Multiple sequence alignment - TraesCS3B01G456000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G456000 chr3B 100.000 4518 0 0 1 4518 697569114 697564597 0.000000e+00 8344.0
1 TraesCS3B01G456000 chr3B 78.401 1676 253 59 1865 3519 675579931 675581518 0.000000e+00 989.0
2 TraesCS3B01G456000 chr3B 94.762 210 10 1 4309 4517 195281997 195281788 4.360000e-85 326.0
3 TraesCS3B01G456000 chr3B 87.097 93 9 2 240 329 684748825 684748733 8.000000e-18 102.0
4 TraesCS3B01G456000 chr3D 91.685 3211 158 36 554 3736 527482034 527485163 0.000000e+00 4349.0
5 TraesCS3B01G456000 chr3D 87.809 2264 204 38 1835 4057 527506846 527509078 0.000000e+00 2586.0
6 TraesCS3B01G456000 chr3D 78.558 2178 352 79 1388 3519 512979370 512981478 0.000000e+00 1328.0
7 TraesCS3B01G456000 chr3D 86.358 799 91 8 1040 1834 527505959 527506743 0.000000e+00 856.0
8 TraesCS3B01G456000 chr3D 94.762 210 11 0 4309 4518 260905388 260905597 1.210000e-85 327.0
9 TraesCS3B01G456000 chr3D 94.762 210 11 0 4309 4518 446095681 446095472 1.210000e-85 327.0
10 TraesCS3B01G456000 chr3D 88.489 278 21 6 802 1068 527505671 527505948 4.360000e-85 326.0
11 TraesCS3B01G456000 chr3D 83.333 312 33 6 1 309 527481388 527481683 2.070000e-68 270.0
12 TraesCS3B01G456000 chr3D 86.842 190 24 1 4082 4270 517110724 517110535 1.270000e-50 211.0
13 TraesCS3B01G456000 chr3D 88.750 80 7 1 3728 3805 527486676 527486755 3.720000e-16 97.1
14 TraesCS3B01G456000 chr3A 78.389 1490 258 51 1385 2846 648535513 648536966 0.000000e+00 909.0
15 TraesCS3B01G456000 chr3A 78.795 1278 217 43 1385 2643 648549240 648550482 0.000000e+00 809.0
16 TraesCS3B01G456000 chr3A 77.205 873 158 30 1385 2240 648532253 648533101 5.290000e-129 472.0
17 TraesCS3B01G456000 chr3A 78.675 483 75 19 2659 3131 648550623 648551087 3.420000e-76 296.0
18 TraesCS3B01G456000 chr3A 89.535 86 8 1 240 324 655898811 655898896 1.720000e-19 108.0
19 TraesCS3B01G456000 chr5D 95.673 208 9 0 4311 4518 205108029 205107822 7.240000e-88 335.0
20 TraesCS3B01G456000 chr5D 94.811 212 9 2 4309 4518 130421623 130421834 3.370000e-86 329.0
21 TraesCS3B01G456000 chr5D 84.656 189 28 1 4084 4271 209199715 209199903 2.150000e-43 187.0
22 TraesCS3B01G456000 chr5D 84.831 178 16 6 3887 4057 503309250 503309077 7.770000e-38 169.0
23 TraesCS3B01G456000 chr4D 94.762 210 11 0 4309 4518 47779113 47778904 1.210000e-85 327.0
24 TraesCS3B01G456000 chr4D 94.762 210 11 0 4309 4518 326008998 326009207 1.210000e-85 327.0
25 TraesCS3B01G456000 chr4D 94.762 210 11 0 4309 4518 360156669 360156460 1.210000e-85 327.0
26 TraesCS3B01G456000 chr2B 94.787 211 10 1 4309 4518 136643995 136644205 1.210000e-85 327.0
27 TraesCS3B01G456000 chr2B 87.582 153 19 0 4082 4234 232516613 232516765 1.290000e-40 178.0
28 TraesCS3B01G456000 chr2B 78.125 128 21 7 113 237 778002113 778001990 1.740000e-09 75.0
29 TraesCS3B01G456000 chr1B 90.164 183 16 2 4090 4271 142453785 142453604 2.100000e-58 237.0
30 TraesCS3B01G456000 chr2D 90.854 164 15 0 4082 4245 375839405 375839568 2.120000e-53 220.0
31 TraesCS3B01G456000 chr2D 91.935 62 5 0 4184 4245 479934828 479934889 2.240000e-13 87.9
32 TraesCS3B01G456000 chr1D 87.709 179 22 0 4082 4260 1378099 1378277 4.580000e-50 209.0
33 TraesCS3B01G456000 chr1D 84.270 178 17 6 3887 4057 446738462 446738289 3.620000e-36 163.0
34 TraesCS3B01G456000 chr6B 87.363 182 19 4 4092 4271 690863918 690864097 5.920000e-49 206.0
35 TraesCS3B01G456000 chr5A 87.273 165 20 1 4082 4245 110376331 110376167 2.150000e-43 187.0
36 TraesCS3B01G456000 chr5A 84.270 178 17 5 3887 4057 85548326 85548153 3.620000e-36 163.0
37 TraesCS3B01G456000 chr5A 86.207 87 10 2 240 324 440941740 440941826 4.810000e-15 93.5
38 TraesCS3B01G456000 chr6A 84.021 194 30 1 4079 4271 298275919 298276112 7.720000e-43 185.0
39 TraesCS3B01G456000 chrUn 84.066 182 16 7 3877 4051 387440910 387441085 3.620000e-36 163.0
40 TraesCS3B01G456000 chrUn 84.066 182 16 7 3877 4051 461210343 461210518 3.620000e-36 163.0
41 TraesCS3B01G456000 chrUn 78.125 128 21 7 113 237 316212481 316212358 1.740000e-09 75.0
42 TraesCS3B01G456000 chr7B 84.270 178 17 6 3887 4057 137682238 137682065 3.620000e-36 163.0
43 TraesCS3B01G456000 chr7B 84.270 178 17 6 3887 4057 663105160 663104987 3.620000e-36 163.0
44 TraesCS3B01G456000 chr1A 84.270 178 17 6 3887 4057 554477817 554477644 3.620000e-36 163.0
45 TraesCS3B01G456000 chr1A 88.136 59 6 1 179 236 10087733 10087675 8.110000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G456000 chr3B 697564597 697569114 4517 True 8344.000000 8344 100.000000 1 4518 1 chr3B.!!$R3 4517
1 TraesCS3B01G456000 chr3B 675579931 675581518 1587 False 989.000000 989 78.401000 1865 3519 1 chr3B.!!$F1 1654
2 TraesCS3B01G456000 chr3D 527481388 527486755 5367 False 1572.033333 4349 87.922667 1 3805 3 chr3D.!!$F3 3804
3 TraesCS3B01G456000 chr3D 512979370 512981478 2108 False 1328.000000 1328 78.558000 1388 3519 1 chr3D.!!$F2 2131
4 TraesCS3B01G456000 chr3D 527505671 527509078 3407 False 1256.000000 2586 87.552000 802 4057 3 chr3D.!!$F4 3255
5 TraesCS3B01G456000 chr3A 648532253 648536966 4713 False 690.500000 909 77.797000 1385 2846 2 chr3A.!!$F2 1461
6 TraesCS3B01G456000 chr3A 648549240 648551087 1847 False 552.500000 809 78.735000 1385 3131 2 chr3A.!!$F3 1746

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
720 881 0.037882 CCGTCAGCAAGCAGAGAAGA 60.038 55.0 0.0 0.0 0.0 2.87 F
1430 1658 0.829990 CCTGGTTGGTTTGGCACTTT 59.170 50.0 0.0 0.0 0.0 2.66 F
1667 5163 0.038892 GTTTGGACGACTACCAGCGA 60.039 55.0 0.0 0.0 38.7 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1647 5143 0.038526 CGCTGGTAGTCGTCCAAACT 60.039 55.0 0.0 0.0 34.35 2.66 R
3421 7205 0.672401 TCCCTCGGCTAACTTTTGCG 60.672 55.0 0.0 0.0 0.00 4.85 R
3663 7461 0.391130 TACATGCTCCGAAGTGTGCC 60.391 55.0 0.0 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.528824 CCGTGATGGGAGCCTGAAT 59.471 57.895 0.00 0.00 0.00 2.57
68 69 2.749044 CTGCGGCCACTTCAGCAT 60.749 61.111 2.24 0.00 39.02 3.79
91 92 6.590234 TGTAGCTCTTGATCACTTGTCTTA 57.410 37.500 0.00 0.00 0.00 2.10
95 96 6.471146 AGCTCTTGATCACTTGTCTTATTGT 58.529 36.000 0.00 0.00 0.00 2.71
96 97 6.593382 AGCTCTTGATCACTTGTCTTATTGTC 59.407 38.462 0.00 0.00 0.00 3.18
97 98 6.369890 GCTCTTGATCACTTGTCTTATTGTCA 59.630 38.462 0.00 0.00 0.00 3.58
108 109 5.547465 TGTCTTATTGTCATGACGTCCTTT 58.453 37.500 20.54 4.62 32.64 3.11
138 139 1.501337 AAAAACCGAGCCGAACCGAC 61.501 55.000 0.00 0.00 0.00 4.79
146 147 1.872679 GCCGAACCGACGATCTGAC 60.873 63.158 0.00 0.00 35.09 3.51
176 177 0.327924 ATGAACCGATGTCTTGCCCA 59.672 50.000 0.00 0.00 0.00 5.36
179 180 0.110486 AACCGATGTCTTGCCCAGTT 59.890 50.000 0.00 0.00 0.00 3.16
194 195 2.815503 CCCAGTTTTTAAGGTGTACCGG 59.184 50.000 0.00 0.00 42.08 5.28
204 205 6.909550 TTAAGGTGTACCGGTCTTTTAGTA 57.090 37.500 12.40 0.00 42.08 1.82
209 210 7.226441 AGGTGTACCGGTCTTTTAGTAAAAAT 58.774 34.615 12.40 0.00 42.08 1.82
210 211 7.388776 AGGTGTACCGGTCTTTTAGTAAAAATC 59.611 37.037 12.40 5.50 42.08 2.17
214 215 6.536447 ACCGGTCTTTTAGTAAAAATCAGGA 58.464 36.000 22.43 10.75 34.18 3.86
251 255 1.401552 TGCATCGAAGGTAAAGCATGC 59.598 47.619 10.51 10.51 37.69 4.06
264 268 4.660789 AAAGCATGCTAAAGGCCAATAG 57.339 40.909 23.00 8.07 40.92 1.73
290 294 7.602265 GCCAACAAGGATAATAACAATTTGTGT 59.398 33.333 2.13 0.00 40.89 3.72
355 359 9.979578 TTTTTGAAAGCATTCAGTATTATGTGT 57.020 25.926 4.36 0.00 45.82 3.72
377 381 9.295825 TGTGTATTCATTTGATTAAGGTCAACT 57.704 29.630 0.00 0.00 37.80 3.16
415 419 9.939802 ACCTTAAGTATTCTTACTTTTCGTCAT 57.060 29.630 0.97 0.00 44.48 3.06
432 436 3.270877 GTCATAAATGAACCGGCAGTCT 58.729 45.455 0.00 0.00 38.75 3.24
433 437 3.063997 GTCATAAATGAACCGGCAGTCTG 59.936 47.826 0.00 0.00 38.75 3.51
444 448 3.244422 ACCGGCAGTCTGATCAGTAAAAA 60.244 43.478 21.92 0.00 0.00 1.94
446 450 3.997021 CGGCAGTCTGATCAGTAAAAACT 59.003 43.478 21.92 14.44 0.00 2.66
453 457 7.012327 CAGTCTGATCAGTAAAAACTTGAACCA 59.988 37.037 21.92 0.00 0.00 3.67
457 461 9.364989 CTGATCAGTAAAAACTTGAACCAAAAA 57.635 29.630 14.95 0.00 0.00 1.94
462 466 7.600752 CAGTAAAAACTTGAACCAAAAACCTCA 59.399 33.333 0.00 0.00 0.00 3.86
476 480 2.109425 ACCTCATCGGTTAAGTTGCC 57.891 50.000 0.00 0.00 46.37 4.52
477 481 1.674817 ACCTCATCGGTTAAGTTGCCG 60.675 52.381 12.65 12.65 46.37 5.69
478 482 4.880047 ACCTCATCGGTTAAGTTGCCGG 62.880 54.545 16.95 0.00 46.37 6.13
