 4046 5.649831 GGGCAAAAGAACTGATAGTCATTCT 59.350 40.000 0.00 0.00 30.86 2.40
3927 4085 3.624861 CCCATGTGAAGTCAATACAGAGC 59.375 47.826 0.00 0.00 0.00 4.09
3937 4100 2.360165 GGCATCAATCCCATGTGAAGTC 59.640 50.000 0.00 0.00 0.00 3.01
3951 4114 2.530460 AAATGGTAGGCAGGCATCAA 57.470 45.000 0.00 0.00 0.00 2.57
3955 4118 2.008242 ACAAAAATGGTAGGCAGGCA 57.992 45.000 0.00 0.00 0.00 4.75
3956 4119 3.066380 CAAACAAAAATGGTAGGCAGGC 58.934 45.455 0.00 0.00 0.00 4.85
3957 4120 3.066380 GCAAACAAAAATGGTAGGCAGG 58.934 45.455 0.00 0.00 0.00 4.85
3958 4121 3.993920 AGCAAACAAAAATGGTAGGCAG 58.006 40.909 0.00 0.00 0.00 4.85
4005 4169 2.027100 GGAGGTTCTTTAGTCCACCTGG 60.027 54.545 0.00 0.00 39.90 4.45
4031 4195 2.257207 TCAGACGGGTGAAAGAATCCT 58.743 47.619 0.00 0.00 0.00 3.24
4032 4196 2.762535 TCAGACGGGTGAAAGAATCC 57.237 50.000 0.00 0.00 0.00 3.01
4055 4219 1.078918 CAGATCCGCAGAAGCACCA 60.079 57.895 0.00 0.00 42.27 4.17
4069 4233 7.281774 CAGGCTCAACAACAGTATTATTCAGAT 59.718 37.037 0.00 0.00 0.00 2.90
4087 4252 4.080129 AGGAAGCATATTCTTCAGGCTCAA 60.080 41.667 15.59 0.00 43.14 3.02
4092 4257 4.774124 TGACAGGAAGCATATTCTTCAGG 58.226 43.478 15.59 9.67 43.14 3.86
4127 4292 3.247411 CCCGTCAAAAAGAAAATGTTGGC 59.753 43.478 0.00 0.00 0.00 4.52
4128 4293 3.247411 GCCCGTCAAAAAGAAAATGTTGG 59.753 43.478 0.00 0.00 0.00 3.77
4129 4294 4.025813 CAGCCCGTCAAAAAGAAAATGTTG 60.026 41.667 0.00 0.00 0.00 3.33
4130 4295 4.119136 CAGCCCGTCAAAAAGAAAATGTT 58.881 39.130 0.00 0.00 0.00 2.71
4131 4296 3.383185 TCAGCCCGTCAAAAAGAAAATGT 59.617 39.130 0.00 0.00 0.00 2.71
4133 4298 4.664150 TTCAGCCCGTCAAAAAGAAAAT 57.336 36.364 0.00 0.00 0.00 1.82
4138 4323 5.925969 ACAATAAATTCAGCCCGTCAAAAAG 59.074 36.000 0.00 0.00 0.00 2.27
4158 4343 6.476380 CAGCAACACAAAATCAGTTGTACAAT 59.524 34.615 12.26 0.00 43.31 2.71
4160 4345 5.124617 TCAGCAACACAAAATCAGTTGTACA 59.875 36.000 0.00 0.00 43.31 2.90
4174 4359 6.497437 GCAAACATATCATATCAGCAACACA 58.503 36.000 0.00 0.00 0.00 3.72
4175 4360 5.622448 CGCAAACATATCATATCAGCAACAC 59.378 40.000 0.00 0.00 0.00 3.32
4176 4361 5.750650 CGCAAACATATCATATCAGCAACA 58.249 37.500 0.00 0.00 0.00 3.33
4211 4396 2.071778 AAAGTTGTGTGTCCCATGCT 57.928 45.000 0.00 0.00 0.00 3.79
4259 4446 7.302524 ACTCGATTTTTACGCATAAACATGTT 58.697 30.769 4.92 4.92 29.77 2.71
4304 4499 1.685765 GAAATGGGGCAGGGGGAAC 60.686 63.158 0.00 0.00 0.00 3.62
4307 4502 1.003312 AATGAAATGGGGCAGGGGG 59.997 57.895 0.00 0.00 0.00 5.40
4328 4523 3.719924 TGCTGTTTTTCTTGCCTCATTG 58.280 40.909 0.00 0.00 0.00 2.82
