Multiple sequence alignment - TraesCS3B01G453000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G453000 chr3B 100.000 3053 0 0 1 3053 694034752 694037804 0.000000e+00 5638.0
1 TraesCS3B01G453000 chr3B 74.805 770 102 51 1707 2459 694164689 694165383 2.330000e-66 263.0
2 TraesCS3B01G453000 chr3D 93.207 2208 82 30 1 2152 525736694 525738889 0.000000e+00 3184.0
3 TraesCS3B01G453000 chr3D 76.425 772 84 45 1707 2459 525741297 525741989 8.160000e-86 327.0
4 TraesCS3B01G453000 chr3D 87.065 201 18 6 1587 1780 525738374 525738573 1.420000e-53 220.0
5 TraesCS3B01G453000 chr3D 92.593 135 8 2 2487 2621 87925805 87925673 3.110000e-45 193.0
6 TraesCS3B01G453000 chr3D 94.444 72 4 0 2149 2220 525738991 525739062 8.950000e-21 111.0
7 TraesCS3B01G453000 chr3A 92.820 1741 75 21 1 1717 659948000 659949714 0.000000e+00 2477.0
8 TraesCS3B01G453000 chr3A 95.290 637 24 4 1773 2404 659949641 659950276 0.000000e+00 1005.0
9 TraesCS3B01G453000 chr3A 77.186 732 86 37 1526 2236 659952085 659952756 4.840000e-93 351.0
10 TraesCS3B01G453000 chr3A 83.682 239 20 7 1712 1947 659951848 659952070 1.110000e-49 207.0
11 TraesCS3B01G453000 chr3A 76.923 117 25 2 2760 2876 544376375 544376489 7.070000e-07 65.8
12 TraesCS3B01G453000 chr7B 93.333 135 9 0 2489 2623 60480435 60480301 1.860000e-47 200.0
13 TraesCS3B01G453000 chr6D 94.531 128 7 0 2493 2620 237348850 237348723 6.680000e-47 198.0
14 TraesCS3B01G453000 chr6D 93.750 128 8 0 2493 2620 81770384 81770257 3.110000e-45 193.0
15 TraesCS3B01G453000 chr4A 94.488 127 7 0 2494 2620 735001685 735001559 2.400000e-46 196.0
16 TraesCS3B01G453000 chr6B 89.610 154 14 2 2478 2631 15392079 15392230 8.640000e-46 195.0
17 TraesCS3B01G453000 chr2B 93.798 129 8 0 2493 2621 518742388 518742260 8.640000e-46 195.0
18 TraesCS3B01G453000 chr5B 92.537 134 10 0 2492 2625 571993473 571993606 3.110000e-45 193.0
19 TraesCS3B01G453000 chr5D 90.780 141 12 1 2481 2620 29496038 29496178 1.450000e-43 187.0
20 TraesCS3B01G453000 chr7A 84.058 69 10 1 2984 3052 610455963 610456030 7.070000e-07 65.8
21 TraesCS3B01G453000 chr7D 93.023 43 3 0 2989 3031 569412619 569412661 2.540000e-06 63.9
22 TraesCS3B01G453000 chr2D 78.947 95 12 4 2931 3018 79782369 79782462 1.180000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G453000 chr3B 694034752 694037804 3052 False 5638.0 5638 100.00000 1 3053 1 chr3B.!!$F1 3052
1 TraesCS3B01G453000 chr3B 694164689 694165383 694 False 263.0 263 74.80500 1707 2459 1 chr3B.!!$F2 752
2 TraesCS3B01G453000 chr3D 525736694 525741989 5295 False 960.5 3184 87.78525 1 2459 4 chr3D.!!$F1 2458
3 TraesCS3B01G453000 chr3A 659948000 659952756 4756 False 1010.0 2477 87.24450 1 2404 4 chr3A.!!$F2 2403

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
894 914 0.106149 AACGTTTCGAGCCCAACTCT 59.894 50.0 0.0 0.0 43.85 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2771 6245 0.112412 ACTTCGGCACCCCAAGAATT 59.888 50.0 0.0 0.0 0.0 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 88 5.862924 TGGAAAGAAAATCGAGATCACAC 57.137 39.130 0.00 0.00 0.00 3.82
94 97 6.811170 AGAAAATCGAGATCACACTCTCTTTC 59.189 38.462 0.00 0.00 39.65 2.62
121 124 5.574891 TTTAACAGCTCAAGCACAAAAGA 57.425 34.783 4.59 0.00 45.16 2.52
264 267 0.792640 GCACATGTCCGAGTTGTCAG 59.207 55.000 0.00 0.00 0.00 3.51
299 306 2.949177 AACCAGCACTGACCAATACA 57.051 45.000 0.00 0.00 0.00 2.29
301 308 2.715046 ACCAGCACTGACCAATACATG 58.285 47.619 0.00 0.00 0.00 3.21
375 383 2.573340 GAAATGCCGCCCCAACAG 59.427 61.111 0.00 0.00 0.00 3.16
435 443 1.197721 CCAACAGACTGAATTCGGCAC 59.802 52.381 14.40 8.81 0.00 5.01
607 616 3.745723 GGAAGCTCCCCTGTCAAAA 57.254 52.632 0.00 0.00 0.00 2.44
640 649 1.612950 CAGGGAGATCTCGGAGTGATG 59.387 57.143 16.46 3.83 41.12 3.07
703 712 1.103803 CGATCCCCGAAGAGAACAGA 58.896 55.000 0.00 0.00 41.76 3.41
707 716 1.544825 CCCCGAAGAGAACAGAGCCA 61.545 60.000 0.00 0.00 0.00 4.75
708 717 0.321671 CCCGAAGAGAACAGAGCCAA 59.678 55.000 0.00 0.00 0.00 4.52
828 847 2.806818 GACCTTTCCTCCGAAACAGAAC 59.193 50.000 0.00 0.00 34.28 3.01
894 914 0.106149 AACGTTTCGAGCCCAACTCT 59.894 50.000 0.00 0.00 43.85 3.24
983 1008 2.287608 GCAGAAACGAAAAGTTGGGAGG 60.288 50.000 0.00 0.00 43.37 4.30
993 1018 3.774842 AAGTTGGGAGGAGAGAGAGAT 57.225 47.619 0.00 0.00 0.00 2.75
999 1050 2.375174 GGGAGGAGAGAGAGATAGAGCA 59.625 54.545 0.00 0.00 0.00 4.26
1130 1181 2.045045 CAAGGCGGGGCTGATGAA 60.045 61.111 0.00 0.00 0.00 2.57
1131 1182 2.044946 AAGGCGGGGCTGATGAAC 60.045 61.111 0.00 0.00 0.00 3.18
1262 1313 1.152419 TGGTGGGTCAGTTCCTCGA 60.152 57.895 0.00 0.00 0.00 4.04
1285 1336 3.154473 CGAAGGAGGCCCGGATCA 61.154 66.667 0.73 0.00 37.58 2.92
1286 1337 2.506472 GAAGGAGGCCCGGATCAC 59.494 66.667 0.73 0.00 37.58 3.06
1296 1347 0.595053 CCCGGATCACGTTCGATCAG 60.595 60.000 15.43 11.92 43.07 2.90
1301 1352 0.179100 ATCACGTTCGATCAGGCCAG 60.179 55.000 5.01 0.00 0.00 4.85
1306 1357 0.175760 GTTCGATCAGGCCAGCTACA 59.824 55.000 5.01 0.00 0.00 2.74
1629 1680 0.676151 GGAAGAAGCAGCTGGTGGAG 60.676 60.000 20.97 0.00 0.00 3.86
1630 1681 0.676151 GAAGAAGCAGCTGGTGGAGG 60.676 60.000 20.97 0.00 0.00 4.30
1631 1682 1.130054 AAGAAGCAGCTGGTGGAGGA 61.130 55.000 20.97 0.00 0.00 3.71
1632 1683 0.913451 AGAAGCAGCTGGTGGAGGAT 60.913 55.000 20.97 1.43 0.00 3.24
1633 1684 0.463474 GAAGCAGCTGGTGGAGGATC 60.463 60.000 20.97 8.28 0.00 3.36
1892 1943 2.789845 TACATCAACGTGGGCGGGTG 62.790 60.000 0.00 0.00 43.45 4.61
1994 2045 2.330745 GGACTACGACGATCCGCC 59.669 66.667 0.00 0.00 0.00 6.13
2135 2196 1.194781 ATCGTGGGGCTCTTGTCACT 61.195 55.000 0.00 0.00 0.00 3.41
2279 2449 3.692101 TGCTAGCTGAAGTCAGAGAGTAC 59.308 47.826 17.23 0.00 46.59 2.73
2302 2472 9.026074 GTACTAGTACTAGTAACTGTAGAACCG 57.974 40.741 33.96 8.34 46.55 4.44
2303 2473 7.044798 ACTAGTACTAGTAACTGTAGAACCGG 58.955 42.308 29.96 0.00 43.98 5.28
2309 2479 4.655963 AGTAACTGTAGAACCGGACACTA 58.344 43.478 9.46 5.66 0.00 2.74
2358 2538 6.531240 CGATGAAATGTGGTTGGATAAAAAGG 59.469 38.462 0.00 0.00 0.00 3.11
2360 2540 5.070981 TGAAATGTGGTTGGATAAAAAGGCA 59.929 36.000 0.00 0.00 0.00 4.75
2361 2541 4.535526 ATGTGGTTGGATAAAAAGGCAC 57.464 40.909 0.00 0.00 0.00 5.01
2362 2542 2.630580 TGTGGTTGGATAAAAAGGCACC 59.369 45.455 0.00 0.00 0.00 5.01
2363 2543 1.889829 TGGTTGGATAAAAAGGCACCG 59.110 47.619 0.00 0.00 0.00 4.94
2364 2544 2.164338 GGTTGGATAAAAAGGCACCGA 58.836 47.619 0.00 0.00 0.00 4.69
2365 2545 2.163613 GGTTGGATAAAAAGGCACCGAG 59.836 50.000 0.00 0.00 0.00 4.63
2366 2546 2.122783 TGGATAAAAAGGCACCGAGG 57.877 50.000 0.00 0.00 0.00 4.63
2367 2547 0.738975 GGATAAAAAGGCACCGAGGC 59.261 55.000 0.00 0.00 44.61 4.70
2404 2584 3.884037 ACATCAAAACCTTCCTCTGGT 57.116 42.857 0.00 0.00 39.91 4.00
2412 5883 1.275573 ACCTTCCTCTGGTTACGCTTC 59.724 52.381 0.00 0.00 33.34 3.86
2419 5890 0.245539 CTGGTTACGCTTCGGAGGAA 59.754 55.000 0.00 0.00 0.00 3.36
2424 5895 3.739810 GGTTACGCTTCGGAGGAAATATC 59.260 47.826 0.00 0.00 0.00 1.63
2447 5921 4.114073 CAGTCTGCAAAACAATTGAGCAA 58.886 39.130 13.59 5.42 32.23 3.91
2455 5929 4.326504 AAACAATTGAGCAAGAGGTTGG 57.673 40.909 13.59 0.00 33.87 3.77
2459 5933 4.590222 ACAATTGAGCAAGAGGTTGGAAAT 59.410 37.500 13.59 0.00 33.87 2.17
2460 5934 5.774690 ACAATTGAGCAAGAGGTTGGAAATA 59.225 36.000 13.59 0.00 33.87 1.40
2461 5935 6.438425 ACAATTGAGCAAGAGGTTGGAAATAT 59.562 34.615 13.59 0.00 33.87 1.28
2462 5936 7.038799 ACAATTGAGCAAGAGGTTGGAAATATT 60.039 33.333 13.59 0.00 33.87 1.28
2463 5937 6.916360 TTGAGCAAGAGGTTGGAAATATTT 57.084 33.333 0.00 0.00 33.87 1.40
2464 5938 6.515272 TGAGCAAGAGGTTGGAAATATTTC 57.485 37.500 18.22 18.22 33.87 2.17
2465 5939 6.248433 TGAGCAAGAGGTTGGAAATATTTCT 58.752 36.000 23.85 7.28 37.35 2.52
2466 5940 6.721208 TGAGCAAGAGGTTGGAAATATTTCTT 59.279 34.615 23.85 8.87 37.35 2.52
2467 5941 6.928520 AGCAAGAGGTTGGAAATATTTCTTG 58.071 36.000 23.85 19.02 41.63 3.02
2468 5942 6.071165 AGCAAGAGGTTGGAAATATTTCTTGG 60.071 38.462 23.85 7.93 40.02 3.61
2469 5943 6.295292 GCAAGAGGTTGGAAATATTTCTTGGT 60.295 38.462 23.85 8.66 40.02 3.67
