Multiple sequence alignment - TraesCS3B01G458400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G458400 chr3B 100.000 2281 0 0 1 2281 700809798 700812078 0.000000e+00 4213.0
1 TraesCS3B01G458400 chr3B 91.812 1832 133 10 1 1818 700798906 700800734 0.000000e+00 2536.0
2 TraesCS3B01G458400 chr3B 97.077 479 13 1 1803 2281 785897963 785897486 0.000000e+00 806.0
3 TraesCS3B01G458400 chr3B 76.761 142 29 4 1817 1956 358895052 358894913 2.430000e-10 76.8
4 TraesCS3B01G458400 chr3A 92.046 1735 118 8 1 1721 418765669 418763941 0.000000e+00 2422.0
5 TraesCS3B01G458400 chr4D 91.850 1730 125 10 1 1721 116524566 116522844 0.000000e+00 2399.0
6 TraesCS3B01G458400 chr4D 91.402 1733 130 9 1 1721 493971118 493969393 0.000000e+00 2357.0
7 TraesCS3B01G458400 chr4D 90.857 1739 137 12 1 1725 421048645 421046915 0.000000e+00 2311.0
8 TraesCS3B01G458400 chr4D 91.667 48 3 1 1741 1787 467983084 467983131 5.260000e-07 65.8
9 TraesCS3B01G458400 chr4D 91.489 47 3 1 1742 1787 116146827 116146873 1.890000e-06 63.9
10 TraesCS3B01G458400 chr5B 91.498 1729 139 6 1 1721 375712254 375710526 0.000000e+00 2372.0
11 TraesCS3B01G458400 chr5B 94.340 53 2 1 1736 1787 704094580 704094632 1.880000e-11 80.5
12 TraesCS3B01G458400 chr1A 91.282 1732 134 10 1 1721 327011927 327010202 0.000000e+00 2346.0
13 TraesCS3B01G458400 chr7D 91.124 1735 132 12 1 1721 432740552 432738826 0.000000e+00 2331.0
14 TraesCS3B01G458400 chr4A 90.935 1732 136 12 4 1721 327748380 327746656 0.000000e+00 2309.0
15 TraesCS3B01G458400 chr4A 92.453 53 2 2 1808 1860 644629211 644629261 8.740000e-10 75.0
16 TraesCS3B01G458400 chr6A 87.918 389 38 7 1817 2204 18034755 18035135 1.240000e-122 449.0
17 TraesCS3B01G458400 chr6A 96.970 33 1 0 2206 2238 18035160 18035192 3.170000e-04 56.5
18 TraesCS3B01G458400 chr2D 79.644 393 58 14 1817 2204 586309267 586308892 1.740000e-66 263.0
19 TraesCS3B01G458400 chr2D 81.319 91 12 5 1813 1900 623410304 623410216 4.070000e-08 69.4
20 TraesCS3B01G458400 chr7B 77.212 373 57 16 1817 2188 363221438 363221093 2.310000e-45 193.0
21 TraesCS3B01G458400 chr7B 80.233 86 14 3 1817 1900 492488090 492488006 6.800000e-06 62.1
22 TraesCS3B01G458400 chr7B 96.970 33 1 0 2206 2238 67696490 67696522 3.170000e-04 56.5
23 TraesCS3B01G458400 chr1D 78.049 328 50 15 1817 2143 120115377 120115071 1.080000e-43 187.0
24 TraesCS3B01G458400 chr4B 78.750 160 31 3 1817 1974 212533995 212533837 1.110000e-18 104.0
25 TraesCS3B01G458400 chr5D 77.500 160 33 3 1817 1974 517048648 517048806 2.410000e-15 93.5
26 TraesCS3B01G458400 chr6B 89.286 56 5 1 1733 1787 68677911 68677966 4.070000e-08 69.4
27 TraesCS3B01G458400 chr2A 95.122 41 2 0 1736 1776 554419307 554419267 5.260000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G458400 chr3B 700809798 700812078 2280 False 4213 4213 100.000 1 2281 1 chr3B.!!$F2 2280
1 TraesCS3B01G458400 chr3B 700798906 700800734 1828 False 2536 2536 91.812 1 1818 1 chr3B.!!$F1 1817
2 TraesCS3B01G458400 chr3A 418763941 418765669 1728 True 2422 2422 92.046 1 1721 1 chr3A.!!$R1 1720
3 TraesCS3B01G458400 chr4D 116522844 116524566 1722 True 2399 2399 91.850 1 1721 1 chr4D.!!$R1 1720
4 TraesCS3B01G458400 chr4D 493969393 493971118 1725 True 2357 2357 91.402 1 1721 1 chr4D.!!$R3 1720
5 TraesCS3B01G458400 chr4D 421046915 421048645 1730 True 2311 2311 90.857 1 1725 1 chr4D.!!$R2 1724
6 TraesCS3B01G458400 chr5B 375710526 375712254 1728 True 2372 2372 91.498 1 1721 1 chr5B.!!$R1 1720
7 TraesCS3B01G458400 chr1A 327010202 327011927 1725 True 2346 2346 91.282 1 1721 1 chr1A.!!$R1 1720
8 TraesCS3B01G458400 chr7D 432738826 432740552 1726 True 2331 2331 91.124 1 1721 1 chr7D.!!$R1 1720
9 TraesCS3B01G458400 chr4A 327746656 327748380 1724 True 2309 2309 90.935 4 1721 1 chr4A.!!$R1 1717

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
617 646 0.250597 GGTGGGTAAGTGGTGGTCAC 60.251 60.0 0.0 0.0 46.39 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1831 1873 0.029681 ATGTGGTGGGGAGCTCCTAT 60.03 55.0 31.36 11.94 35.95 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 0.975556 TCGAGTGGCTGGCCTTCATA 60.976 55.000 13.05 0.32 36.94 2.15
46 47 3.549794 GCTGGCCTTCATATTCTTGTCT 58.450 45.455 3.32 0.00 0.00 3.41
50 51 6.499106 TGGCCTTCATATTCTTGTCTATCA 57.501 37.500 3.32 0.00 0.00 2.15
91 92 1.715862 CGTCGCTCTCGGAGGAATCA 61.716 60.000 4.96 0.00 36.13 2.57
513 514 2.304831 GGAAGAAGGCCCTCCAGCT 61.305 63.158 0.00 0.00 33.74 4.24
588 613 4.889780 AGGAGGAAGGTTGATAGTGAGAT 58.110 43.478 0.00 0.00 0.00 2.75
617 646 0.250597 GGTGGGTAAGTGGTGGTCAC 60.251 60.000 0.00 0.00 46.39 3.67
632 661 5.187381 TGGTGGTCACGGTGAGTAAATATAA 59.813 40.000 11.83 0.00 0.00 0.98
729 761 2.715046 TGTGCCTGAGTCCATGAATTC 58.285 47.619 0.00 0.00 0.00 2.17
734 766 3.871463 GCCTGAGTCCATGAATTCTGTGT 60.871 47.826 7.05 0.00 0.00 3.72
764 796 3.418995 GAGAGCAATGATATGGGCATGT 58.581 45.455 0.00 0.00 0.00 3.21
800 832 0.843309 TGACAACAAGGGCAAGGAGA 59.157 50.000 0.00 0.00 0.00 3.71
955 987 1.765074 GGGTGGCCCAACTCACTTA 59.235 57.895 0.00 0.00 44.65 2.24
961 993 2.102578 GGCCCAACTCACTTATGCAAT 58.897 47.619 0.00 0.00 0.00 3.56
1023 1057 2.887152 GGACTTCACCAAGCACTTCATT 59.113 45.455 0.00 0.00 32.09 2.57
1068 1102 1.765314 AGGAACAACACTGACTGCTCT 59.235 47.619 0.00 0.00 0.00 4.09
1087 1121 0.761323 TTGGAGGGTGACGGTGAAGA 60.761 55.000 0.00 0.00 0.00 2.87
1089 1123 1.272816 TGGAGGGTGACGGTGAAGATA 60.273 52.381 0.00 0.00 0.00 1.98
1179 1215 0.439985 CATGGTGACGTTCAAGCTCG 59.560 55.000 0.00 0.00 0.00 5.03
1397 1433 5.277490 CGTTATGTTATCTGAACCATGCTGG 60.277 44.000 1.16 1.16 45.02 4.85
1464 1500 0.802494 GTACATGGTTGTGCCGAAGG 59.198 55.000 0.00 0.00 44.33 3.46
1540 1578 1.411977 CAACCAAACACCATGCCTTGA 59.588 47.619 0.00 0.00 0.00 3.02
1549 1587 1.901833 ACCATGCCTTGAATTTGTCCC 59.098 47.619 0.00 0.00 0.00 4.46
1550 1588 1.901159 CCATGCCTTGAATTTGTCCCA 59.099 47.619 0.00 0.00 0.00 4.37
1633 1672 1.277557 AGGCAACCAAACAACTTGCAA 59.722 42.857 0.00 0.00 41.77 4.08
1674 1715 1.722636 GCATAGCCAGGCTGAGTTGC 61.723 60.000 25.59 21.45 40.10 4.17
1721 1763 1.937899 GACTACAGCAACCAAACACGT 59.062 47.619 0.00 0.00 0.00 4.49
1725 1767 2.634600 ACAGCAACCAAACACGTTCTA 58.365 42.857 0.00 0.00 0.00 2.10
1739 1781 5.234752 ACACGTTCTATGTTGTGCATAAGA 58.765 37.500 0.00 0.00 39.36 2.10
1756 1798 0.106519 AGAGCATGTACAATGGGGGC 60.107 55.000 0.00 0.00 0.00 5.80
1763 1805 2.237965 TACAATGGGGGCAGCACCT 61.238 57.895 15.19 0.00 39.10 4.00
1764 1806 0.916845 TACAATGGGGGCAGCACCTA 60.917 55.000 15.19 8.35 39.10 3.08
1787 1829 2.033448 TGCCCCAACATCCACGTC 59.967 61.111 0.00 0.00 0.00 4.34
1799 1841 2.408271 TCCACGTCGGAGTACAGTAT 57.592 50.000 0.00 0.00 39.64 2.12
1810 1852 5.768164 TCGGAGTACAGTATATGAAGCATCA 59.232 40.000 0.00 0.00 40.57 3.07
1811 1853 6.264518 TCGGAGTACAGTATATGAAGCATCAA 59.735 38.462 0.00 0.00 39.49 2.57
1843 1885 8.504409 TCTACTATATCTAAATAGGAGCTCCCC 58.496 40.741 29.54 6.19 39.41 4.81
1844 1886 7.057732 ACTATATCTAAATAGGAGCTCCCCA 57.942 40.000 29.54 17.98 34.34 4.96
1845 1887 6.898521 ACTATATCTAAATAGGAGCTCCCCAC 59.101 42.308 29.54 4.15 34.34 4.61
1846 1888 2.690840 TCTAAATAGGAGCTCCCCACC 58.309 52.381 29.54 4.44 36.42 4.61
1847 1889 2.022428 TCTAAATAGGAGCTCCCCACCA 60.022 50.000 29.54 11.21 36.42 4.17
1848 1890 0.919710 AAATAGGAGCTCCCCACCAC 59.080 55.000 29.54 2.09 36.42 4.16
1849 1891 0.253160 AATAGGAGCTCCCCACCACA 60.253 55.000 29.54 6.30 36.42 4.17
1850 1892 0.029681 ATAGGAGCTCCCCACCACAT 60.030 55.000 29.54 10.66 36.42 3.21
1851 1893 0.982852 TAGGAGCTCCCCACCACATG 60.983 60.000 29.54 0.00 36.42 3.21
1852 1894 2.300967 GGAGCTCCCCACCACATGA 61.301 63.158 23.19 0.00 0.00 3.07
1853 1895 1.639635 GGAGCTCCCCACCACATGAT 61.640 60.000 23.19 0.00 0.00 2.45
1854 1896 0.257039 GAGCTCCCCACCACATGATT 59.743 55.000 0.87 0.00 0.00 2.57
1855 1897 0.706433 AGCTCCCCACCACATGATTT 59.294 50.000 0.00 0.00 0.00 2.17
1856 1898 1.106285 GCTCCCCACCACATGATTTC 58.894 55.000 0.00 0.00 0.00 2.17
1857 1899 1.341383 GCTCCCCACCACATGATTTCT 60.341 52.381 0.00 0.00 0.00 2.52