4350 4545 0.880278 GAGCGCTGTGAACAGTTGGA 60.880 55.000 18.48 0.00 45.45 3.53
4394 4589 6.381420 TGGGAATACTCAAGTTGGTTTTTCAA 59.619 34.615 2.34 0.00 0.00 2.69
4396 4591 6.264518 TCTGGGAATACTCAAGTTGGTTTTTC 59.735 38.462 2.34 7.03 0.00 2.29
4402 4597 4.826274 TCTCTGGGAATACTCAAGTTGG 57.174 45.455 2.34 0.00 0.00 3.77
4403 4598 6.042638 TCTTCTCTGGGAATACTCAAGTTG 57.957 41.667 0.00 0.00 33.01 3.16
4404 4599 6.019748 TCTCTTCTCTGGGAATACTCAAGTT 58.980 40.000 0.00 0.00 33.01 2.66
4405 4600 5.584913 TCTCTTCTCTGGGAATACTCAAGT 58.415 41.667 0.00 0.00 33.01 3.16
4406 4601 5.890985 TCTCTCTTCTCTGGGAATACTCAAG 59.109 44.000 0.00 0.00 33.01 3.02
4407 4602 5.832221 TCTCTCTTCTCTGGGAATACTCAA 58.168 41.667 0.00 0.00 33.01 3.02
4408 4603 5.445069 CTCTCTCTTCTCTGGGAATACTCA 58.555 45.833 0.00 0.00 33.01 3.41
4409 4604 4.278419 GCTCTCTCTTCTCTGGGAATACTC 59.722 50.000 0.00 0.00 33.01 2.59
4410 4605 4.079212 AGCTCTCTCTTCTCTGGGAATACT 60.079 45.833 0.00 0.00 33.01 2.12
4411 4606 4.215109 AGCTCTCTCTTCTCTGGGAATAC 58.785 47.826 0.00 0.00 33.01 1.89
4412 4607 4.534647 AGCTCTCTCTTCTCTGGGAATA 57.465 45.455 0.00 0.00 33.01 1.75
4413 4608 3.403228 AGCTCTCTCTTCTCTGGGAAT 57.597 47.619 0.00 0.00 33.01 3.01
4414 4609 2.830923 CAAGCTCTCTCTTCTCTGGGAA 59.169 50.000 0.00 0.00 0.00 3.97
4415 4610 2.455557 CAAGCTCTCTCTTCTCTGGGA 58.544 52.381 0.00 0.00 0.00 4.37
4416 4611 1.134729 GCAAGCTCTCTCTTCTCTGGG 60.135 57.143 0.00 0.00 0.00 4.45
4417 4612 1.826720 AGCAAGCTCTCTCTTCTCTGG 59.173 52.381 0.00 0.00 0.00 3.86
4418 4613 3.255725 CAAGCAAGCTCTCTCTTCTCTG 58.744 50.000 0.00 0.00 0.00 3.35
4419 4614 2.899256 ACAAGCAAGCTCTCTCTTCTCT 59.101 45.455 0.00 0.00 0.00 3.10
4420 4615 2.995258 CACAAGCAAGCTCTCTCTTCTC 59.005 50.000 0.00 0.00 0.00 2.87
4421 4616 2.368221 ACACAAGCAAGCTCTCTCTTCT 59.632 45.455 0.00 0.00 0.00 2.85
4422 4617 2.765122 ACACAAGCAAGCTCTCTCTTC 58.235 47.619 0.00 0.00 0.00 2.87
4423 4618 2.926778 ACACAAGCAAGCTCTCTCTT 57.073 45.000 0.00 0.00 0.00 2.85
4424 4619 2.352225 CGTACACAAGCAAGCTCTCTCT 60.352 50.000 0.00 0.00 0.00 3.10
4425 4620 1.989165 CGTACACAAGCAAGCTCTCTC 59.011 52.381 0.00 0.00 0.00 3.20
4426 4621 1.937108 GCGTACACAAGCAAGCTCTCT 60.937 52.381 0.00 0.00 0.00 3.10
4427 4622 0.440371 GCGTACACAAGCAAGCTCTC 59.560 55.000 0.00 0.00 0.00 3.20
4428 4623 1.284982 CGCGTACACAAGCAAGCTCT 61.285 55.000 0.00 0.00 0.00 4.09
4429 4624 1.130613 CGCGTACACAAGCAAGCTC 59.869 57.895 0.00 0.00 0.00 4.09