2470 5944 7.670364 CAAGAGGTTGGAAATATTTCTTGGTT 58.330 34.615 23.85 10.33 37.48 3.67
2471 5945 7.232118 AGAGGTTGGAAATATTTCTTGGTTG 57.768 36.000 23.85 0.00 37.35 3.77
2472 5946 7.010160 AGAGGTTGGAAATATTTCTTGGTTGA 58.990 34.615 23.85 4.14 37.35 3.18
2473 5947 6.993079 AGGTTGGAAATATTTCTTGGTTGAC 58.007 36.000 23.85 13.12 37.35 3.18
2474 5948 5.861787 GGTTGGAAATATTTCTTGGTTGACG 59.138 40.000 23.85 0.00 37.35 4.35
2475 5949 6.443792 GTTGGAAATATTTCTTGGTTGACGT 58.556 36.000 23.85 0.00 37.35 4.34
2476 5950 6.642707 TGGAAATATTTCTTGGTTGACGTT 57.357 33.333 23.85 0.00 37.35 3.99
2477 5951 7.045126 TGGAAATATTTCTTGGTTGACGTTT 57.955 32.000 23.85 0.00 37.35 3.60
2478 5952 7.493367 TGGAAATATTTCTTGGTTGACGTTTT 58.507 30.769 23.85 0.00 37.35 2.43
2479 5953 7.982354 TGGAAATATTTCTTGGTTGACGTTTTT 59.018 29.630 23.85 0.00 37.35 1.94
2480 5954 9.465985 GGAAATATTTCTTGGTTGACGTTTTTA 57.534 29.630 23.85 0.00 37.35 1.52
2483 5957 9.974980 AATATTTCTTGGTTGACGTTTTTATGT 57.025 25.926 0.00 0.00 0.00 2.29
2485 5959 8.791355 ATTTCTTGGTTGACGTTTTTATGTAC 57.209 30.769 0.00 0.00 0.00 2.90
2486 5960 7.556733 TTCTTGGTTGACGTTTTTATGTACT 57.443 32.000 0.00 0.00 0.00 2.73
2487 5961 7.181143 TCTTGGTTGACGTTTTTATGTACTC 57.819 36.000 0.00 0.00 0.00 2.59
2488 5962 5.927954 TGGTTGACGTTTTTATGTACTCC 57.072 39.130 0.00 0.00 0.00 3.85
2489 5963 5.613329 TGGTTGACGTTTTTATGTACTCCT 58.387 37.500 0.00 0.00 0.00 3.69
2490 5964 6.757237 TGGTTGACGTTTTTATGTACTCCTA 58.243 36.000 0.00 0.00 0.00 2.94
2491 5965 7.388437 TGGTTGACGTTTTTATGTACTCCTAT 58.612 34.615 0.00 0.00 0.00 2.57
2492 5966 8.530311 TGGTTGACGTTTTTATGTACTCCTATA 58.470 33.333 0.00 0.00 0.00 1.31
2493 5967 9.538508 GGTTGACGTTTTTATGTACTCCTATAT 57.461 33.333 0.00 0.00 0.00 0.86
2503 5977 9.458727 TTTATGTACTCCTATATACTTCCTCCG 57.541 37.037 0.00 0.00 0.00 4.63
2504 5978 6.445451 TGTACTCCTATATACTTCCTCCGT 57.555 41.667 0.00 0.00 0.00 4.69
2505 5979 6.471146 TGTACTCCTATATACTTCCTCCGTC 58.529 44.000 0.00 0.00 0.00 4.79
2506 5980 4.920999 ACTCCTATATACTTCCTCCGTCC 58.079 47.826 0.00 0.00 0.00 4.79
2507 5981 4.263860 ACTCCTATATACTTCCTCCGTCCC 60.264 50.000 0.00 0.00 0.00 4.46
2508 5982 3.659195 TCCTATATACTTCCTCCGTCCCA 59.341 47.826 0.00 0.00 0.00 4.37
2509 5983 4.106825 TCCTATATACTTCCTCCGTCCCAA 59.893 45.833 0.00 0.00 0.00 4.12
2510 5984 4.836736 CCTATATACTTCCTCCGTCCCAAA 59.163 45.833 0.00 0.00 0.00 3.28
2511 5985 5.306160 CCTATATACTTCCTCCGTCCCAAAA 59.694 44.000 0.00 0.00 0.00 2.44
2512 5986 5.906772 ATATACTTCCTCCGTCCCAAAAT 57.093 39.130 0.00 0.00 0.00 1.82
2513 5987 2.971901 ACTTCCTCCGTCCCAAAATT 57.028 45.000 0.00 0.00 0.00 1.82
2514 5988 2.791655 ACTTCCTCCGTCCCAAAATTC 58.208 47.619 0.00 0.00 0.00 2.17
2515 5989 2.375509 ACTTCCTCCGTCCCAAAATTCT 59.624 45.455 0.00 0.00 0.00 2.40
2516 5990 3.181433 ACTTCCTCCGTCCCAAAATTCTT 60.181 43.478 0.00 0.00 0.00 2.52
2517 5991 2.790433 TCCTCCGTCCCAAAATTCTTG 58.210 47.619 0.00 0.00 0.00 3.02
2518 5992 2.107552 TCCTCCGTCCCAAAATTCTTGT 59.892 45.455 0.00 0.00 0.00 3.16
2519 5993 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2520 5994 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2521 5995 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2522 5996 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2523 5997 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2524 5998 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2525 5999 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2526 6000 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2527 6001 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2528 6002 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
2529 6003 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2530 6004 8.923270 TCCCAAAATTCTTGTCTTAGATTTGTT 58.077 29.630 0.00 0.00 28.79 2.83
2531 6005 9.546428 CCCAAAATTCTTGTCTTAGATTTGTTT 57.454 29.630 0.00 0.00 28.79 2.83
2539 6013 9.582431 TCTTGTCTTAGATTTGTTTAGATACGG 57.418 33.333 0.00 0.00 0.00 4.02
2540 6014 9.582431 CTTGTCTTAGATTTGTTTAGATACGGA 57.418 33.333 0.00 0.00 0.00 4.69
2542 6016 9.529325 TGTCTTAGATTTGTTTAGATACGGATG 57.471 33.333 0.00 0.00 0.00 3.51
2543 6017 9.530633 GTCTTAGATTTGTTTAGATACGGATGT 57.469 33.333 0.00 0.00 0.00 3.06
2611 6085 7.611213 ATGTAAGACAAGAATTTTAGGACGG 57.389 36.000 0.00 0.00 0.00 4.79
2612 6086 6.761312 TGTAAGACAAGAATTTTAGGACGGA 58.239 36.000 0.00 0.00 0.00 4.69
2613 6087 6.872020 TGTAAGACAAGAATTTTAGGACGGAG 59.128 38.462 0.00 0.00 0.00 4.63
2614 6088 4.833390 AGACAAGAATTTTAGGACGGAGG 58.167 43.478 0.00 0.00 0.00 4.30
2615 6089 3.939592 GACAAGAATTTTAGGACGGAGGG 59.060 47.826 0.00 0.00 0.00 4.30
2616 6090 3.585732 ACAAGAATTTTAGGACGGAGGGA 59.414 43.478 0.00 0.00 0.00 4.20
2617 6091 4.192317 CAAGAATTTTAGGACGGAGGGAG 58.808 47.826 0.00 0.00 0.00 4.30
2618 6092 3.451890 AGAATTTTAGGACGGAGGGAGT 58.548 45.455 0.00 0.00 0.00 3.85
2619 6093 4.617593 AGAATTTTAGGACGGAGGGAGTA 58.382 43.478 0.00 0.00 0.00 2.59
2620 6094 4.405036 AGAATTTTAGGACGGAGGGAGTAC 59.595 45.833 0.00 0.00 0.00 2.73
2621 6095 2.149973 TTTAGGACGGAGGGAGTACC 57.850 55.000 0.00 0.00 40.67 3.34
2622 6096 1.002069 TTAGGACGGAGGGAGTACCA 58.998 55.000 0.00 0.00 43.89 3.25
2623 6097 1.002069 TAGGACGGAGGGAGTACCAA 58.998 55.000 0.00 0.00 43.89 3.67
2624 6098 0.115745 AGGACGGAGGGAGTACCAAA 59.884 55.000 0.00 0.00 43.89 3.28
2625 6099 0.978907 GGACGGAGGGAGTACCAAAA 59.021 55.000 0.00 0.00 43.89 2.44
2626 6100 1.338484 GGACGGAGGGAGTACCAAAAC 60.338 57.143 0.00 0.00 43.89 2.43
2627 6101 0.689055 ACGGAGGGAGTACCAAAACC 59.311 55.000 0.00 0.00 43.89 3.27
2628 6102 0.688487 CGGAGGGAGTACCAAAACCA 59.312 55.000 0.00 0.00 43.89 3.67
2629 6103 1.072648 CGGAGGGAGTACCAAAACCAA 59.927 52.381 0.00 0.00 43.89 3.67
2630 6104 2.487625 CGGAGGGAGTACCAAAACCAAA 60.488 50.000 0.00 0.00 43.89 3.28
2631 6105 3.154710 GGAGGGAGTACCAAAACCAAAG 58.845 50.000 0.00 0.00 43.89 2.77
2632 6106 2.557056 GAGGGAGTACCAAAACCAAAGC 59.443 50.000 0.00 0.00 43.89 3.51
2633 6107 2.091555 AGGGAGTACCAAAACCAAAGCA 60.092 45.455 0.00 0.00 43.89 3.91
2634 6108 2.035449 GGGAGTACCAAAACCAAAGCAC 59.965 50.000 0.00 0.00 39.85 4.40
2635 6109 2.691011 GGAGTACCAAAACCAAAGCACA 59.309 45.455 0.00 0.00 35.97 4.57
2636 6110 3.320826 GGAGTACCAAAACCAAAGCACAT 59.679 43.478 0.00 0.00 35.97 3.21
2637 6111 4.521256 GGAGTACCAAAACCAAAGCACATA 59.479 41.667 0.00 0.00 35.97 2.29
2638 6112 5.447624 AGTACCAAAACCAAAGCACATAC 57.552 39.130 0.00 0.00 0.00 2.39
2639 6113 3.744238 ACCAAAACCAAAGCACATACC 57.256 42.857 0.00 0.00 0.00 2.73
2640 6114 3.034635 ACCAAAACCAAAGCACATACCA 58.965 40.909 0.00 0.00 0.00 3.25
2641 6115 3.069443 ACCAAAACCAAAGCACATACCAG 59.931 43.478 0.00 0.00 0.00 4.00
2642 6116 3.069443 CCAAAACCAAAGCACATACCAGT 59.931 43.478 0.00 0.00 0.00 4.00
2643 6117 4.279671 CCAAAACCAAAGCACATACCAGTA 59.720 41.667 0.00 0.00 0.00 2.74
2644 6118 5.047377 CCAAAACCAAAGCACATACCAGTAT 60.047 40.000 0.00 0.00 0.00 2.12
2645 6119 6.454795 CAAAACCAAAGCACATACCAGTATT 58.545 36.000 0.00 0.00 0.00 1.89
2646 6120 6.664428 AAACCAAAGCACATACCAGTATTT 57.336 33.333 0.00 0.00 0.00 1.40
2647 6121 6.664428 AACCAAAGCACATACCAGTATTTT 57.336 33.333 0.00 0.00 0.00 1.82
2648 6122 6.024552 ACCAAAGCACATACCAGTATTTTG 57.975 37.500 6.01 6.01 0.00 2.44
2649 6123 5.047377 ACCAAAGCACATACCAGTATTTTGG 60.047 40.000 20.30 20.30 43.08 3.28
2650 6124 4.718940 AAGCACATACCAGTATTTTGGC 57.281 40.909 0.00 0.00 42.18 4.52
2651 6125 3.023832 AGCACATACCAGTATTTTGGCC 58.976 45.455 0.00 0.00 42.18 5.36
2652 6126 2.757868 GCACATACCAGTATTTTGGCCA 59.242 45.455 0.00 0.00 42.18 5.36
2653 6127 3.384467 GCACATACCAGTATTTTGGCCAT 59.616 43.478 6.09 0.00 42.18 4.40
2654 6128 4.737352 GCACATACCAGTATTTTGGCCATG 60.737 45.833 6.09 0.00 42.18 3.66
2655 6129 3.384467 ACATACCAGTATTTTGGCCATGC 59.616 43.478 6.09 0.00 42.18 4.06
2656 6130 2.236489 ACCAGTATTTTGGCCATGCT 57.764 45.000 6.09 0.00 42.18 3.79
2657 6131 2.102578 ACCAGTATTTTGGCCATGCTC 58.897 47.619 6.09 0.00 42.18 4.26
2658 6132 2.101783 CCAGTATTTTGGCCATGCTCA 58.898 47.619 6.09 0.00 0.00 4.26