1858 1900 2.648059 CTCCCCACCACATGATTTCTC 58.352 52.381 0.00 0.00 0.00 2.87
1859 1901 2.240667 CTCCCCACCACATGATTTCTCT 59.759 50.000 0.00 0.00 0.00 3.10
1860 1902 2.025981 TCCCCACCACATGATTTCTCTG 60.026 50.000 0.00 0.00 0.00 3.35
1861 1903 2.025981 CCCCACCACATGATTTCTCTGA 60.026 50.000 0.00 0.00 0.00 3.27
1862 1904 3.276857 CCCACCACATGATTTCTCTGAG 58.723 50.000 0.00 0.00 0.00 3.35
1863 1905 2.681848 CCACCACATGATTTCTCTGAGC 59.318 50.000 0.00 0.00 0.00 4.26
1864 1906 3.607741 CACCACATGATTTCTCTGAGCT 58.392 45.455 0.00 0.00 0.00 4.09
1865 1907 3.622163 CACCACATGATTTCTCTGAGCTC 59.378 47.826 6.82 6.82 0.00 4.09
1866 1908 3.518705 ACCACATGATTTCTCTGAGCTCT 59.481 43.478 16.19 0.00 0.00 4.09
1867 1909 4.121317 CCACATGATTTCTCTGAGCTCTC 58.879 47.826 16.19 2.45 0.00 3.20
1868 1910 4.382793 CCACATGATTTCTCTGAGCTCTCA 60.383 45.833 16.19 8.64 38.06 3.27
1869 1911 4.567558 CACATGATTTCTCTGAGCTCTCAC 59.432 45.833 16.19 0.00 35.46 3.51
1870 1912 3.500558 TGATTTCTCTGAGCTCTCACG 57.499 47.619 16.19 1.00 35.46 4.35
1871 1913 2.192624 GATTTCTCTGAGCTCTCACGC 58.807 52.381 16.19 0.00 35.46 5.34
1872 1914 0.961753 TTTCTCTGAGCTCTCACGCA 59.038 50.000 16.19 0.00 35.46 5.24
1873 1915 1.180907 TTCTCTGAGCTCTCACGCAT 58.819 50.000 16.19 0.00 35.46 4.73
1874 1916 0.737804 TCTCTGAGCTCTCACGCATC 59.262 55.000 16.19 0.00 35.46 3.91
1875 1917 0.248990 CTCTGAGCTCTCACGCATCC 60.249 60.000 16.19 0.00 35.46 3.51
1876 1918 0.967380 TCTGAGCTCTCACGCATCCA 60.967 55.000 16.19 0.00 35.46 3.41
1877 1919 0.805322 CTGAGCTCTCACGCATCCAC 60.805 60.000 16.19 0.00 35.46 4.02
1878 1920 1.875813 GAGCTCTCACGCATCCACG 60.876 63.158 6.43 0.00 39.50 4.94
1880 1922 2.161486 GCTCTCACGCATCCACGTC 61.161 63.158 0.00 0.00 46.34 4.34
1881 1923 1.212751 CTCTCACGCATCCACGTCA 59.787 57.895 0.00 0.00 46.34 4.35
1882 1924 1.073216 CTCTCACGCATCCACGTCAC 61.073 60.000 0.00 0.00 46.34 3.67
1883 1925 2.048597 TCACGCATCCACGTCACC 60.049 61.111 0.00 0.00 46.34 4.02
1884 1926 2.356913 CACGCATCCACGTCACCA 60.357 61.111 0.00 0.00 46.34 4.17
1885 1927 1.741401 CACGCATCCACGTCACCAT 60.741 57.895 0.00 0.00 46.34 3.55
1886 1928 0.459411 CACGCATCCACGTCACCATA 60.459 55.000 0.00 0.00 46.34 2.74
1887 1929 0.248012 ACGCATCCACGTCACCATAA 59.752 50.000 0.00 0.00 44.43 1.90
1888 1930 1.134521 ACGCATCCACGTCACCATAAT 60.135 47.619 0.00 0.00 44.43 1.28
1889 1931 2.101750 ACGCATCCACGTCACCATAATA 59.898 45.455 0.00 0.00 44.43 0.98
1890 1932 3.127589 CGCATCCACGTCACCATAATAA 58.872 45.455 0.00 0.00 0.00 1.40
1891 1933 3.558006 CGCATCCACGTCACCATAATAAA 59.442 43.478 0.00 0.00 0.00 1.40
1892 1934 4.213270 CGCATCCACGTCACCATAATAAAT 59.787 41.667 0.00 0.00 0.00 1.40
1893 1935 5.277779 CGCATCCACGTCACCATAATAAATT 60.278 40.000 0.00 0.00 0.00 1.82
1894 1936 6.503524 GCATCCACGTCACCATAATAAATTT 58.496 36.000 0.00 0.00 0.00 1.82
1895 1937 6.636850 GCATCCACGTCACCATAATAAATTTC 59.363 38.462 0.00 0.00 0.00 2.17
1896 1938 7.680827 GCATCCACGTCACCATAATAAATTTCA 60.681 37.037 0.00 0.00 0.00 2.69
1897 1939 7.315247 TCCACGTCACCATAATAAATTTCAG 57.685 36.000 0.00 0.00 0.00 3.02
1898 1940 5.971202 CCACGTCACCATAATAAATTTCAGC 59.029 40.000 0.00 0.00 0.00 4.26
1899 1941 5.971202 CACGTCACCATAATAAATTTCAGCC 59.029 40.000 0.00 0.00 0.00 4.85
1900 1942 5.204833 CGTCACCATAATAAATTTCAGCCG 58.795 41.667 0.00 0.00 0.00 5.52
1901 1943 5.220777 CGTCACCATAATAAATTTCAGCCGT 60.221 40.000 0.00 0.00 0.00 5.68
1902 1944 6.560711 GTCACCATAATAAATTTCAGCCGTT 58.439 36.000 0.00 0.00 0.00 4.44
1903 1945 7.033185 GTCACCATAATAAATTTCAGCCGTTT 58.967 34.615 0.00 0.00 0.00 3.60
1904 1946 7.009174 GTCACCATAATAAATTTCAGCCGTTTG 59.991 37.037 0.00 0.00 0.00 2.93
1905 1947 7.032580 CACCATAATAAATTTCAGCCGTTTGA 58.967 34.615 0.00 0.00 0.00 2.69
1906 1948 7.706179 CACCATAATAAATTTCAGCCGTTTGAT 59.294 33.333 0.00 0.00 0.00 2.57
1907 1949 8.257306 ACCATAATAAATTTCAGCCGTTTGATT 58.743 29.630 0.00 0.00 0.00 2.57
1908 1950 8.542132 CCATAATAAATTTCAGCCGTTTGATTG 58.458 33.333 0.00 0.00 0.00 2.67
1909 1951 9.299963 CATAATAAATTTCAGCCGTTTGATTGA 57.700 29.630 0.00 0.00 0.00 2.57
1910 1952 7.581011 AATAAATTTCAGCCGTTTGATTGAC 57.419 32.000 0.00 0.00 0.00 3.18
1911 1953 3.575965 ATTTCAGCCGTTTGATTGACC 57.424 42.857 0.00 0.00 0.00 4.02
1912 1954 1.974265 TTCAGCCGTTTGATTGACCA 58.026 45.000 0.00 0.00 0.00 4.02
1913 1955 1.234821 TCAGCCGTTTGATTGACCAC 58.765 50.000 0.00 0.00 0.00 4.16
1914 1956 0.110238 CAGCCGTTTGATTGACCACG 60.110 55.000 0.00 0.00 0.00 4.94
1916 1958 1.873165 CCGTTTGATTGACCACGGG 59.127 57.895 1.55 0.00 46.92 5.28
1917 1959 0.887387 CCGTTTGATTGACCACGGGT 60.887 55.000 1.55 0.00 46.92 5.28
1918 1960 0.237235 CGTTTGATTGACCACGGGTG 59.763 55.000 0.00 0.00 35.25 4.61
1919 1961 1.600023 GTTTGATTGACCACGGGTGA 58.400 50.000 0.00 0.00 35.25 4.02
1920 1962 1.265905 GTTTGATTGACCACGGGTGAC 59.734 52.381 0.00 0.00 35.25 3.67
1921 1963 0.762418 TTGATTGACCACGGGTGACT 59.238 50.000 0.00 0.00 35.25 3.41
1922 1964 0.320374 TGATTGACCACGGGTGACTC 59.680 55.000 0.00 0.00 35.25 3.36
1923 1965 0.320374 GATTGACCACGGGTGACTCA 59.680 55.000 0.00 0.00 35.25 3.41
1924 1966 0.321671 ATTGACCACGGGTGACTCAG 59.678 55.000 0.00 0.00 35.25 3.35
1925 1967 0.757561 TTGACCACGGGTGACTCAGA 60.758 55.000 0.00 0.00 35.25 3.27
1926 1968 0.541998 TGACCACGGGTGACTCAGAT 60.542 55.000 0.00 0.00 35.25 2.90
1927 1969 0.173708 GACCACGGGTGACTCAGATC 59.826 60.000 0.00 0.00 35.25 2.75
1928 1970 0.251832 ACCACGGGTGACTCAGATCT 60.252 55.000 0.00 0.00 32.98 2.75
1929 1971 0.174389 CCACGGGTGACTCAGATCTG 59.826 60.000 17.07 17.07 0.00 2.90
1930 1972 0.459237 CACGGGTGACTCAGATCTGC 60.459 60.000 18.36 4.87 0.00 4.26
1931 1973 1.226802 CGGGTGACTCAGATCTGCG 60.227 63.158 18.36 14.69 0.00 5.18
1932 1974 1.142748 GGGTGACTCAGATCTGCGG 59.857 63.158 18.36 14.64 0.00 5.69
1933 1975 1.520342 GGTGACTCAGATCTGCGGC 60.520 63.158 18.36 15.09 0.00 6.53
1934 1976 1.875813 GTGACTCAGATCTGCGGCG 60.876 63.158 18.36 0.51 0.00 6.46
1935 1977 2.959071 GACTCAGATCTGCGGCGC 60.959 66.667 27.44 27.44 0.00 6.53
1936 1978 3.706563 GACTCAGATCTGCGGCGCA 62.707 63.158 34.06 34.06 36.92 6.09
1937 1979 2.510012 CTCAGATCTGCGGCGCAA 60.510 61.111 35.41 24.95 38.41 4.85
1938 1980 2.510012 TCAGATCTGCGGCGCAAG 60.510 61.111 35.41 26.80 38.41 4.01
1972 2014 4.003788 CTCCAGGACCCGCACGTT 62.004 66.667 0.00 0.00 0.00 3.99
1973 2015 4.308458 TCCAGGACCCGCACGTTG 62.308 66.667 0.00 0.00 0.00 4.10
1974 2016 4.308458 CCAGGACCCGCACGTTGA 62.308 66.667 0.00 0.00 0.00 3.18
1975 2017 2.280524 CAGGACCCGCACGTTGAA 60.281 61.111 0.00 0.00 0.00 2.69
1976 2018 2.030562 AGGACCCGCACGTTGAAG 59.969 61.111 0.00 0.00 0.00 3.02
1977 2019 2.029964 GGACCCGCACGTTGAAGA 59.970 61.111 0.00 0.00 0.00 2.87
1978 2020 2.315386 GGACCCGCACGTTGAAGAC 61.315 63.158 0.00 0.00 0.00 3.01
1979 2021 1.300697 GACCCGCACGTTGAAGACT 60.301 57.895 0.00 0.00 0.00 3.24
1980 2022 1.282930 GACCCGCACGTTGAAGACTC 61.283 60.000 0.00 0.00 0.00 3.36
1981 2023 1.006102 CCCGCACGTTGAAGACTCT 60.006 57.895 0.00 0.00 0.00 3.24
1982 2024 0.600255 CCCGCACGTTGAAGACTCTT 60.600 55.000 0.00 0.00 0.00 2.85
1983 2025 0.784778 CCGCACGTTGAAGACTCTTC 59.215 55.000 11.37 11.37 0.00 2.87
1984 2026 0.784778 CGCACGTTGAAGACTCTTCC 59.215 55.000 14.98 1.50 0.00 3.46
1985 2027 1.865865 GCACGTTGAAGACTCTTCCA 58.134 50.000 14.98 2.65 0.00 3.53
1986 2028 2.417719 GCACGTTGAAGACTCTTCCAT 58.582 47.619 14.98 0.00 0.00 3.41
1987 2029 2.413453 GCACGTTGAAGACTCTTCCATC 59.587 50.000 14.98 5.85 0.00 3.51
1988 2030 2.663602 CACGTTGAAGACTCTTCCATCG 59.336 50.000 14.98 16.60 0.00 3.84
1989 2031 2.296471 ACGTTGAAGACTCTTCCATCGT 59.704 45.455 14.98 17.10 32.33 3.73
1990 2032 2.917971 CGTTGAAGACTCTTCCATCGTC 59.082 50.000 14.98 0.00 0.00 4.20
1991 2033 3.366476 CGTTGAAGACTCTTCCATCGTCT 60.366 47.826 14.98 0.00 39.53 4.18
1992 2034 4.170256 GTTGAAGACTCTTCCATCGTCTC 58.830 47.826 14.98 0.00 37.04 3.36
1993 2035 2.755655 TGAAGACTCTTCCATCGTCTCC 59.244 50.000 14.98 0.00 37.04 3.71
1994 2036 2.818751 AGACTCTTCCATCGTCTCCT 57.181 50.000 0.00 0.00 32.93 3.69
1995 2037 2.650322 AGACTCTTCCATCGTCTCCTC 58.350 52.381 0.00 0.00 32.93 3.71