4430 4625 0.319211 TACGCGTACACAAGCAAGCT 60.319 50.000 16.41 0.00 0.00 3.74
4431 4626 0.093026 CTACGCGTACACAAGCAAGC 59.907 55.000 16.41 0.00 0.00 4.01
4432 4627 0.093026 GCTACGCGTACACAAGCAAG 59.907 55.000 22.44 10.34 33.38 4.01
4433 4628 2.146954 GCTACGCGTACACAAGCAA 58.853 52.632 22.44 0.00 33.38 3.91
4434 4629 3.850923 GCTACGCGTACACAAGCA 58.149 55.556 22.44 0.00 33.38 3.91
4445 4640 0.029700 AAAACACCCAAACGCTACGC 59.970 50.000 0.00 0.00 0.00 4.42
4446 4641 2.032426 AGAAAAACACCCAAACGCTACG 59.968 45.455 0.00 0.00 0.00 3.51
4447 4642 3.703286 AGAAAAACACCCAAACGCTAC 57.297 42.857 0.00 0.00 0.00 3.58
4448 4643 3.067040 GGAAGAAAAACACCCAAACGCTA 59.933 43.478 0.00 0.00 0.00 4.26
4449 4644 2.159156 GGAAGAAAAACACCCAAACGCT 60.159 45.455 0.00 0.00 0.00 5.07
4450 4645 2.198406 GGAAGAAAAACACCCAAACGC 58.802 47.619 0.00 0.00 0.00 4.84
4451 4646 2.796735 CGGGAAGAAAAACACCCAAACG 60.797 50.000 0.00 0.00 42.16 3.60
4452 4647 2.166870 ACGGGAAGAAAAACACCCAAAC 59.833 45.455 0.00 0.00 42.16 2.93
4453 4648 2.458620 ACGGGAAGAAAAACACCCAAA 58.541 42.857 0.00 0.00 42.16 3.28
4454 4649 2.146920 ACGGGAAGAAAAACACCCAA 57.853 45.000 0.00 0.00 42.16 4.12
4455 4650 2.025898 GAACGGGAAGAAAAACACCCA 58.974 47.619 0.00 0.00 42.16 4.51
4456 4651 2.025898 TGAACGGGAAGAAAAACACCC 58.974 47.619 0.00 0.00 39.02 4.61
4457 4652 2.424246 TGTGAACGGGAAGAAAAACACC 59.576 45.455 0.00 0.00 0.00 4.16
4458 4653 3.375922 TCTGTGAACGGGAAGAAAAACAC 59.624 43.478 0.00 0.00 0.00 3.32
4459 4654 3.611970 TCTGTGAACGGGAAGAAAAACA 58.388 40.909 0.00 0.00 0.00 2.83
4460 4655 4.830826 ATCTGTGAACGGGAAGAAAAAC 57.169 40.909 0.00 0.00 0.00 2.43
4461 4656 5.592688 AGAAATCTGTGAACGGGAAGAAAAA 59.407 36.000 0.00 0.00 0.00 1.94
4462 4657 5.130350 AGAAATCTGTGAACGGGAAGAAAA 58.870 37.500 0.00 0.00 0.00 2.29
4463 4658 4.714632 AGAAATCTGTGAACGGGAAGAAA 58.285 39.130 0.00 0.00 0.00 2.52
4464 4659 4.202315 TGAGAAATCTGTGAACGGGAAGAA 60.202 41.667 0.00 0.00 0.00 2.52
4465 4660 3.323691 TGAGAAATCTGTGAACGGGAAGA 59.676 43.478 0.00 0.00 0.00 2.87
4466 4661 3.664107 TGAGAAATCTGTGAACGGGAAG 58.336 45.455 0.00 0.00 0.00 3.46
4467 4662 3.557054 CCTGAGAAATCTGTGAACGGGAA 60.557 47.826 0.00 0.00 0.00 3.97
4468 4663 2.028112 CCTGAGAAATCTGTGAACGGGA 60.028 50.000 0.00 0.00 0.00 5.14
4469 4664 2.350522 CCTGAGAAATCTGTGAACGGG 58.649 52.381 0.00 0.00 0.00 5.28
4470 4665 2.028112 TCCCTGAGAAATCTGTGAACGG 60.028 50.000 0.00 0.00 0.00 4.44
4471 4666 3.319137 TCCCTGAGAAATCTGTGAACG 57.681 47.619 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.