2659 6133 2.100252 CCAGTATTTTGGCCATGCTCAG 59.900 50.000 6.09 0.00 0.00 3.35
2660 6134 3.018856 CAGTATTTTGGCCATGCTCAGA 58.981 45.455 6.09 0.00 0.00 3.27
2661 6135 3.444742 CAGTATTTTGGCCATGCTCAGAA 59.555 43.478 6.09 0.00 0.00 3.02
2662 6136 4.098960 CAGTATTTTGGCCATGCTCAGAAT 59.901 41.667 6.09 1.62 0.00 2.40
2663 6137 4.713321 AGTATTTTGGCCATGCTCAGAATT 59.287 37.500 6.09 0.00 0.00 2.17
2664 6138 4.563140 ATTTTGGCCATGCTCAGAATTT 57.437 36.364 6.09 0.00 0.00 1.82
2665 6139 4.354893 TTTTGGCCATGCTCAGAATTTT 57.645 36.364 6.09 0.00 0.00 1.82
2666 6140 3.322211 TTGGCCATGCTCAGAATTTTG 57.678 42.857 6.09 0.00 0.00 2.44
2667 6141 2.250031 TGGCCATGCTCAGAATTTTGT 58.750 42.857 0.00 0.00 0.00 2.83
2668 6142 2.231964 TGGCCATGCTCAGAATTTTGTC 59.768 45.455 0.00 0.00 0.00 3.18
2669 6143 2.494870 GGCCATGCTCAGAATTTTGTCT 59.505 45.455 0.00 0.00 0.00 3.41
2670 6144 3.428589 GGCCATGCTCAGAATTTTGTCTC 60.429 47.826 0.00 0.00 0.00 3.36
2671 6145 3.442977 GCCATGCTCAGAATTTTGTCTCT 59.557 43.478 0.00 0.00 0.00 3.10
2672 6146 4.082354 GCCATGCTCAGAATTTTGTCTCTT 60.082 41.667 0.00 0.00 0.00 2.85
2673 6147 5.399858 CCATGCTCAGAATTTTGTCTCTTG 58.600 41.667 0.00 0.00 0.00 3.02
2674 6148 5.048224 CCATGCTCAGAATTTTGTCTCTTGT 60.048 40.000 0.00 0.00 0.00 3.16
2675 6149 6.444633 CATGCTCAGAATTTTGTCTCTTGTT 58.555 36.000 0.00 0.00 0.00 2.83
2676 6150 6.455360 TGCTCAGAATTTTGTCTCTTGTTT 57.545 33.333 0.00 0.00 0.00 2.83
2677 6151 6.267817 TGCTCAGAATTTTGTCTCTTGTTTG 58.732 36.000 0.00 0.00 0.00 2.93
2678 6152 5.689068 GCTCAGAATTTTGTCTCTTGTTTGG 59.311 40.000 0.00 0.00 0.00 3.28
2679 6153 6.460123 GCTCAGAATTTTGTCTCTTGTTTGGA 60.460 38.462 0.00 0.00 0.00 3.53
2680 6154 7.587037 TCAGAATTTTGTCTCTTGTTTGGAT 57.413 32.000 0.00 0.00 0.00 3.41
2681 6155 8.010733 TCAGAATTTTGTCTCTTGTTTGGATT 57.989 30.769 0.00 0.00 0.00 3.01
2682 6156 8.477256 TCAGAATTTTGTCTCTTGTTTGGATTT 58.523 29.630 0.00 0.00 0.00 2.17
2683 6157 9.101655 CAGAATTTTGTCTCTTGTTTGGATTTT 57.898 29.630 0.00 0.00 0.00 1.82
2684 6158 9.101655 AGAATTTTGTCTCTTGTTTGGATTTTG 57.898 29.630 0.00 0.00 0.00 2.44
2685 6159 9.097257 GAATTTTGTCTCTTGTTTGGATTTTGA 57.903 29.630 0.00 0.00 0.00 2.69
2686 6160 7.826260 TTTTGTCTCTTGTTTGGATTTTGAC 57.174 32.000 0.00 0.00 0.00 3.18
2687 6161 6.522625 TTGTCTCTTGTTTGGATTTTGACA 57.477 33.333 0.00 0.00 0.00 3.58
2688 6162 6.522625 TGTCTCTTGTTTGGATTTTGACAA 57.477 33.333 0.00 0.00 0.00 3.18
2689 6163 7.111247 TGTCTCTTGTTTGGATTTTGACAAT 57.889 32.000 0.00 0.00 32.23 2.71
2690 6164 7.555087 TGTCTCTTGTTTGGATTTTGACAATT 58.445 30.769 0.00 0.00 32.23 2.32
2691 6165 8.040132 TGTCTCTTGTTTGGATTTTGACAATTT 58.960 29.630 0.00 0.00 32.23 1.82
2692 6166 8.882736 GTCTCTTGTTTGGATTTTGACAATTTT 58.117 29.630 0.00 0.00 32.23 1.82
2693 6167 9.447157 TCTCTTGTTTGGATTTTGACAATTTTT 57.553 25.926 0.00 0.00 32.23 1.94
2726 6200 6.732896 TTTTTACAAAATGGCCTAAGTCCA 57.267 33.333 3.32 0.00 38.09 4.02
2727 6201 6.926630 TTTTACAAAATGGCCTAAGTCCAT 57.073 33.333 3.32 0.00 45.70 3.41
2728 6202 8.423906 TTTTTACAAAATGGCCTAAGTCCATA 57.576 30.769 3.32 0.00 43.13 2.74
2729 6203 8.602472 TTTTACAAAATGGCCTAAGTCCATAT 57.398 30.769 3.32 0.00 43.13 1.78
2730 6204 9.702253 TTTTACAAAATGGCCTAAGTCCATATA 57.298 29.630 3.32 0.00 43.13 0.86
2731 6205 9.875708 TTTACAAAATGGCCTAAGTCCATATAT 57.124 29.630 3.32 0.00 43.13 0.86
2732 6206 9.515226 TTACAAAATGGCCTAAGTCCATATATC 57.485 33.333 3.32 0.00 43.13 1.63
2733 6207 7.526041 ACAAAATGGCCTAAGTCCATATATCA 58.474 34.615 3.32 0.00 43.13 2.15
2734 6208 8.004215 ACAAAATGGCCTAAGTCCATATATCAA 58.996 33.333 3.32 0.00 43.13 2.57
2735 6209 8.517878 CAAAATGGCCTAAGTCCATATATCAAG 58.482 37.037 3.32 0.00 43.13 3.02
2736 6210 6.959606 ATGGCCTAAGTCCATATATCAAGT 57.040 37.500 3.32 0.00 42.20 3.16
2737 6211 8.449423 AATGGCCTAAGTCCATATATCAAGTA 57.551 34.615 3.32 0.00 43.13 2.24
2738 6212 8.629821 ATGGCCTAAGTCCATATATCAAGTAT 57.370 34.615 3.32 0.00 42.20 2.12
2739 6213 8.079211 TGGCCTAAGTCCATATATCAAGTATC 57.921 38.462 3.32 0.00 0.00 2.24
2740 6214 7.678171 TGGCCTAAGTCCATATATCAAGTATCA 59.322 37.037 3.32 0.00 0.00 2.15
2741 6215 7.982354 GGCCTAAGTCCATATATCAAGTATCAC 59.018 40.741 0.00 0.00 0.00 3.06
2742 6216 8.531982 GCCTAAGTCCATATATCAAGTATCACA 58.468 37.037 0.00 0.00 0.00 3.58
2746 6220 9.935241 AAGTCCATATATCAAGTATCACATGTC 57.065 33.333 0.00 0.00 0.00 3.06
2747 6221 8.535335 AGTCCATATATCAAGTATCACATGTCC 58.465 37.037 0.00 0.00 0.00 4.02
2748 6222 8.535335 GTCCATATATCAAGTATCACATGTCCT 58.465 37.037 0.00 0.00 0.00 3.85
2749 6223 9.104713 TCCATATATCAAGTATCACATGTCCTT 57.895 33.333 0.00 0.00 0.00 3.36
2757 6231 9.952030 TCAAGTATCACATGTCCTTATTACAAA 57.048 29.630 0.00 0.00 0.00 2.83
2784 6258 8.560355 AAAATGTATTAAAATTCTTGGGGTGC 57.440 30.769 0.00 0.00 0.00 5.01
2785 6259 5.669164 TGTATTAAAATTCTTGGGGTGCC 57.331 39.130 0.00 0.00 0.00 5.01
2786 6260 3.885724 ATTAAAATTCTTGGGGTGCCG 57.114 42.857 0.00 0.00 0.00 5.69
2787 6261 2.588464 TAAAATTCTTGGGGTGCCGA 57.412 45.000 0.00 0.00 0.00 5.54
2788 6262 1.710816 AAAATTCTTGGGGTGCCGAA 58.289 45.000 0.00 0.00 0.00 4.30
2789 6263 1.256812 AAATTCTTGGGGTGCCGAAG 58.743 50.000 0.00 0.00 40.05 3.79
2790 6264 0.112412 AATTCTTGGGGTGCCGAAGT 59.888 50.000 0.00 0.00 39.74 3.01
2791 6265 0.322546 ATTCTTGGGGTGCCGAAGTC 60.323 55.000 0.00 0.00 39.74 3.01
2792 6266 1.415672 TTCTTGGGGTGCCGAAGTCT 61.416 55.000 0.00 0.00 39.74 3.24
2793 6267 1.073199 CTTGGGGTGCCGAAGTCTT 59.927 57.895 0.00 0.00 35.17 3.01
2794 6268 0.955919 CTTGGGGTGCCGAAGTCTTC 60.956 60.000 2.18 2.18 35.17 2.87
2795 6269 1.415672 TTGGGGTGCCGAAGTCTTCT 61.416 55.000 10.81 0.00 0.00 2.85
2796 6270 1.375326 GGGGTGCCGAAGTCTTCTT 59.625 57.895 10.81 0.00 36.51 2.52
2797 6271 0.673956 GGGGTGCCGAAGTCTTCTTC 60.674 60.000 10.81 3.04 44.55 2.87
2798 6272 0.321996 GGGTGCCGAAGTCTTCTTCT 59.678 55.000 10.81 0.00 45.47 2.85
2799 6273 1.270893 GGGTGCCGAAGTCTTCTTCTT 60.271 52.381 10.81 0.00 45.47 2.52
2800 6274 2.070028 GGTGCCGAAGTCTTCTTCTTC 58.930 52.381 10.81 0.00 45.47 2.87
2801 6275 2.070028 GTGCCGAAGTCTTCTTCTTCC 58.930 52.381 10.81 0.00 45.47 3.46
2802 6276 1.971357 TGCCGAAGTCTTCTTCTTCCT 59.029 47.619 10.81 0.00 45.47 3.36
2803 6277 2.028930 TGCCGAAGTCTTCTTCTTCCTC 60.029 50.000 10.81 0.00 45.47 3.71
2804 6278 2.675603 GCCGAAGTCTTCTTCTTCCTCC 60.676 54.545 10.81 0.00 45.47 4.30
2805 6279 2.563179 CCGAAGTCTTCTTCTTCCTCCA 59.437 50.000 10.81 0.00 45.47 3.86
2806 6280 3.196685 CCGAAGTCTTCTTCTTCCTCCAT 59.803 47.826 10.81 0.00 45.47 3.41
2807 6281 4.429108 CGAAGTCTTCTTCTTCCTCCATC 58.571 47.826 10.81 0.00 45.47 3.51
2808 6282 4.679372 CGAAGTCTTCTTCTTCCTCCATCC 60.679 50.000 10.81 0.00 45.47 3.51
2809 6283 3.796111 AGTCTTCTTCTTCCTCCATCCA 58.204 45.455 0.00 0.00 0.00 3.41
2810 6284 4.369872 AGTCTTCTTCTTCCTCCATCCAT 58.630 43.478 0.00 0.00 0.00 3.41
2811 6285 4.408596 AGTCTTCTTCTTCCTCCATCCATC 59.591 45.833 0.00 0.00 0.00 3.51
2812 6286 3.386078 TCTTCTTCTTCCTCCATCCATCG 59.614 47.826 0.00 0.00 0.00 3.84
2813 6287 2.752030 TCTTCTTCCTCCATCCATCGT 58.248 47.619 0.00 0.00 0.00 3.73
2814 6288 2.695666 TCTTCTTCCTCCATCCATCGTC 59.304 50.000 0.00 0.00 0.00 4.20
2815 6289 2.159179 TCTTCCTCCATCCATCGTCA 57.841 50.000 0.00 0.00 0.00 4.35
2816 6290 2.034878 TCTTCCTCCATCCATCGTCAG 58.965 52.381 0.00 0.00 0.00 3.51
2817 6291 0.465705 TTCCTCCATCCATCGTCAGC 59.534 55.000 0.00 0.00 0.00 4.26
2818 6292 0.687427 TCCTCCATCCATCGTCAGCA 60.687 55.000 0.00 0.00 0.00 4.41
2819 6293 0.178767 CCTCCATCCATCGTCAGCAA 59.821 55.000 0.00 0.00 0.00 3.91
2820 6294 1.579698 CTCCATCCATCGTCAGCAAG 58.420 55.000 0.00 0.00 0.00 4.01
2821 6295 0.462581 TCCATCCATCGTCAGCAAGC 60.463 55.000 0.00 0.00 0.00 4.01
2822 6296 1.442526 CCATCCATCGTCAGCAAGCC 61.443 60.000 0.00 0.00 0.00 4.35
2823 6297 0.745486 CATCCATCGTCAGCAAGCCA 60.745 55.000 0.00 0.00 0.00 4.75
2824 6298 0.182061 ATCCATCGTCAGCAAGCCAT 59.818 50.000 0.00 0.00 0.00 4.40
2825 6299 0.745486 TCCATCGTCAGCAAGCCATG 60.745 55.000 0.00 0.00 0.00 3.66
2826 6300 0.745486 CCATCGTCAGCAAGCCATGA 60.745 55.000 0.00 0.00 0.00 3.07