1996 2038 1.332375 GACTCTTCCATCGTCTCCTCG 59.668 57.143 0.00 0.00 0.00 4.63
1997 2039 0.030101 CTCTTCCATCGTCTCCTCGC 59.970 60.000 0.00 0.00 0.00 5.03
1998 2040 1.066587 CTTCCATCGTCTCCTCGCC 59.933 63.158 0.00 0.00 0.00 5.54
1999 2041 1.379977 TTCCATCGTCTCCTCGCCT 60.380 57.895 0.00 0.00 0.00 5.52
2000 2042 1.384989 TTCCATCGTCTCCTCGCCTC 61.385 60.000 0.00 0.00 0.00 4.70
2001 2043 2.725008 CATCGTCTCCTCGCCTCC 59.275 66.667 0.00 0.00 0.00 4.30
2002 2044 1.826054 CATCGTCTCCTCGCCTCCT 60.826 63.158 0.00 0.00 0.00 3.69
2003 2045 1.527380 ATCGTCTCCTCGCCTCCTC 60.527 63.158 0.00 0.00 0.00 3.71
2004 2046 2.272230 ATCGTCTCCTCGCCTCCTCA 62.272 60.000 0.00 0.00 0.00 3.86
2005 2047 2.046864 CGTCTCCTCGCCTCCTCAA 61.047 63.158 0.00 0.00 0.00 3.02
2006 2048 1.595993 CGTCTCCTCGCCTCCTCAAA 61.596 60.000 0.00 0.00 0.00 2.69
2007 2049 0.608640 GTCTCCTCGCCTCCTCAAAA 59.391 55.000 0.00 0.00 0.00 2.44
2008 2050 0.608640 TCTCCTCGCCTCCTCAAAAC 59.391 55.000 0.00 0.00 0.00 2.43
2009 2051 0.737715 CTCCTCGCCTCCTCAAAACG 60.738 60.000 0.00 0.00 0.00 3.60
2010 2052 2.391389 CCTCGCCTCCTCAAAACGC 61.391 63.158 0.00 0.00 0.00 4.84
2011 2053 2.730672 CTCGCCTCCTCAAAACGCG 61.731 63.158 3.53 3.53 44.00 6.01
2012 2054 4.445545 CGCCTCCTCAAAACGCGC 62.446 66.667 5.73 0.00 36.02 6.86
2013 2055 3.353836 GCCTCCTCAAAACGCGCA 61.354 61.111 5.73 0.00 0.00 6.09
2014 2056 2.556287 CCTCCTCAAAACGCGCAC 59.444 61.111 5.73 0.00 0.00 5.34
2015 2057 2.556287 CTCCTCAAAACGCGCACC 59.444 61.111 5.73 0.00 0.00 5.01
2016 2058 1.961277 CTCCTCAAAACGCGCACCT 60.961 57.895 5.73 0.00 0.00 4.00
2017 2059 0.669318 CTCCTCAAAACGCGCACCTA 60.669 55.000 5.73 0.00 0.00 3.08
2018 2060 0.947180 TCCTCAAAACGCGCACCTAC 60.947 55.000 5.73 0.00 0.00 3.18
2019 2061 1.495951 CTCAAAACGCGCACCTACC 59.504 57.895 5.73 0.00 0.00 3.18
2020 2062 1.908066 CTCAAAACGCGCACCTACCC 61.908 60.000 5.73 0.00 0.00 3.69
2021 2063 1.964373 CAAAACGCGCACCTACCCT 60.964 57.895 5.73 0.00 0.00 4.34
2022 2064 1.228033 AAAACGCGCACCTACCCTT 60.228 52.632 5.73 0.00 0.00 3.95
2023 2065 1.232621 AAAACGCGCACCTACCCTTC 61.233 55.000 5.73 0.00 0.00 3.46
2024 2066 3.600898 AACGCGCACCTACCCTTCC 62.601 63.158 5.73 0.00 0.00 3.46
2025 2067 4.832608 CGCGCACCTACCCTTCCC 62.833 72.222 8.75 0.00 0.00 3.97
2026 2068 3.400054 GCGCACCTACCCTTCCCT 61.400 66.667 0.30 0.00 0.00 4.20
2027 2069 2.901042 CGCACCTACCCTTCCCTC 59.099 66.667 0.00 0.00 0.00 4.30
2028 2070 1.686110 CGCACCTACCCTTCCCTCT 60.686 63.158 0.00 0.00 0.00 3.69
2029 2071 1.265454 CGCACCTACCCTTCCCTCTT 61.265 60.000 0.00 0.00 0.00 2.85
2030 2072 0.542333 GCACCTACCCTTCCCTCTTC 59.458 60.000 0.00 0.00 0.00 2.87
2031 2073 1.952621 CACCTACCCTTCCCTCTTCA 58.047 55.000 0.00 0.00 0.00 3.02
2032 2074 1.834263 CACCTACCCTTCCCTCTTCAG 59.166 57.143 0.00 0.00 0.00 3.02
2033 2075 1.722851 ACCTACCCTTCCCTCTTCAGA 59.277 52.381 0.00 0.00 0.00 3.27
2034 2076 2.319438 ACCTACCCTTCCCTCTTCAGAT 59.681 50.000 0.00 0.00 0.00 2.90
2035 2077 3.246535 ACCTACCCTTCCCTCTTCAGATT 60.247 47.826 0.00 0.00 0.00 2.40
2036 2078 3.389656 CCTACCCTTCCCTCTTCAGATTC 59.610 52.174 0.00 0.00 0.00 2.52
2037 2079 2.200955 ACCCTTCCCTCTTCAGATTCC 58.799 52.381 0.00 0.00 0.00 3.01
2038 2080 1.492599 CCCTTCCCTCTTCAGATTCCC 59.507 57.143 0.00 0.00 0.00 3.97
2039 2081 1.492599 CCTTCCCTCTTCAGATTCCCC 59.507 57.143 0.00 0.00 0.00 4.81
2040 2082 2.200081 CTTCCCTCTTCAGATTCCCCA 58.800 52.381 0.00 0.00 0.00 4.96
2041 2083 2.359376 TCCCTCTTCAGATTCCCCAA 57.641 50.000 0.00 0.00 0.00 4.12
2042 2084 2.863884 TCCCTCTTCAGATTCCCCAAT 58.136 47.619 0.00 0.00 0.00 3.16
2043 2085 3.201363 TCCCTCTTCAGATTCCCCAATT 58.799 45.455 0.00 0.00 0.00 2.32
2044 2086 3.597868 TCCCTCTTCAGATTCCCCAATTT 59.402 43.478 0.00 0.00 0.00 1.82
2045 2087 4.793520 TCCCTCTTCAGATTCCCCAATTTA 59.206 41.667 0.00 0.00 0.00 1.40
2046 2088 5.436374 TCCCTCTTCAGATTCCCCAATTTAT 59.564 40.000 0.00 0.00 0.00 1.40
2047 2089 5.537674 CCCTCTTCAGATTCCCCAATTTATG 59.462 44.000 0.00 0.00 0.00 1.90
2048 2090 5.010415 CCTCTTCAGATTCCCCAATTTATGC 59.990 44.000 0.00 0.00 0.00 3.14
2049 2091 4.580167 TCTTCAGATTCCCCAATTTATGCG 59.420 41.667 0.00 0.00 0.00 4.73
2050 2092 3.897239 TCAGATTCCCCAATTTATGCGT 58.103 40.909 0.00 0.00 0.00 5.24
2051 2093 4.277476 TCAGATTCCCCAATTTATGCGTT 58.723 39.130 0.00 0.00 0.00 4.84
2052 2094 4.338118 TCAGATTCCCCAATTTATGCGTTC 59.662 41.667 0.00 0.00 0.00 3.95
2053 2095 4.339247 CAGATTCCCCAATTTATGCGTTCT 59.661 41.667 0.00 0.00 0.00 3.01
2054 2096 4.580580 AGATTCCCCAATTTATGCGTTCTC 59.419 41.667 0.00 0.00 0.00 2.87
2055 2097 2.650322 TCCCCAATTTATGCGTTCTCC 58.350 47.619 0.00 0.00 0.00 3.71
2056 2098 2.241176 TCCCCAATTTATGCGTTCTCCT 59.759 45.455 0.00 0.00 0.00 3.69
2057 2099 2.618709 CCCCAATTTATGCGTTCTCCTC 59.381 50.000 0.00 0.00 0.00 3.71
2058 2100 3.545703 CCCAATTTATGCGTTCTCCTCT 58.454 45.455 0.00 0.00 0.00 3.69
2059 2101 3.947834 CCCAATTTATGCGTTCTCCTCTT 59.052 43.478 0.00 0.00 0.00 2.85
2060 2102 4.035675 CCCAATTTATGCGTTCTCCTCTTC 59.964 45.833 0.00 0.00 0.00 2.87
2061 2103 4.878397 CCAATTTATGCGTTCTCCTCTTCT 59.122 41.667 0.00 0.00 0.00 2.85
2062 2104 5.007136 CCAATTTATGCGTTCTCCTCTTCTC 59.993 44.000 0.00 0.00 0.00 2.87
2063 2105 3.802948 TTATGCGTTCTCCTCTTCTCC 57.197 47.619 0.00 0.00 0.00 3.71
2064 2106 1.859302 ATGCGTTCTCCTCTTCTCCT 58.141 50.000 0.00 0.00 0.00 3.69
2065 2107 1.633774 TGCGTTCTCCTCTTCTCCTT 58.366 50.000 0.00 0.00 0.00 3.36
2066 2108 1.546476 TGCGTTCTCCTCTTCTCCTTC 59.454 52.381 0.00 0.00 0.00 3.46
2067 2109 1.134936 GCGTTCTCCTCTTCTCCTTCC 60.135 57.143 0.00 0.00 0.00 3.46
2068 2110 2.171840 CGTTCTCCTCTTCTCCTTCCA 58.828 52.381 0.00 0.00 0.00 3.53
2069 2111 2.763448 CGTTCTCCTCTTCTCCTTCCAT 59.237 50.000 0.00 0.00 0.00 3.41
2070 2112 3.181480 CGTTCTCCTCTTCTCCTTCCATC 60.181 52.174 0.00 0.00 0.00 3.51
2071 2113 3.039252 TCTCCTCTTCTCCTTCCATCC 57.961 52.381 0.00 0.00 0.00 3.51
2072 2114 2.046292 CTCCTCTTCTCCTTCCATCCC 58.954 57.143 0.00 0.00 0.00 3.85
2073 2115 1.653918 TCCTCTTCTCCTTCCATCCCT 59.346 52.381 0.00 0.00 0.00 4.20
2074 2116 2.046292 CCTCTTCTCCTTCCATCCCTC 58.954 57.143 0.00 0.00 0.00 4.30
2075 2117 2.046292 CTCTTCTCCTTCCATCCCTCC 58.954 57.143 0.00 0.00 0.00 4.30
2076 2118 1.135960 CTTCTCCTTCCATCCCTCCC 58.864 60.000 0.00 0.00 0.00 4.30
2077 2119 0.725133 TTCTCCTTCCATCCCTCCCT 59.275 55.000 0.00 0.00 0.00 4.20
2078 2120 0.030705 TCTCCTTCCATCCCTCCCTG 60.031 60.000 0.00 0.00 0.00 4.45
2079 2121 1.694169 TCCTTCCATCCCTCCCTGC 60.694 63.158 0.00 0.00 0.00 4.85
2080 2122 2.761465 CCTTCCATCCCTCCCTGCC 61.761 68.421 0.00 0.00 0.00 4.85
2081 2123 2.002977 CTTCCATCCCTCCCTGCCA 61.003 63.158 0.00 0.00 0.00 4.92
2082 2124 1.543642 TTCCATCCCTCCCTGCCAA 60.544 57.895 0.00 0.00 0.00 4.52
2083 2125 1.863155 TTCCATCCCTCCCTGCCAAC 61.863 60.000 0.00 0.00 0.00 3.77
2084 2126 2.124570 CATCCCTCCCTGCCAACG 60.125 66.667 0.00 0.00 0.00 4.10
2085 2127 2.610859 ATCCCTCCCTGCCAACGT 60.611 61.111 0.00 0.00 0.00 3.99
2086 2128 2.231380 ATCCCTCCCTGCCAACGTT 61.231 57.895 0.00 0.00 0.00 3.99
2087 2129 1.789576 ATCCCTCCCTGCCAACGTTT 61.790 55.000 0.00 0.00 0.00 3.60
2088 2130 1.971695 CCCTCCCTGCCAACGTTTC 60.972 63.158 0.00 0.00 0.00 2.78
2089 2131 1.228124 CCTCCCTGCCAACGTTTCA 60.228 57.895 0.00 0.00 0.00 2.69
2090 2132 0.821711 CCTCCCTGCCAACGTTTCAA 60.822 55.000 0.00 0.00 0.00 2.69
2091 2133 1.247567 CTCCCTGCCAACGTTTCAAT 58.752 50.000 0.00 0.00 0.00 2.57
2092 2134 1.200020 CTCCCTGCCAACGTTTCAATC 59.800 52.381 0.00 0.00 0.00 2.67
2093 2135 1.202879 TCCCTGCCAACGTTTCAATCT 60.203 47.619 0.00 0.00 0.00 2.40
2094 2136 1.200020 CCCTGCCAACGTTTCAATCTC 59.800 52.381 0.00 0.00 0.00 2.75
2095 2137 1.200020 CCTGCCAACGTTTCAATCTCC 59.800 52.381 0.00 0.00 0.00 3.71
2096 2138 1.200020 CTGCCAACGTTTCAATCTCCC 59.800 52.381 0.00 0.00 0.00 4.30
2097 2139 0.168128 GCCAACGTTTCAATCTCCCG 59.832 55.000 0.00 0.00 0.00 5.14
2098 2140 1.803334 CCAACGTTTCAATCTCCCGA 58.197 50.000 0.00 0.00 0.00 5.14
2099 2141 2.356135 CCAACGTTTCAATCTCCCGAT 58.644 47.619 0.00 0.00 0.00 4.18
2100 2142 2.351726 CCAACGTTTCAATCTCCCGATC 59.648 50.000 0.00 0.00 0.00 3.69