482 486 1.494189 CGGTTAAGTTGCCGGTTCG 59.506 57.895 1.90 0.00 43.85 3.95
507 511 3.791973 TTTAAACTATGCCATTGCCCG 57.208 42.857 0.00 0.00 36.33 6.13
508 512 1.686355 TAAACTATGCCATTGCCCGG 58.314 50.000 0.00 0.00 36.33 5.73
515 519 3.530260 CCATTGCCCGGCATCACC 61.530 66.667 14.30 0.00 38.76 4.02
516 520 2.440796 CATTGCCCGGCATCACCT 60.441 61.111 14.30 0.00 38.76 4.00
517 521 2.124151 ATTGCCCGGCATCACCTC 60.124 61.111 14.30 0.00 38.76 3.85
518 522 3.721370 ATTGCCCGGCATCACCTCC 62.721 63.158 14.30 0.00 38.76 4.30
520 524 4.864334 GCCCGGCATCACCTCCTG 62.864 72.222 3.91 0.00 35.61 3.86
521 525 4.864334 CCCGGCATCACCTCCTGC 62.864 72.222 0.00 0.00 37.66 4.85
522 526 4.100084 CCGGCATCACCTCCTGCA 62.100 66.667 0.00 0.00 40.18 4.41
523 527 2.191375 CGGCATCACCTCCTGCAT 59.809 61.111 0.00 0.00 40.18 3.96
526 530 0.534652 GGCATCACCTCCTGCATCTC 60.535 60.000 0.00 0.00 40.18 2.75
527 531 0.534652 GCATCACCTCCTGCATCTCC 60.535 60.000 0.00 0.00 38.28 3.71
528 532 0.835276 CATCACCTCCTGCATCTCCA 59.165 55.000 0.00 0.00 0.00 3.86
530 534 1.222936 CACCTCCTGCATCTCCACC 59.777 63.158 0.00 0.00 0.00 4.61
531 535 2.362369 ACCTCCTGCATCTCCACCG 61.362 63.158 0.00 0.00 0.00 4.94
533 537 3.746949 CTCCTGCATCTCCACCGGC 62.747 68.421 0.00 0.00 0.00 6.13
538 542 4.552365 CATCTCCACCGGCGCCAT 62.552 66.667 28.98 11.47 0.00 4.40
539 543 4.552365 ATCTCCACCGGCGCCATG 62.552 66.667 28.98 23.21 0.00 3.66
544 548 4.758251 CACCGGCGCCATGTCTGA 62.758 66.667 28.98 0.00 0.00 3.27
545 549 3.785859 ACCGGCGCCATGTCTGAT 61.786 61.111 28.98 0.00 0.00 2.90
546 550 3.274586 CCGGCGCCATGTCTGATG 61.275 66.667 28.98 6.19 0.00 3.07
547 551 3.274586 CGGCGCCATGTCTGATGG 61.275 66.667 28.98 0.98 41.99 3.51
596 757 3.691744 GAGAGTCAGGAGCACGCCG 62.692 68.421 0.00 0.00 0.00 6.46
631 792 1.306568 ACAGAGAAGGGGAGGAGGC 60.307 63.158 0.00 0.00 0.00 4.70
677 838 1.828768 CTGGAGCCTCAGATGGGAC 59.171 63.158 0.00 0.00 36.93 4.46
718 879 0.601046 CACCGTCAGCAAGCAGAGAA 60.601 55.000 0.00 0.00 0.00 2.87
719 880 0.320247 ACCGTCAGCAAGCAGAGAAG 60.320 55.000 0.00 0.00 0.00 2.85
720 881 0.037882 CCGTCAGCAAGCAGAGAAGA 60.038 55.000 0.00 0.00 0.00 2.87
721 882 1.348276 CGTCAGCAAGCAGAGAAGAG 58.652 55.000 0.00 0.00 0.00 2.85
722 883 1.067985 CGTCAGCAAGCAGAGAAGAGA 60.068 52.381 0.00 0.00 0.00 3.10
723 884 2.336667 GTCAGCAAGCAGAGAAGAGAC 58.663 52.381 0.00 0.00 0.00 3.36
724 885 2.029110 GTCAGCAAGCAGAGAAGAGACT 60.029 50.000 0.00 0.00 0.00 3.24
725 886 3.192422 GTCAGCAAGCAGAGAAGAGACTA 59.808 47.826 0.00 0.00 0.00 2.59
731 892 5.336372 GCAAGCAGAGAAGAGACTAAGAGAA 60.336 44.000 0.00 0.00 0.00 2.87
735 896 6.891908 AGCAGAGAAGAGACTAAGAGAAAGAT 59.108 38.462 0.00 0.00 0.00 2.40
760 927 1.386533 GGTCATGGGCAGTGATTCTG 58.613 55.000 0.00 0.00 46.12 3.02
861 1032 1.827969 CGTCTTCATCTCCACCTCCTT 59.172 52.381 0.00 0.00 0.00 3.36
910 1085 3.417275 CTTGGATCCGCGAGCGAGT 62.417 63.158 19.72 6.67 42.83 4.18
937 1112 2.618053 CGAATTTTCGCTGGGTAGACT 58.382 47.619 0.00 0.00 44.26 3.24
1027 1205 1.635487 AGTTAATTCCTCCTGCCAGCA 59.365 47.619 0.00 0.00 0.00 4.41
1047 1225 2.610694 CGGCACCAGCAGTTCACAG 61.611 63.158 0.00 0.00 44.61 3.66
1068 1246 2.030805 GGAAAGCACATGGACACAAGAC 60.031 50.000 0.00 0.00 0.00 3.01
1071 1249 2.224606 AGCACATGGACACAAGACAAG 58.775 47.619 0.00 0.00 0.00 3.16
1072 1250 1.267806 GCACATGGACACAAGACAAGG 59.732 52.381 0.00 0.00 0.00 3.61
1078 1295 1.429463 GACACAAGACAAGGCGGTAG 58.571 55.000 0.00 0.00 0.00 3.18
1108 1328 3.458044 TCCCAGCTACAGAAGAGAAGA 57.542 47.619 0.00 0.00 0.00 2.87
1109 1329 3.779444 TCCCAGCTACAGAAGAGAAGAA 58.221 45.455 0.00 0.00 0.00 2.52
1110 1330 4.160329 TCCCAGCTACAGAAGAGAAGAAA 58.840 43.478 0.00 0.00 0.00 2.52
1129 1349 4.770010 AGAAAGTTCCAACTGACCACAAAA 59.230 37.500 0.00 0.00 39.66 2.44
1367 1587 5.473504 ACCTTGAGCGTCAGAACATTTAATT 59.526 36.000 0.00 0.00 0.00 1.40
1428 1656 4.275781 CCTGGTTGGTTTGGCACT 57.724 55.556 0.00 0.00 0.00 4.40
1429 1657 2.515288 CCTGGTTGGTTTGGCACTT 58.485 52.632 0.00 0.00 0.00 3.16
1430 1658 0.829990 CCTGGTTGGTTTGGCACTTT 59.170 50.000 0.00 0.00 0.00 2.66
1431 1659 1.209261 CCTGGTTGGTTTGGCACTTTT 59.791 47.619 0.00 0.00 0.00 2.27
1432 1660 2.278854 CTGGTTGGTTTGGCACTTTTG 58.721 47.619 0.00 0.00 0.00 2.44
1449 1677 5.700832 CACTTTTGCCTGTGTATCTGAGTAA 59.299 40.000 0.00 0.00 0.00 2.24
1450 1678 5.701290 ACTTTTGCCTGTGTATCTGAGTAAC 59.299 40.000 0.00 0.00 0.00 2.50
1539 1772 4.104383 AGAAAGAAACTGGAGGATGCAA 57.896 40.909 0.00 0.00 34.45 4.08
1558 1791 3.741075 GCAAAAAGGAACAAGGAGTTGGG 60.741 47.826 0.00 0.00 41.51 4.12
1613 5109 1.363744 GCGTCAAACAGGATCCTGAG 58.636 55.000 41.91 29.84 46.30 3.35
1667 5163 0.038892 GTTTGGACGACTACCAGCGA 60.039 55.000 0.00 0.00 38.70 4.93
1668 5164 0.675083 TTTGGACGACTACCAGCGAA 59.325 50.000 0.00 0.00 38.70 4.70
1698 5194 4.242475 TCGTGATGATGTAGGTCAACAAC 58.758 43.478 0.00 0.00 33.52 3.32
1701 5197 4.393062 GTGATGATGTAGGTCAACAACTGG 59.607 45.833 0.00 0.00 33.52 4.00
1732 5228 7.122055 TCCATGCCGATTAGTTTAACTTTCATT 59.878 33.333 1.94 0.00 0.00 2.57
1759 5255 5.686841 TGCTGACTTGATCAAATTTGTTTCG 59.313 36.000 17.47 6.83 36.69 3.46
1760 5256 5.117592 GCTGACTTGATCAAATTTGTTTCGG 59.882 40.000 17.47 9.75 36.69 4.30
1854 5454 7.607991 GGTTGGACCATGATTATACTCCTTATG 59.392 40.741 0.00 0.00 38.42 1.90
1983 5588 3.557228 TTCCTTTTTGTGCAGCCAATT 57.443 38.095 0.00 0.00 0.00 2.32
2022 5627 1.563924 ACCGCCTGACTTACCATACA 58.436 50.000 0.00 0.00 0.00 2.29
2027 5632 3.650139 GCCTGACTTACCATACATACCG 58.350 50.000 0.00 0.00 0.00 4.02
2502 6123 3.248602 CGGTTTGACTTCAAAGACAGGAG 59.751 47.826 4.61 0.00 45.36 3.69
2603 6230 2.929398 CACAACCAAGAAAACTTGTGGC 59.071 45.455 0.00 0.00 39.79 5.01
2604 6231 2.831526 ACAACCAAGAAAACTTGTGGCT 59.168 40.909 0.00 0.00 34.27 4.75
2650 6402 6.366877 GCTTTGTATGCTTGTTGACATTGATT 59.633 34.615 0.00 0.00 0.00 2.57
2655 6407 7.924947 TGTATGCTTGTTGACATTGATTTTCAA 59.075 29.630 0.00 0.00 41.09 2.69
2827 6581 6.015180 ACATCACATATAATGTCCATTTGGCC 60.015 38.462 0.00 0.00 42.70 5.36
2845 6599 9.603921 CATTTGGCCTCATCAACTAATTAATTT 57.396 29.630 5.91 0.00 0.00 1.82
2912 6666 8.920665 TGTTTCACTAATTGTTCTGTTTGTTTG 58.079 29.630 0.00 0.00 0.00 2.93
2913 6667 8.379902 GTTTCACTAATTGTTCTGTTTGTTTGG 58.620 33.333 0.00 0.00 0.00 3.28
2955 6709 2.621998 GTGGATGGCATTGATGAGAAGG 59.378 50.000 0.00 0.00 0.00 3.46
2956 6710 2.242965 TGGATGGCATTGATGAGAAGGT 59.757 45.455 0.00 0.00 0.00 3.50
2957 6711 3.459227 TGGATGGCATTGATGAGAAGGTA 59.541 43.478 0.00 0.00 0.00 3.08
2973 6730 5.691896 AGAAGGTAGTAAGCTTGGTTTGTT 58.308 37.500 9.86 0.00 43.36 2.83
2984 6742 3.006752 GCTTGGTTTGTTTGGATCCATGA 59.993 43.478 17.06 4.60 0.00 3.07
3010 6768 8.462016 ACTGGTTAGAATCTTTTACATTGATGC 58.538 33.333 0.00 0.00 0.00 3.91
3157 6922 2.466846 TCTGATCCGTCTCCAATTGGA 58.533 47.619 25.53 25.53 43.08 3.53
3174 6939 7.015098 TCCAATTGGATTTCTTTTGCTGAAGTA 59.985 33.333 23.63 0.00 39.78 2.24
3175 6940 7.820872 CCAATTGGATTTCTTTTGCTGAAGTAT 59.179 33.333 20.50 0.00 37.39 2.12
3180 6945 8.514594 TGGATTTCTTTTGCTGAAGTATAAGTG 58.485 33.333 0.00 0.00 0.00 3.16
3281 7047 2.344025 GTTGATTCCCACAGGTACGAC 58.656 52.381 0.00 0.00 0.00 4.34
3406 7190 2.333581 CAACGCGGGGAAAACCAC 59.666 61.111 12.47 0.00 42.91 4.16
3421 7205 2.644992 CACGGTGAAGCAAAGGCC 59.355 61.111 0.74 0.00 42.56 5.19
3426 7210 1.067250 GTGAAGCAAAGGCCGCAAA 59.933 52.632 0.00 0.00 42.56 3.68
3473 7257 1.880027 AGCGAAGAATGGTTGTTGGTC 59.120 47.619 0.00 0.00 0.00 4.02
3474 7258 1.880027 GCGAAGAATGGTTGTTGGTCT 59.120 47.619 0.00 0.00 0.00 3.85
3475 7259 2.350772 GCGAAGAATGGTTGTTGGTCTG 60.351 50.000 0.00 0.00 0.00 3.51
3476 7260 2.878406 CGAAGAATGGTTGTTGGTCTGT 59.122 45.455 0.00 0.00 0.00 3.41
3477 7261 3.315191 CGAAGAATGGTTGTTGGTCTGTT 59.685 43.478 0.00 0.00 0.00 3.16
3478 7262 4.610945 GAAGAATGGTTGTTGGTCTGTTG 58.389 43.478 0.00 0.00 0.00 3.33
3571 7364 2.158475 AGCAGAGAATGGTTGGTTTCCA 60.158 45.455 0.00 0.00 35.67 3.53
3584 7377 3.892284 TGGTTTCCAGTGCTGTTTCTAA 58.108 40.909 0.00 0.00 0.00 2.10
3635 7430 6.459298 GCTCTTTTATGATGTCATTGTCCCTG 60.459 42.308 0.19 0.00 37.76 4.45
3662 7460 2.303890 TGTGCTCATATATCCAGGGCAG 59.696 50.000 0.00 0.00 0.00 4.85
3663 7461 1.911357 TGCTCATATATCCAGGGCAGG 59.089 52.381 0.00 0.00 0.00 4.85
3680 7478 2.401766 GGGCACACTTCGGAGCATG 61.402 63.158 0.00 0.00 0.00 4.06
3691 7518 4.827835 ACTTCGGAGCATGTATAGCTTAGA 59.172 41.667 0.00 0.00 43.58 2.10
3719 7546 9.801714 TTTTTCTAAAGCGTAGAACTTATTTCG 57.198 29.630 11.19 0.00 39.47 3.46