2827 6301 0.656259 CATCGTCAGCAAGCCATGAG 59.344 55.000 0.00 0.00 0.00 2.90
2828 6302 0.251354 ATCGTCAGCAAGCCATGAGT 59.749 50.000 0.00 0.00 0.00 3.41
2829 6303 0.671472 TCGTCAGCAAGCCATGAGTG 60.671 55.000 0.00 0.00 0.00 3.51
2830 6304 0.952497 CGTCAGCAAGCCATGAGTGT 60.952 55.000 0.00 0.00 0.00 3.55
2831 6305 1.672737 CGTCAGCAAGCCATGAGTGTA 60.673 52.381 0.00 0.00 0.00 2.90
2832 6306 2.005451 GTCAGCAAGCCATGAGTGTAG 58.995 52.381 0.00 0.00 0.00 2.74
2833 6307 0.731417 CAGCAAGCCATGAGTGTAGC 59.269 55.000 0.00 0.00 0.00 3.58
2834 6308 0.617413 AGCAAGCCATGAGTGTAGCT 59.383 50.000 0.00 0.00 37.10 3.32
2835 6309 1.012841 GCAAGCCATGAGTGTAGCTC 58.987 55.000 0.00 0.00 44.36 4.09
2849 6323 2.588314 GCTCGATGCTGCCTCTGG 60.588 66.667 0.00 0.00 38.95 3.86
2850 6324 2.108566 CTCGATGCTGCCTCTGGG 59.891 66.667 0.00 0.00 0.00 4.45
2867 6341 3.277133 GCATCCGCCTCAGCAAAA 58.723 55.556 0.00 0.00 39.83 2.44
2868 6342 1.138247 GCATCCGCCTCAGCAAAAG 59.862 57.895 0.00 0.00 39.83 2.27
2869 6343 1.138247 CATCCGCCTCAGCAAAAGC 59.862 57.895 0.00 0.00 39.83 3.51
2870 6344 1.303561 ATCCGCCTCAGCAAAAGCA 60.304 52.632 0.00 0.00 39.83 3.91
2871 6345 0.895100 ATCCGCCTCAGCAAAAGCAA 60.895 50.000 0.00 0.00 39.83 3.91
2872 6346 1.106351 TCCGCCTCAGCAAAAGCAAA 61.106 50.000 0.00 0.00 39.83 3.68
2873 6347 0.940991 CCGCCTCAGCAAAAGCAAAC 60.941 55.000 0.00 0.00 39.83 2.93
2874 6348 0.031178 CGCCTCAGCAAAAGCAAACT 59.969 50.000 0.00 0.00 39.83 2.66
2875 6349 1.536709 CGCCTCAGCAAAAGCAAACTT 60.537 47.619 0.00 0.00 39.83 2.66
2876 6350 2.287547 CGCCTCAGCAAAAGCAAACTTA 60.288 45.455 0.00 0.00 39.83 2.24
2877 6351 3.612479 CGCCTCAGCAAAAGCAAACTTAT 60.612 43.478 0.00 0.00 39.83 1.73
2878 6352 4.309933 GCCTCAGCAAAAGCAAACTTATT 58.690 39.130 0.00 0.00 39.53 1.40
2879 6353 4.751600 GCCTCAGCAAAAGCAAACTTATTT 59.248 37.500 0.00 0.00 39.53 1.40
2880 6354 5.333568 GCCTCAGCAAAAGCAAACTTATTTG 60.334 40.000 0.00 0.00 42.73 2.32
2881 6355 7.449531 GCCTCAGCAAAAGCAAACTTATTTGA 61.450 38.462 3.99 0.00 42.59 2.69
2882 6356 8.846055 GCCTCAGCAAAAGCAAACTTATTTGAA 61.846 37.037 3.99 0.00 42.59 2.69
2902 6376 9.890629 ATTTGAACTCATAGTCTTGTATAAGCA 57.109 29.630 0.00 0.00 33.82 3.91
2903 6377 8.703604 TTGAACTCATAGTCTTGTATAAGCAC 57.296 34.615 0.00 0.00 33.82 4.40
2904 6378 7.265673 TGAACTCATAGTCTTGTATAAGCACC 58.734 38.462 0.00 0.00 33.82 5.01
2905 6379 5.833082 ACTCATAGTCTTGTATAAGCACCG 58.167 41.667 0.00 0.00 33.82 4.94
2906 6380 5.593095 ACTCATAGTCTTGTATAAGCACCGA 59.407 40.000 0.00 0.00 33.82 4.69
2907 6381 6.265649 ACTCATAGTCTTGTATAAGCACCGAT 59.734 38.462 0.00 0.00 33.82 4.18
2908 6382 7.050970 TCATAGTCTTGTATAAGCACCGATT 57.949 36.000 0.00 0.00 33.82 3.34
2909 6383 7.145985 TCATAGTCTTGTATAAGCACCGATTC 58.854 38.462 0.00 0.00 33.82 2.52
2910 6384 5.339008 AGTCTTGTATAAGCACCGATTCA 57.661 39.130 0.00 0.00 33.82 2.57
2911 6385 5.730550 AGTCTTGTATAAGCACCGATTCAA 58.269 37.500 0.00 0.00 33.82 2.69
2912 6386 5.812642 AGTCTTGTATAAGCACCGATTCAAG 59.187 40.000 0.00 0.00 33.89 3.02
2913 6387 5.581085 GTCTTGTATAAGCACCGATTCAAGT 59.419 40.000 0.00 0.00 34.13 3.16
2914 6388 5.810587 TCTTGTATAAGCACCGATTCAAGTC 59.189 40.000 0.00 0.00 34.13 3.01
2915 6389 5.079689 TGTATAAGCACCGATTCAAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2916 6390 5.670485 TGTATAAGCACCGATTCAAGTCAT 58.330 37.500 0.00 0.00 0.00 3.06
2917 6391 5.753438 TGTATAAGCACCGATTCAAGTCATC 59.247 40.000 0.00 0.00 0.00 2.92
2918 6392 1.645034 AGCACCGATTCAAGTCATCG 58.355 50.000 0.00 0.00 42.68 3.84
2919 6393 1.204704 AGCACCGATTCAAGTCATCGA 59.795 47.619 3.92 0.00 45.30 3.59
2920 6394 2.159043 AGCACCGATTCAAGTCATCGAT 60.159 45.455 3.92 0.00 45.30 3.59
2921 6395 2.609459 GCACCGATTCAAGTCATCGATT 59.391 45.455 0.00 0.00 45.30 3.34
2922 6396 3.302740 GCACCGATTCAAGTCATCGATTC 60.303 47.826 0.00 0.00 45.30 2.52
2923 6397 3.865164 CACCGATTCAAGTCATCGATTCA 59.135 43.478 0.00 0.00 45.30 2.57
2924 6398 4.026228 CACCGATTCAAGTCATCGATTCAG 60.026 45.833 0.00 0.00 45.30 3.02
2925 6399 4.142160 ACCGATTCAAGTCATCGATTCAGA 60.142 41.667 0.00 0.00 45.30 3.27
2926 6400 4.805719 CCGATTCAAGTCATCGATTCAGAA 59.194 41.667 0.00 2.03 45.30 3.02
2927 6401 5.276584 CCGATTCAAGTCATCGATTCAGAAC 60.277 44.000 0.00 0.00 45.30 3.01
2928 6402 5.289434 CGATTCAAGTCATCGATTCAGAACA 59.711 40.000 0.00 0.00 45.30 3.18
2929 6403 6.019237 CGATTCAAGTCATCGATTCAGAACAT 60.019 38.462 0.00 0.00 45.30 2.71
2930 6404 6.413018 TTCAAGTCATCGATTCAGAACATG 57.587 37.500 0.00 0.00 0.00 3.21
2931 6405 5.723295 TCAAGTCATCGATTCAGAACATGA 58.277 37.500 0.00 0.00 35.62 3.07
2932 6406 5.809051 TCAAGTCATCGATTCAGAACATGAG 59.191 40.000 0.00 0.00 39.68 2.90
2933 6407 5.588958 AGTCATCGATTCAGAACATGAGA 57.411 39.130 0.00 0.00 39.68 3.27
2934 6408 5.347342 AGTCATCGATTCAGAACATGAGAC 58.653 41.667 0.00 0.00 39.68 3.36
2935 6409 4.205996 GTCATCGATTCAGAACATGAGACG 59.794 45.833 0.00 0.00 39.68 4.18
2936 6410 2.530177 TCGATTCAGAACATGAGACGC 58.470 47.619 0.00 0.00 39.68 5.19
2937 6411 1.590238 CGATTCAGAACATGAGACGCC 59.410 52.381 0.00 0.00 39.68 5.68
2938 6412 1.590238 GATTCAGAACATGAGACGCCG 59.410 52.381 0.00 0.00 39.68 6.46
2939 6413 0.601057 TTCAGAACATGAGACGCCGA 59.399 50.000 0.00 0.00 39.68 5.54
2940 6414 0.109272 TCAGAACATGAGACGCCGAC 60.109 55.000 0.00 0.00 32.77 4.79
2941 6415 3.710430 TCAGAACATGAGACGCCGACG 62.710 57.143 0.00 0.00 38.22 5.12
2942 6416 2.126071 AACATGAGACGCCGACGG 60.126 61.111 10.29 10.29 46.04 4.79
2943 6417 2.537792 GAACATGAGACGCCGACGGA 62.538 60.000 20.50 0.00 46.04 4.69
2944 6418 2.579787 CATGAGACGCCGACGGAC 60.580 66.667 20.50 8.22 46.04 4.79
2945 6419 3.060000 ATGAGACGCCGACGGACA 61.060 61.111 20.50 9.16 46.04 4.02
2946 6420 3.338126 ATGAGACGCCGACGGACAC 62.338 63.158 20.50 7.30 46.04 3.67
2949 6423 4.471726 GACGCCGACGGACACGAT 62.472 66.667 20.50 2.79 46.04 3.73
2950 6424 4.471726 ACGCCGACGGACACGATC 62.472 66.667 20.50 0.00 46.04 3.69
2951 6425 4.175489 CGCCGACGGACACGATCT 62.175 66.667 20.50 0.00 44.60 2.75
2952 6426 2.579787 GCCGACGGACACGATCTG 60.580 66.667 20.50 0.00 44.60 2.90
2965 6439 3.999229 ACGATCTGTGAAGAAAATCGC 57.001 42.857 3.23 0.00 42.11 4.58
2966 6440 2.673368 ACGATCTGTGAAGAAAATCGCC 59.327 45.455 3.23 0.00 42.11 5.54
2967 6441 2.285256 CGATCTGTGAAGAAAATCGCCG 60.285 50.000 0.00 0.00 33.69 6.46
2968 6442 0.796312 TCTGTGAAGAAAATCGCCGC 59.204 50.000 0.00 0.00 0.00 6.53
2969 6443 0.179189 CTGTGAAGAAAATCGCCGCC 60.179 55.000 0.00 0.00 0.00 6.13
2970 6444 1.226018 GTGAAGAAAATCGCCGCCG 60.226 57.895 0.00 0.00 0.00 6.46
2971 6445 2.395360 TGAAGAAAATCGCCGCCGG 61.395 57.895 0.00 0.00 34.56 6.13
2972 6446 3.734834 GAAGAAAATCGCCGCCGGC 62.735 63.158 20.42 20.42 46.75 6.13
2984 6458 2.975799 GCCGGCGGACACTGAAAA 60.976 61.111 33.44 0.00 0.00 2.29
2985 6459 2.966309 GCCGGCGGACACTGAAAAG 61.966 63.158 33.44 0.00 0.00 2.27
2986 6460 1.301401 CCGGCGGACACTGAAAAGA 60.301 57.895 24.41 0.00 0.00 2.52
2987 6461 0.673644 CCGGCGGACACTGAAAAGAT 60.674 55.000 24.41 0.00 0.00 2.40
2988 6462 0.443869 CGGCGGACACTGAAAAGATG 59.556 55.000 0.00 0.00 0.00 2.90
2989 6463 0.169009 GGCGGACACTGAAAAGATGC 59.831 55.000 0.00 0.00 0.00 3.91
2990 6464 0.874390 GCGGACACTGAAAAGATGCA 59.126 50.000 0.00 0.00 0.00 3.96
2991 6465 1.470098 GCGGACACTGAAAAGATGCAT 59.530 47.619 0.00 0.00 0.00 3.96
2992 6466 2.730090 GCGGACACTGAAAAGATGCATG 60.730 50.000 2.46 0.00 0.00 4.06
2993 6467 2.485426 CGGACACTGAAAAGATGCATGT 59.515 45.455 2.46 0.00 0.00 3.21
2994 6468 3.684305 CGGACACTGAAAAGATGCATGTA 59.316 43.478 2.46 0.00 0.00 2.29
2995 6469 4.201753 CGGACACTGAAAAGATGCATGTAG 60.202 45.833 2.46 0.00 0.00 2.74
2996 6470 4.937620 GGACACTGAAAAGATGCATGTAGA 59.062 41.667 2.46 0.00 0.00 2.59
2997 6471 5.412594 GGACACTGAAAAGATGCATGTAGAA 59.587 40.000 2.46 0.00 0.00 2.10
2998 6472 6.072508 GGACACTGAAAAGATGCATGTAGAAA 60.073 38.462 2.46 0.00 0.00 2.52
2999 6473 6.672147 ACACTGAAAAGATGCATGTAGAAAC 58.328 36.000 2.46 0.00 0.00 2.78
3000 6474 6.488006 ACACTGAAAAGATGCATGTAGAAACT 59.512 34.615 2.46 0.00 0.00 2.66