2101 2143 3.262420 CAACGTTTCAATCTCCCGATCT 58.738 45.455 0.00 0.00 0.00 2.75
2102 2144 3.166489 ACGTTTCAATCTCCCGATCTC 57.834 47.619 0.00 0.00 0.00 2.75
2103 2145 2.159085 ACGTTTCAATCTCCCGATCTCC 60.159 50.000 0.00 0.00 0.00 3.71
2104 2146 2.803492 CGTTTCAATCTCCCGATCTCCC 60.803 54.545 0.00 0.00 0.00 4.30
2105 2147 1.424638 TTCAATCTCCCGATCTCCCC 58.575 55.000 0.00 0.00 0.00 4.81
2106 2148 0.264657 TCAATCTCCCGATCTCCCCA 59.735 55.000 0.00 0.00 0.00 4.96
2107 2149 1.132721 TCAATCTCCCGATCTCCCCAT 60.133 52.381 0.00 0.00 0.00 4.00
2108 2150 1.277557 CAATCTCCCGATCTCCCCATC 59.722 57.143 0.00 0.00 0.00 3.51
2109 2151 0.489117 ATCTCCCGATCTCCCCATCA 59.511 55.000 0.00 0.00 0.00 3.07
2110 2152 0.470080 TCTCCCGATCTCCCCATCAC 60.470 60.000 0.00 0.00 0.00 3.06
2111 2153 1.459539 TCCCGATCTCCCCATCACC 60.460 63.158 0.00 0.00 0.00 4.02
2112 2154 1.766059 CCCGATCTCCCCATCACCA 60.766 63.158 0.00 0.00 0.00 4.17
2113 2155 1.447643 CCGATCTCCCCATCACCAC 59.552 63.158 0.00 0.00 0.00 4.16
2114 2156 1.337384 CCGATCTCCCCATCACCACA 61.337 60.000 0.00 0.00 0.00 4.17
2115 2157 0.541392 CGATCTCCCCATCACCACAA 59.459 55.000 0.00 0.00 0.00 3.33
2116 2158 1.065491 CGATCTCCCCATCACCACAAA 60.065 52.381 0.00 0.00 0.00 2.83
2117 2159 2.369394 GATCTCCCCATCACCACAAAC 58.631 52.381 0.00 0.00 0.00 2.93
2118 2160 1.144691 TCTCCCCATCACCACAAACA 58.855 50.000 0.00 0.00 0.00 2.83
2119 2161 1.202879 TCTCCCCATCACCACAAACAC 60.203 52.381 0.00 0.00 0.00 3.32
2120 2162 0.553333 TCCCCATCACCACAAACACA 59.447 50.000 0.00 0.00 0.00 3.72
2121 2163 0.673437 CCCCATCACCACAAACACAC 59.327 55.000 0.00 0.00 0.00 3.82
2122 2164 1.397672 CCCATCACCACAAACACACA 58.602 50.000 0.00 0.00 0.00 3.72
2123 2165 1.962807 CCCATCACCACAAACACACAT 59.037 47.619 0.00 0.00 0.00 3.21
2124 2166 2.288334 CCCATCACCACAAACACACATG 60.288 50.000 0.00 0.00 0.00 3.21
2125 2167 2.288334 CCATCACCACAAACACACATGG 60.288 50.000 0.00 0.00 38.26 3.66
2126 2168 2.426842 TCACCACAAACACACATGGA 57.573 45.000 0.00 0.00 36.04 3.41
2127 2169 2.728007 TCACCACAAACACACATGGAA 58.272 42.857 0.00 0.00 36.04 3.53
2128 2170 2.425312 TCACCACAAACACACATGGAAC 59.575 45.455 0.00 0.00 36.04 3.62
2129 2171 1.403679 ACCACAAACACACATGGAACG 59.596 47.619 0.00 0.00 36.04 3.95
2130 2172 1.268999 CCACAAACACACATGGAACGG 60.269 52.381 0.00 0.00 33.80 4.44
2131 2173 1.673400 CACAAACACACATGGAACGGA 59.327 47.619 0.00 0.00 0.00 4.69
2132 2174 2.293122 CACAAACACACATGGAACGGAT 59.707 45.455 0.00 0.00 0.00 4.18
2133 2175 2.293122 ACAAACACACATGGAACGGATG 59.707 45.455 0.00 0.00 0.00 3.51
2134 2176 1.533625 AACACACATGGAACGGATGG 58.466 50.000 0.00 0.00 0.00 3.51
2135 2177 0.960364 ACACACATGGAACGGATGGC 60.960 55.000 0.00 0.00 0.00 4.40
2136 2178 1.745115 ACACATGGAACGGATGGCG 60.745 57.895 0.00 0.00 0.00 5.69
2137 2179 2.124736 ACATGGAACGGATGGCGG 60.125 61.111 0.00 0.00 0.00 6.13
2138 2180 3.585990 CATGGAACGGATGGCGGC 61.586 66.667 0.00 0.00 0.00 6.53
2139 2181 4.108299 ATGGAACGGATGGCGGCA 62.108 61.111 16.34 16.34 0.00 5.69
2140 2182 3.420206 ATGGAACGGATGGCGGCAT 62.420 57.895 26.11 26.11 0.00 4.40
2141 2183 3.585990 GGAACGGATGGCGGCATG 61.586 66.667 30.87 18.20 0.00 4.06
2142 2184 4.256090 GAACGGATGGCGGCATGC 62.256 66.667 30.87 30.28 45.38 4.06
2151 2193 3.440151 GCGGCATGCATCCATCTT 58.560 55.556 21.36 0.00 45.45 2.40
2152 2194 1.285023 GCGGCATGCATCCATCTTC 59.715 57.895 21.36 0.00 45.45 2.87
2153 2195 1.449726 GCGGCATGCATCCATCTTCA 61.450 55.000 21.36 0.00 45.45 3.02
2154 2196 1.244816 CGGCATGCATCCATCTTCAT 58.755 50.000 21.36 0.00 0.00 2.57
2155 2197 1.199327 CGGCATGCATCCATCTTCATC 59.801 52.381 21.36 0.00 0.00 2.92
2156 2198 2.235891 GGCATGCATCCATCTTCATCA 58.764 47.619 21.36 0.00 0.00 3.07
2157 2199 2.030185 GGCATGCATCCATCTTCATCAC 60.030 50.000 21.36 0.00 0.00 3.06
2158 2200 2.030185 GCATGCATCCATCTTCATCACC 60.030 50.000 14.21 0.00 0.00 4.02
2159 2201 2.353357 TGCATCCATCTTCATCACCC 57.647 50.000 0.00 0.00 0.00 4.61
2160 2202 1.565288 TGCATCCATCTTCATCACCCA 59.435 47.619 0.00 0.00 0.00 4.51
2161 2203 2.176148 TGCATCCATCTTCATCACCCAT 59.824 45.455 0.00 0.00 0.00 4.00
2162 2204 2.818432 GCATCCATCTTCATCACCCATC 59.182 50.000 0.00 0.00 0.00 3.51
2163 2205 3.418995 CATCCATCTTCATCACCCATCC 58.581 50.000 0.00 0.00 0.00 3.51
2164 2206 2.490961 TCCATCTTCATCACCCATCCA 58.509 47.619 0.00 0.00 0.00 3.41
2165 2207 2.440627 TCCATCTTCATCACCCATCCAG 59.559 50.000 0.00 0.00 0.00 3.86
2166 2208 2.488528 CCATCTTCATCACCCATCCAGG 60.489 54.545 0.00 0.00 37.03 4.45
2179 2221 2.634453 CCATCCAGGGATTTTATTGCCC 59.366 50.000 0.00 0.00 42.37 5.36
2180 2222 3.307506 CATCCAGGGATTTTATTGCCCA 58.692 45.455 0.00 0.00 44.55 5.36
2181 2223 3.704545 TCCAGGGATTTTATTGCCCAT 57.295 42.857 0.00 0.00 44.55 4.00
2182 2224 3.575805 TCCAGGGATTTTATTGCCCATC 58.424 45.455 0.00 0.00 44.55 3.51
2183 2225 3.207321 TCCAGGGATTTTATTGCCCATCT 59.793 43.478 0.00 0.00 44.55 2.90
2184 2226 3.575687 CCAGGGATTTTATTGCCCATCTC 59.424 47.826 0.00 0.00 44.55 2.75
2185 2227 3.575687 CAGGGATTTTATTGCCCATCTCC 59.424 47.826 0.00 0.00 44.55 3.71
2186 2228 3.468625 AGGGATTTTATTGCCCATCTCCT 59.531 43.478 0.00 0.00 44.55 3.69
2187 2229 4.078395 AGGGATTTTATTGCCCATCTCCTT 60.078 41.667 0.00 0.00 44.55 3.36
2188 2230 4.281941 GGGATTTTATTGCCCATCTCCTTC 59.718 45.833 0.00 0.00 41.64 3.46
2189 2231 5.143369 GGATTTTATTGCCCATCTCCTTCT 58.857 41.667 0.00 0.00 0.00 2.85
2190 2232 6.306987 GGATTTTATTGCCCATCTCCTTCTA 58.693 40.000 0.00 0.00 0.00 2.10
2191 2233 6.432472 GGATTTTATTGCCCATCTCCTTCTAG 59.568 42.308 0.00 0.00 0.00 2.43
2192 2234 5.975988 TTTATTGCCCATCTCCTTCTAGT 57.024 39.130 0.00 0.00 0.00 2.57
2193 2235 3.853355 ATTGCCCATCTCCTTCTAGTG 57.147 47.619 0.00 0.00 0.00 2.74
2194 2236 2.550277 TGCCCATCTCCTTCTAGTGA 57.450 50.000 0.00 0.00 0.00 3.41
2195 2237 3.051940 TGCCCATCTCCTTCTAGTGAT 57.948 47.619 0.00 0.00 0.00 3.06
2196 2238 2.702478 TGCCCATCTCCTTCTAGTGATG 59.298 50.000 0.00 0.00 36.87 3.07
2201 2243 5.212532 CATCTCCTTCTAGTGATGGGAAG 57.787 47.826 0.00 0.00 37.89 3.46
2202 2244 4.609866 TCTCCTTCTAGTGATGGGAAGA 57.390 45.455 0.00 0.00 38.82 2.87
2203 2245 4.947883 TCTCCTTCTAGTGATGGGAAGAA 58.052 43.478 0.00 0.00 38.82 2.52
2204 2246 4.959210 TCTCCTTCTAGTGATGGGAAGAAG 59.041 45.833 0.00 4.35 38.82 2.85
2205 2247 4.414337 CCTTCTAGTGATGGGAAGAAGG 57.586 50.000 13.83 13.83 43.96 3.46
2206 2248 3.135530 CCTTCTAGTGATGGGAAGAAGGG 59.864 52.174 18.17 4.34 45.00 3.95
2207 2249 2.119495 TCTAGTGATGGGAAGAAGGGC 58.881 52.381 0.00 0.00 0.00 5.19
2208 2250 0.830648 TAGTGATGGGAAGAAGGGCG 59.169 55.000 0.00 0.00 0.00 6.13
2209 2251 1.452108 GTGATGGGAAGAAGGGCGG 60.452 63.158 0.00 0.00 0.00 6.13
2210 2252 2.517166 GATGGGAAGAAGGGCGGC 60.517 66.667 0.00 0.00 0.00 6.53
2211 2253 3.017581 ATGGGAAGAAGGGCGGCT 61.018 61.111 9.56 0.00 0.00 5.52
2212 2254 3.350031 ATGGGAAGAAGGGCGGCTG 62.350 63.158 9.56 0.00 0.00 4.85
2214 2256 4.722700 GGAAGAAGGGCGGCTGCA 62.723 66.667 21.31 0.00 45.35 4.41
2215 2257 2.439156 GAAGAAGGGCGGCTGCAT 60.439 61.111 21.31 3.91 45.35 3.96
2216 2258 2.439156 AAGAAGGGCGGCTGCATC 60.439 61.111 21.31 14.04 45.35 3.91
2217 2259 2.883267 GAAGAAGGGCGGCTGCATCT 62.883 60.000 21.31 16.13 45.35 2.90
2218 2260 2.439156 GAAGGGCGGCTGCATCTT 60.439 61.111 21.31 20.89 45.35 2.40
2219 2261 2.439156 AAGGGCGGCTGCATCTTC 60.439 61.111 21.31 0.24 45.35 2.87
2220 2262 2.883267 GAAGGGCGGCTGCATCTTCT 62.883 60.000 29.77 14.72 43.46 2.85
2221 2263 2.439156 GGGCGGCTGCATCTTCTT 60.439 61.111 21.31 0.00 45.35 2.52
2222 2264 2.476320 GGGCGGCTGCATCTTCTTC 61.476 63.158 21.31 0.00 45.35 2.87
2223 2265 1.451028 GGCGGCTGCATCTTCTTCT 60.451 57.895 21.31 0.00 45.35 2.85
2224 2266 1.028868 GGCGGCTGCATCTTCTTCTT 61.029 55.000 21.31 0.00 45.35 2.52
2225 2267 0.376502 GCGGCTGCATCTTCTTCTTC 59.623 55.000 14.08 0.00 42.15 2.87
2226 2268 1.012841 CGGCTGCATCTTCTTCTTCC 58.987 55.000 0.50 0.00 0.00 3.46
2227 2269 1.387539 GGCTGCATCTTCTTCTTCCC 58.612 55.000 0.50 0.00 0.00 3.97
2228 2270 1.064832 GGCTGCATCTTCTTCTTCCCT 60.065 52.381 0.50 0.00 0.00 4.20
2229 2271 2.171448 GGCTGCATCTTCTTCTTCCCTA 59.829 50.000 0.50 0.00 0.00 3.53