3721 7548 4.595198 AAAGCGTAGAACTTATTTCGGC 57.405 40.909 0.00 0.00 39.47 5.54
3833 9181 1.548719 CAGACGGGAATGTGTACTCCA 59.451 52.381 1.71 0.00 32.95 3.86
3851 9199 2.432285 CGGGTTGCCAAATTGCGG 60.432 61.111 0.00 0.00 0.00 5.69
3854 9202 0.533978 GGGTTGCCAAATTGCGGTTT 60.534 50.000 0.00 0.00 0.00 3.27
3855 9203 0.865111 GGTTGCCAAATTGCGGTTTC 59.135 50.000 0.00 0.00 0.00 2.78
3858 9206 0.318275 TGCCAAATTGCGGTTTCGTC 60.318 50.000 0.00 0.00 38.89 4.20
3859 9207 1.006825 GCCAAATTGCGGTTTCGTCC 61.007 55.000 0.00 0.00 38.89 4.79
3895 9243 5.822519 GGCCTGTGAATACATGAAATAGTCA 59.177 40.000 0.00 0.00 41.67 3.41
3908 9256 7.119846 ACATGAAATAGTCAACTTGGCTAACTC 59.880 37.037 7.19 7.45 38.17 3.01
3909 9257 6.530120 TGAAATAGTCAACTTGGCTAACTCA 58.470 36.000 7.19 9.61 38.17 3.41
3913 9261 5.948992 AGTCAACTTGGCTAACTCAATTC 57.051 39.130 0.00 0.00 25.47 2.17
3917 9265 7.389053 AGTCAACTTGGCTAACTCAATTCTTAG 59.611 37.037 0.00 0.00 25.47 2.18
3928 9276 7.979444 AACTCAATTCTTAGGAAATCGTGAA 57.021 32.000 0.00 0.00 34.90 3.18
3952 9300 7.692460 ATAAGATCATTTGCTCTGACAACAA 57.308 32.000 0.00 0.00 0.00 2.83
3955 9303 5.766670 AGATCATTTGCTCTGACAACAAGAA 59.233 36.000 0.00 0.00 0.00 2.52
3969 9317 2.110578 ACAAGAAAAGCACCAGCCTTT 58.889 42.857 0.00 0.00 43.56 3.11
3972 9320 3.459232 AGAAAAGCACCAGCCTTTTTC 57.541 42.857 6.76 6.76 41.51 2.29
3973 9321 2.103094 AGAAAAGCACCAGCCTTTTTCC 59.897 45.455 9.75 0.00 41.84 3.13
3987 9336 2.805290 TTTTCCCCCTTGTTCCCATT 57.195 45.000 0.00 0.00 0.00 3.16
3990 9339 1.466858 TCCCCCTTGTTCCCATTTCT 58.533 50.000 0.00 0.00 0.00 2.52
4003 9352 6.014840 TGTTCCCATTTCTTAGACGACTAACT 60.015 38.462 3.16 0.00 35.19 2.24
4074 9423 8.611654 ACGTGTTAACAAGTAGGAAATTATGT 57.388 30.769 23.11 0.00 36.83 2.29
4075 9424 9.059260 ACGTGTTAACAAGTAGGAAATTATGTT 57.941 29.630 23.11 0.00 36.83 2.71
4076 9425 9.887406 CGTGTTAACAAGTAGGAAATTATGTTT 57.113 29.630 10.51 0.00 33.48 2.83
4085 9434 9.893305 AAGTAGGAAATTATGTTTTTCTTGTCG 57.107 29.630 0.00 0.00 34.29 4.35
4086 9435 9.280174 AGTAGGAAATTATGTTTTTCTTGTCGA 57.720 29.630 0.00 0.00 34.29 4.20
4087 9436 9.887406 GTAGGAAATTATGTTTTTCTTGTCGAA 57.113 29.630 0.00 0.00 34.29 3.71
4089 9438 9.626045 AGGAAATTATGTTTTTCTTGTCGAATC 57.374 29.630 0.00 0.00 34.29 2.52
4090 9439 8.860128 GGAAATTATGTTTTTCTTGTCGAATCC 58.140 33.333 0.00 0.00 34.29 3.01
4091 9440 9.405587 GAAATTATGTTTTTCTTGTCGAATCCA 57.594 29.630 0.00 0.00 31.76 3.41
4092 9441 9.757227 AAATTATGTTTTTCTTGTCGAATCCAA 57.243 25.926 0.00 0.00 0.00 3.53
4093 9442 8.742554 ATTATGTTTTTCTTGTCGAATCCAAC 57.257 30.769 0.00 0.00 0.00 3.77
4094 9443 4.593157 TGTTTTTCTTGTCGAATCCAACG 58.407 39.130 0.00 0.00 0.00 4.10
4095 9444 4.333095 TGTTTTTCTTGTCGAATCCAACGA 59.667 37.500 0.00 0.00 37.43 3.85
4096 9445 4.725556 TTTTCTTGTCGAATCCAACGAG 57.274 40.909 0.00 0.00 40.37 4.18
4097 9446 2.363788 TCTTGTCGAATCCAACGAGG 57.636 50.000 0.00 0.00 40.37 4.63
4109 9458 4.796038 TCCAACGAGGAGTTAAAGGTAG 57.204 45.455 0.00 0.00 43.07 3.18
4110 9459 4.410099 TCCAACGAGGAGTTAAAGGTAGA 58.590 43.478 0.00 0.00 43.07 2.59
4111 9460 4.834496 TCCAACGAGGAGTTAAAGGTAGAA 59.166 41.667 0.00 0.00 43.07 2.10
4112 9461 4.928020 CCAACGAGGAGTTAAAGGTAGAAC 59.072 45.833 0.00 0.00 42.02 3.01
4113 9462 5.510179 CCAACGAGGAGTTAAAGGTAGAACA 60.510 44.000 0.00 0.00 42.02 3.18
4114 9463 5.388408 ACGAGGAGTTAAAGGTAGAACAG 57.612 43.478 0.00 0.00 0.00 3.16
4115 9464 5.075493 ACGAGGAGTTAAAGGTAGAACAGA 58.925 41.667 0.00 0.00 0.00 3.41
4116 9465 5.715753 ACGAGGAGTTAAAGGTAGAACAGAT 59.284 40.000 0.00 0.00 0.00 2.90
4117 9466 6.888632 ACGAGGAGTTAAAGGTAGAACAGATA 59.111 38.462 0.00 0.00 0.00 1.98
4118 9467 7.560626 ACGAGGAGTTAAAGGTAGAACAGATAT 59.439 37.037 0.00 0.00 0.00 1.63
4119 9468 8.414778 CGAGGAGTTAAAGGTAGAACAGATATT 58.585 37.037 0.00 0.00 0.00 1.28
4122 9471 9.327628 GGAGTTAAAGGTAGAACAGATATTTCC 57.672 37.037 0.00 0.00 0.00 3.13
4125 9474 9.886132 GTTAAAGGTAGAACAGATATTTCCTCA 57.114 33.333 0.00 0.00 0.00 3.86
4128 9477 9.981460 AAAGGTAGAACAGATATTTCCTCAAAT 57.019 29.630 0.00 0.00 36.18 2.32
4129 9478 9.981460 AAGGTAGAACAGATATTTCCTCAAATT 57.019 29.630 0.00 0.00 33.95 1.82
4130 9479 9.620259 AGGTAGAACAGATATTTCCTCAAATTC 57.380 33.333 0.00 0.00 33.95 2.17
4131 9480 9.620259 GGTAGAACAGATATTTCCTCAAATTCT 57.380 33.333 0.00 0.00 33.95 2.40
4137 9486 9.482627 ACAGATATTTCCTCAAATTCTATCGAC 57.517 33.333 0.00 0.00 33.95 4.20
4138 9487 8.930760 CAGATATTTCCTCAAATTCTATCGACC 58.069 37.037 0.00 0.00 33.95 4.79
4139 9488 8.651389 AGATATTTCCTCAAATTCTATCGACCA 58.349 33.333 0.00 0.00 33.95 4.02
4140 9489 9.273016 GATATTTCCTCAAATTCTATCGACCAA 57.727 33.333 0.00 0.00 33.95 3.67
4141 9490 7.938140 ATTTCCTCAAATTCTATCGACCAAA 57.062 32.000 0.00 0.00 0.00 3.28
4142 9491 6.985188 TTCCTCAAATTCTATCGACCAAAG 57.015 37.500 0.00 0.00 0.00 2.77
4143 9492 6.294361 TCCTCAAATTCTATCGACCAAAGA 57.706 37.500 0.00 0.00 0.00 2.52
4144 9493 6.889198 TCCTCAAATTCTATCGACCAAAGAT 58.111 36.000 0.00 0.00 0.00 2.40
4145 9494 8.018537 TCCTCAAATTCTATCGACCAAAGATA 57.981 34.615 0.00 0.00 0.00 1.98
4146 9495 7.926555 TCCTCAAATTCTATCGACCAAAGATAC 59.073 37.037 0.00 0.00 0.00 2.24
4147 9496 7.710907 CCTCAAATTCTATCGACCAAAGATACA 59.289 37.037 0.00 0.00 0.00 2.29
4148 9497 9.098355 CTCAAATTCTATCGACCAAAGATACAA 57.902 33.333 0.00 0.00 0.00 2.41
4149 9498 8.879759 TCAAATTCTATCGACCAAAGATACAAC 58.120 33.333 0.00 0.00 0.00 3.32
4150 9499 8.883731 CAAATTCTATCGACCAAAGATACAACT 58.116 33.333 0.00 0.00 0.00 3.16
4151 9500 8.649973 AATTCTATCGACCAAAGATACAACTC 57.350 34.615 0.00 0.00 0.00 3.01
4152 9501 7.406031 TTCTATCGACCAAAGATACAACTCT 57.594 36.000 0.00 0.00 0.00 3.24
4153 9502 8.515695 TTCTATCGACCAAAGATACAACTCTA 57.484 34.615 0.00 0.00 0.00 2.43
4154 9503 7.928103 TCTATCGACCAAAGATACAACTCTAC 58.072 38.462 0.00 0.00 0.00 2.59
4155 9504 5.970317 TCGACCAAAGATACAACTCTACA 57.030 39.130 0.00 0.00 0.00 2.74
4156 9505 5.706916 TCGACCAAAGATACAACTCTACAC 58.293 41.667 0.00 0.00 0.00 2.90
4157 9506 5.242171 TCGACCAAAGATACAACTCTACACA 59.758 40.000 0.00 0.00 0.00 3.72
4158 9507 5.345202 CGACCAAAGATACAACTCTACACAC 59.655 44.000 0.00 0.00 0.00 3.82
4159 9508 6.169557 ACCAAAGATACAACTCTACACACA 57.830 37.500 0.00 0.00 0.00 3.72
4160 9509 5.989777 ACCAAAGATACAACTCTACACACAC 59.010 40.000 0.00 0.00 0.00 3.82
4161 9510 6.183360 ACCAAAGATACAACTCTACACACACT 60.183 38.462 0.00 0.00 0.00 3.55
4162 9511 6.706270 CCAAAGATACAACTCTACACACACTT 59.294 38.462 0.00 0.00 0.00 3.16
4163 9512 7.870954 CCAAAGATACAACTCTACACACACTTA 59.129 37.037 0.00 0.00 0.00 2.24
4164 9513 9.256477 CAAAGATACAACTCTACACACACTTAA 57.744 33.333 0.00 0.00 0.00 1.85
4165 9514 8.813643 AAGATACAACTCTACACACACTTAAC 57.186 34.615 0.00 0.00 0.00 2.01
4166 9515 8.179509 AGATACAACTCTACACACACTTAACT 57.820 34.615 0.00 0.00 0.00 2.24
4167 9516 8.639761 AGATACAACTCTACACACACTTAACTT 58.360 33.333 0.00 0.00 0.00 2.66
4168 9517 9.257651 GATACAACTCTACACACACTTAACTTT 57.742 33.333 0.00 0.00 0.00 2.66
4169 9518 7.535489 ACAACTCTACACACACTTAACTTTC 57.465 36.000 0.00 0.00 0.00 2.62
4170 9519 7.101054 ACAACTCTACACACACTTAACTTTCA 58.899 34.615 0.00 0.00 0.00 2.69
4171 9520 7.769044 ACAACTCTACACACACTTAACTTTCAT 59.231 33.333 0.00 0.00 0.00 2.57
4172 9521 8.612619 CAACTCTACACACACTTAACTTTCATT 58.387 33.333 0.00 0.00 0.00 2.57
4173 9522 8.732746 ACTCTACACACACTTAACTTTCATTT 57.267 30.769 0.00 0.00 0.00 2.32
4174 9523 9.174166 ACTCTACACACACTTAACTTTCATTTT 57.826 29.630 0.00 0.00 0.00 1.82
4177 9526 9.659830 CTACACACACTTAACTTTCATTTTACC 57.340 33.333 0.00 0.00 0.00 2.85
4178 9527 8.288689 ACACACACTTAACTTTCATTTTACCT 57.711 30.769 0.00 0.00 0.00 3.08
4179 9528 9.398538 ACACACACTTAACTTTCATTTTACCTA 57.601 29.630 0.00 0.00 0.00 3.08
4180 9529 9.878599 CACACACTTAACTTTCATTTTACCTAG 57.121 33.333 0.00 0.00 0.00 3.02
4181 9530 9.841295 ACACACTTAACTTTCATTTTACCTAGA 57.159 29.630 0.00 0.00 0.00 2.43
4296 9645 7.835822 ACATATCTATTGAGTAGATCAGTGGC 58.164 38.462 0.41 0.00 45.02 5.01
4297 9646 4.837896 TCTATTGAGTAGATCAGTGGCG 57.162 45.455 0.00 0.00 39.68 5.69
4298 9647 4.461198 TCTATTGAGTAGATCAGTGGCGA 58.539 43.478 0.00 0.00 39.68 5.54
4299 9648 4.887655 TCTATTGAGTAGATCAGTGGCGAA 59.112 41.667 0.00 0.00 39.68 4.70
4300 9649 3.510388 TTGAGTAGATCAGTGGCGAAG 57.490 47.619 0.00 0.00 39.68 3.79
4301 9650 2.447443 TGAGTAGATCAGTGGCGAAGT 58.553 47.619 0.00 0.00 32.77 3.01