3001 6475 7.020010 CACTGAAAAGATGCATGTAGAAACTC 58.980 38.462 2.46 0.00 0.00 3.01
3002 6476 6.150140 ACTGAAAAGATGCATGTAGAAACTCC 59.850 38.462 2.46 0.00 0.00 3.85
3003 6477 6.003326 TGAAAAGATGCATGTAGAAACTCCA 58.997 36.000 2.46 0.00 0.00 3.86
3004 6478 6.489700 TGAAAAGATGCATGTAGAAACTCCAA 59.510 34.615 2.46 0.00 0.00 3.53
3005 6479 6.899393 AAAGATGCATGTAGAAACTCCAAA 57.101 33.333 2.46 0.00 0.00 3.28
3006 6480 6.506500 AAGATGCATGTAGAAACTCCAAAG 57.493 37.500 2.46 0.00 0.00 2.77
3007 6481 5.809001 AGATGCATGTAGAAACTCCAAAGA 58.191 37.500 2.46 0.00 0.00 2.52
3008 6482 5.645497 AGATGCATGTAGAAACTCCAAAGAC 59.355 40.000 2.46 0.00 0.00 3.01
3009 6483 4.072131 TGCATGTAGAAACTCCAAAGACC 58.928 43.478 0.00 0.00 0.00 3.85
3010 6484 4.072131 GCATGTAGAAACTCCAAAGACCA 58.928 43.478 0.00 0.00 0.00 4.02
3011 6485 4.702131 GCATGTAGAAACTCCAAAGACCAT 59.298 41.667 0.00 0.00 0.00 3.55
3012 6486 5.392380 GCATGTAGAAACTCCAAAGACCATG 60.392 44.000 0.00 0.00 0.00 3.66
3013 6487 5.560722 TGTAGAAACTCCAAAGACCATGA 57.439 39.130 0.00 0.00 0.00 3.07
3014 6488 5.935945 TGTAGAAACTCCAAAGACCATGAA 58.064 37.500 0.00 0.00 0.00 2.57
3015 6489 6.361433 TGTAGAAACTCCAAAGACCATGAAA 58.639 36.000 0.00 0.00 0.00 2.69
3016 6490 6.831353 TGTAGAAACTCCAAAGACCATGAAAA 59.169 34.615 0.00 0.00 0.00 2.29
3017 6491 6.149129 AGAAACTCCAAAGACCATGAAAAC 57.851 37.500 0.00 0.00 0.00 2.43
3018 6492 4.568152 AACTCCAAAGACCATGAAAACG 57.432 40.909 0.00 0.00 0.00 3.60
3019 6493 3.815809 ACTCCAAAGACCATGAAAACGA 58.184 40.909 0.00 0.00 0.00 3.85
3020 6494 3.815401 ACTCCAAAGACCATGAAAACGAG 59.185 43.478 0.00 0.00 0.00 4.18
3021 6495 3.815401 CTCCAAAGACCATGAAAACGAGT 59.185 43.478 0.00 0.00 0.00 4.18
3022 6496 3.813166 TCCAAAGACCATGAAAACGAGTC 59.187 43.478 0.00 0.00 0.00 3.36
3023 6497 3.363970 CCAAAGACCATGAAAACGAGTCG 60.364 47.826 11.85 11.85 32.70 4.18
3024 6498 3.380479 AAGACCATGAAAACGAGTCGA 57.620 42.857 21.50 0.00 32.70 4.20
3025 6499 3.380479 AGACCATGAAAACGAGTCGAA 57.620 42.857 21.50 0.00 32.70 3.71
3026 6500 3.926616 AGACCATGAAAACGAGTCGAAT 58.073 40.909 21.50 4.51 32.70 3.34
3027 6501 3.927142 AGACCATGAAAACGAGTCGAATC 59.073 43.478 21.50 13.88 32.70 2.52
3028 6502 3.000727 ACCATGAAAACGAGTCGAATCC 58.999 45.455 21.50 6.20 0.00 3.01
3029 6503 3.000041 CCATGAAAACGAGTCGAATCCA 59.000 45.455 21.50 11.70 0.00 3.41
3030 6504 3.062639 CCATGAAAACGAGTCGAATCCAG 59.937 47.826 21.50 8.65 0.00 3.86
3031 6505 3.653539 TGAAAACGAGTCGAATCCAGA 57.346 42.857 21.50 0.00 0.00 3.86
3032 6506 4.188247 TGAAAACGAGTCGAATCCAGAT 57.812 40.909 21.50 0.00 0.00 2.90
3033 6507 3.926527 TGAAAACGAGTCGAATCCAGATG 59.073 43.478 21.50 0.00 0.00 2.90
3034 6508 2.586258 AACGAGTCGAATCCAGATGG 57.414 50.000 21.50 0.00 0.00 3.51
3047 6521 3.955471 TCCAGATGGATCCACTGAAAAC 58.045 45.455 30.30 13.86 39.78 2.43
3048 6522 3.019564 CCAGATGGATCCACTGAAAACC 58.980 50.000 30.30 11.33 37.39 3.27
3049 6523 3.561960 CCAGATGGATCCACTGAAAACCA 60.562 47.826 30.30 5.59 37.39 3.67
3050 6524 4.081406 CAGATGGATCCACTGAAAACCAA 58.919 43.478 27.15 1.18 34.07 3.67
3051 6525 4.523943 CAGATGGATCCACTGAAAACCAAA 59.476 41.667 27.15 1.00 34.07 3.28
3052 6526 5.010922 CAGATGGATCCACTGAAAACCAAAA 59.989 40.000 27.15 0.60 34.07 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 88 7.251704 TGAGCTGTTAAAACTTGAAAGAGAG 57.748 36.000 0.00 0.00 0.00 3.20
94 97 4.671377 TGTGCTTGAGCTGTTAAAACTTG 58.329 39.130 4.44 0.00 42.66 3.16
121 124 2.887152 CAGTGGAGCTTTTTAAGGTGCT 59.113 45.455 10.62 0.00 45.95 4.40
147 150 8.789825 ATAAGATGCATGATATCTCTTGGTTC 57.210 34.615 2.46 0.00 33.92 3.62
264 267 1.067706 TGGTTATGTGCAATGCTGTGC 60.068 47.619 6.82 5.36 45.15 4.57
305 312 8.263640 TCGGAGTAGAATAGTCTAAACACTACT 58.736 37.037 0.63 0.00 40.86 2.57
306 313 8.430801 TCGGAGTAGAATAGTCTAAACACTAC 57.569 38.462 0.63 0.00 40.86 2.73
375 383 5.909610 CGAAGTTTGGATTTCTTCAGTTGTC 59.090 40.000 0.00 0.00 37.87 3.18
444 452 2.317149 GATTGCTCTGTCCCTCCCCG 62.317 65.000 0.00 0.00 0.00 5.73
449 457 1.834263 GGTACTGATTGCTCTGTCCCT 59.166 52.381 0.00 0.00 35.46 4.20
607 616 1.536418 TCCCTGTAGTGCCTGCTGT 60.536 57.895 0.00 0.00 0.00 4.40
614 623 0.671251 CCGAGATCTCCCTGTAGTGC 59.329 60.000 17.13 0.00 0.00 4.40
640 649 1.093159 TAAACGTCGAGGCCTCTCTC 58.907 55.000 29.73 17.73 37.86 3.20
694 703 1.674057 CCCGTTGGCTCTGTTCTCT 59.326 57.895 0.00 0.00 0.00 3.10
828 847 4.505191 CCAGCAAGTGTTGTTTCATTTCAG 59.495 41.667 0.00 0.00 0.00 3.02
894 914 4.779733 GGGGAGGAGACGGGCTCA 62.780 72.222 13.87 0.00 45.81 4.26
962 987 2.287608 CCTCCCAACTTTTCGTTTCTGC 60.288 50.000 0.00 0.00 32.27 4.26
968 993 2.300437 CTCTCTCCTCCCAACTTTTCGT 59.700 50.000 0.00 0.00 0.00 3.85
983 1008 3.366273 CGGCATTGCTCTATCTCTCTCTC 60.366 52.174 8.82 0.00 0.00 3.20
993 1018 3.195002 GCACGCGGCATTGCTCTA 61.195 61.111 12.47 0.00 43.97 2.43
1130 1181 2.262915 CGAGCTCCTTCGCCTTGT 59.737 61.111 8.47 0.00 33.39 3.16
1285 1336 1.320344 TAGCTGGCCTGATCGAACGT 61.320 55.000 14.77 0.00 0.00 3.99
1286 1337 0.872021 GTAGCTGGCCTGATCGAACG 60.872 60.000 14.77 0.00 0.00 3.95
1629 1680 1.076705 GGGCTTCACCTTGGGATCC 60.077 63.158 1.92 1.92 39.10 3.36
1630 1681 1.452108 CGGGCTTCACCTTGGGATC 60.452 63.158 0.00 0.00 39.10 3.36
1631 1682 2.677228 CGGGCTTCACCTTGGGAT 59.323 61.111 0.00 0.00 39.10 3.85
1632 1683 4.344865 GCGGGCTTCACCTTGGGA 62.345 66.667 0.00 0.00 39.10 4.37
1750 1801 0.678048 GCGGGCTTCTCCTTGTGATT 60.678 55.000 0.00 0.00 34.39 2.57
2135 2196 2.254471 CTAGTAGATAGCGGCGGCA 58.746 57.895 19.21 4.99 43.41 5.69
2211 2377 1.335145 GGGGAAATCGATCGGGACTA 58.665 55.000 16.41 0.00 0.00 2.59
2279 2449 7.223777 GTCCGGTTCTACAGTTACTAGTACTAG 59.776 44.444 25.30 25.30 39.04 2.57
2302 2472 5.978322 GGTGTTTCTTCGATCTATAGTGTCC 59.022 44.000 0.00 0.00 0.00 4.02
2303 2473 5.681982 CGGTGTTTCTTCGATCTATAGTGTC 59.318 44.000 0.00 0.00 0.00 3.67
2309 2479 6.566187 CGATCTACGGTGTTTCTTCGATCTAT 60.566 42.308 0.00 0.00 38.46 1.98
2358 2538 2.791927 GAAAATCGGCCTCGGTGC 59.208 61.111 0.00 0.00 36.95 5.01
2368 2548 4.857871 TGATGTTCTAAGCCGAAAATCG 57.142 40.909 6.65 0.00 39.46 3.34
2369 2549 6.308041 GGTTTTGATGTTCTAAGCCGAAAATC 59.692 38.462 4.88 4.88 37.88 2.17
2370 2550 6.015434 AGGTTTTGATGTTCTAAGCCGAAAAT 60.015 34.615 0.00 0.00 37.50 1.82
2371 2551 5.300792 AGGTTTTGATGTTCTAAGCCGAAAA 59.699 36.000 0.00 0.00 37.50 2.29
2381 2561 4.141158 ACCAGAGGAAGGTTTTGATGTTCT 60.141 41.667 0.00 0.00 35.33 3.01
2404 2584 3.385433 TGGATATTTCCTCCGAAGCGTAA 59.615 43.478 3.72 0.00 43.07 3.18
2405 2585 2.960384 TGGATATTTCCTCCGAAGCGTA 59.040 45.455 3.72 0.00 43.07 4.42
2412 5883 2.103094 TGCAGACTGGATATTTCCTCCG 59.897 50.000 4.26 0.00 43.07 4.63
2419 5890 7.230849 TCAATTGTTTTGCAGACTGGATATT 57.769 32.000 5.13 0.00 0.00 1.28
2424 5895 3.054878 GCTCAATTGTTTTGCAGACTGG 58.945 45.455 5.13 0.00 0.00 4.00
2447 5921 7.010160 TCAACCAAGAAATATTTCCAACCTCT 58.990 34.615 21.86 1.49 37.92 3.69
2459 5933 9.881529 GTACATAAAAACGTCAACCAAGAAATA 57.118 29.630 0.00 0.00 0.00 1.40
2460 5934 8.626526 AGTACATAAAAACGTCAACCAAGAAAT 58.373 29.630 0.00 0.00 0.00 2.17
2461 5935 7.987649 AGTACATAAAAACGTCAACCAAGAAA 58.012 30.769 0.00 0.00 0.00 2.52
2462 5936 7.254863 GGAGTACATAAAAACGTCAACCAAGAA 60.255 37.037 0.00 0.00 0.00 2.52
2463 5937 6.203338 GGAGTACATAAAAACGTCAACCAAGA 59.797 38.462 0.00 0.00 0.00 3.02
2464 5938 6.204108 AGGAGTACATAAAAACGTCAACCAAG 59.796 38.462 0.00 0.00 0.00 3.61
2465 5939 6.056884 AGGAGTACATAAAAACGTCAACCAA 58.943 36.000 0.00 0.00 0.00 3.67
2466 5940 5.613329 AGGAGTACATAAAAACGTCAACCA 58.387 37.500 0.00 0.00 0.00 3.67
2467 5941 7.838771 ATAGGAGTACATAAAAACGTCAACC 57.161 36.000 0.00 0.00 0.00 3.77
2477 5951 9.458727 CGGAGGAAGTATATAGGAGTACATAAA 57.541 37.037 0.00 0.00 0.00 1.40
2478 5952 8.609483 ACGGAGGAAGTATATAGGAGTACATAA 58.391 37.037 0.00 0.00 0.00 1.90
2479 5953 8.155620 ACGGAGGAAGTATATAGGAGTACATA 57.844 38.462 0.00 0.00 0.00 2.29
2480 5954 7.030234 ACGGAGGAAGTATATAGGAGTACAT 57.970 40.000 0.00 0.00 0.00 2.29
2481 5955 6.445451 ACGGAGGAAGTATATAGGAGTACA 57.555 41.667 0.00 0.00 0.00 2.90