2230 2272 3.465871 GCTGCATCTTCTTCTTCCCTAG 58.534 50.000 0.00 0.00 0.00 3.02
2231 2273 3.465871 CTGCATCTTCTTCTTCCCTAGC 58.534 50.000 0.00 0.00 0.00 3.42
2232 2274 2.159043 TGCATCTTCTTCTTCCCTAGCG 60.159 50.000 0.00 0.00 0.00 4.26
2233 2275 2.478831 CATCTTCTTCTTCCCTAGCGC 58.521 52.381 0.00 0.00 0.00 5.92
2234 2276 0.824759 TCTTCTTCTTCCCTAGCGCC 59.175 55.000 2.29 0.00 0.00 6.53
2235 2277 0.528684 CTTCTTCTTCCCTAGCGCCG 60.529 60.000 2.29 0.00 0.00 6.46
2236 2278 1.956629 TTCTTCTTCCCTAGCGCCGG 61.957 60.000 2.29 4.78 0.00 6.13
2237 2279 4.157120 TTCTTCCCTAGCGCCGGC 62.157 66.667 19.07 19.07 40.37 6.13
2256 2298 1.148310 CTACCTCAGCAAACACCACG 58.852 55.000 0.00 0.00 0.00 4.94
2257 2299 0.250124 TACCTCAGCAAACACCACGG 60.250 55.000 0.00 0.00 0.00 4.94
2258 2300 1.227823 CCTCAGCAAACACCACGGA 60.228 57.895 0.00 0.00 0.00 4.69
2259 2301 0.606401 CCTCAGCAAACACCACGGAT 60.606 55.000 0.00 0.00 0.00 4.18
2260 2302 0.518636 CTCAGCAAACACCACGGATG 59.481 55.000 0.00 0.00 0.00 3.51
2277 2319 1.685224 TGGCATCTCCACCACTTCC 59.315 57.895 0.00 0.00 40.72 3.46
2278 2320 1.077429 GGCATCTCCACCACTTCCC 60.077 63.158 0.00 0.00 34.01 3.97
2279 2321 1.077429 GCATCTCCACCACTTCCCC 60.077 63.158 0.00 0.00 0.00 4.81
2280 2322 1.221840 CATCTCCACCACTTCCCCG 59.778 63.158 0.00 0.00 0.00 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.540515 CGCACGGTGATAGACAAGAAT 58.459 47.619 13.29 0.00 0.00 2.40
63 64 2.750637 AGAGCGACGATGACCCGT 60.751 61.111 0.00 0.00 46.43 5.28
91 92 1.414181 CATACCTGGCAGATCGACCTT 59.586 52.381 17.94 0.00 0.00 3.50
311 312 1.536072 GGCAGTCGACATCATTCGCTA 60.536 52.381 19.50 0.00 38.95 4.26
588 613 3.565890 CCACTTACCCACCTCCTCTCTTA 60.566 52.174 0.00 0.00 0.00 2.10
617 646 3.302555 TCGCGCTTATATTTACTCACCG 58.697 45.455 5.56 0.00 0.00 4.94
632 661 3.222855 CCTCCTCTCCATCGCGCT 61.223 66.667 5.56 0.00 0.00 5.92
729 761 4.462508 TTGCTCTCCTTGATCTACACAG 57.537 45.455 0.00 0.00 0.00 3.66
734 766 6.070366 CCCATATCATTGCTCTCCTTGATCTA 60.070 42.308 0.00 0.00 31.59 1.98
800 832 1.748879 CGGGCATTGGATGAACCGT 60.749 57.895 13.03 0.00 43.05 4.83
840 872 0.520404 CGTCTTCGGTTCTTCCTCGA 59.480 55.000 0.00 0.00 0.00 4.04
961 993 1.065926 AGATTCGCTGCAAGGATGACA 60.066 47.619 0.00 0.00 0.00 3.58
974 1006 1.606737 GGGGATGCACTCTAGATTCGC 60.607 57.143 0.00 0.00 0.00 4.70
1000 1034 2.158623 TGAAGTGCTTGGTGAAGTCCAT 60.159 45.455 0.00 0.00 37.33 3.41
1068 1102 0.761323 TCTTCACCGTCACCCTCCAA 60.761 55.000 0.00 0.00 0.00 3.53
1087 1121 2.365582 GGTCACCTTGCCGTTCATTAT 58.634 47.619 0.00 0.00 0.00 1.28
1089 1123 0.893727 GGGTCACCTTGCCGTTCATT 60.894 55.000 0.00 0.00 0.00 2.57
1179 1215 1.469335 TTGAGGGTGTCGGGAGTCAC 61.469 60.000 0.00 0.00 45.94 3.67
1220 1256 1.344953 TGTTGACCACCTCAGTGCCT 61.345 55.000 0.00 0.00 43.09 4.75
1225 1261 0.947244 GCACTTGTTGACCACCTCAG 59.053 55.000 0.00 0.00 0.00 3.35
1397 1433 7.278868 AGCATAAACAGAGCATCAACTACTTAC 59.721 37.037 0.00 0.00 37.82 2.34
1464 1500 1.758592 TGGTGAGGTTACCAGCACC 59.241 57.895 28.06 28.06 45.46 5.01
1549 1587 2.995258 GTTTGGTTGCCTGCATGTTATG 59.005 45.455 0.00 0.00 0.00 1.90
1550 1588 2.632028 TGTTTGGTTGCCTGCATGTTAT 59.368 40.909 0.00 0.00 0.00 1.89
1633 1672 1.228644 TGCAGCCTCAAATGCACCT 60.229 52.632 0.00 0.00 46.97 4.00
1674 1715 0.317603 GCTGCATTGCATAGCCTTCG 60.318 55.000 12.53 0.00 38.13 3.79
1721 1763 5.882000 ACATGCTCTTATGCACAACATAGAA 59.118 36.000 0.00 0.00 46.33 2.10
1725 1767 4.943093 TGTACATGCTCTTATGCACAACAT 59.057 37.500 0.00 0.00 46.33 2.71
1739 1781 0.396139 CTGCCCCCATTGTACATGCT 60.396 55.000 0.00 0.00 0.00 3.79
1747 1789 1.454479 CTAGGTGCTGCCCCCATTG 60.454 63.158 0.00 0.00 38.26 2.82
1763 1805 1.077501 GATGTTGGGGCAGCAGCTA 60.078 57.895 0.00 0.00 41.70 3.32
1764 1806 2.362120 GATGTTGGGGCAGCAGCT 60.362 61.111 0.00 0.00 41.70 4.24
1787 1829 6.013842 TGATGCTTCATATACTGTACTCCG 57.986 41.667 0.00 0.00 0.00 4.63
1818 1860 8.282982 TGGGGAGCTCCTATTTAGATATAGTAG 58.717 40.741 31.36 0.00 35.95 2.57
1819 1861 8.060075 GTGGGGAGCTCCTATTTAGATATAGTA 58.940 40.741 31.36 0.00 35.95 1.82
1820 1862 6.898521 GTGGGGAGCTCCTATTTAGATATAGT 59.101 42.308 31.36 0.00 35.95 2.12
1821 1863 6.325286 GGTGGGGAGCTCCTATTTAGATATAG 59.675 46.154 31.36 0.00 35.95 1.31
1822 1864 6.203072 GGTGGGGAGCTCCTATTTAGATATA 58.797 44.000 31.36 2.74 35.95 0.86
1823 1865 5.033522 GGTGGGGAGCTCCTATTTAGATAT 58.966 45.833 31.36 0.00 35.95 1.63
1824 1866 4.140543 TGGTGGGGAGCTCCTATTTAGATA 60.141 45.833 31.36 7.47 35.95 1.98
1825 1867 3.252351 GGTGGGGAGCTCCTATTTAGAT 58.748 50.000 31.36 0.00 35.95 1.98
1826 1868 2.022428 TGGTGGGGAGCTCCTATTTAGA 60.022 50.000 31.36 7.91 35.95 2.10
1827 1869 2.104963 GTGGTGGGGAGCTCCTATTTAG 59.895 54.545 31.36 0.00 35.95 1.85
1828 1870 2.124411 GTGGTGGGGAGCTCCTATTTA 58.876 52.381 31.36 13.35 35.95 1.40
1829 1871 0.919710 GTGGTGGGGAGCTCCTATTT 59.080 55.000 31.36 0.00 35.95 1.40
1830 1872 0.253160 TGTGGTGGGGAGCTCCTATT 60.253 55.000 31.36 0.00 35.95 1.73
1831 1873 0.029681 ATGTGGTGGGGAGCTCCTAT 60.030 55.000 31.36 11.94 35.95 2.57
1832 1874 0.982852 CATGTGGTGGGGAGCTCCTA 60.983 60.000 31.36 18.38 35.95 2.94
1833 1875 2.125912 ATGTGGTGGGGAGCTCCT 59.874 61.111 31.36 6.90 35.95 3.69
1834 1876 1.639635 ATCATGTGGTGGGGAGCTCC 61.640 60.000 25.59 25.59 0.00 4.70
1835 1877 0.257039 AATCATGTGGTGGGGAGCTC 59.743 55.000 4.71 4.71 0.00 4.09
1836 1878 0.706433 AAATCATGTGGTGGGGAGCT 59.294 50.000 0.00 0.00 0.00 4.09
1837 1879 1.106285 GAAATCATGTGGTGGGGAGC 58.894 55.000 0.00 0.00 0.00 4.70
1838 1880 2.240667 AGAGAAATCATGTGGTGGGGAG 59.759 50.000 0.00 0.00 0.00 4.30
1839 1881 2.025981 CAGAGAAATCATGTGGTGGGGA 60.026 50.000 0.00 0.00 0.00 4.81
1840 1882 2.025981 TCAGAGAAATCATGTGGTGGGG 60.026 50.000 0.00 0.00 0.00 4.96
1841 1883 3.276857 CTCAGAGAAATCATGTGGTGGG 58.723 50.000 0.00 0.00 0.00 4.61
1842 1884 2.681848 GCTCAGAGAAATCATGTGGTGG 59.318 50.000 0.00 0.00 0.00 4.61
1843 1885 3.607741 AGCTCAGAGAAATCATGTGGTG 58.392 45.455 0.00 0.00 0.00 4.17
1844 1886 3.518705 AGAGCTCAGAGAAATCATGTGGT 59.481 43.478 17.77 0.00 0.00 4.16
1845 1887 4.121317 GAGAGCTCAGAGAAATCATGTGG 58.879 47.826 17.77 0.00 0.00 4.17
1846 1888 4.567558 GTGAGAGCTCAGAGAAATCATGTG 59.432 45.833 17.77 0.00 40.75 3.21
1847 1889 4.677514 CGTGAGAGCTCAGAGAAATCATGT 60.678 45.833 17.77 0.00 40.75 3.21
1848 1890 3.797796 CGTGAGAGCTCAGAGAAATCATG 59.202 47.826 17.77 10.30 40.75 3.07
1849 1891 3.737663 GCGTGAGAGCTCAGAGAAATCAT 60.738 47.826 17.77 0.00 40.75 2.45
1850 1892 2.416566 GCGTGAGAGCTCAGAGAAATCA 60.417 50.000 17.77 5.96 40.75 2.57
1851 1893 2.192624 GCGTGAGAGCTCAGAGAAATC 58.807 52.381 17.77 3.04 40.75 2.17
1852 1894 1.547820 TGCGTGAGAGCTCAGAGAAAT 59.452 47.619 17.77 0.00 40.75 2.17
1853 1895 0.961753 TGCGTGAGAGCTCAGAGAAA 59.038 50.000 17.77 0.00 40.75 2.52
1854 1896 1.133982 GATGCGTGAGAGCTCAGAGAA 59.866 52.381 17.77 0.00 40.75 2.87
1855 1897 0.737804 GATGCGTGAGAGCTCAGAGA 59.262 55.000 17.77 0.00 40.75 3.10
1856 1898 0.248990 GGATGCGTGAGAGCTCAGAG 60.249 60.000 17.77 5.33 40.75 3.35
1857 1899 0.967380 TGGATGCGTGAGAGCTCAGA 60.967 55.000 17.77 0.00 40.75 3.27
1858 1900 0.805322 GTGGATGCGTGAGAGCTCAG 60.805 60.000 17.77 5.34 40.75 3.35
1859 1901 1.216444 GTGGATGCGTGAGAGCTCA 59.784 57.895 17.77 0.00 38.13 4.26
1860 1902 1.875813 CGTGGATGCGTGAGAGCTC 60.876 63.158 5.27 5.27 38.13 4.09
1861 1903 2.182791 CGTGGATGCGTGAGAGCT 59.817 61.111 0.00 0.00 38.13 4.09
1862 1904 2.125912 ACGTGGATGCGTGAGAGC 60.126 61.111 0.00 0.00 43.99 4.09
1863 1905 1.073216 GTGACGTGGATGCGTGAGAG 61.073 60.000 0.00 0.00 45.79 3.20
1864 1906 1.080772 GTGACGTGGATGCGTGAGA 60.081 57.895 0.00 0.00 45.79 3.27
1865 1907 2.094659 GGTGACGTGGATGCGTGAG 61.095 63.158 0.00 0.00 45.79 3.51
1866 1908 2.048597 GGTGACGTGGATGCGTGA 60.049 61.111 0.00 0.00 45.79 4.35
1867 1909 0.459411 TATGGTGACGTGGATGCGTG 60.459 55.000 0.00 0.00 45.79 5.34
1869 1911 1.581934 ATTATGGTGACGTGGATGCG 58.418 50.000 0.00 0.00 37.94 4.73
1870 1912 5.689383 ATTTATTATGGTGACGTGGATGC 57.311 39.130 0.00 0.00 0.00 3.91
1871 1913 7.702386 TGAAATTTATTATGGTGACGTGGATG 58.298 34.615 0.00 0.00 0.00 3.51