4302 9651 3.617284 TGAGTAGATCAGTGGCGAAGTA 58.383 45.455 0.00 0.00 32.77 2.24
4303 9652 4.207955 TGAGTAGATCAGTGGCGAAGTAT 58.792 43.478 0.00 0.00 32.77 2.12
4304 9653 4.645136 TGAGTAGATCAGTGGCGAAGTATT 59.355 41.667 0.00 0.00 32.77 1.89
4305 9654 4.938080 AGTAGATCAGTGGCGAAGTATTG 58.062 43.478 0.00 0.00 0.00 1.90
4306 9655 4.645136 AGTAGATCAGTGGCGAAGTATTGA 59.355 41.667 0.00 0.00 0.00 2.57
4307 9656 4.052159 AGATCAGTGGCGAAGTATTGAG 57.948 45.455 0.00 0.00 0.00 3.02
4308 9657 3.449018 AGATCAGTGGCGAAGTATTGAGT 59.551 43.478 0.00 0.00 0.00 3.41
4309 9658 4.645136 AGATCAGTGGCGAAGTATTGAGTA 59.355 41.667 0.00 0.00 0.00 2.59
4310 9659 4.371855 TCAGTGGCGAAGTATTGAGTAG 57.628 45.455 0.00 0.00 0.00 2.57
4311 9660 3.762288 TCAGTGGCGAAGTATTGAGTAGT 59.238 43.478 0.00 0.00 0.00 2.73
4312 9661 4.106197 CAGTGGCGAAGTATTGAGTAGTC 58.894 47.826 0.00 0.00 0.00 2.59
4313 9662 4.017808 AGTGGCGAAGTATTGAGTAGTCT 58.982 43.478 0.00 0.00 0.00 3.24
4314 9663 4.463186 AGTGGCGAAGTATTGAGTAGTCTT 59.537 41.667 0.00 0.00 0.00 3.01
4315 9664 5.651139 AGTGGCGAAGTATTGAGTAGTCTTA 59.349 40.000 0.00 0.00 0.00 2.10
4316 9665 6.321690 AGTGGCGAAGTATTGAGTAGTCTTAT 59.678 38.462 0.00 0.00 0.00 1.73
4317 9666 7.501559 AGTGGCGAAGTATTGAGTAGTCTTATA 59.498 37.037 0.00 0.00 0.00 0.98
4318 9667 7.804129 GTGGCGAAGTATTGAGTAGTCTTATAG 59.196 40.741 0.00 0.00 0.00 1.31
4319 9668 7.501559 TGGCGAAGTATTGAGTAGTCTTATAGT 59.498 37.037 0.00 0.00 0.00 2.12
4320 9669 8.351461 GGCGAAGTATTGAGTAGTCTTATAGTT 58.649 37.037 0.00 6.19 0.00 2.24
4321 9670 9.733219 GCGAAGTATTGAGTAGTCTTATAGTTT 57.267 33.333 0.00 0.00 0.00 2.66
4343 9692 9.836864 AGTTTTGCATATCTATGTTGTAGATCA 57.163 29.630 0.00 0.00 35.95 2.92
4347 9696 8.782339 TGCATATCTATGTTGTAGATCAATGG 57.218 34.615 0.00 0.00 38.38 3.16
4348 9697 8.377799 TGCATATCTATGTTGTAGATCAATGGT 58.622 33.333 0.00 0.00 38.38 3.55
4349 9698 8.877779 GCATATCTATGTTGTAGATCAATGGTC 58.122 37.037 0.00 0.00 38.38 4.02
4350 9699 9.933723 CATATCTATGTTGTAGATCAATGGTCA 57.066 33.333 0.00 0.00 38.38 4.02
4352 9701 7.660030 TCTATGTTGTAGATCAATGGTCAGA 57.340 36.000 0.00 0.00 38.38 3.27
4353 9702 7.720442 TCTATGTTGTAGATCAATGGTCAGAG 58.280 38.462 0.00 0.00 38.38 3.35
4354 9703 4.507710 TGTTGTAGATCAATGGTCAGAGC 58.492 43.478 0.00 0.00 38.38 4.09
4355 9704 4.223700 TGTTGTAGATCAATGGTCAGAGCT 59.776 41.667 0.00 0.00 38.38 4.09
4356 9705 5.422012 TGTTGTAGATCAATGGTCAGAGCTA 59.578 40.000 0.00 0.00 38.38 3.32
4358 9707 4.877282 GTAGATCAATGGTCAGAGCTACC 58.123 47.826 6.59 0.00 44.01 3.18
4359 9708 2.363680 AGATCAATGGTCAGAGCTACCG 59.636 50.000 0.00 0.00 40.08 4.02
4360 9709 1.557099 TCAATGGTCAGAGCTACCGT 58.443 50.000 0.38 0.00 40.08 4.83
4361 9710 1.899814 TCAATGGTCAGAGCTACCGTT 59.100 47.619 5.87 5.87 45.15 4.44
4362 9711 2.301870 TCAATGGTCAGAGCTACCGTTT 59.698 45.455 8.61 0.00 42.34 3.60
4363 9712 3.074412 CAATGGTCAGAGCTACCGTTTT 58.926 45.455 8.61 0.00 42.34 2.43
4364 9713 2.450609 TGGTCAGAGCTACCGTTTTC 57.549 50.000 0.38 0.00 40.08 2.29
4365 9714 1.001633 TGGTCAGAGCTACCGTTTTCC 59.998 52.381 0.38 0.00 40.08 3.13
4366 9715 1.275573 GGTCAGAGCTACCGTTTTCCT 59.724 52.381 0.00 0.00 0.00 3.36
4367 9716 2.338500 GTCAGAGCTACCGTTTTCCTG 58.662 52.381 0.00 0.00 0.00 3.86
4368 9717 2.029290 GTCAGAGCTACCGTTTTCCTGA 60.029 50.000 0.00 0.00 0.00 3.86
4369 9718 2.631062 TCAGAGCTACCGTTTTCCTGAA 59.369 45.455 0.00 0.00 0.00 3.02
4370 9719 3.260884 TCAGAGCTACCGTTTTCCTGAAT 59.739 43.478 0.00 0.00 0.00 2.57
4371 9720 4.003648 CAGAGCTACCGTTTTCCTGAATT 58.996 43.478 0.00 0.00 0.00 2.17
4372 9721 4.455877 CAGAGCTACCGTTTTCCTGAATTT 59.544 41.667 0.00 0.00 0.00 1.82
4373 9722 5.048713 CAGAGCTACCGTTTTCCTGAATTTT 60.049 40.000 0.00 0.00 0.00 1.82
4374 9723 6.148811 CAGAGCTACCGTTTTCCTGAATTTTA 59.851 38.462 0.00 0.00 0.00 1.52
4375 9724 6.713450 AGAGCTACCGTTTTCCTGAATTTTAA 59.287 34.615 0.00 0.00 0.00 1.52
4376 9725 7.393515 AGAGCTACCGTTTTCCTGAATTTTAAT 59.606 33.333 0.00 0.00 0.00 1.40
4377 9726 7.312899 AGCTACCGTTTTCCTGAATTTTAATG 58.687 34.615 0.00 0.00 0.00 1.90
4378 9727 6.034577 GCTACCGTTTTCCTGAATTTTAATGC 59.965 38.462 0.00 0.00 0.00 3.56
4379 9728 5.848406 ACCGTTTTCCTGAATTTTAATGCA 58.152 33.333 0.00 0.00 0.00 3.96
4380 9729 6.463360 ACCGTTTTCCTGAATTTTAATGCAT 58.537 32.000 0.00 0.00 0.00 3.96
4381 9730 6.934083 ACCGTTTTCCTGAATTTTAATGCATT 59.066 30.769 17.56 17.56 0.00 3.56
4382 9731 7.117667 ACCGTTTTCCTGAATTTTAATGCATTC 59.882 33.333 16.86 1.36 0.00 2.67
4383 9732 7.412891 CCGTTTTCCTGAATTTTAATGCATTCC 60.413 37.037 16.86 0.52 0.00 3.01
4384 9733 7.331687 CGTTTTCCTGAATTTTAATGCATTCCT 59.668 33.333 16.86 0.00 0.00 3.36
4385 9734 9.651913 GTTTTCCTGAATTTTAATGCATTCCTA 57.348 29.630 16.86 2.38 0.00 2.94
4386 9735 9.874205 TTTTCCTGAATTTTAATGCATTCCTAG 57.126 29.630 16.86 6.07 0.00 3.02
4387 9736 8.821686 TTCCTGAATTTTAATGCATTCCTAGA 57.178 30.769 16.86 0.00 0.00 2.43
4388 9737 8.455903 TCCTGAATTTTAATGCATTCCTAGAG 57.544 34.615 16.86 4.73 0.00 2.43
4389 9738 8.274322 TCCTGAATTTTAATGCATTCCTAGAGA 58.726 33.333 16.86 0.82 0.00 3.10
4390 9739 8.906867 CCTGAATTTTAATGCATTCCTAGAGAA 58.093 33.333 16.86 0.00 39.32 2.87
4393 9742 9.242477 GAATTTTAATGCATTCCTAGAGAAAGC 57.758 33.333 16.86 11.75 46.89 3.51
4394 9743 7.944729 TTTTAATGCATTCCTAGAGAAAGCT 57.055 32.000 16.86 0.00 46.84 3.74
4395 9744 9.632638 ATTTTAATGCATTCCTAGAGAAAGCTA 57.367 29.630 16.86 0.00 46.84 3.32
4396 9745 9.461312 TTTTAATGCATTCCTAGAGAAAGCTAA 57.539 29.630 16.86 0.00 46.84 3.09
4397 9746 8.668510 TTAATGCATTCCTAGAGAAAGCTAAG 57.331 34.615 16.86 0.00 46.84 2.18
4398 9747 5.683876 TGCATTCCTAGAGAAAGCTAAGT 57.316 39.130 16.63 0.00 46.84 2.24
4399 9748 6.054860 TGCATTCCTAGAGAAAGCTAAGTT 57.945 37.500 16.63 0.00 46.84 2.66
4400 9749 5.877012 TGCATTCCTAGAGAAAGCTAAGTTG 59.123 40.000 16.63 4.01 46.84 3.16
4401 9750 6.109359 GCATTCCTAGAGAAAGCTAAGTTGA 58.891 40.000 11.51 0.00 44.08 3.18
4402 9751 6.595716 GCATTCCTAGAGAAAGCTAAGTTGAA 59.404 38.462 11.51 0.00 44.08 2.69
4403 9752 7.119846 GCATTCCTAGAGAAAGCTAAGTTGAAA 59.880 37.037 11.51 0.00 44.08 2.69
4404 9753 8.663911 CATTCCTAGAGAAAGCTAAGTTGAAAG 58.336 37.037 0.00 0.00 38.21 2.62
4405 9754 7.540474 TCCTAGAGAAAGCTAAGTTGAAAGA 57.460 36.000 0.00 0.00 0.00 2.52
4406 9755 8.140112 TCCTAGAGAAAGCTAAGTTGAAAGAT 57.860 34.615 0.00 0.00 0.00 2.40
4407 9756 8.037758 TCCTAGAGAAAGCTAAGTTGAAAGATG 58.962 37.037 0.00 0.00 0.00 2.90
4408 9757 8.037758 CCTAGAGAAAGCTAAGTTGAAAGATGA 58.962 37.037 0.00 0.00 0.00 2.92
4409 9758 9.598517 CTAGAGAAAGCTAAGTTGAAAGATGAT 57.401 33.333 0.00 0.00 0.00 2.45
4410 9759 8.266392 AGAGAAAGCTAAGTTGAAAGATGATG 57.734 34.615 0.00 0.00 0.00 3.07
4411 9760 7.336427 AGAGAAAGCTAAGTTGAAAGATGATGG 59.664 37.037 0.00 0.00 0.00 3.51
4412 9761 6.944862 AGAAAGCTAAGTTGAAAGATGATGGT 59.055 34.615 0.00 0.00 0.00 3.55
4413 9762 8.103305 AGAAAGCTAAGTTGAAAGATGATGGTA 58.897 33.333 0.00 0.00 0.00 3.25
4414 9763 7.856145 AAGCTAAGTTGAAAGATGATGGTAG 57.144 36.000 0.00 0.00 0.00 3.18
4415 9764 5.819901 AGCTAAGTTGAAAGATGATGGTAGC 59.180 40.000 0.00 0.00 0.00 3.58
4416 9765 5.586243 GCTAAGTTGAAAGATGATGGTAGCA 59.414 40.000 0.00 0.00 32.45 3.49
4417 9766 6.094048 GCTAAGTTGAAAGATGATGGTAGCAA 59.906 38.462 0.00 0.00 32.45 3.91
4418 9767 5.886960 AGTTGAAAGATGATGGTAGCAAC 57.113 39.130 0.00 0.00 35.78 4.17
4419 9768 5.564550 AGTTGAAAGATGATGGTAGCAACT 58.435 37.500 0.00 0.00 39.64 3.16
4420 9769 6.711277 AGTTGAAAGATGATGGTAGCAACTA 58.289 36.000 0.00 0.00 41.79 2.24
4421 9770 6.595716 AGTTGAAAGATGATGGTAGCAACTAC 59.404 38.462 0.00 0.00 41.79 2.73
4422 9771 6.048732 TGAAAGATGATGGTAGCAACTACA 57.951 37.500 0.00 0.00 38.58 2.74
4423 9772 5.874810 TGAAAGATGATGGTAGCAACTACAC 59.125 40.000 0.00 0.00 38.58 2.90
4424 9773 4.046938 AGATGATGGTAGCAACTACACG 57.953 45.455 0.00 0.00 38.58 4.49
4425 9774 2.665649 TGATGGTAGCAACTACACGG 57.334 50.000 0.00 0.00 38.58 4.94
4426 9775 2.172679 TGATGGTAGCAACTACACGGA 58.827 47.619 0.00 0.00 38.58 4.69
4427 9776 2.094390 TGATGGTAGCAACTACACGGAC 60.094 50.000 0.00 0.00 38.58 4.79
4428 9777 1.624336 TGGTAGCAACTACACGGACT 58.376 50.000 7.05 0.00 38.58 3.85
4429 9778 1.271379 TGGTAGCAACTACACGGACTG 59.729 52.381 7.05 0.00 38.58 3.51
4430 9779 1.403780 GGTAGCAACTACACGGACTGG 60.404 57.143 7.05 0.00 38.58 4.00
4431 9780 0.892755 TAGCAACTACACGGACTGGG 59.107 55.000 0.00 0.00 0.00 4.45
4432 9781 1.119574 AGCAACTACACGGACTGGGT 61.120 55.000 0.00 0.00 0.00 4.51
4433 9782 0.669625 GCAACTACACGGACTGGGTC 60.670 60.000 0.00 0.00 0.00 4.46