2482 5956 5.879777 GGACGGAGGAAGTATATAGGAGTAC 59.120 48.000 0.00 0.00 0.00 2.73
2483 5957 5.045286 GGGACGGAGGAAGTATATAGGAGTA 60.045 48.000 0.00 0.00 0.00 2.59
2484 5958 4.263860 GGGACGGAGGAAGTATATAGGAGT 60.264 50.000 0.00 0.00 0.00 3.85
2485 5959 4.263816 TGGGACGGAGGAAGTATATAGGAG 60.264 50.000 0.00 0.00 0.00 3.69
2486 5960 3.659195 TGGGACGGAGGAAGTATATAGGA 59.341 47.826 0.00 0.00 0.00 2.94
2487 5961 4.043608 TGGGACGGAGGAAGTATATAGG 57.956 50.000 0.00 0.00 0.00 2.57
2488 5962 6.415206 TTTTGGGACGGAGGAAGTATATAG 57.585 41.667 0.00 0.00 0.00 1.31
2489 5963 7.291651 AGAATTTTGGGACGGAGGAAGTATATA 59.708 37.037 0.00 0.00 0.00 0.86
2490 5964 5.906772 ATTTTGGGACGGAGGAAGTATAT 57.093 39.130 0.00 0.00 0.00 0.86
2491 5965 5.427481 AGAATTTTGGGACGGAGGAAGTATA 59.573 40.000 0.00 0.00 0.00 1.47
2492 5966 4.227527 AGAATTTTGGGACGGAGGAAGTAT 59.772 41.667 0.00 0.00 0.00 2.12
2493 5967 3.585732 AGAATTTTGGGACGGAGGAAGTA 59.414 43.478 0.00 0.00 0.00 2.24
2494 5968 2.375509 AGAATTTTGGGACGGAGGAAGT 59.624 45.455 0.00 0.00 0.00 3.01
2495 5969 3.073274 AGAATTTTGGGACGGAGGAAG 57.927 47.619 0.00 0.00 0.00 3.46
2496 5970 3.153919 CAAGAATTTTGGGACGGAGGAA 58.846 45.455 0.00 0.00 0.00 3.36
2497 5971 2.107552 ACAAGAATTTTGGGACGGAGGA 59.892 45.455 0.00 0.00 0.00 3.71
2498 5972 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2499 5973 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2500 5974 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2501 5975 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2502 5976 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2503 5977 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2504 5978 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2505 5979 9.546428 AAACAAATCTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.04 4.12
2513 5987 9.582431 CCGTATCTAAACAAATCTAAGACAAGA 57.418 33.333 0.00 0.00 0.00 3.02
2514 5988 9.582431 TCCGTATCTAAACAAATCTAAGACAAG 57.418 33.333 0.00 0.00 0.00 3.16
2516 5990 9.529325 CATCCGTATCTAAACAAATCTAAGACA 57.471 33.333 0.00 0.00 0.00 3.41
2517 5991 9.530633 ACATCCGTATCTAAACAAATCTAAGAC 57.469 33.333 0.00 0.00 0.00 3.01
2585 6059 8.512138 CCGTCCTAAAATTCTTGTCTTACATTT 58.488 33.333 0.00 0.00 0.00 2.32
2586 6060 7.881232 TCCGTCCTAAAATTCTTGTCTTACATT 59.119 33.333 0.00 0.00 0.00 2.71
2587 6061 7.391620 TCCGTCCTAAAATTCTTGTCTTACAT 58.608 34.615 0.00 0.00 0.00 2.29
2588 6062 6.761312 TCCGTCCTAAAATTCTTGTCTTACA 58.239 36.000 0.00 0.00 0.00 2.41
2589 6063 6.313164 CCTCCGTCCTAAAATTCTTGTCTTAC 59.687 42.308 0.00 0.00 0.00 2.34
2590 6064 6.403878 CCTCCGTCCTAAAATTCTTGTCTTA 58.596 40.000 0.00 0.00 0.00 2.10
2591 6065 5.246307 CCTCCGTCCTAAAATTCTTGTCTT 58.754 41.667 0.00 0.00 0.00 3.01
2592 6066 4.323562 CCCTCCGTCCTAAAATTCTTGTCT 60.324 45.833 0.00 0.00 0.00 3.41
2593 6067 3.939592 CCCTCCGTCCTAAAATTCTTGTC 59.060 47.826 0.00 0.00 0.00 3.18
2594 6068 3.585732 TCCCTCCGTCCTAAAATTCTTGT 59.414 43.478 0.00 0.00 0.00 3.16
2595 6069 4.192317 CTCCCTCCGTCCTAAAATTCTTG 58.808 47.826 0.00 0.00 0.00 3.02
2596 6070 3.844804 ACTCCCTCCGTCCTAAAATTCTT 59.155 43.478 0.00 0.00 0.00 2.52
2597 6071 3.451890 ACTCCCTCCGTCCTAAAATTCT 58.548 45.455 0.00 0.00 0.00 2.40
2598 6072 3.908643 ACTCCCTCCGTCCTAAAATTC 57.091 47.619 0.00 0.00 0.00 2.17
2599 6073 3.453717 GGTACTCCCTCCGTCCTAAAATT 59.546 47.826 0.00 0.00 0.00 1.82
2600 6074 3.036819 GGTACTCCCTCCGTCCTAAAAT 58.963 50.000 0.00 0.00 0.00 1.82
2601 6075 2.225343 TGGTACTCCCTCCGTCCTAAAA 60.225 50.000 0.00 0.00 0.00 1.52
2602 6076 1.358787 TGGTACTCCCTCCGTCCTAAA 59.641 52.381 0.00 0.00 0.00 1.85
2603 6077 1.002069 TGGTACTCCCTCCGTCCTAA 58.998 55.000 0.00 0.00 0.00 2.69
2604 6078 1.002069 TTGGTACTCCCTCCGTCCTA 58.998 55.000 0.00 0.00 0.00 2.94
2605 6079 0.115745 TTTGGTACTCCCTCCGTCCT 59.884 55.000 0.00 0.00 0.00 3.85
2606 6080 0.978907 TTTTGGTACTCCCTCCGTCC 59.021 55.000 0.00 0.00 0.00 4.79
2607 6081 1.338484 GGTTTTGGTACTCCCTCCGTC 60.338 57.143 0.00 0.00 0.00 4.79
2608 6082 0.689055 GGTTTTGGTACTCCCTCCGT 59.311 55.000 0.00 0.00 0.00 4.69
2609 6083 0.688487 TGGTTTTGGTACTCCCTCCG 59.312 55.000 0.00 0.00 0.00 4.63
2610 6084 2.963599 TTGGTTTTGGTACTCCCTCC 57.036 50.000 0.00 0.00 0.00 4.30
2611 6085 2.557056 GCTTTGGTTTTGGTACTCCCTC 59.443 50.000 0.00 0.00 0.00 4.30
2612 6086 2.091555 TGCTTTGGTTTTGGTACTCCCT 60.092 45.455 0.00 0.00 0.00 4.20
2613 6087 2.035449 GTGCTTTGGTTTTGGTACTCCC 59.965 50.000 0.00 0.00 0.00 4.30
2614 6088 2.691011 TGTGCTTTGGTTTTGGTACTCC 59.309 45.455 0.00 0.00 0.00 3.85
2615 6089 4.584327 ATGTGCTTTGGTTTTGGTACTC 57.416 40.909 0.00 0.00 0.00 2.59
2616 6090 4.279922 GGTATGTGCTTTGGTTTTGGTACT 59.720 41.667 0.00 0.00 0.00 2.73
2617 6091 4.038162 TGGTATGTGCTTTGGTTTTGGTAC 59.962 41.667 0.00 0.00 0.00 3.34
2618 6092 4.215908 TGGTATGTGCTTTGGTTTTGGTA 58.784 39.130 0.00 0.00 0.00 3.25
2619 6093 3.034635 TGGTATGTGCTTTGGTTTTGGT 58.965 40.909 0.00 0.00 0.00 3.67
2620 6094 3.069443 ACTGGTATGTGCTTTGGTTTTGG 59.931 43.478 0.00 0.00 0.00 3.28
2621 6095 4.320608 ACTGGTATGTGCTTTGGTTTTG 57.679 40.909 0.00 0.00 0.00 2.44
2622 6096 6.664428 AATACTGGTATGTGCTTTGGTTTT 57.336 33.333 0.00 0.00 0.00 2.43
2623 6097 6.664428 AAATACTGGTATGTGCTTTGGTTT 57.336 33.333 0.00 0.00 0.00 3.27
2624 6098 6.454795 CAAAATACTGGTATGTGCTTTGGTT 58.545 36.000 7.31 0.00 0.00 3.67
2625 6099 5.047377 CCAAAATACTGGTATGTGCTTTGGT 60.047 40.000 17.69 0.00 37.73 3.67
2626 6100 5.410067 CCAAAATACTGGTATGTGCTTTGG 58.590 41.667 14.72 14.72 37.02 3.28
2627 6101 4.864247 GCCAAAATACTGGTATGTGCTTTG 59.136 41.667 7.87 7.87 38.86 2.77
2628 6102 4.081697 GGCCAAAATACTGGTATGTGCTTT 60.082 41.667 0.00 0.00 38.86 3.51
2629 6103 3.447229 GGCCAAAATACTGGTATGTGCTT 59.553 43.478 0.00 0.00 38.86 3.91
2630 6104 3.023832 GGCCAAAATACTGGTATGTGCT 58.976 45.455 0.00 0.00 38.86 4.40
2631 6105 2.757868 TGGCCAAAATACTGGTATGTGC 59.242 45.455 0.61 0.00 38.86 4.57
2632 6106 4.737352 GCATGGCCAAAATACTGGTATGTG 60.737 45.833 10.96 0.00 38.86 3.21
2633 6107 3.384467 GCATGGCCAAAATACTGGTATGT 59.616 43.478 10.96 0.00 38.86 2.29
2634 6108 3.638160 AGCATGGCCAAAATACTGGTATG 59.362 43.478 10.96 0.00 38.86 2.39
2635 6109 3.891366 GAGCATGGCCAAAATACTGGTAT 59.109 43.478 10.96 0.00 38.86 2.73
2636 6110 3.287222 GAGCATGGCCAAAATACTGGTA 58.713 45.455 10.96 0.00 38.86 3.25
2637 6111 2.102578 GAGCATGGCCAAAATACTGGT 58.897 47.619 10.96 8.08 38.86 4.00
2638 6112 2.100252 CTGAGCATGGCCAAAATACTGG 59.900 50.000 10.96 0.00 39.71 4.00
2639 6113 3.018856 TCTGAGCATGGCCAAAATACTG 58.981 45.455 10.96 2.75 0.00 2.74
2640 6114 3.370840 TCTGAGCATGGCCAAAATACT 57.629 42.857 10.96 2.24 0.00 2.12
2641 6115 4.660789 ATTCTGAGCATGGCCAAAATAC 57.339 40.909 10.96 1.02 0.00 1.89
2642 6116 5.680594 AAATTCTGAGCATGGCCAAAATA 57.319 34.783 10.96 0.00 0.00 1.40
2643 6117 4.563140 AAATTCTGAGCATGGCCAAAAT 57.437 36.364 10.96 0.00 0.00 1.82
2644 6118 4.066490 CAAAATTCTGAGCATGGCCAAAA 58.934 39.130 10.96 0.00 0.00 2.44
2645 6119 3.071312 ACAAAATTCTGAGCATGGCCAAA 59.929 39.130 10.96 0.00 0.00 3.28
2646 6120 2.633967 ACAAAATTCTGAGCATGGCCAA 59.366 40.909 10.96 0.00 0.00 4.52
2647 6121 2.231964 GACAAAATTCTGAGCATGGCCA 59.768 45.455 8.56 8.56 0.00 5.36
2648 6122 2.494870 AGACAAAATTCTGAGCATGGCC 59.505 45.455 0.00 0.00 0.00 5.36
2649 6123 3.442977 AGAGACAAAATTCTGAGCATGGC 59.557 43.478 0.00 0.00 0.00 4.40
2650 6124 5.048224 ACAAGAGACAAAATTCTGAGCATGG 60.048 40.000 0.00 0.00 0.00 3.66
2651 6125 6.010294 ACAAGAGACAAAATTCTGAGCATG 57.990 37.500 0.00 0.00 0.00 4.06
2652 6126 6.645790 AACAAGAGACAAAATTCTGAGCAT 57.354 33.333 0.00 0.00 0.00 3.79
2653 6127 6.267817 CAAACAAGAGACAAAATTCTGAGCA 58.732 36.000 0.00 0.00 0.00 4.26
2654 6128 5.689068 CCAAACAAGAGACAAAATTCTGAGC 59.311 40.000 0.00 0.00 0.00 4.26
2655 6129 7.031226 TCCAAACAAGAGACAAAATTCTGAG 57.969 36.000 0.00 0.00 0.00 3.35
2656 6130 7.587037 ATCCAAACAAGAGACAAAATTCTGA 57.413 32.000 0.00 0.00 0.00 3.27
2657 6131 8.652810 AAATCCAAACAAGAGACAAAATTCTG 57.347 30.769 0.00 0.00 0.00 3.02