1872 1914 7.468631 GCTGAAATTTATTATGGTGACGTGGAT 60.469 37.037 0.00 0.00 0.00 3.41
1873 1915 6.183360 GCTGAAATTTATTATGGTGACGTGGA 60.183 38.462 0.00 0.00 0.00 4.02
1874 1916 5.971202 GCTGAAATTTATTATGGTGACGTGG 59.029 40.000 0.00 0.00 0.00 4.94
1875 1917 5.971202 GGCTGAAATTTATTATGGTGACGTG 59.029 40.000 0.00 0.00 0.00 4.49
1876 1918 5.220777 CGGCTGAAATTTATTATGGTGACGT 60.221 40.000 0.00 0.00 0.00 4.34
1877 1919 5.204833 CGGCTGAAATTTATTATGGTGACG 58.795 41.667 0.00 0.00 0.00 4.35
1878 1920 6.131544 ACGGCTGAAATTTATTATGGTGAC 57.868 37.500 0.00 0.00 0.00 3.67
1879 1921 6.767524 AACGGCTGAAATTTATTATGGTGA 57.232 33.333 0.00 0.00 0.00 4.02
1880 1922 7.032580 TCAAACGGCTGAAATTTATTATGGTG 58.967 34.615 0.00 0.00 0.00 4.17
1881 1923 7.164230 TCAAACGGCTGAAATTTATTATGGT 57.836 32.000 0.00 0.00 0.00 3.55
1882 1924 8.542132 CAATCAAACGGCTGAAATTTATTATGG 58.458 33.333 0.00 0.00 0.00 2.74
1883 1925 9.299963 TCAATCAAACGGCTGAAATTTATTATG 57.700 29.630 0.00 0.00 0.00 1.90
1884 1926 9.301153 GTCAATCAAACGGCTGAAATTTATTAT 57.699 29.630 0.00 0.00 0.00 1.28
1885 1927 7.757624 GGTCAATCAAACGGCTGAAATTTATTA 59.242 33.333 0.00 0.00 0.00 0.98
1886 1928 6.589907 GGTCAATCAAACGGCTGAAATTTATT 59.410 34.615 0.00 0.00 0.00 1.40
1887 1929 6.099341 GGTCAATCAAACGGCTGAAATTTAT 58.901 36.000 0.00 0.00 0.00 1.40
1888 1930 5.010112 TGGTCAATCAAACGGCTGAAATTTA 59.990 36.000 0.00 0.00 0.00 1.40
1889 1931 4.202202 TGGTCAATCAAACGGCTGAAATTT 60.202 37.500 0.00 0.00 0.00 1.82
1890 1932 3.320541 TGGTCAATCAAACGGCTGAAATT 59.679 39.130 0.00 0.00 0.00 1.82
1891 1933 2.890311 TGGTCAATCAAACGGCTGAAAT 59.110 40.909 0.00 0.00 0.00 2.17
1892 1934 2.034053 GTGGTCAATCAAACGGCTGAAA 59.966 45.455 0.00 0.00 0.00 2.69
1893 1935 1.606668 GTGGTCAATCAAACGGCTGAA 59.393 47.619 0.00 0.00 0.00 3.02
1894 1936 1.234821 GTGGTCAATCAAACGGCTGA 58.765 50.000 0.00 0.00 0.00 4.26
1895 1937 0.110238 CGTGGTCAATCAAACGGCTG 60.110 55.000 0.00 0.00 32.55 4.85
1896 1938 2.244000 CGTGGTCAATCAAACGGCT 58.756 52.632 0.00 0.00 32.55 5.52
1897 1939 4.838959 CGTGGTCAATCAAACGGC 57.161 55.556 0.00 0.00 32.55 5.68
1899 1941 0.237235 CACCCGTGGTCAATCAAACG 59.763 55.000 0.00 0.00 31.02 3.60
1900 1942 1.265905 GTCACCCGTGGTCAATCAAAC 59.734 52.381 0.00 0.00 31.02 2.93
1901 1943 1.142060 AGTCACCCGTGGTCAATCAAA 59.858 47.619 0.00 0.00 31.02 2.69
1902 1944 0.762418 AGTCACCCGTGGTCAATCAA 59.238 50.000 0.00 0.00 31.02 2.57
1903 1945 0.320374 GAGTCACCCGTGGTCAATCA 59.680 55.000 0.00 0.00 31.02 2.57
1904 1946 0.320374 TGAGTCACCCGTGGTCAATC 59.680 55.000 0.00 0.00 31.02 2.67
1905 1947 0.321671 CTGAGTCACCCGTGGTCAAT 59.678 55.000 0.00 0.00 31.02 2.57
1906 1948 0.757561 TCTGAGTCACCCGTGGTCAA 60.758 55.000 0.00 0.00 31.02 3.18
1907 1949 0.541998 ATCTGAGTCACCCGTGGTCA 60.542 55.000 0.00 0.00 31.02 4.02
1908 1950 0.173708 GATCTGAGTCACCCGTGGTC 59.826 60.000 0.00 0.00 31.02 4.02
1909 1951 0.251832 AGATCTGAGTCACCCGTGGT 60.252 55.000 0.00 0.00 35.62 4.16
1910 1952 0.174389 CAGATCTGAGTCACCCGTGG 59.826 60.000 18.34 0.00 0.00 4.94
1911 1953 0.459237 GCAGATCTGAGTCACCCGTG 60.459 60.000 27.04 0.00 0.00 4.94
1912 1954 1.893786 GCAGATCTGAGTCACCCGT 59.106 57.895 27.04 0.00 0.00 5.28
1913 1955 1.226802 CGCAGATCTGAGTCACCCG 60.227 63.158 27.04 13.93 0.00 5.28
1914 1956 1.142748 CCGCAGATCTGAGTCACCC 59.857 63.158 27.04 5.56 0.00 4.61
1915 1957 1.520342 GCCGCAGATCTGAGTCACC 60.520 63.158 27.04 6.31 0.00 4.02
1916 1958 1.875813 CGCCGCAGATCTGAGTCAC 60.876 63.158 27.04 13.10 0.00 3.67
1917 1959 2.491621 CGCCGCAGATCTGAGTCA 59.508 61.111 27.04 0.00 0.00 3.41
1918 1960 2.959071 GCGCCGCAGATCTGAGTC 60.959 66.667 27.04 12.43 0.00 3.36
1919 1961 3.300934 TTGCGCCGCAGATCTGAGT 62.301 57.895 27.04 0.00 40.61 3.41
1920 1962 2.510012 TTGCGCCGCAGATCTGAG 60.510 61.111 27.04 22.65 40.61 3.35
1921 1963 2.510012 CTTGCGCCGCAGATCTGA 60.510 61.111 27.04 0.63 40.61 3.27
1922 1964 4.233635 GCTTGCGCCGCAGATCTG 62.234 66.667 18.84 18.84 40.61 2.90
1923 1965 4.765449 TGCTTGCGCCGCAGATCT 62.765 61.111 13.13 0.00 40.61 2.75
1924 1966 3.117175 AATGCTTGCGCCGCAGATC 62.117 57.895 22.85 6.11 40.61 2.75
1925 1967 3.136123 AATGCTTGCGCCGCAGAT 61.136 55.556 22.85 13.62 40.61 2.90
1926 1968 4.105733 CAATGCTTGCGCCGCAGA 62.106 61.111 22.85 0.24 40.61 4.26
1927 1969 4.105733 TCAATGCTTGCGCCGCAG 62.106 61.111 22.85 8.05 40.61 5.18
1928 1970 4.105733 CTCAATGCTTGCGCCGCA 62.106 61.111 21.25 21.25 42.25 5.69
1932 1974 4.503314 GGGGCTCAATGCTTGCGC 62.503 66.667 0.00 0.00 40.50 6.09
1933 1975 4.183686 CGGGGCTCAATGCTTGCG 62.184 66.667 0.00 0.00 42.39 4.85
1934 1976 4.503314 GCGGGGCTCAATGCTTGC 62.503 66.667 0.00 0.00 42.39 4.01
1935 1977 4.183686 CGCGGGGCTCAATGCTTG 62.184 66.667 0.00 0.00 42.39 4.01
1936 1978 4.722700 ACGCGGGGCTCAATGCTT 62.723 61.111 12.47 0.00 42.39 3.91
1955 1997 4.003788 AACGTGCGGGTCCTGGAG 62.004 66.667 0.00 0.00 0.00 3.86
1956 1998 4.308458 CAACGTGCGGGTCCTGGA 62.308 66.667 0.00 0.00 0.00 3.86
1957 1999 3.818121 TTCAACGTGCGGGTCCTGG 62.818 63.158 0.00 0.00 0.00 4.45
1958 2000 2.280524 TTCAACGTGCGGGTCCTG 60.281 61.111 0.00 0.00 0.00 3.86
1959 2001 2.030562 CTTCAACGTGCGGGTCCT 59.969 61.111 0.00 0.00 0.00 3.85
1960 2002 2.029964 TCTTCAACGTGCGGGTCC 59.970 61.111 0.00 0.00 0.00 4.46
1961 2003 1.282930 GAGTCTTCAACGTGCGGGTC 61.283 60.000 0.00 0.00 0.00 4.46
1962 2004 1.300697 GAGTCTTCAACGTGCGGGT 60.301 57.895 0.00 0.00 0.00 5.28
1963 2005 0.600255 AAGAGTCTTCAACGTGCGGG 60.600 55.000 0.00 0.00 0.00 6.13
1964 2006 0.784778 GAAGAGTCTTCAACGTGCGG 59.215 55.000 24.97 0.00 0.00 5.69
1965 2007 0.784778 GGAAGAGTCTTCAACGTGCG 59.215 55.000 29.36 0.00 0.00 5.34
1966 2008 1.865865 TGGAAGAGTCTTCAACGTGC 58.134 50.000 29.36 14.45 0.00 5.34
1967 2009 2.663602 CGATGGAAGAGTCTTCAACGTG 59.336 50.000 29.36 13.94 0.00 4.49
1968 2010 2.296471 ACGATGGAAGAGTCTTCAACGT 59.704 45.455 29.36 28.70 0.00 3.99
1969 2011 2.917971 GACGATGGAAGAGTCTTCAACG 59.082 50.000 29.36 28.20 32.58 4.10
1970 2012 4.170256 GAGACGATGGAAGAGTCTTCAAC 58.830 47.826 29.36 19.25 44.30 3.18
1971 2013 3.193691 GGAGACGATGGAAGAGTCTTCAA 59.806 47.826 29.36 21.90 44.30 2.69
1972 2014 2.755655 GGAGACGATGGAAGAGTCTTCA 59.244 50.000 29.36 17.96 44.30 3.02
1973 2015 3.020984 AGGAGACGATGGAAGAGTCTTC 58.979 50.000 22.47 22.47 44.30 2.87
1974 2016 3.020984 GAGGAGACGATGGAAGAGTCTT 58.979 50.000 4.68 4.68 44.30 3.01
1975 2017 2.650322 GAGGAGACGATGGAAGAGTCT 58.350 52.381 0.00 0.00 46.61 3.24
1976 2018 1.332375 CGAGGAGACGATGGAAGAGTC 59.668 57.143 0.00 0.00 35.09 3.36
1977 2019 1.384525 CGAGGAGACGATGGAAGAGT 58.615 55.000 0.00 0.00 35.09 3.24
1978 2020 0.030101 GCGAGGAGACGATGGAAGAG 59.970 60.000 0.00 0.00 35.09 2.85
1979 2021 1.384989 GGCGAGGAGACGATGGAAGA 61.385 60.000 0.00 0.00 35.09 2.87
1980 2022 1.066587 GGCGAGGAGACGATGGAAG 59.933 63.158 0.00 0.00 35.09 3.46
1981 2023 1.379977 AGGCGAGGAGACGATGGAA 60.380 57.895 0.00 0.00 35.09 3.53
1982 2024 1.824329 GAGGCGAGGAGACGATGGA 60.824 63.158 0.00 0.00 35.09 3.41
1983 2025 2.725008 GAGGCGAGGAGACGATGG 59.275 66.667 0.00 0.00 35.09 3.51
1984 2026 1.791103 GAGGAGGCGAGGAGACGATG 61.791 65.000 0.00 0.00 35.09 3.84
1985 2027 1.527380 GAGGAGGCGAGGAGACGAT 60.527 63.158 0.00 0.00 35.09 3.73
1986 2028 2.124653 GAGGAGGCGAGGAGACGA 60.125 66.667 0.00 0.00 35.09 4.20
1987 2029 1.595993 TTTGAGGAGGCGAGGAGACG 61.596 60.000 0.00 0.00 0.00 4.18
1988 2030 0.608640 TTTTGAGGAGGCGAGGAGAC 59.391 55.000 0.00 0.00 0.00 3.36
1989 2031 0.608640 GTTTTGAGGAGGCGAGGAGA 59.391 55.000 0.00 0.00 0.00 3.71
1990 2032 0.737715 CGTTTTGAGGAGGCGAGGAG 60.738 60.000 0.00 0.00 0.00 3.69
1991 2033 1.292223 CGTTTTGAGGAGGCGAGGA 59.708 57.895 0.00 0.00 0.00 3.71
1992 2034 2.391389 GCGTTTTGAGGAGGCGAGG 61.391 63.158 0.00 0.00 0.00 4.63
1993 2035 3.169198 GCGTTTTGAGGAGGCGAG 58.831 61.111 0.00 0.00 0.00 5.03
1996 2038 3.353836 TGCGCGTTTTGAGGAGGC 61.354 61.111 8.43 0.00 0.00 4.70
1997 2039 2.556287 GTGCGCGTTTTGAGGAGG 59.444 61.111 8.43 0.00 0.00 4.30
1998 2040 0.669318 TAGGTGCGCGTTTTGAGGAG 60.669 55.000 8.43 0.00 0.00 3.69
1999 2041 0.947180 GTAGGTGCGCGTTTTGAGGA 60.947 55.000 8.43 0.00 0.00 3.71