4442 9791 3.527434 GGACTGGGTCCGTAACTTG 57.473 57.895 0.74 0.00 43.14 3.16
4443 9792 0.971386 GGACTGGGTCCGTAACTTGA 59.029 55.000 0.74 0.00 43.14 3.02
4444 9793 1.067071 GGACTGGGTCCGTAACTTGAG 60.067 57.143 0.74 0.00 43.14 3.02
4445 9794 0.974383 ACTGGGTCCGTAACTTGAGG 59.026 55.000 0.00 0.00 0.00 3.86
4446 9795 1.263356 CTGGGTCCGTAACTTGAGGA 58.737 55.000 0.00 0.00 0.00 3.71
4447 9796 1.831736 CTGGGTCCGTAACTTGAGGAT 59.168 52.381 0.00 0.00 36.34 3.24
4448 9797 2.236395 CTGGGTCCGTAACTTGAGGATT 59.764 50.000 0.00 0.00 36.34 3.01
4449 9798 3.443052 TGGGTCCGTAACTTGAGGATTA 58.557 45.455 0.00 0.00 36.34 1.75
4450 9799 4.035112 TGGGTCCGTAACTTGAGGATTAT 58.965 43.478 0.00 0.00 36.34 1.28
4451 9800 4.100498 TGGGTCCGTAACTTGAGGATTATC 59.900 45.833 0.00 0.00 36.34 1.75
4452 9801 4.502777 GGGTCCGTAACTTGAGGATTATCC 60.503 50.000 2.40 2.40 36.34 2.59
4465 9814 5.894298 AGGATTATCCTCATTACTGCACA 57.106 39.130 8.15 0.00 45.66 4.57
4466 9815 5.862845 AGGATTATCCTCATTACTGCACAG 58.137 41.667 8.15 0.00 45.66 3.66
4467 9816 5.604231 AGGATTATCCTCATTACTGCACAGA 59.396 40.000 8.15 0.00 45.66 3.41
4468 9817 6.100279 AGGATTATCCTCATTACTGCACAGAA 59.900 38.462 8.15 0.00 45.66 3.02
4469 9818 6.426328 GGATTATCCTCATTACTGCACAGAAG 59.574 42.308 3.59 0.00 32.53 2.85
4470 9819 6.544928 TTATCCTCATTACTGCACAGAAGA 57.455 37.500 4.31 0.00 0.00 2.87
4471 9820 4.890158 TCCTCATTACTGCACAGAAGAA 57.110 40.909 4.31 0.00 0.00 2.52
4472 9821 5.426689 TCCTCATTACTGCACAGAAGAAT 57.573 39.130 4.31 0.00 0.00 2.40
4473 9822 5.809001 TCCTCATTACTGCACAGAAGAATT 58.191 37.500 4.31 0.00 0.00 2.17
4474 9823 6.946340 TCCTCATTACTGCACAGAAGAATTA 58.054 36.000 4.31 0.00 0.00 1.40
4475 9824 7.568349 TCCTCATTACTGCACAGAAGAATTAT 58.432 34.615 4.31 0.00 0.00 1.28
4476 9825 7.496920 TCCTCATTACTGCACAGAAGAATTATG 59.503 37.037 4.31 0.00 44.26 1.90
4488 9837 7.909777 CAGAAGAATTATGTCATTGATGCAC 57.090 36.000 0.00 0.00 31.50 4.57
4489 9838 6.916387 CAGAAGAATTATGTCATTGATGCACC 59.084 38.462 0.00 0.00 31.50 5.01
4490 9839 5.428496 AGAATTATGTCATTGATGCACCG 57.572 39.130 0.00 0.00 0.00 4.94
4491 9840 3.631145 ATTATGTCATTGATGCACCGC 57.369 42.857 0.00 0.00 0.00 5.68
4492 9841 2.330440 TATGTCATTGATGCACCGCT 57.670 45.000 0.00 0.00 0.00 5.52
4493 9842 2.330440 ATGTCATTGATGCACCGCTA 57.670 45.000 0.00 0.00 0.00 4.26
4494 9843 1.655484 TGTCATTGATGCACCGCTAG 58.345 50.000 0.00 0.00 0.00 3.42
4495 9844 0.940126 GTCATTGATGCACCGCTAGG 59.060 55.000 0.00 0.00 45.13 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 0.533755 GATTCAGGCTCCCATCACGG 60.534 60.000 0.00 0.00 0.00 4.94
18 19 0.178767 TGATTCAGGCTCCCATCACG 59.821 55.000 0.00 0.00 0.00 4.35
19 20 1.673168 GTGATTCAGGCTCCCATCAC 58.327 55.000 12.19 12.19 38.97 3.06
26 27 3.386078 TGACATAGAGGTGATTCAGGCTC 59.614 47.826 0.00 0.00 0.00 4.70
27 28 3.378512 TGACATAGAGGTGATTCAGGCT 58.621 45.455 0.00 0.00 0.00 4.58
35 36 1.745653 CGCAGACTGACATAGAGGTGA 59.254 52.381 6.65 0.00 0.00 4.02
68 69 5.474578 AAGACAAGTGATCAAGAGCTACA 57.525 39.130 0.00 0.00 0.00 2.74
80 81 5.538118 ACGTCATGACAATAAGACAAGTGA 58.462 37.500 24.93 0.00 0.00 3.41
83 84 5.171476 AGGACGTCATGACAATAAGACAAG 58.829 41.667 24.93 7.49 0.00 3.16
91 92 4.008074 ACTCAAAGGACGTCATGACAAT 57.992 40.909 24.93 12.72 0.00 2.71
95 96 3.162666 ACCTACTCAAAGGACGTCATGA 58.837 45.455 18.91 16.31 39.15 3.07
96 97 3.594603 ACCTACTCAAAGGACGTCATG 57.405 47.619 18.91 12.89 39.15 3.07
97 98 4.618920 AAACCTACTCAAAGGACGTCAT 57.381 40.909 18.91 7.60 39.15 3.06
128 129 1.872679 GTCAGATCGTCGGTTCGGC 60.873 63.158 0.00 0.00 0.00 5.54
154 155 2.292267 GGCAAGACATCGGTTCATGAT 58.708 47.619 0.00 0.00 0.00 2.45
156 157 0.734889 GGGCAAGACATCGGTTCATG 59.265 55.000 0.00 0.00 0.00 3.07
157 158 0.327924 TGGGCAAGACATCGGTTCAT 59.672 50.000 0.00 0.00 0.00 2.57
158 159 0.321564 CTGGGCAAGACATCGGTTCA 60.322 55.000 0.00 0.00 0.00 3.18
159 160 0.321653 ACTGGGCAAGACATCGGTTC 60.322 55.000 0.00 0.00 0.00 3.62
160 161 0.110486 AACTGGGCAAGACATCGGTT 59.890 50.000 0.00 0.00 0.00 4.44
161 162 0.110486 AAACTGGGCAAGACATCGGT 59.890 50.000 0.00 0.00 0.00 4.69
162 163 1.247567 AAAACTGGGCAAGACATCGG 58.752 50.000 0.00 0.00 0.00 4.18
163 164 4.475944 CTTAAAAACTGGGCAAGACATCG 58.524 43.478 0.00 0.00 0.00 3.84
164 165 4.280929 ACCTTAAAAACTGGGCAAGACATC 59.719 41.667 0.00 0.00 0.00 3.06
165 166 4.039124 CACCTTAAAAACTGGGCAAGACAT 59.961 41.667 0.00 0.00 0.00 3.06
166 167 3.383185 CACCTTAAAAACTGGGCAAGACA 59.617 43.478 0.00 0.00 0.00 3.41
167 168 3.383505 ACACCTTAAAAACTGGGCAAGAC 59.616 43.478 0.00 0.00 0.00 3.01
168 169 3.637769 ACACCTTAAAAACTGGGCAAGA 58.362 40.909 0.00 0.00 0.00 3.02
169 170 4.261867 GGTACACCTTAAAAACTGGGCAAG 60.262 45.833 0.00 0.00 0.00 4.01
176 177 4.694760 AGACCGGTACACCTTAAAAACT 57.305 40.909 7.34 0.00 0.00 2.66
179 180 6.591001 ACTAAAAGACCGGTACACCTTAAAA 58.409 36.000 7.34 0.00 0.00 1.52
229 231 3.429085 CATGCTTTACCTTCGATGCAAC 58.571 45.455 0.00 0.00 34.07 4.17
237 239 3.181486 GGCCTTTAGCATGCTTTACCTTC 60.181 47.826 28.02 9.27 46.50 3.46
242 246 4.037923 GCTATTGGCCTTTAGCATGCTTTA 59.962 41.667 28.02 11.98 46.50 1.85
245 249 1.959282 GCTATTGGCCTTTAGCATGCT 59.041 47.619 25.99 25.99 46.50 3.79
264 268 7.602265 ACACAAATTGTTATTATCCTTGTTGGC 59.398 33.333 0.00 0.00 33.09 4.52
329 333 9.979578 ACACATAATACTGAATGCTTTCAAAAA 57.020 25.926 15.12 5.26 41.22 1.94
351 355 9.295825 AGTTGACCTTAATCAAATGAATACACA 57.704 29.630 0.00 0.00 40.22 3.72
401 405 6.959311 CCGGTTCATTTATGACGAAAAGTAAG 59.041 38.462 0.00 0.00 36.36 2.34
403 407 5.163834 GCCGGTTCATTTATGACGAAAAGTA 60.164 40.000 1.90 0.00 36.36 2.24
404 408 4.379082 GCCGGTTCATTTATGACGAAAAGT 60.379 41.667 1.90 0.00 36.36 2.66
405 409 4.095610 GCCGGTTCATTTATGACGAAAAG 58.904 43.478 1.90 0.00 36.36 2.27
411 415 3.063997 CAGACTGCCGGTTCATTTATGAC 59.936 47.826 1.90 0.00 36.36 3.06
414 418 3.627395 TCAGACTGCCGGTTCATTTAT 57.373 42.857 1.90 0.00 0.00 1.40
415 419 3.055458 TGATCAGACTGCCGGTTCATTTA 60.055 43.478 1.90 0.00 0.00 1.40
432 436 9.145865 GTTTTTGGTTCAAGTTTTTACTGATCA 57.854 29.630 0.00 0.00 0.00 2.92
433 437 8.600625 GGTTTTTGGTTCAAGTTTTTACTGATC 58.399 33.333 0.00 0.00 0.00 2.92
444 448 3.317993 CCGATGAGGTTTTTGGTTCAAGT 59.682 43.478 0.00 0.00 34.51 3.16
503 507 4.864334 CAGGAGGTGATGCCGGGC 62.864 72.222 13.32 13.32 43.70 6.13
504 508 4.864334 GCAGGAGGTGATGCCGGG 62.864 72.222 2.18 0.00 43.70 5.73
505 509 3.411114 ATGCAGGAGGTGATGCCGG 62.411 63.158 0.00 0.00 41.85 6.13
507 511 0.534652 GAGATGCAGGAGGTGATGCC 60.535 60.000 0.00 0.00 41.85 4.40
508 512 0.534652 GGAGATGCAGGAGGTGATGC 60.535 60.000 0.00 0.00 42.86 3.91
509 513 0.835276 TGGAGATGCAGGAGGTGATG 59.165 55.000 0.00 0.00 0.00 3.07
510 514 0.835941 GTGGAGATGCAGGAGGTGAT 59.164 55.000 0.00 0.00 0.00 3.06
511 515 1.267574 GGTGGAGATGCAGGAGGTGA 61.268 60.000 0.00 0.00 0.00 4.02
513 517 2.362369 CGGTGGAGATGCAGGAGGT 61.362 63.158 0.00 0.00 0.00 3.85
514 518 2.503061 CGGTGGAGATGCAGGAGG 59.497 66.667 0.00 0.00 0.00 4.30
515 519 2.503061 CCGGTGGAGATGCAGGAG 59.497 66.667 0.00 0.00 0.00 3.69
516 520 3.785859 GCCGGTGGAGATGCAGGA 61.786 66.667 1.90 0.00 0.00 3.86
521 525 4.552365 ATGGCGCCGGTGGAGATG 62.552 66.667 23.90 0.00 0.00 2.90
522 526 4.552365 CATGGCGCCGGTGGAGAT 62.552 66.667 23.90 4.35 0.00 2.75
527 531 4.758251 TCAGACATGGCGCCGGTG 62.758 66.667 25.94 25.40 0.00 4.94
528 532 3.785859 ATCAGACATGGCGCCGGT 61.786 61.111 23.90 22.78 0.00 5.28
530 534 3.274586 CCATCAGACATGGCGCCG 61.275 66.667 23.90 11.34 31.75 6.46
536 540 0.812811 CCGTCCTGCCATCAGACATG 60.813 60.000 0.00 0.00 42.95 3.21
537 541 1.524002 CCGTCCTGCCATCAGACAT 59.476 57.895 0.00 0.00 42.95 3.06
538 542 2.981302 CCGTCCTGCCATCAGACA 59.019 61.111 0.00 0.00 42.95 3.41
539 543 2.512515 GCCGTCCTGCCATCAGAC 60.513 66.667 0.00 0.00 42.95 3.51
540 544 4.147449 CGCCGTCCTGCCATCAGA 62.147 66.667 0.00 0.00 42.95 3.27
578 739 2.183046 GGCGTGCTCCTGACTCTC 59.817 66.667 0.00 0.00 0.00 3.20
579 740 3.753434 CGGCGTGCTCCTGACTCT 61.753 66.667 0.00 0.00 0.00 3.24
596 757 3.456365 TCTCAGGAGCAGCTCGCC 61.456 66.667 16.47 4.03 44.04 5.54
598 759 1.139308 CTGTCTCAGGAGCAGCTCG 59.861 63.158 16.47 3.60 0.00 5.03
601 762 0.894141 TTCTCTGTCTCAGGAGCAGC 59.106 55.000 12.75 0.00 34.68 5.25
610 771 1.687996 CCTCCTCCCCTTCTCTGTCTC 60.688 61.905 0.00 0.00 0.00 3.36
631 792 3.229156 TACGTCAAGCCGGTGGTGG 62.229 63.158 1.90 0.00 0.00 4.61