2658 6132 9.101655 CAAAATCCAAACAAGAGACAAAATTCT 57.898 29.630 0.00 0.00 0.00 2.40
2659 6133 9.097257 TCAAAATCCAAACAAGAGACAAAATTC 57.903 29.630 0.00 0.00 0.00 2.17
2660 6134 8.882736 GTCAAAATCCAAACAAGAGACAAAATT 58.117 29.630 0.00 0.00 0.00 1.82
2661 6135 8.040132 TGTCAAAATCCAAACAAGAGACAAAAT 58.960 29.630 0.00 0.00 31.36 1.82
2662 6136 7.382110 TGTCAAAATCCAAACAAGAGACAAAA 58.618 30.769 0.00 0.00 31.36 2.44
2663 6137 6.929625 TGTCAAAATCCAAACAAGAGACAAA 58.070 32.000 0.00 0.00 31.36 2.83
2664 6138 6.522625 TGTCAAAATCCAAACAAGAGACAA 57.477 33.333 0.00 0.00 31.36 3.18
2665 6139 6.522625 TTGTCAAAATCCAAACAAGAGACA 57.477 33.333 0.00 0.00 0.00 3.41
2666 6140 8.424274 AAATTGTCAAAATCCAAACAAGAGAC 57.576 30.769 0.00 0.00 35.30 3.36
2667 6141 9.447157 AAAAATTGTCAAAATCCAAACAAGAGA 57.553 25.926 0.00 0.00 35.30 3.10
2703 6177 6.732896 TGGACTTAGGCCATTTTGTAAAAA 57.267 33.333 0.85 0.00 0.00 1.94
2704 6178 6.926630 ATGGACTTAGGCCATTTTGTAAAA 57.073 33.333 14.99 0.00 43.42 1.52
2705 6179 9.875708 ATATATGGACTTAGGCCATTTTGTAAA 57.124 29.630 26.15 5.33 43.42 2.01
2706 6180 9.515226 GATATATGGACTTAGGCCATTTTGTAA 57.485 33.333 26.15 6.15 43.42 2.41
2707 6181 8.664992 TGATATATGGACTTAGGCCATTTTGTA 58.335 33.333 26.15 13.18 43.42 2.41
2708 6182 7.526041 TGATATATGGACTTAGGCCATTTTGT 58.474 34.615 26.15 11.49 43.42 2.83
2709 6183 8.408043 TTGATATATGGACTTAGGCCATTTTG 57.592 34.615 26.15 0.00 43.42 2.44
2710 6184 8.227507 ACTTGATATATGGACTTAGGCCATTTT 58.772 33.333 26.15 15.35 43.42 1.82
2711 6185 7.759607 ACTTGATATATGGACTTAGGCCATTT 58.240 34.615 26.15 19.63 43.42 2.32
2712 6186 7.335127 ACTTGATATATGGACTTAGGCCATT 57.665 36.000 26.15 14.87 43.42 3.16
2714 6188 7.678171 TGATACTTGATATATGGACTTAGGCCA 59.322 37.037 10.19 10.19 40.24 5.36
2715 6189 7.982354 GTGATACTTGATATATGGACTTAGGCC 59.018 40.741 0.00 0.00 0.00 5.19
2716 6190 8.531982 TGTGATACTTGATATATGGACTTAGGC 58.468 37.037 0.00 0.00 0.00 3.93
2720 6194 9.935241 GACATGTGATACTTGATATATGGACTT 57.065 33.333 1.15 0.00 0.00 3.01
2721 6195 8.535335 GGACATGTGATACTTGATATATGGACT 58.465 37.037 1.15 0.00 0.00 3.85
2722 6196 8.535335 AGGACATGTGATACTTGATATATGGAC 58.465 37.037 1.15 0.00 0.00 4.02
2723 6197 8.670521 AGGACATGTGATACTTGATATATGGA 57.329 34.615 1.15 0.00 0.00 3.41
2731 6205 9.952030 TTTGTAATAAGGACATGTGATACTTGA 57.048 29.630 1.15 0.00 0.00 3.02
2758 6232 9.660180 GCACCCCAAGAATTTTAATACATTTTA 57.340 29.630 0.00 0.00 0.00 1.52
2759 6233 7.609918 GGCACCCCAAGAATTTTAATACATTTT 59.390 33.333 0.00 0.00 0.00 1.82
2760 6234 7.109501 GGCACCCCAAGAATTTTAATACATTT 58.890 34.615 0.00 0.00 0.00 2.32
2761 6235 6.629291 CGGCACCCCAAGAATTTTAATACATT 60.629 38.462 0.00 0.00 0.00 2.71
2762 6236 5.163457 CGGCACCCCAAGAATTTTAATACAT 60.163 40.000 0.00 0.00 0.00 2.29
2763 6237 4.158764 CGGCACCCCAAGAATTTTAATACA 59.841 41.667 0.00 0.00 0.00 2.29
2764 6238 4.399934 TCGGCACCCCAAGAATTTTAATAC 59.600 41.667 0.00 0.00 0.00 1.89
2765 6239 4.601084 TCGGCACCCCAAGAATTTTAATA 58.399 39.130 0.00 0.00 0.00 0.98
2766 6240 3.436243 TCGGCACCCCAAGAATTTTAAT 58.564 40.909 0.00 0.00 0.00 1.40
2767 6241 2.877866 TCGGCACCCCAAGAATTTTAA 58.122 42.857 0.00 0.00 0.00 1.52
2768 6242 2.588464 TCGGCACCCCAAGAATTTTA 57.412 45.000 0.00 0.00 0.00 1.52
2769 6243 1.618343 CTTCGGCACCCCAAGAATTTT 59.382 47.619 0.00 0.00 0.00 1.82
2770 6244 1.256812 CTTCGGCACCCCAAGAATTT 58.743 50.000 0.00 0.00 0.00 1.82
2771 6245 0.112412 ACTTCGGCACCCCAAGAATT 59.888 50.000 0.00 0.00 0.00 2.17
2772 6246 0.322546 GACTTCGGCACCCCAAGAAT 60.323 55.000 0.00 0.00 0.00 2.40
2773 6247 1.072505 GACTTCGGCACCCCAAGAA 59.927 57.895 0.00 0.00 0.00 2.52
2774 6248 1.415672 AAGACTTCGGCACCCCAAGA 61.416 55.000 0.00 0.00 0.00 3.02
2775 6249 0.955919 GAAGACTTCGGCACCCCAAG 60.956 60.000 0.00 0.00 0.00 3.61
2776 6250 1.072505 GAAGACTTCGGCACCCCAA 59.927 57.895 0.00 0.00 0.00 4.12
2777 6251 1.415672 AAGAAGACTTCGGCACCCCA 61.416 55.000 9.53 0.00 34.02 4.96
2778 6252 0.673956 GAAGAAGACTTCGGCACCCC 60.674 60.000 9.53 0.00 42.14 4.95
2779 6253 2.842320 GAAGAAGACTTCGGCACCC 58.158 57.895 9.53 0.00 42.14 4.61
2787 6261 4.171234 TGGATGGAGGAAGAAGAAGACTT 58.829 43.478 0.00 0.00 39.24 3.01
2788 6262 3.796111 TGGATGGAGGAAGAAGAAGACT 58.204 45.455 0.00 0.00 0.00 3.24
2789 6263 4.702831 GATGGATGGAGGAAGAAGAAGAC 58.297 47.826 0.00 0.00 0.00 3.01
2790 6264 3.386078 CGATGGATGGAGGAAGAAGAAGA 59.614 47.826 0.00 0.00 0.00 2.87
2791 6265 3.133721 ACGATGGATGGAGGAAGAAGAAG 59.866 47.826 0.00 0.00 0.00 2.85
2792 6266 3.107601 ACGATGGATGGAGGAAGAAGAA 58.892 45.455 0.00 0.00 0.00 2.52
2793 6267 2.695666 GACGATGGATGGAGGAAGAAGA 59.304 50.000 0.00 0.00 0.00 2.87
2794 6268 2.432146 TGACGATGGATGGAGGAAGAAG 59.568 50.000 0.00 0.00 0.00 2.85
2795 6269 2.432146 CTGACGATGGATGGAGGAAGAA 59.568 50.000 0.00 0.00 0.00 2.52
2796 6270 2.034878 CTGACGATGGATGGAGGAAGA 58.965 52.381 0.00 0.00 0.00 2.87
2797 6271 1.539929 GCTGACGATGGATGGAGGAAG 60.540 57.143 0.00 0.00 0.00 3.46
2798 6272 0.465705 GCTGACGATGGATGGAGGAA 59.534 55.000 0.00 0.00 0.00 3.36
2799 6273 0.687427 TGCTGACGATGGATGGAGGA 60.687 55.000 0.00 0.00 0.00 3.71
2800 6274 0.178767 TTGCTGACGATGGATGGAGG 59.821 55.000 0.00 0.00 0.00 4.30
2801 6275 1.579698 CTTGCTGACGATGGATGGAG 58.420 55.000 0.00 0.00 0.00 3.86
2802 6276 0.462581 GCTTGCTGACGATGGATGGA 60.463 55.000 0.00 0.00 0.00 3.41
2803 6277 1.442526 GGCTTGCTGACGATGGATGG 61.443 60.000 0.00 0.00 0.00 3.51
2804 6278 0.745486 TGGCTTGCTGACGATGGATG 60.745 55.000 0.00 0.00 0.00 3.51
2805 6279 0.182061 ATGGCTTGCTGACGATGGAT 59.818 50.000 0.00 0.00 0.00 3.41
2806 6280 0.745486 CATGGCTTGCTGACGATGGA 60.745 55.000 0.00 0.00 0.00 3.41
2807 6281 0.745486 TCATGGCTTGCTGACGATGG 60.745 55.000 0.00 0.00 0.00 3.51
2808 6282 0.656259 CTCATGGCTTGCTGACGATG 59.344 55.000 0.00 0.00 0.00 3.84
2809 6283 0.251354 ACTCATGGCTTGCTGACGAT 59.749 50.000 0.00 0.00 0.00 3.73
2810 6284 0.671472 CACTCATGGCTTGCTGACGA 60.671 55.000 0.00 0.00 0.00 4.20
2811 6285 0.952497 ACACTCATGGCTTGCTGACG 60.952 55.000 0.00 0.00 0.00 4.35
2812 6286 2.005451 CTACACTCATGGCTTGCTGAC 58.995 52.381 0.00 0.00 0.00 3.51
2813 6287 1.676916 GCTACACTCATGGCTTGCTGA 60.677 52.381 0.00 0.00 0.00 4.26
2814 6288 0.731417 GCTACACTCATGGCTTGCTG 59.269 55.000 0.00 0.00 0.00 4.41
2815 6289 0.617413 AGCTACACTCATGGCTTGCT 59.383 50.000 0.00 0.00 0.00 3.91
2816 6290 1.012841 GAGCTACACTCATGGCTTGC 58.987 55.000 0.00 0.00 45.49 4.01
2817 6291 1.134995 TCGAGCTACACTCATGGCTTG 60.135 52.381 0.00 0.00 46.63 4.01
2818 6292 1.186200 TCGAGCTACACTCATGGCTT 58.814 50.000 0.00 0.00 46.63 4.35
2819 6293 1.068281 CATCGAGCTACACTCATGGCT 59.932 52.381 0.00 0.00 46.63 4.75
2820 6294 1.495878 CATCGAGCTACACTCATGGC 58.504 55.000 0.00 0.00 46.63 4.40
2821 6295 1.495878 GCATCGAGCTACACTCATGG 58.504 55.000 0.00 0.00 46.63 3.66
2832 6306 2.588314 CCAGAGGCAGCATCGAGC 60.588 66.667 0.42 0.00 46.19 5.03
2833 6307 2.108566 CCCAGAGGCAGCATCGAG 59.891 66.667 0.42 0.00 0.00 4.04
2850 6324 1.138247 CTTTTGCTGAGGCGGATGC 59.862 57.895 0.00 0.00 42.25 3.91
2851 6325 1.138247 GCTTTTGCTGAGGCGGATG 59.862 57.895 0.00 0.00 43.35 3.51
2852 6326 3.595819 GCTTTTGCTGAGGCGGAT 58.404 55.556 0.00 0.00 43.35 4.18
2862 6336 7.232945 TGAGTTCAAATAAGTTTGCTTTTGC 57.767 32.000 0.00 0.00 43.47 3.68
2865 6339 9.899226 GACTATGAGTTCAAATAAGTTTGCTTT 57.101 29.630 0.00 0.00 43.47 3.51
2866 6340 9.289782 AGACTATGAGTTCAAATAAGTTTGCTT 57.710 29.630 0.00 0.00 43.47 3.91
2867 6341 8.854614 AGACTATGAGTTCAAATAAGTTTGCT 57.145 30.769 0.00 0.00 43.47 3.91
2868 6342 9.334693 CAAGACTATGAGTTCAAATAAGTTTGC 57.665 33.333 0.00 0.00 43.47 3.68
2876 6350 9.890629 TGCTTATACAAGACTATGAGTTCAAAT 57.109 29.630 0.00 0.00 33.20 2.32
2877 6351 9.151471 GTGCTTATACAAGACTATGAGTTCAAA 57.849 33.333 0.00 0.00 33.20 2.69
2878 6352 7.764443 GGTGCTTATACAAGACTATGAGTTCAA 59.236 37.037 0.00 0.00 33.20 2.69
2879 6353 7.265673 GGTGCTTATACAAGACTATGAGTTCA 58.734 38.462 0.00 0.00 33.20 3.18
2880 6354 6.418226 CGGTGCTTATACAAGACTATGAGTTC 59.582 42.308 0.00 0.00 33.20 3.01
2881 6355 6.096423 TCGGTGCTTATACAAGACTATGAGTT 59.904 38.462 0.00 0.00 33.20 3.01