2000 2042 1.495951 GTAGGTGCGCGTTTTGAGG 59.504 57.895 8.43 0.00 0.00 3.86
2001 2043 1.495951 GGTAGGTGCGCGTTTTGAG 59.504 57.895 8.43 0.00 0.00 3.02
2002 2044 1.962306 GGGTAGGTGCGCGTTTTGA 60.962 57.895 8.43 0.00 0.00 2.69
2003 2045 1.512156 AAGGGTAGGTGCGCGTTTTG 61.512 55.000 8.43 0.00 0.00 2.44
2004 2046 1.228033 AAGGGTAGGTGCGCGTTTT 60.228 52.632 8.43 0.00 0.00 2.43
2005 2047 1.670083 GAAGGGTAGGTGCGCGTTT 60.670 57.895 8.43 0.00 0.00 3.60
2006 2048 2.047560 GAAGGGTAGGTGCGCGTT 60.048 61.111 8.43 0.00 0.00 4.84
2007 2049 4.078516 GGAAGGGTAGGTGCGCGT 62.079 66.667 8.43 0.00 0.00 6.01
2008 2050 4.832608 GGGAAGGGTAGGTGCGCG 62.833 72.222 0.00 0.00 0.00 6.86
2009 2051 3.387225 GAGGGAAGGGTAGGTGCGC 62.387 68.421 0.00 0.00 0.00 6.09
2010 2052 1.265454 AAGAGGGAAGGGTAGGTGCG 61.265 60.000 0.00 0.00 0.00 5.34
2011 2053 0.542333 GAAGAGGGAAGGGTAGGTGC 59.458 60.000 0.00 0.00 0.00 5.01
2012 2054 1.834263 CTGAAGAGGGAAGGGTAGGTG 59.166 57.143 0.00 0.00 0.00 4.00
2013 2055 1.722851 TCTGAAGAGGGAAGGGTAGGT 59.277 52.381 0.00 0.00 0.00 3.08
2014 2056 2.552093 TCTGAAGAGGGAAGGGTAGG 57.448 55.000 0.00 0.00 0.00 3.18
2015 2057 3.389656 GGAATCTGAAGAGGGAAGGGTAG 59.610 52.174 0.00 0.00 0.00 3.18
2016 2058 3.385115 GGAATCTGAAGAGGGAAGGGTA 58.615 50.000 0.00 0.00 0.00 3.69
2017 2059 2.200955 GGAATCTGAAGAGGGAAGGGT 58.799 52.381 0.00 0.00 0.00 4.34
2018 2060 1.492599 GGGAATCTGAAGAGGGAAGGG 59.507 57.143 0.00 0.00 0.00 3.95
2019 2061 1.492599 GGGGAATCTGAAGAGGGAAGG 59.507 57.143 0.00 0.00 0.00 3.46
2020 2062 2.200081 TGGGGAATCTGAAGAGGGAAG 58.800 52.381 0.00 0.00 0.00 3.46
2021 2063 2.359376 TGGGGAATCTGAAGAGGGAA 57.641 50.000 0.00 0.00 0.00 3.97
2022 2064 2.359376 TTGGGGAATCTGAAGAGGGA 57.641 50.000 0.00 0.00 0.00 4.20
2023 2065 3.677156 AATTGGGGAATCTGAAGAGGG 57.323 47.619 0.00 0.00 0.00 4.30
2024 2066 5.010415 GCATAAATTGGGGAATCTGAAGAGG 59.990 44.000 0.00 0.00 0.00 3.69
2025 2067 5.278169 CGCATAAATTGGGGAATCTGAAGAG 60.278 44.000 0.00 0.00 34.74 2.85
2026 2068 4.580167 CGCATAAATTGGGGAATCTGAAGA 59.420 41.667 0.00 0.00 34.74 2.87
2027 2069 4.339247 ACGCATAAATTGGGGAATCTGAAG 59.661 41.667 0.00 0.00 42.37 3.02
2028 2070 4.277476 ACGCATAAATTGGGGAATCTGAA 58.723 39.130 0.00 0.00 42.37 3.02
2029 2071 3.897239 ACGCATAAATTGGGGAATCTGA 58.103 40.909 0.00 0.00 42.37 3.27
2030 2072 4.339247 AGAACGCATAAATTGGGGAATCTG 59.661 41.667 0.00 0.00 42.37 2.90
2031 2073 4.536765 AGAACGCATAAATTGGGGAATCT 58.463 39.130 0.00 0.00 42.37 2.40
2032 2074 4.261614 GGAGAACGCATAAATTGGGGAATC 60.262 45.833 0.00 0.00 42.37 2.52
2033 2075 3.636764 GGAGAACGCATAAATTGGGGAAT 59.363 43.478 0.00 0.00 42.37 3.01
2034 2076 3.020984 GGAGAACGCATAAATTGGGGAA 58.979 45.455 0.00 0.00 42.37 3.97
2035 2077 2.241176 AGGAGAACGCATAAATTGGGGA 59.759 45.455 0.00 0.00 42.37 4.81
2036 2078 2.618709 GAGGAGAACGCATAAATTGGGG 59.381 50.000 0.00 0.00 42.37 4.96
2037 2079 3.545703 AGAGGAGAACGCATAAATTGGG 58.454 45.455 0.00 0.00 43.63 4.12
2038 2080 4.878397 AGAAGAGGAGAACGCATAAATTGG 59.122 41.667 0.00 0.00 0.00 3.16
2039 2081 5.007136 GGAGAAGAGGAGAACGCATAAATTG 59.993 44.000 0.00 0.00 0.00 2.32
2040 2082 5.104735 AGGAGAAGAGGAGAACGCATAAATT 60.105 40.000 0.00 0.00 0.00 1.82
2041 2083 4.407296 AGGAGAAGAGGAGAACGCATAAAT 59.593 41.667 0.00 0.00 0.00 1.40
2042 2084 3.769844 AGGAGAAGAGGAGAACGCATAAA 59.230 43.478 0.00 0.00 0.00 1.40
2043 2085 3.366396 AGGAGAAGAGGAGAACGCATAA 58.634 45.455 0.00 0.00 0.00 1.90
2044 2086 3.019799 AGGAGAAGAGGAGAACGCATA 57.980 47.619 0.00 0.00 0.00 3.14
2045 2087 1.859302 AGGAGAAGAGGAGAACGCAT 58.141 50.000 0.00 0.00 0.00 4.73
2046 2088 1.546476 GAAGGAGAAGAGGAGAACGCA 59.454 52.381 0.00 0.00 0.00 5.24
2047 2089 1.134936 GGAAGGAGAAGAGGAGAACGC 60.135 57.143 0.00 0.00 0.00 4.84
2048 2090 2.171840 TGGAAGGAGAAGAGGAGAACG 58.828 52.381 0.00 0.00 0.00 3.95
2049 2091 3.133901 GGATGGAAGGAGAAGAGGAGAAC 59.866 52.174 0.00 0.00 0.00 3.01
2050 2092 3.379452 GGATGGAAGGAGAAGAGGAGAA 58.621 50.000 0.00 0.00 0.00 2.87
2051 2093 2.359781 GGGATGGAAGGAGAAGAGGAGA 60.360 54.545 0.00 0.00 0.00 3.71
2052 2094 2.046292 GGGATGGAAGGAGAAGAGGAG 58.954 57.143 0.00 0.00 0.00 3.69
2053 2095 1.653918 AGGGATGGAAGGAGAAGAGGA 59.346 52.381 0.00 0.00 0.00 3.71
2054 2096 2.046292 GAGGGATGGAAGGAGAAGAGG 58.954 57.143 0.00 0.00 0.00 3.69
2055 2097 2.046292 GGAGGGATGGAAGGAGAAGAG 58.954 57.143 0.00 0.00 0.00 2.85
2056 2098 1.344496 GGGAGGGATGGAAGGAGAAGA 60.344 57.143 0.00 0.00 0.00 2.87
2057 2099 1.135960 GGGAGGGATGGAAGGAGAAG 58.864 60.000 0.00 0.00 0.00 2.85
2058 2100 0.725133 AGGGAGGGATGGAAGGAGAA 59.275 55.000 0.00 0.00 0.00 2.87
2059 2101 0.030705 CAGGGAGGGATGGAAGGAGA 60.031 60.000 0.00 0.00 0.00 3.71
2060 2102 1.704007 GCAGGGAGGGATGGAAGGAG 61.704 65.000 0.00 0.00 0.00 3.69
2061 2103 1.694169 GCAGGGAGGGATGGAAGGA 60.694 63.158 0.00 0.00 0.00 3.36
2062 2104 2.761465 GGCAGGGAGGGATGGAAGG 61.761 68.421 0.00 0.00 0.00 3.46
2063 2105 1.574526 TTGGCAGGGAGGGATGGAAG 61.575 60.000 0.00 0.00 0.00 3.46
2064 2106 1.543642 TTGGCAGGGAGGGATGGAA 60.544 57.895 0.00 0.00 0.00 3.53
2065 2107 2.127065 TTGGCAGGGAGGGATGGA 59.873 61.111 0.00 0.00 0.00 3.41
2066 2108 2.276740 GTTGGCAGGGAGGGATGG 59.723 66.667 0.00 0.00 0.00 3.51
2067 2109 2.124570 CGTTGGCAGGGAGGGATG 60.125 66.667 0.00 0.00 0.00 3.51
2068 2110 1.789576 AAACGTTGGCAGGGAGGGAT 61.790 55.000 0.00 0.00 0.00 3.85
2069 2111 2.406002 GAAACGTTGGCAGGGAGGGA 62.406 60.000 0.00 0.00 0.00 4.20
2070 2112 1.971695 GAAACGTTGGCAGGGAGGG 60.972 63.158 0.00 0.00 0.00 4.30
2071 2113 0.821711 TTGAAACGTTGGCAGGGAGG 60.822 55.000 0.00 0.00 0.00 4.30
2072 2114 1.200020 GATTGAAACGTTGGCAGGGAG 59.800 52.381 0.00 0.00 0.00 4.30
2073 2115 1.202879 AGATTGAAACGTTGGCAGGGA 60.203 47.619 0.00 0.00 0.00 4.20
2074 2116 1.200020 GAGATTGAAACGTTGGCAGGG 59.800 52.381 0.00 0.00 0.00 4.45
2075 2117 1.200020 GGAGATTGAAACGTTGGCAGG 59.800 52.381 0.00 0.00 0.00 4.85
2076 2118 1.200020 GGGAGATTGAAACGTTGGCAG 59.800 52.381 0.00 0.00 0.00 4.85
2077 2119 1.243902 GGGAGATTGAAACGTTGGCA 58.756 50.000 0.00 0.00 0.00 4.92
2078 2120 0.168128 CGGGAGATTGAAACGTTGGC 59.832 55.000 0.00 0.00 0.00 4.52
2079 2121 1.803334 TCGGGAGATTGAAACGTTGG 58.197 50.000 0.00 0.00 0.00 3.77
2091 2133 0.470080 GTGATGGGGAGATCGGGAGA 60.470 60.000 0.00 0.00 46.90 3.71
2092 2134 1.476007 GGTGATGGGGAGATCGGGAG 61.476 65.000 0.00 0.00 0.00 4.30
2093 2135 1.459539 GGTGATGGGGAGATCGGGA 60.460 63.158 0.00 0.00 0.00 5.14
2094 2136 1.766059 TGGTGATGGGGAGATCGGG 60.766 63.158 0.00 0.00 0.00 5.14
2095 2137 1.337384 TGTGGTGATGGGGAGATCGG 61.337 60.000 0.00 0.00 0.00 4.18
2096 2138 0.541392 TTGTGGTGATGGGGAGATCG 59.459 55.000 0.00 0.00 0.00 3.69
2097 2139 2.290896 TGTTTGTGGTGATGGGGAGATC 60.291 50.000 0.00 0.00 0.00 2.75
2098 2140 1.710244 TGTTTGTGGTGATGGGGAGAT 59.290 47.619 0.00 0.00 0.00 2.75
2099 2141 1.144691 TGTTTGTGGTGATGGGGAGA 58.855 50.000 0.00 0.00 0.00 3.71
2100 2142 1.247567 GTGTTTGTGGTGATGGGGAG 58.752 55.000 0.00 0.00 0.00 4.30
2101 2143 0.553333 TGTGTTTGTGGTGATGGGGA 59.447 50.000 0.00 0.00 0.00 4.81
2102 2144 0.673437 GTGTGTTTGTGGTGATGGGG 59.327 55.000 0.00 0.00 0.00 4.96
2103 2145 1.397672 TGTGTGTTTGTGGTGATGGG 58.602 50.000 0.00 0.00 0.00 4.00
2104 2146 2.288334 CCATGTGTGTTTGTGGTGATGG 60.288 50.000 0.00 0.00 0.00 3.51
2105 2147 2.622470 TCCATGTGTGTTTGTGGTGATG 59.378 45.455 0.00 0.00 33.47 3.07
2106 2148 2.942804 TCCATGTGTGTTTGTGGTGAT 58.057 42.857 0.00 0.00 33.47 3.06
2107 2149 2.425312 GTTCCATGTGTGTTTGTGGTGA 59.575 45.455 0.00 0.00 33.47 4.02
2108 2150 2.794282 CGTTCCATGTGTGTTTGTGGTG 60.794 50.000 0.00 0.00 33.47 4.17
2109 2151 1.403679 CGTTCCATGTGTGTTTGTGGT 59.596 47.619 0.00 0.00 33.47 4.16
2110 2152 1.268999 CCGTTCCATGTGTGTTTGTGG 60.269 52.381 0.00 0.00 0.00 4.17
2111 2153 1.673400 TCCGTTCCATGTGTGTTTGTG 59.327 47.619 0.00 0.00 0.00 3.33
2112 2154 2.045561 TCCGTTCCATGTGTGTTTGT 57.954 45.000 0.00 0.00 0.00 2.83
2113 2155 2.351641 CCATCCGTTCCATGTGTGTTTG 60.352 50.000 0.00 0.00 0.00 2.93
2114 2156 1.885887 CCATCCGTTCCATGTGTGTTT 59.114 47.619 0.00 0.00 0.00 2.83
2115 2157 1.533625 CCATCCGTTCCATGTGTGTT 58.466 50.000 0.00 0.00 0.00 3.32