657 818 2.372890 CCCATCTGAGGCTCCAGCA 61.373 63.158 12.86 0.00 44.36 4.41
677 838 2.355126 CGGTCCAGATCCGCATCG 60.355 66.667 0.00 0.00 41.48 3.84
708 869 5.895636 TCTCTTAGTCTCTTCTCTGCTTG 57.104 43.478 0.00 0.00 0.00 4.01
718 879 5.602145 CCCATCCATCTTTCTCTTAGTCTCT 59.398 44.000 0.00 0.00 0.00 3.10
719 880 5.365314 ACCCATCCATCTTTCTCTTAGTCTC 59.635 44.000 0.00 0.00 0.00 3.36
720 881 5.284582 ACCCATCCATCTTTCTCTTAGTCT 58.715 41.667 0.00 0.00 0.00 3.24
721 882 5.129485 TGACCCATCCATCTTTCTCTTAGTC 59.871 44.000 0.00 0.00 0.00 2.59
722 883 5.032846 TGACCCATCCATCTTTCTCTTAGT 58.967 41.667 0.00 0.00 0.00 2.24
723 884 5.620738 TGACCCATCCATCTTTCTCTTAG 57.379 43.478 0.00 0.00 0.00 2.18
724 885 5.163163 CCATGACCCATCCATCTTTCTCTTA 60.163 44.000 0.00 0.00 0.00 2.10
725 886 4.386088 CCATGACCCATCCATCTTTCTCTT 60.386 45.833 0.00 0.00 0.00 2.85
731 892 0.186873 GCCCATGACCCATCCATCTT 59.813 55.000 0.00 0.00 0.00 2.40
735 896 1.930133 ACTGCCCATGACCCATCCA 60.930 57.895 0.00 0.00 0.00 3.41
760 927 3.873952 CGATCCTTCTCCAAACCTGAATC 59.126 47.826 0.00 0.00 0.00 2.52
815 982 2.632544 GGGCGGGTACAAGTTTGGC 61.633 63.158 0.00 0.00 0.00 4.52
861 1032 5.611408 GGGGAGAGGGATAAAAAGAGGATTA 59.389 44.000 0.00 0.00 0.00 1.75
927 1102 2.766828 CAGGAACCCTAAGTCTACCCAG 59.233 54.545 0.00 0.00 29.64 4.45
936 1111 3.922171 AATCTGAGCAGGAACCCTAAG 57.078 47.619 0.00 0.00 29.64 2.18
937 1112 3.454812 GGTAATCTGAGCAGGAACCCTAA 59.545 47.826 0.00 0.00 29.64 2.69
986 1164 2.106131 CCATCCGGATGCGTCGAA 59.894 61.111 34.77 0.00 37.49 3.71
1008 1186 2.019984 CTGCTGGCAGGAGGAATTAAC 58.980 52.381 26.47 1.35 40.17 2.01
1027 1205 4.254709 TGAACTGCTGGTGCCGCT 62.255 61.111 0.00 0.00 38.71 5.52
1034 1212 0.595095 GCTTTCCTGTGAACTGCTGG 59.405 55.000 0.00 0.00 31.38 4.85
1047 1225 2.030805 GTCTTGTGTCCATGTGCTTTCC 60.031 50.000 0.00 0.00 0.00 3.13
1068 1246 0.251916 TTGGGATGTCTACCGCCTTG 59.748 55.000 0.00 0.00 0.00 3.61
1071 1249 0.250338 GGATTGGGATGTCTACCGCC 60.250 60.000 0.00 0.00 0.00 6.13
1072 1250 0.250338 GGGATTGGGATGTCTACCGC 60.250 60.000 0.00 0.00 0.00 5.68
1078 1295 1.490490 TGTAGCTGGGATTGGGATGTC 59.510 52.381 0.00 0.00 0.00 3.06
1108 1328 5.476091 TTTTTGTGGTCAGTTGGAACTTT 57.524 34.783 0.00 0.00 37.08 2.66
1129 1349 6.500751 TGTAATTCCTCTAGTCCCTGTTCTTT 59.499 38.462 0.00 0.00 0.00 2.52
1331 1551 4.142038 ACGCTCAAGGTAACCTTCAAAAT 58.858 39.130 0.00 0.00 42.67 1.82
1335 1555 1.689813 TGACGCTCAAGGTAACCTTCA 59.310 47.619 0.00 0.00 42.67 3.02
1336 1556 2.029290 TCTGACGCTCAAGGTAACCTTC 60.029 50.000 0.00 0.00 42.67 3.46
1338 1558 1.629043 TCTGACGCTCAAGGTAACCT 58.371 50.000 0.00 0.00 33.87 3.50
1342 1562 3.678056 AATGTTCTGACGCTCAAGGTA 57.322 42.857 0.00 0.00 0.00 3.08
1367 1587 8.470805 TGTAAAGCTAAGTTGTTTCATTTCCAA 58.529 29.630 0.00 0.00 0.00 3.53
1426 1654 4.357918 ACTCAGATACACAGGCAAAAGT 57.642 40.909 0.00 0.00 0.00 2.66
1427 1655 5.122396 GGTTACTCAGATACACAGGCAAAAG 59.878 44.000 0.00 0.00 0.00 2.27
1428 1656 5.001232 GGTTACTCAGATACACAGGCAAAA 58.999 41.667 0.00 0.00 0.00 2.44
1429 1657 4.286032 AGGTTACTCAGATACACAGGCAAA 59.714 41.667 0.00 0.00 0.00 3.68
1430 1658 3.838317 AGGTTACTCAGATACACAGGCAA 59.162 43.478 0.00 0.00 0.00 4.52
1431 1659 3.195610 CAGGTTACTCAGATACACAGGCA 59.804 47.826 0.00 0.00 0.00 4.75
1432 1660 3.447586 TCAGGTTACTCAGATACACAGGC 59.552 47.826 0.00 0.00 0.00 4.85
1433 1661 5.127845 ACATCAGGTTACTCAGATACACAGG 59.872 44.000 0.00 0.00 0.00 4.00
1449 1677 3.079578 CACAAATGCAGAGACATCAGGT 58.920 45.455 0.00 0.00 0.00 4.00
1450 1678 3.079578 ACACAAATGCAGAGACATCAGG 58.920 45.455 0.00 0.00 0.00 3.86
1521 1754 4.039609 CCTTTTTGCATCCTCCAGTTTCTT 59.960 41.667 0.00 0.00 0.00 2.52
1539 1772 2.039418 GCCCAACTCCTTGTTCCTTTT 58.961 47.619 0.00 0.00 36.63 2.27
1558 1791 6.106877 TCTTTTCATAAACATACAGAGCGC 57.893 37.500 0.00 0.00 0.00 5.92
1647 5143 0.038526 CGCTGGTAGTCGTCCAAACT 60.039 55.000 0.00 0.00 34.35 2.66
1667 5163 5.163405 ACCTACATCATCACGAAGCACTATT 60.163 40.000 0.00 0.00 0.00 1.73
1668 5164 4.342378 ACCTACATCATCACGAAGCACTAT 59.658 41.667 0.00 0.00 0.00 2.12
1701 5197 0.394565 ACTAATCGGCATGGAGGAGC 59.605 55.000 0.00 0.00 0.00 4.70
1732 5228 4.275689 ACAAATTTGATCAAGTCAGCACGA 59.724 37.500 24.64 0.00 38.29 4.35
1983 5588 3.640029 GGTACTCATCCCAATCTCCGTAA 59.360 47.826 0.00 0.00 0.00 3.18
2022 5627 6.093617 ACATATTCTAGATCTCCCCGGTAT 57.906 41.667 0.00 0.00 0.00 2.73
2027 5632 6.926630 ACTTGACATATTCTAGATCTCCCC 57.073 41.667 0.00 0.00 31.98 4.81
2070 5675 4.461081 TGCGTCATGCCTACCTTAATTTTT 59.539 37.500 0.00 0.00 45.60 1.94
2108 5715 8.627403 CAGATCAAATTAGCAGAACCAATACAT 58.373 33.333 0.00 0.00 0.00 2.29
2502 6123 3.108376 AGATAGAGACCAACCAAGTCCC 58.892 50.000 0.00 0.00 34.67 4.46
2603 6230 3.940209 AGCACAGAGAGAACAAGAGAG 57.060 47.619 0.00 0.00 0.00 3.20
2604 6231 3.192422 GCTAGCACAGAGAGAACAAGAGA 59.808 47.826 10.63 0.00 0.00 3.10
2655 6407 2.040278 TCACCTTAGCAGTCAAGGCAAT 59.960 45.455 1.04 0.00 45.50 3.56
2818 6572 5.603170 AATTAGTTGATGAGGCCAAATGG 57.397 39.130 5.01 0.00 38.53 3.16
2845 6599 9.812347 AAATATGGAAGCATCTGTGGATTAATA 57.188 29.630 0.00 0.00 0.00 0.98
2912 6666 3.741344 CGTAGGTATCATACTGCAAAGCC 59.259 47.826 0.00 0.00 0.00 4.35
2913 6667 4.209288 CACGTAGGTATCATACTGCAAAGC 59.791 45.833 0.00 0.00 0.00 3.51
2955 6709 5.761165 TCCAAACAAACCAAGCTTACTAC 57.239 39.130 0.00 0.00 0.00 2.73
2956 6710 5.475564 GGATCCAAACAAACCAAGCTTACTA 59.524 40.000 6.95 0.00 0.00 1.82
2957 6711 4.280929 GGATCCAAACAAACCAAGCTTACT 59.719 41.667 6.95 0.00 0.00 2.24
2984 6742 8.462016 GCATCAATGTAAAAGATTCTAACCAGT 58.538 33.333 0.00 0.00 0.00 4.00
3010 6768 4.024893 ACAGACAAGCAACAATGTTAGTCG 60.025 41.667 0.00 4.94 0.00 4.18
3157 6922 9.066892 TCACACTTATACTTCAGCAAAAGAAAT 57.933 29.630 5.23 2.00 0.00 2.17
3212 6978 7.121315 ACTTCTTTCTGGTGTAATCCAAATAGC 59.879 37.037 0.00 0.00 37.01 2.97
3274 7040 5.069501 AGATAGTCAAGTTTGGTCGTACC 57.930 43.478 0.00 0.00 39.22 3.34
3344 7118 7.312657 TGCAAGCAAAATTACATGACAAAAA 57.687 28.000 0.00 0.00 0.00 1.94
3406 7190 4.404654 GCGGCCTTTGCTTCACCG 62.405 66.667 0.00 0.00 46.50 4.94
3421 7205 0.672401 TCCCTCGGCTAACTTTTGCG 60.672 55.000 0.00 0.00 0.00 4.85
3426 7210 1.861982 TAGCTTCCCTCGGCTAACTT 58.138 50.000 0.00 0.00 37.98 2.66
3532 7325 1.478288 GCTCATGGCATAGCTTCCCTT 60.478 52.381 16.60 0.00 41.35 3.95
3554 7347 2.029918 GCACTGGAAACCAACCATTCTC 60.030 50.000 0.00 0.00 36.79 2.87
3571 7364 0.605589 GCGGGGTTAGAAACAGCACT 60.606 55.000 0.00 0.00 0.00 4.40
3635 7430 5.163364 CCCTGGATATATGAGCACATAGGAC 60.163 48.000 9.72 3.62 41.44 3.85
3662 7460 2.045926 ATGCTCCGAAGTGTGCCC 60.046 61.111 0.00 0.00 0.00 5.36
3663 7461 0.391130 TACATGCTCCGAAGTGTGCC 60.391 55.000 0.00 0.00 0.00 5.01
3698 7525 5.553952 CGCCGAAATAAGTTCTACGCTTTAG 60.554 44.000 0.00 0.00 33.70 1.85
3699 7526 4.266029 CGCCGAAATAAGTTCTACGCTTTA 59.734 41.667 0.00 0.00 33.70 1.85
3700 7527 3.061697 CGCCGAAATAAGTTCTACGCTTT 59.938 43.478 0.00 0.00 33.70 3.51
3718 7545 2.030717 AGCTCTGTTACTATCATCGCCG 60.031 50.000 0.00 0.00 0.00 6.46
3719 7546 3.651803 AGCTCTGTTACTATCATCGCC 57.348 47.619 0.00 0.00 0.00 5.54
3721 7548 9.549509 GTCTAAATAGCTCTGTTACTATCATCG 57.450 37.037 0.00 0.00 0.00 3.84
3833 9181 2.338257 CGCAATTTGGCAACCCGT 59.662 55.556 0.00 0.00 0.00 5.28
3835 9183 0.533978 AAACCGCAATTTGGCAACCC 60.534 50.000 0.00 0.00 0.00 4.11
3851 9199 3.231160 CCAAGTAAAATGCGGACGAAAC 58.769 45.455 0.00 0.00 0.00 2.78
3854 9202 0.800012 GCCAAGTAAAATGCGGACGA 59.200 50.000 0.00 0.00 0.00 4.20
3855 9203 0.179174 GGCCAAGTAAAATGCGGACG 60.179 55.000 0.00 0.00 0.00 4.79
3858 9206 0.887933 ACAGGCCAAGTAAAATGCGG 59.112 50.000 5.01 0.00 0.00 5.69
3859 9207 1.539388 TCACAGGCCAAGTAAAATGCG 59.461 47.619 5.01 0.00 0.00 4.73
3895 9243 6.779860 TCCTAAGAATTGAGTTAGCCAAGTT 58.220 36.000 0.00 0.00 0.00 2.66
3917 9265 7.420800 AGCAAATGATCTTATTCACGATTTCC 58.579 34.615 0.00 0.00 0.00 3.13
3928 9276 7.609146 TCTTGTTGTCAGAGCAAATGATCTTAT 59.391 33.333 0.00 0.00 38.98 1.73
3952 9300 2.103094 GGAAAAAGGCTGGTGCTTTTCT 59.897 45.455 16.60 0.00 45.68 2.52
3955 9303 0.758734 GGGAAAAAGGCTGGTGCTTT 59.241 50.000 0.00 0.00 40.32 3.51
4059 9408 9.893305 CGACAAGAAAAACATAATTTCCTACTT 57.107 29.630 0.00 0.00 37.47 2.24
4060 9409 9.280174 TCGACAAGAAAAACATAATTTCCTACT 57.720 29.630 0.00 0.00 37.47 2.57
4061 9410 9.887406 TTCGACAAGAAAAACATAATTTCCTAC 57.113 29.630 0.00 0.00 37.47 3.18
4063 9412 9.626045 GATTCGACAAGAAAAACATAATTTCCT 57.374 29.630 0.00 0.00 42.91 3.36
4064 9413 8.860128 GGATTCGACAAGAAAAACATAATTTCC 58.140 33.333 0.00 0.00 42.91 3.13
4065 9414 9.405587 TGGATTCGACAAGAAAAACATAATTTC 57.594 29.630 0.00 0.00 42.91 2.17
4066 9415 9.757227 TTGGATTCGACAAGAAAAACATAATTT 57.243 25.926 0.00 0.00 42.91 1.82
4067 9416 9.191995 GTTGGATTCGACAAGAAAAACATAATT 57.808 29.630 0.00 0.00 42.91 1.40
4068 9417 7.537306 CGTTGGATTCGACAAGAAAAACATAAT 59.463 33.333 0.00 0.00 42.91 1.28
4069 9418 6.853872 CGTTGGATTCGACAAGAAAAACATAA 59.146 34.615 0.00 0.00 42.91 1.90
4070 9419 6.203145 TCGTTGGATTCGACAAGAAAAACATA 59.797 34.615 0.00 0.00 42.91 2.29
4071 9420 5.008217 TCGTTGGATTCGACAAGAAAAACAT 59.992 36.000 0.00 0.00 42.91 2.71
4072 9421 4.333095 TCGTTGGATTCGACAAGAAAAACA 59.667 37.500 0.00 0.00 42.91 2.83
4073 9422 4.839796 TCGTTGGATTCGACAAGAAAAAC 58.160 39.130 0.00 0.00 42.91 2.43
4074 9423 4.024387 CCTCGTTGGATTCGACAAGAAAAA 60.024 41.667 0.00 0.00 42.91 1.94
4075 9424 3.496884 CCTCGTTGGATTCGACAAGAAAA 59.503 43.478 0.00 0.00 42.91 2.29
4076 9425 3.064207 CCTCGTTGGATTCGACAAGAAA 58.936 45.455 0.00 0.00 42.91 2.52
4077 9426 2.297880 TCCTCGTTGGATTCGACAAGAA 59.702 45.455 0.00 0.00 40.56 2.52
4078 9427 1.890489 TCCTCGTTGGATTCGACAAGA 59.110 47.619 0.00 0.00 40.56 3.02
4079 9428 2.263077 CTCCTCGTTGGATTCGACAAG 58.737 52.381 0.00 0.00 45.16 3.16
4080 9429 1.616865 ACTCCTCGTTGGATTCGACAA 59.383 47.619 0.00 0.00 45.16 3.18
4081 9430 1.254026 ACTCCTCGTTGGATTCGACA 58.746 50.000 0.00 0.00 45.16 4.35
4082 9431 2.365408 AACTCCTCGTTGGATTCGAC 57.635 50.000 0.00 0.00 45.16 4.20
4083 9432 4.491676 CTTTAACTCCTCGTTGGATTCGA 58.508 43.478 0.85 0.00 45.16 3.71
4084 9433 3.617263 CCTTTAACTCCTCGTTGGATTCG 59.383 47.826 0.85 0.00 45.16 3.34
4085 9434 4.576879 ACCTTTAACTCCTCGTTGGATTC 58.423 43.478 0.85 0.00 45.16 2.52
4086 9435 4.635699 ACCTTTAACTCCTCGTTGGATT 57.364 40.909 0.85 0.00 45.16 3.01
4087 9436 5.021458 TCTACCTTTAACTCCTCGTTGGAT 58.979 41.667 0.85 0.00 45.16 3.41
4088 9437 4.410099 TCTACCTTTAACTCCTCGTTGGA 58.590 43.478 0.00 0.58 43.86 3.53
4089 9438 4.796038 TCTACCTTTAACTCCTCGTTGG 57.204 45.455 0.00 0.00 37.05 3.77
4090 9439 5.535333 TGTTCTACCTTTAACTCCTCGTTG 58.465 41.667 0.00 0.00 37.05 4.10
4091 9440 5.537674 TCTGTTCTACCTTTAACTCCTCGTT 59.462 40.000 0.00 0.00 39.64 3.85
4092 9441 5.075493 TCTGTTCTACCTTTAACTCCTCGT 58.925 41.667 0.00 0.00 0.00 4.18
4093 9442 5.640189 TCTGTTCTACCTTTAACTCCTCG 57.360 43.478 0.00 0.00 0.00 4.63
4096 9445 9.327628 GGAAATATCTGTTCTACCTTTAACTCC 57.672 37.037 0.00 0.00 0.00 3.85
4099 9448 9.886132 TGAGGAAATATCTGTTCTACCTTTAAC 57.114 33.333 0.00 0.00 0.00 2.01
4102 9451 9.981460 ATTTGAGGAAATATCTGTTCTACCTTT 57.019 29.630 0.00 0.00 29.49 3.11
4103 9452 9.981460 AATTTGAGGAAATATCTGTTCTACCTT 57.019 29.630 0.00 0.00 31.18 3.50
4104 9453 9.620259 GAATTTGAGGAAATATCTGTTCTACCT 57.380 33.333 0.00 0.00 31.18 3.08
4105 9454 9.620259 AGAATTTGAGGAAATATCTGTTCTACC 57.380 33.333 0.00 0.00 31.18 3.18
4130 9479 7.644551 GTGTAGAGTTGTATCTTTGGTCGATAG 59.355 40.741 0.00 0.00 0.00 2.08
4131 9480 7.121611 TGTGTAGAGTTGTATCTTTGGTCGATA 59.878 37.037 0.00 0.00 0.00 2.92
4132 9481 6.071560 TGTGTAGAGTTGTATCTTTGGTCGAT 60.072 38.462 0.00 0.00 0.00 3.59
4133 9482 5.242171 TGTGTAGAGTTGTATCTTTGGTCGA 59.758 40.000 0.00 0.00 0.00 4.20
4134 9483 5.345202 GTGTGTAGAGTTGTATCTTTGGTCG 59.655 44.000 0.00 0.00 0.00 4.79
4135 9484 6.145696 GTGTGTGTAGAGTTGTATCTTTGGTC 59.854 42.308 0.00 0.00 0.00 4.02
4136 9485 5.989777 GTGTGTGTAGAGTTGTATCTTTGGT 59.010 40.000 0.00 0.00 0.00 3.67
4137 9486 6.223852 AGTGTGTGTAGAGTTGTATCTTTGG 58.776 40.000 0.00 0.00 0.00 3.28
4138 9487 7.715265 AAGTGTGTGTAGAGTTGTATCTTTG 57.285 36.000 0.00 0.00 0.00 2.77
4139 9488 9.257651 GTTAAGTGTGTGTAGAGTTGTATCTTT 57.742 33.333 0.00 0.00 0.00 2.52
4140 9489 8.639761 AGTTAAGTGTGTGTAGAGTTGTATCTT 58.360 33.333 0.00 0.00 0.00 2.40
4141 9490 8.179509 AGTTAAGTGTGTGTAGAGTTGTATCT 57.820 34.615 0.00 0.00 0.00 1.98
4142 9491 8.813643 AAGTTAAGTGTGTGTAGAGTTGTATC 57.186 34.615 0.00 0.00 0.00 2.24
4143 9492 9.257651 GAAAGTTAAGTGTGTGTAGAGTTGTAT 57.742 33.333 0.00 0.00 0.00 2.29
4144 9493 8.252417 TGAAAGTTAAGTGTGTGTAGAGTTGTA 58.748 33.333 0.00 0.00 0.00 2.41
4145 9494 7.101054 TGAAAGTTAAGTGTGTGTAGAGTTGT 58.899 34.615 0.00 0.00 0.00 3.32
4146 9495 7.534085 TGAAAGTTAAGTGTGTGTAGAGTTG 57.466 36.000 0.00 0.00 0.00 3.16
4147 9496 8.732746 AATGAAAGTTAAGTGTGTGTAGAGTT 57.267 30.769 0.00 0.00 0.00 3.01
4148 9497 8.732746 AAATGAAAGTTAAGTGTGTGTAGAGT 57.267 30.769 0.00 0.00 0.00 3.24
4151 9500 9.659830 GGTAAAATGAAAGTTAAGTGTGTGTAG 57.340 33.333 0.00 0.00 0.00 2.74
4152 9501 9.398538 AGGTAAAATGAAAGTTAAGTGTGTGTA 57.601 29.630 0.00 0.00 0.00 2.90
4153 9502 8.288689 AGGTAAAATGAAAGTTAAGTGTGTGT 57.711 30.769 0.00 0.00 0.00 3.72
4154 9503 9.878599 CTAGGTAAAATGAAAGTTAAGTGTGTG 57.121 33.333 0.00 0.00 0.00 3.82
4155 9504 9.841295 TCTAGGTAAAATGAAAGTTAAGTGTGT 57.159 29.630 0.00 0.00 0.00 3.72
4276 9625 4.461198 TCGCCACTGATCTACTCAATAGA 58.539 43.478 0.00 0.00 44.25 1.98
4277 9626 4.837896 TCGCCACTGATCTACTCAATAG 57.162 45.455 0.00 0.00 32.14 1.73
4278 9627 4.645136 ACTTCGCCACTGATCTACTCAATA 59.355 41.667 0.00 0.00 32.14 1.90
4279 9628 3.449018 ACTTCGCCACTGATCTACTCAAT 59.551 43.478 0.00 0.00 32.14 2.57
4280 9629 2.826128 ACTTCGCCACTGATCTACTCAA 59.174 45.455 0.00 0.00 32.14 3.02
4281 9630 2.447443 ACTTCGCCACTGATCTACTCA 58.553 47.619 0.00 0.00 0.00 3.41
4282 9631 4.839668 ATACTTCGCCACTGATCTACTC 57.160 45.455 0.00 0.00 0.00 2.59
4283 9632 4.645136 TCAATACTTCGCCACTGATCTACT 59.355 41.667 0.00 0.00 0.00 2.57
4284 9633 4.933330 TCAATACTTCGCCACTGATCTAC 58.067 43.478 0.00 0.00 0.00 2.59
4285 9634 4.645136 ACTCAATACTTCGCCACTGATCTA 59.355 41.667 0.00 0.00 0.00 1.98
4286 9635 3.449018 ACTCAATACTTCGCCACTGATCT 59.551 43.478 0.00 0.00 0.00 2.75
4287 9636 3.786635 ACTCAATACTTCGCCACTGATC 58.213 45.455 0.00 0.00 0.00 2.92
4288 9637 3.895232 ACTCAATACTTCGCCACTGAT 57.105 42.857 0.00 0.00 0.00 2.90
4289 9638 3.762288 ACTACTCAATACTTCGCCACTGA 59.238 43.478 0.00 0.00 0.00 3.41
4290 9639 4.106197 GACTACTCAATACTTCGCCACTG 58.894 47.826 0.00 0.00 0.00 3.66
4291 9640 4.017808 AGACTACTCAATACTTCGCCACT 58.982 43.478 0.00 0.00 0.00 4.00
4292 9641 4.373348 AGACTACTCAATACTTCGCCAC 57.627 45.455 0.00 0.00 0.00 5.01
4293 9642 6.710597 ATAAGACTACTCAATACTTCGCCA 57.289 37.500 0.00 0.00 0.00 5.69
4294 9643 7.873910 ACTATAAGACTACTCAATACTTCGCC 58.126 38.462 0.00 0.00 0.00 5.54
4295 9644 9.733219 AAACTATAAGACTACTCAATACTTCGC 57.267 33.333 0.00 0.00 0.00 4.70
4317 9666 9.836864 TGATCTACAACATAGATATGCAAAACT 57.163 29.630 0.00 0.00 37.19 2.66
4321 9670 9.223099 CCATTGATCTACAACATAGATATGCAA 57.777 33.333 0.00 0.00 41.52 4.08
4322 9671 8.377799 ACCATTGATCTACAACATAGATATGCA 58.622 33.333 0.00 0.00 41.52 3.96
4323 9672 8.783833 ACCATTGATCTACAACATAGATATGC 57.216 34.615 0.00 0.00 41.52 3.14
4324 9673 9.933723 TGACCATTGATCTACAACATAGATATG 57.066 33.333 0.00 0.00 41.52 1.78
4326 9675 9.367160 TCTGACCATTGATCTACAACATAGATA 57.633 33.333 0.00 0.00 41.52 1.98
4327 9676 8.255111 TCTGACCATTGATCTACAACATAGAT 57.745 34.615 0.00 0.00 41.52 1.98
4328 9677 7.660030 TCTGACCATTGATCTACAACATAGA 57.340 36.000 0.00 0.00 41.52 1.98
4329 9678 6.423302 GCTCTGACCATTGATCTACAACATAG 59.577 42.308 0.00 0.00 41.52 2.23
4330 9679 6.098838 AGCTCTGACCATTGATCTACAACATA 59.901 38.462 0.00 0.00 41.52 2.29
4331 9680 5.104610 AGCTCTGACCATTGATCTACAACAT 60.105 40.000 0.00 0.00 41.52 2.71
4332 9681 4.223700 AGCTCTGACCATTGATCTACAACA 59.776 41.667 0.00 0.00 41.52 3.33
4333 9682 4.764172 AGCTCTGACCATTGATCTACAAC 58.236 43.478 0.00 0.00 41.52 3.32
4334 9683 5.163405 GGTAGCTCTGACCATTGATCTACAA 60.163 44.000 0.00 0.00 42.95 2.41
4335 9684 4.342378 GGTAGCTCTGACCATTGATCTACA 59.658 45.833 0.00 0.00 35.10 2.74
4336 9685 4.557695 CGGTAGCTCTGACCATTGATCTAC 60.558 50.000 5.04 0.00 36.72 2.59
4337 9686 3.570125 CGGTAGCTCTGACCATTGATCTA 59.430 47.826 5.04 0.00 36.72 1.98
4338 9687 2.363680 CGGTAGCTCTGACCATTGATCT 59.636 50.000 5.04 0.00 36.72 2.75
4339 9688 2.101582 ACGGTAGCTCTGACCATTGATC 59.898 50.000 5.04 0.00 36.72 2.92
4340 9689 2.111384 ACGGTAGCTCTGACCATTGAT 58.889 47.619 5.04 0.00 36.72 2.57
4341 9690 1.557099 ACGGTAGCTCTGACCATTGA 58.443 50.000 5.04 0.00 36.72 2.57
4342 9691 2.386661 AACGGTAGCTCTGACCATTG 57.613 50.000 5.04 0.00 36.72 2.82
4343 9692 3.335579 GAAAACGGTAGCTCTGACCATT 58.664 45.455 5.04 0.00 36.72 3.16