2116 2158 0.960364 GCCATCCGTTCCATGTGTGT 60.960 55.000 0.00 0.00 0.00 3.72
2117 2159 1.802636 GCCATCCGTTCCATGTGTG 59.197 57.895 0.00 0.00 0.00 3.82
2118 2160 1.745115 CGCCATCCGTTCCATGTGT 60.745 57.895 0.00 0.00 0.00 3.72
2119 2161 2.472059 CCGCCATCCGTTCCATGTG 61.472 63.158 0.00 0.00 34.38 3.21
2120 2162 2.124736 CCGCCATCCGTTCCATGT 60.125 61.111 0.00 0.00 34.38 3.21
2121 2163 3.585990 GCCGCCATCCGTTCCATG 61.586 66.667 0.00 0.00 34.38 3.66
2122 2164 3.420206 ATGCCGCCATCCGTTCCAT 62.420 57.895 0.00 0.00 34.38 3.41
2123 2165 4.108299 ATGCCGCCATCCGTTCCA 62.108 61.111 0.00 0.00 34.38 3.53
2124 2166 3.585990 CATGCCGCCATCCGTTCC 61.586 66.667 0.00 0.00 34.38 3.62
2125 2167 4.256090 GCATGCCGCCATCCGTTC 62.256 66.667 6.36 0.00 34.38 3.95
2127 2169 4.881440 ATGCATGCCGCCATCCGT 62.881 61.111 16.68 0.00 41.33 4.69
2128 2170 4.034258 GATGCATGCCGCCATCCG 62.034 66.667 16.68 0.00 41.33 4.18
2129 2171 3.677648 GGATGCATGCCGCCATCC 61.678 66.667 16.68 16.56 41.33 3.51
2130 2172 2.209064 GATGGATGCATGCCGCCATC 62.209 60.000 34.20 34.20 46.84 3.51
2131 2173 2.203582 ATGGATGCATGCCGCCAT 60.204 55.556 26.81 26.81 41.33 4.40
2132 2174 2.908428 GATGGATGCATGCCGCCA 60.908 61.111 25.13 25.13 41.33 5.69
2133 2175 2.138656 GAAGATGGATGCATGCCGCC 62.139 60.000 16.68 16.65 41.33 6.13
2134 2176 1.285023 GAAGATGGATGCATGCCGC 59.715 57.895 16.68 6.80 42.89 6.53
2135 2177 1.199327 GATGAAGATGGATGCATGCCG 59.801 52.381 16.68 0.00 0.00 5.69
2136 2178 2.030185 GTGATGAAGATGGATGCATGCC 60.030 50.000 16.68 11.49 0.00 4.40
2137 2179 2.030185 GGTGATGAAGATGGATGCATGC 60.030 50.000 11.82 11.82 0.00 4.06
2138 2180 2.557056 GGGTGATGAAGATGGATGCATG 59.443 50.000 2.46 0.00 0.00 4.06
2139 2181 2.176148 TGGGTGATGAAGATGGATGCAT 59.824 45.455 0.00 0.00 0.00 3.96
2140 2182 1.565288 TGGGTGATGAAGATGGATGCA 59.435 47.619 0.00 0.00 0.00 3.96
2141 2183 2.353357 TGGGTGATGAAGATGGATGC 57.647 50.000 0.00 0.00 0.00 3.91
2142 2184 3.181437 TGGATGGGTGATGAAGATGGATG 60.181 47.826 0.00 0.00 0.00 3.51
2143 2185 3.058341 TGGATGGGTGATGAAGATGGAT 58.942 45.455 0.00 0.00 0.00 3.41
2144 2186 2.440627 CTGGATGGGTGATGAAGATGGA 59.559 50.000 0.00 0.00 0.00 3.41
2145 2187 2.488528 CCTGGATGGGTGATGAAGATGG 60.489 54.545 0.00 0.00 0.00 3.51
2146 2188 2.860009 CCTGGATGGGTGATGAAGATG 58.140 52.381 0.00 0.00 0.00 2.90
2158 2200 2.634453 GGGCAATAAAATCCCTGGATGG 59.366 50.000 0.00 0.00 37.08 3.51
2159 2201 3.307506 TGGGCAATAAAATCCCTGGATG 58.692 45.455 0.00 0.00 40.69 3.51
2160 2202 3.704545 TGGGCAATAAAATCCCTGGAT 57.295 42.857 0.00 0.00 40.69 3.41
2161 2203 3.207321 AGATGGGCAATAAAATCCCTGGA 59.793 43.478 0.00 0.00 40.69 3.86
2162 2204 3.575687 GAGATGGGCAATAAAATCCCTGG 59.424 47.826 0.00 0.00 40.69 4.45
2163 2205 3.575687 GGAGATGGGCAATAAAATCCCTG 59.424 47.826 0.00 0.00 40.69 4.45
2164 2206 3.468625 AGGAGATGGGCAATAAAATCCCT 59.531 43.478 0.00 0.00 40.69 4.20
2165 2207 3.849527 AGGAGATGGGCAATAAAATCCC 58.150 45.455 0.00 0.00 40.47 3.85
2166 2208 5.143369 AGAAGGAGATGGGCAATAAAATCC 58.857 41.667 0.00 0.00 0.00 3.01
2167 2209 7.001073 ACTAGAAGGAGATGGGCAATAAAATC 58.999 38.462 0.00 0.00 0.00 2.17
2168 2210 6.774656 CACTAGAAGGAGATGGGCAATAAAAT 59.225 38.462 0.00 0.00 0.00 1.82
2169 2211 6.069673 TCACTAGAAGGAGATGGGCAATAAAA 60.070 38.462 0.00 0.00 0.00 1.52
2170 2212 5.428457 TCACTAGAAGGAGATGGGCAATAAA 59.572 40.000 0.00 0.00 0.00 1.40
2171 2213 4.968719 TCACTAGAAGGAGATGGGCAATAA 59.031 41.667 0.00 0.00 0.00 1.40
2172 2214 4.556697 TCACTAGAAGGAGATGGGCAATA 58.443 43.478 0.00 0.00 0.00 1.90
2173 2215 3.387962 TCACTAGAAGGAGATGGGCAAT 58.612 45.455 0.00 0.00 0.00 3.56
2174 2216 2.832838 TCACTAGAAGGAGATGGGCAA 58.167 47.619 0.00 0.00 0.00 4.52
2175 2217 2.550277 TCACTAGAAGGAGATGGGCA 57.450 50.000 0.00 0.00 0.00 5.36
2176 2218 3.399440 CATCACTAGAAGGAGATGGGC 57.601 52.381 0.00 0.00 35.42 5.36
2179 2221 4.898265 TCTTCCCATCACTAGAAGGAGATG 59.102 45.833 0.00 2.27 38.03 2.90
2180 2222 5.149584 TCTTCCCATCACTAGAAGGAGAT 57.850 43.478 0.00 0.00 38.03 2.75
2181 2223 4.609866 TCTTCCCATCACTAGAAGGAGA 57.390 45.455 0.00 0.00 38.03 3.71
2182 2224 5.275067 CTTCTTCCCATCACTAGAAGGAG 57.725 47.826 0.00 0.00 39.77 3.69
2185 2227 3.432890 GCCCTTCTTCCCATCACTAGAAG 60.433 52.174 0.00 0.00 41.94 2.85
2186 2228 2.505819 GCCCTTCTTCCCATCACTAGAA 59.494 50.000 0.00 0.00 0.00 2.10
2187 2229 2.119495 GCCCTTCTTCCCATCACTAGA 58.881 52.381 0.00 0.00 0.00 2.43
2188 2230 1.202580 CGCCCTTCTTCCCATCACTAG 60.203 57.143 0.00 0.00 0.00 2.57
2189 2231 0.830648 CGCCCTTCTTCCCATCACTA 59.169 55.000 0.00 0.00 0.00 2.74
2190 2232 1.604378 CGCCCTTCTTCCCATCACT 59.396 57.895 0.00 0.00 0.00 3.41
2191 2233 1.452108 CCGCCCTTCTTCCCATCAC 60.452 63.158 0.00 0.00 0.00 3.06
2192 2234 2.998097 CCGCCCTTCTTCCCATCA 59.002 61.111 0.00 0.00 0.00 3.07
2193 2235 2.517166 GCCGCCCTTCTTCCCATC 60.517 66.667 0.00 0.00 0.00 3.51
2194 2236 3.017581 AGCCGCCCTTCTTCCCAT 61.018 61.111 0.00 0.00 0.00 4.00
2195 2237 4.033776 CAGCCGCCCTTCTTCCCA 62.034 66.667 0.00 0.00 0.00 4.37
2197 2239 4.722700 TGCAGCCGCCCTTCTTCC 62.723 66.667 0.00 0.00 37.32 3.46
2198 2240 2.439156 ATGCAGCCGCCCTTCTTC 60.439 61.111 0.00 0.00 37.32 2.87
2199 2241 2.439156 GATGCAGCCGCCCTTCTT 60.439 61.111 0.00 0.00 37.32 2.52
2200 2242 2.883267 GAAGATGCAGCCGCCCTTCT 62.883 60.000 13.67 1.40 40.64 2.85
2201 2243 2.439156 AAGATGCAGCCGCCCTTC 60.439 61.111 0.00 0.00 37.32 3.46
2202 2244 2.439156 GAAGATGCAGCCGCCCTT 60.439 61.111 0.00 0.00 37.32 3.95
2203 2245 2.883267 GAAGAAGATGCAGCCGCCCT 62.883 60.000 0.00 0.00 37.32 5.19
2204 2246 2.439156 AAGAAGATGCAGCCGCCC 60.439 61.111 0.00 0.00 37.32 6.13
2205 2247 1.028868 AAGAAGAAGATGCAGCCGCC 61.029 55.000 0.00 0.00 37.32 6.13
2206 2248 0.376502 GAAGAAGAAGATGCAGCCGC 59.623 55.000 0.00 0.00 39.24 6.53
2207 2249 1.012841 GGAAGAAGAAGATGCAGCCG 58.987 55.000 0.00 0.00 0.00 5.52
2208 2250 1.064832 AGGGAAGAAGAAGATGCAGCC 60.065 52.381 0.00 0.00 0.00 4.85
2209 2251 2.416680 AGGGAAGAAGAAGATGCAGC 57.583 50.000 0.00 0.00 0.00 5.25
2210 2252 3.465871 GCTAGGGAAGAAGAAGATGCAG 58.534 50.000 0.00 0.00 0.00 4.41
2211 2253 2.159043 CGCTAGGGAAGAAGAAGATGCA 60.159 50.000 0.00 0.00 0.00 3.96
2212 2254 2.478831 CGCTAGGGAAGAAGAAGATGC 58.521 52.381 0.00 0.00 0.00 3.91
2213 2255 2.478831 GCGCTAGGGAAGAAGAAGATG 58.521 52.381 11.61 0.00 0.00 2.90
2214 2256 1.414550 GGCGCTAGGGAAGAAGAAGAT 59.585 52.381 11.61 0.00 0.00 2.40
2215 2257 0.824759 GGCGCTAGGGAAGAAGAAGA 59.175 55.000 11.61 0.00 0.00 2.87
2216 2258 0.528684 CGGCGCTAGGGAAGAAGAAG 60.529 60.000 11.61 0.00 0.00 2.85
2217 2259 1.515954 CGGCGCTAGGGAAGAAGAA 59.484 57.895 11.61 0.00 0.00 2.52
2218 2260 2.423898 CCGGCGCTAGGGAAGAAGA 61.424 63.158 11.61 0.00 0.00 2.87
2219 2261 2.107141 CCGGCGCTAGGGAAGAAG 59.893 66.667 11.61 0.00 0.00 2.85
2220 2262 4.157120 GCCGGCGCTAGGGAAGAA 62.157 66.667 12.58 0.00 0.00 2.52
2221 2263 3.726558 TAGCCGGCGCTAGGGAAGA 62.727 63.158 23.20 0.00 46.08 2.87
2222 2264 3.224324 TAGCCGGCGCTAGGGAAG 61.224 66.667 23.20 3.04 46.08 3.46
2228 2270 3.217017 CTGAGGTAGCCGGCGCTA 61.217 66.667 23.20 5.95 46.08 4.26
2237 2279 1.148310 CGTGGTGTTTGCTGAGGTAG 58.852 55.000 0.00 0.00 0.00 3.18
2238 2280 0.250124 CCGTGGTGTTTGCTGAGGTA 60.250 55.000 0.00 0.00 0.00 3.08
2239 2281 1.525995 CCGTGGTGTTTGCTGAGGT 60.526 57.895 0.00 0.00 0.00 3.85
2240 2282 0.606401 ATCCGTGGTGTTTGCTGAGG 60.606 55.000 0.00 0.00 0.00 3.86
2241 2283 0.518636 CATCCGTGGTGTTTGCTGAG 59.481 55.000 0.00 0.00 0.00 3.35
2242 2284 0.888736 CCATCCGTGGTGTTTGCTGA 60.889 55.000 0.00 0.00 40.83 4.26
2243 2285 1.580942 CCATCCGTGGTGTTTGCTG 59.419 57.895 0.00 0.00 40.83 4.41
2244 2286 4.079446 CCATCCGTGGTGTTTGCT 57.921 55.556 0.00 0.00 40.83 3.91
2259 2301 1.685224 GGAAGTGGTGGAGATGCCA 59.315 57.895 0.00 0.00 46.96 4.92
2260 2302 1.077429 GGGAAGTGGTGGAGATGCC 60.077 63.158 0.00 0.00 37.10 4.40
2261 2303 1.077429 GGGGAAGTGGTGGAGATGC 60.077 63.158 0.00 0.00 0.00 3.91
2262 2304 1.221840 CGGGGAAGTGGTGGAGATG 59.778 63.158 0.00 0.00 0.00 2.90
2263 2305 3.727387 CGGGGAAGTGGTGGAGAT 58.273 61.111 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.