4344 9693 2.354805 GGAAAACGGTAGCTCTGACCAT 60.355 50.000 5.04 0.00 36.72 3.55
4345 9694 1.001633 GGAAAACGGTAGCTCTGACCA 59.998 52.381 5.04 0.00 36.72 4.02
4346 9695 1.275573 AGGAAAACGGTAGCTCTGACC 59.724 52.381 0.00 0.00 0.00 4.02
4347 9696 2.029290 TCAGGAAAACGGTAGCTCTGAC 60.029 50.000 0.00 0.00 0.00 3.51
4348 9697 2.244695 TCAGGAAAACGGTAGCTCTGA 58.755 47.619 0.00 0.00 0.00 3.27
4349 9698 2.743636 TCAGGAAAACGGTAGCTCTG 57.256 50.000 0.00 0.00 0.00 3.35
4350 9699 3.983044 ATTCAGGAAAACGGTAGCTCT 57.017 42.857 0.00 0.00 0.00 4.09
4351 9700 5.372547 AAAATTCAGGAAAACGGTAGCTC 57.627 39.130 0.00 0.00 0.00 4.09
4352 9701 6.887626 TTAAAATTCAGGAAAACGGTAGCT 57.112 33.333 0.00 0.00 0.00 3.32
4353 9702 6.034577 GCATTAAAATTCAGGAAAACGGTAGC 59.965 38.462 0.00 0.00 0.00 3.58
4354 9703 7.087639 TGCATTAAAATTCAGGAAAACGGTAG 58.912 34.615 0.00 0.00 0.00 3.18
4355 9704 6.982852 TGCATTAAAATTCAGGAAAACGGTA 58.017 32.000 0.00 0.00 0.00 4.02
4356 9705 5.848406 TGCATTAAAATTCAGGAAAACGGT 58.152 33.333 0.00 0.00 0.00 4.83
4357 9706 6.966435 ATGCATTAAAATTCAGGAAAACGG 57.034 33.333 0.00 0.00 0.00 4.44
4358 9707 7.331687 AGGAATGCATTAAAATTCAGGAAAACG 59.668 33.333 12.97 0.00 35.00 3.60
4359 9708 8.552083 AGGAATGCATTAAAATTCAGGAAAAC 57.448 30.769 12.97 0.00 35.00 2.43
4360 9709 9.874205 CTAGGAATGCATTAAAATTCAGGAAAA 57.126 29.630 12.97 0.00 35.00 2.29
4361 9710 9.253832 TCTAGGAATGCATTAAAATTCAGGAAA 57.746 29.630 12.97 0.00 35.00 3.13
4362 9711 8.821686 TCTAGGAATGCATTAAAATTCAGGAA 57.178 30.769 12.97 0.00 35.00 3.36
4363 9712 8.274322 TCTCTAGGAATGCATTAAAATTCAGGA 58.726 33.333 12.97 0.70 35.00 3.86
4364 9713 8.455903 TCTCTAGGAATGCATTAAAATTCAGG 57.544 34.615 12.97 0.00 35.00 3.86
4378 9727 8.553459 TTTCAACTTAGCTTTCTCTAGGAATG 57.447 34.615 0.00 0.00 33.53 2.67
4379 9728 8.598041 TCTTTCAACTTAGCTTTCTCTAGGAAT 58.402 33.333 0.00 0.00 33.53 3.01
4380 9729 7.963532 TCTTTCAACTTAGCTTTCTCTAGGAA 58.036 34.615 0.00 0.00 0.00 3.36
4381 9730 7.540474 TCTTTCAACTTAGCTTTCTCTAGGA 57.460 36.000 0.00 0.00 0.00 2.94
4382 9731 8.037758 TCATCTTTCAACTTAGCTTTCTCTAGG 58.962 37.037 0.00 0.00 0.00 3.02
4383 9732 8.994429 TCATCTTTCAACTTAGCTTTCTCTAG 57.006 34.615 0.00 0.00 0.00 2.43
4384 9733 9.376075 CATCATCTTTCAACTTAGCTTTCTCTA 57.624 33.333 0.00 0.00 0.00 2.43
4385 9734 7.336427 CCATCATCTTTCAACTTAGCTTTCTCT 59.664 37.037 0.00 0.00 0.00 3.10
4386 9735 7.120432 ACCATCATCTTTCAACTTAGCTTTCTC 59.880 37.037 0.00 0.00 0.00 2.87
4387 9736 6.944862 ACCATCATCTTTCAACTTAGCTTTCT 59.055 34.615 0.00 0.00 0.00 2.52
4388 9737 7.150783 ACCATCATCTTTCAACTTAGCTTTC 57.849 36.000 0.00 0.00 0.00 2.62
4389 9738 7.148171 GCTACCATCATCTTTCAACTTAGCTTT 60.148 37.037 0.00 0.00 0.00 3.51
4390 9739 6.317391 GCTACCATCATCTTTCAACTTAGCTT 59.683 38.462 0.00 0.00 0.00 3.74
4391 9740 5.819901 GCTACCATCATCTTTCAACTTAGCT 59.180 40.000 0.00 0.00 0.00 3.32
4392 9741 5.586243 TGCTACCATCATCTTTCAACTTAGC 59.414 40.000 0.00 0.00 0.00 3.09
4393 9742 7.335422 AGTTGCTACCATCATCTTTCAACTTAG 59.665 37.037 0.00 0.00 39.58 2.18
4394 9743 7.168219 AGTTGCTACCATCATCTTTCAACTTA 58.832 34.615 0.00 0.00 39.58 2.24
4395 9744 6.006449 AGTTGCTACCATCATCTTTCAACTT 58.994 36.000 0.00 0.00 39.58 2.66
4396 9745 5.564550 AGTTGCTACCATCATCTTTCAACT 58.435 37.500 0.00 0.00 38.31 3.16
4397 9746 5.886960 AGTTGCTACCATCATCTTTCAAC 57.113 39.130 0.00 0.00 34.48 3.18
4398 9747 6.371548 GTGTAGTTGCTACCATCATCTTTCAA 59.628 38.462 4.14 0.00 36.24 2.69
4399 9748 5.874810 GTGTAGTTGCTACCATCATCTTTCA 59.125 40.000 4.14 0.00 36.24 2.69
4400 9749 5.005779 CGTGTAGTTGCTACCATCATCTTTC 59.994 44.000 4.14 0.00 36.24 2.62
4401 9750 4.870426 CGTGTAGTTGCTACCATCATCTTT 59.130 41.667 4.14 0.00 36.24 2.52
4402 9751 4.433615 CGTGTAGTTGCTACCATCATCTT 58.566 43.478 4.14 0.00 36.24 2.40
4403 9752 3.181475 CCGTGTAGTTGCTACCATCATCT 60.181 47.826 4.14 0.00 36.24 2.90
4404 9753 3.123804 CCGTGTAGTTGCTACCATCATC 58.876 50.000 4.14 0.00 36.24 2.92
4405 9754 2.764010 TCCGTGTAGTTGCTACCATCAT 59.236 45.455 4.14 0.00 36.24 2.45
4406 9755 2.094390 GTCCGTGTAGTTGCTACCATCA 60.094 50.000 4.14 0.00 36.24 3.07
4407 9756 2.165845 AGTCCGTGTAGTTGCTACCATC 59.834 50.000 4.14 0.00 36.24 3.51
4408 9757 2.094182 CAGTCCGTGTAGTTGCTACCAT 60.094 50.000 4.14 0.00 36.24 3.55
4409 9758 1.271379 CAGTCCGTGTAGTTGCTACCA 59.729 52.381 4.14 0.00 36.24 3.25
4410 9759 1.403780 CCAGTCCGTGTAGTTGCTACC 60.404 57.143 4.14 0.00 36.24 3.18
4411 9760 1.403780 CCCAGTCCGTGTAGTTGCTAC 60.404 57.143 0.00 0.00 37.46 3.58
4412 9761 0.892755 CCCAGTCCGTGTAGTTGCTA 59.107 55.000 0.00 0.00 0.00 3.49
4413 9762 1.119574 ACCCAGTCCGTGTAGTTGCT 61.120 55.000 0.00 0.00 0.00 3.91
4414 9763 0.669625 GACCCAGTCCGTGTAGTTGC 60.670 60.000 0.00 0.00 0.00 4.17
4415 9764 0.037605 GGACCCAGTCCGTGTAGTTG 60.038 60.000 0.00 0.00 43.14 3.16
4416 9765 2.359088 GGACCCAGTCCGTGTAGTT 58.641 57.895 0.00 0.00 43.14 2.24
4417 9766 4.108673 GGACCCAGTCCGTGTAGT 57.891 61.111 0.00 0.00 43.14 2.73
4425 9774 1.067071 CCTCAAGTTACGGACCCAGTC 60.067 57.143 0.00 0.00 0.00 3.51
4426 9775 0.974383 CCTCAAGTTACGGACCCAGT 59.026 55.000 0.00 0.00 0.00 4.00
4427 9776 1.263356 TCCTCAAGTTACGGACCCAG 58.737 55.000 0.00 0.00 0.00 4.45
4428 9777 1.946984 ATCCTCAAGTTACGGACCCA 58.053 50.000 0.00 0.00 0.00 4.51
4429 9778 4.502777 GGATAATCCTCAAGTTACGGACCC 60.503 50.000 0.00 0.00 32.53 4.46
4430 9779 4.344390 AGGATAATCCTCAAGTTACGGACC 59.656 45.833 0.00 0.00 45.66 4.46
4431 9780 5.532664 AGGATAATCCTCAAGTTACGGAC 57.467 43.478 0.00 0.00 45.66 4.79
4444 9793 5.858381 TCTGTGCAGTAATGAGGATAATCC 58.142 41.667 0.00 0.00 36.58 3.01
4445 9794 7.212976 TCTTCTGTGCAGTAATGAGGATAATC 58.787 38.462 0.00 0.00 0.00 1.75
4446 9795 7.129457 TCTTCTGTGCAGTAATGAGGATAAT 57.871 36.000 0.00 0.00 0.00 1.28
4447 9796 6.544928 TCTTCTGTGCAGTAATGAGGATAA 57.455 37.500 0.00 0.00 0.00 1.75
4448 9797 6.544928 TTCTTCTGTGCAGTAATGAGGATA 57.455 37.500 0.00 0.00 0.00 2.59
4449 9798 5.426689 TTCTTCTGTGCAGTAATGAGGAT 57.573 39.130 0.00 0.00 0.00 3.24
4450 9799 4.890158 TTCTTCTGTGCAGTAATGAGGA 57.110 40.909 0.00 0.00 0.00 3.71
4451 9800 7.281774 ACATAATTCTTCTGTGCAGTAATGAGG 59.718 37.037 0.00 0.00 0.00 3.86
4452 9801 8.206325 ACATAATTCTTCTGTGCAGTAATGAG 57.794 34.615 0.00 0.00 0.00 2.90
4453 9802 7.823799 TGACATAATTCTTCTGTGCAGTAATGA 59.176 33.333 0.00 0.00 0.00 2.57
4454 9803 7.977904 TGACATAATTCTTCTGTGCAGTAATG 58.022 34.615 0.00 0.00 0.00 1.90
4455 9804 8.743085 ATGACATAATTCTTCTGTGCAGTAAT 57.257 30.769 0.00 0.00 0.00 1.89
4456 9805 8.453320 CAATGACATAATTCTTCTGTGCAGTAA 58.547 33.333 0.00 0.00 0.00 2.24
4457 9806 7.823799 TCAATGACATAATTCTTCTGTGCAGTA 59.176 33.333 0.00 0.00 0.00 2.74
4458 9807 6.656270 TCAATGACATAATTCTTCTGTGCAGT 59.344 34.615 0.00 0.00 0.00 4.40
4459 9808 7.080353 TCAATGACATAATTCTTCTGTGCAG 57.920 36.000 0.00 0.00 0.00 4.41
4460 9809 7.477494 CATCAATGACATAATTCTTCTGTGCA 58.523 34.615 0.00 0.00 0.00 4.57
4461 9810 6.417044 GCATCAATGACATAATTCTTCTGTGC 59.583 38.462 0.00 0.00 0.00 4.57
4462 9811 7.431376 GTGCATCAATGACATAATTCTTCTGTG 59.569 37.037 0.00 0.00 0.00 3.66
4463 9812 7.415989 GGTGCATCAATGACATAATTCTTCTGT 60.416 37.037 0.00 0.00 0.00 3.41
4464 9813 6.916387 GGTGCATCAATGACATAATTCTTCTG 59.084 38.462 0.00 0.00 0.00 3.02
4465 9814 6.238566 CGGTGCATCAATGACATAATTCTTCT 60.239 38.462 0.00 0.00 0.00 2.85
4466 9815 5.911280 CGGTGCATCAATGACATAATTCTTC 59.089 40.000 0.00 0.00 0.00 2.87
4467 9816 5.734220 GCGGTGCATCAATGACATAATTCTT 60.734 40.000 0.00 0.00 0.00 2.52
4468 9817 4.261322 GCGGTGCATCAATGACATAATTCT 60.261 41.667 0.00 0.00 0.00 2.40
4469 9818 3.976942 GCGGTGCATCAATGACATAATTC 59.023 43.478 0.00 0.00 0.00 2.17
4470 9819 3.633525 AGCGGTGCATCAATGACATAATT 59.366 39.130 0.00 0.00 0.00 1.40
4471 9820 3.216800 AGCGGTGCATCAATGACATAAT 58.783 40.909 0.00 0.00 0.00 1.28
4472 9821 2.642427 AGCGGTGCATCAATGACATAA 58.358 42.857 0.00 0.00 0.00 1.90
4473 9822 2.330440 AGCGGTGCATCAATGACATA 57.670 45.000 0.00 0.00 0.00 2.29
4474 9823 2.216046 CTAGCGGTGCATCAATGACAT 58.784 47.619 0.00 0.00 0.00 3.06
4475 9824 1.655484 CTAGCGGTGCATCAATGACA 58.345 50.000 0.00 0.00 0.00 3.58
4476 9825 0.940126 CCTAGCGGTGCATCAATGAC 59.060 55.000 0.00 0.00 0.00 3.06
4477 9826 0.541392 ACCTAGCGGTGCATCAATGA 59.459 50.000 0.00 0.00 43.51 2.57
4478 9827 3.085208 ACCTAGCGGTGCATCAATG 57.915 52.632 0.00 0.00 43.51 2.82
4495 9844 3.822607 CCTGCAGTAGGTCTGTCAC 57.177 57.895 13.81 0.00 45.23 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.