2882 6356 5.593095 TCGGTGCTTATACAAGACTATGAGT 59.407 40.000 0.00 0.00 33.20 3.41
2883 6357 6.073327 TCGGTGCTTATACAAGACTATGAG 57.927 41.667 0.00 0.00 33.20 2.90
2884 6358 6.650427 ATCGGTGCTTATACAAGACTATGA 57.350 37.500 0.00 0.00 33.20 2.15
2885 6359 6.923508 TGAATCGGTGCTTATACAAGACTATG 59.076 38.462 0.00 0.00 33.20 2.23
2886 6360 7.050970 TGAATCGGTGCTTATACAAGACTAT 57.949 36.000 0.00 0.00 33.20 2.12
2887 6361 6.459670 TGAATCGGTGCTTATACAAGACTA 57.540 37.500 0.00 0.00 33.20 2.59
2888 6362 5.339008 TGAATCGGTGCTTATACAAGACT 57.661 39.130 0.00 0.00 33.20 3.24
2889 6363 5.581085 ACTTGAATCGGTGCTTATACAAGAC 59.419 40.000 0.00 0.00 37.49 3.01
2890 6364 5.730550 ACTTGAATCGGTGCTTATACAAGA 58.269 37.500 0.00 0.00 37.49 3.02
2891 6365 5.580691 TGACTTGAATCGGTGCTTATACAAG 59.419 40.000 0.00 0.00 39.17 3.16
2892 6366 5.483811 TGACTTGAATCGGTGCTTATACAA 58.516 37.500 0.00 0.00 0.00 2.41
2893 6367 5.079689 TGACTTGAATCGGTGCTTATACA 57.920 39.130 0.00 0.00 0.00 2.29
2894 6368 5.107837 CGATGACTTGAATCGGTGCTTATAC 60.108 44.000 0.00 0.00 42.47 1.47
2895 6369 4.982295 CGATGACTTGAATCGGTGCTTATA 59.018 41.667 0.00 0.00 42.47 0.98
2896 6370 3.804325 CGATGACTTGAATCGGTGCTTAT 59.196 43.478 0.00 0.00 42.47 1.73
2897 6371 3.119280 TCGATGACTTGAATCGGTGCTTA 60.119 43.478 6.03 0.00 45.43 3.09
2898 6372 2.002586 CGATGACTTGAATCGGTGCTT 58.997 47.619 0.00 0.00 42.47 3.91
2899 6373 1.204704 TCGATGACTTGAATCGGTGCT 59.795 47.619 6.03 0.00 45.43 4.40
2900 6374 1.640428 TCGATGACTTGAATCGGTGC 58.360 50.000 6.03 0.00 45.43 5.01
2901 6375 3.865164 TGAATCGATGACTTGAATCGGTG 59.135 43.478 0.00 0.00 45.43 4.94
2902 6376 4.115516 CTGAATCGATGACTTGAATCGGT 58.884 43.478 0.00 0.00 45.43 4.69
2903 6377 4.363138 TCTGAATCGATGACTTGAATCGG 58.637 43.478 0.00 0.00 45.43 4.18
2904 6378 5.289434 TGTTCTGAATCGATGACTTGAATCG 59.711 40.000 0.00 0.00 46.47 3.34
2905 6379 6.653273 TGTTCTGAATCGATGACTTGAATC 57.347 37.500 0.00 0.00 0.00 2.52
2906 6380 6.820152 TCATGTTCTGAATCGATGACTTGAAT 59.180 34.615 0.00 0.00 0.00 2.57
2907 6381 6.165577 TCATGTTCTGAATCGATGACTTGAA 58.834 36.000 0.00 3.77 0.00 2.69
2908 6382 5.723295 TCATGTTCTGAATCGATGACTTGA 58.277 37.500 0.00 4.96 0.00 3.02
2909 6383 5.809051 TCTCATGTTCTGAATCGATGACTTG 59.191 40.000 0.00 2.81 32.14 3.16
2910 6384 5.809562 GTCTCATGTTCTGAATCGATGACTT 59.190 40.000 0.00 0.00 32.14 3.01
2911 6385 5.347342 GTCTCATGTTCTGAATCGATGACT 58.653 41.667 0.00 0.00 32.14 3.41
2912 6386 4.205996 CGTCTCATGTTCTGAATCGATGAC 59.794 45.833 0.00 0.00 34.25 3.06
2913 6387 4.354587 CGTCTCATGTTCTGAATCGATGA 58.645 43.478 0.00 2.07 34.25 2.92
2914 6388 3.060674 GCGTCTCATGTTCTGAATCGATG 60.061 47.826 0.00 0.00 34.25 3.84
2915 6389 3.119291 GCGTCTCATGTTCTGAATCGAT 58.881 45.455 0.00 0.00 34.25 3.59
2916 6390 2.530177 GCGTCTCATGTTCTGAATCGA 58.470 47.619 0.00 0.00 34.25 3.59
2917 6391 1.590238 GGCGTCTCATGTTCTGAATCG 59.410 52.381 0.00 0.00 34.95 3.34
2918 6392 1.590238 CGGCGTCTCATGTTCTGAATC 59.410 52.381 0.00 0.00 32.14 2.52
2919 6393 1.204704 TCGGCGTCTCATGTTCTGAAT 59.795 47.619 6.85 0.00 32.14 2.57
2920 6394 0.601057 TCGGCGTCTCATGTTCTGAA 59.399 50.000 6.85 0.00 32.14 3.02
2921 6395 0.109272 GTCGGCGTCTCATGTTCTGA 60.109 55.000 6.85 0.00 0.00 3.27
2922 6396 1.406219 CGTCGGCGTCTCATGTTCTG 61.406 60.000 6.85 0.00 0.00 3.02
2923 6397 1.154016 CGTCGGCGTCTCATGTTCT 60.154 57.895 6.85 0.00 0.00 3.01
2924 6398 2.158959 CCGTCGGCGTCTCATGTTC 61.159 63.158 9.28 0.00 36.15 3.18
2925 6399 2.126071 CCGTCGGCGTCTCATGTT 60.126 61.111 9.28 0.00 36.15 2.71
2926 6400 3.060000 TCCGTCGGCGTCTCATGT 61.060 61.111 9.28 0.00 36.15 3.21
2927 6401 2.579787 GTCCGTCGGCGTCTCATG 60.580 66.667 9.28 0.00 36.15 3.07
2928 6402 3.060000 TGTCCGTCGGCGTCTCAT 61.060 61.111 9.28 0.00 36.15 2.90
2929 6403 4.034258 GTGTCCGTCGGCGTCTCA 62.034 66.667 9.28 1.03 36.15 3.27
2932 6406 4.471726 ATCGTGTCCGTCGGCGTC 62.472 66.667 9.28 0.00 36.15 5.19
2933 6407 4.471726 GATCGTGTCCGTCGGCGT 62.472 66.667 9.28 0.00 36.15 5.68
2934 6408 4.175489 AGATCGTGTCCGTCGGCG 62.175 66.667 6.34 0.29 35.01 6.46
2935 6409 2.579787 CAGATCGTGTCCGTCGGC 60.580 66.667 6.34 2.31 35.01 5.54
2936 6410 1.514228 CACAGATCGTGTCCGTCGG 60.514 63.158 4.39 4.39 41.03 4.79
2937 6411 0.109919 TTCACAGATCGTGTCCGTCG 60.110 55.000 14.43 0.00 46.44 5.12
2938 6412 1.199327 TCTTCACAGATCGTGTCCGTC 59.801 52.381 14.43 0.00 46.44 4.79
2939 6413 1.244816 TCTTCACAGATCGTGTCCGT 58.755 50.000 14.43 0.00 46.44 4.69
2940 6414 2.347697 TTCTTCACAGATCGTGTCCG 57.652 50.000 14.43 7.15 46.44 4.79
2941 6415 4.201628 CGATTTTCTTCACAGATCGTGTCC 60.202 45.833 14.43 0.00 46.44 4.02
2942 6416 4.722346 GCGATTTTCTTCACAGATCGTGTC 60.722 45.833 14.43 5.42 46.44 3.67
2943 6417 3.123621 GCGATTTTCTTCACAGATCGTGT 59.876 43.478 14.43 5.14 46.44 4.49
2945 6419 2.673368 GGCGATTTTCTTCACAGATCGT 59.327 45.455 6.02 0.00 41.05 3.73
2946 6420 2.285256 CGGCGATTTTCTTCACAGATCG 60.285 50.000 0.00 0.00 41.67 3.69
2947 6421 2.537730 GCGGCGATTTTCTTCACAGATC 60.538 50.000 12.98 0.00 0.00 2.75
2948 6422 1.398390 GCGGCGATTTTCTTCACAGAT 59.602 47.619 12.98 0.00 0.00 2.90
2949 6423 0.796312 GCGGCGATTTTCTTCACAGA 59.204 50.000 12.98 0.00 0.00 3.41
2950 6424 0.179189 GGCGGCGATTTTCTTCACAG 60.179 55.000 12.98 0.00 0.00 3.66
2951 6425 1.873165 GGCGGCGATTTTCTTCACA 59.127 52.632 12.98 0.00 0.00 3.58
2952 6426 1.226018 CGGCGGCGATTTTCTTCAC 60.226 57.895 29.19 0.00 0.00 3.18
2953 6427 2.395360 CCGGCGGCGATTTTCTTCA 61.395 57.895 34.49 0.00 0.00 3.02
2954 6428 2.403586 CCGGCGGCGATTTTCTTC 59.596 61.111 34.49 0.00 0.00 2.87
2955 6429 3.810896 GCCGGCGGCGATTTTCTT 61.811 61.111 37.09 0.00 39.62 2.52
2967 6441 2.966309 CTTTTCAGTGTCCGCCGGC 61.966 63.158 19.07 19.07 0.00 6.13
2968 6442 0.673644 ATCTTTTCAGTGTCCGCCGG 60.674 55.000 0.00 0.00 0.00 6.13
2969 6443 0.443869 CATCTTTTCAGTGTCCGCCG 59.556 55.000 0.00 0.00 0.00 6.46
2970 6444 0.169009 GCATCTTTTCAGTGTCCGCC 59.831 55.000 0.00 0.00 0.00 6.13
2971 6445 0.874390 TGCATCTTTTCAGTGTCCGC 59.126 50.000 0.00 0.00 0.00 5.54
2972 6446 2.485426 ACATGCATCTTTTCAGTGTCCG 59.515 45.455 0.00 0.00 0.00 4.79
2973 6447 4.937620 TCTACATGCATCTTTTCAGTGTCC 59.062 41.667 0.00 0.00 0.00 4.02
2974 6448 6.486253 TTCTACATGCATCTTTTCAGTGTC 57.514 37.500 0.00 0.00 0.00 3.67
2975 6449 6.488006 AGTTTCTACATGCATCTTTTCAGTGT 59.512 34.615 0.00 0.00 0.00 3.55
2976 6450 6.906659 AGTTTCTACATGCATCTTTTCAGTG 58.093 36.000 0.00 0.00 0.00 3.66
2977 6451 6.150140 GGAGTTTCTACATGCATCTTTTCAGT 59.850 38.462 0.00 0.00 0.00 3.41
2978 6452 6.149973 TGGAGTTTCTACATGCATCTTTTCAG 59.850 38.462 0.00 0.00 0.00 3.02
2979 6453 6.003326 TGGAGTTTCTACATGCATCTTTTCA 58.997 36.000 0.00 0.00 0.00 2.69
2980 6454 6.500684 TGGAGTTTCTACATGCATCTTTTC 57.499 37.500 0.00 0.00 0.00 2.29
2981 6455 6.899393 TTGGAGTTTCTACATGCATCTTTT 57.101 33.333 0.00 0.00 0.00 2.27
2982 6456 6.716628 TCTTTGGAGTTTCTACATGCATCTTT 59.283 34.615 0.00 0.00 0.00 2.52
2983 6457 6.150140 GTCTTTGGAGTTTCTACATGCATCTT 59.850 38.462 0.00 0.00 0.00 2.40
2984 6458 5.645497 GTCTTTGGAGTTTCTACATGCATCT 59.355 40.000 0.00 0.00 0.00 2.90
2985 6459 5.163713 GGTCTTTGGAGTTTCTACATGCATC 60.164 44.000 0.00 0.00 0.00 3.91
2986 6460 4.702131 GGTCTTTGGAGTTTCTACATGCAT 59.298 41.667 0.00 0.00 0.00 3.96
2987 6461 4.072131 GGTCTTTGGAGTTTCTACATGCA 58.928 43.478 0.00 0.00 0.00 3.96
2988 6462 4.072131 TGGTCTTTGGAGTTTCTACATGC 58.928 43.478 0.00 0.00 0.00 4.06
2989 6463 5.939883 TCATGGTCTTTGGAGTTTCTACATG 59.060 40.000 0.00 0.00 34.80 3.21
2990 6464 6.126863 TCATGGTCTTTGGAGTTTCTACAT 57.873 37.500 0.00 0.00 0.00 2.29
2991 6465 5.560722 TCATGGTCTTTGGAGTTTCTACA 57.439 39.130 0.00 0.00 0.00 2.74
2992 6466 6.877611 TTTCATGGTCTTTGGAGTTTCTAC 57.122 37.500 0.00 0.00 0.00 2.59
2993 6467 6.017440 CGTTTTCATGGTCTTTGGAGTTTCTA 60.017 38.462 0.00 0.00 0.00 2.10
2994 6468 5.221048 CGTTTTCATGGTCTTTGGAGTTTCT 60.221 40.000 0.00 0.00 0.00 2.52
2995 6469 4.976116 CGTTTTCATGGTCTTTGGAGTTTC 59.024 41.667 0.00 0.00 0.00 2.78
2996 6470 4.642885 TCGTTTTCATGGTCTTTGGAGTTT 59.357 37.500 0.00 0.00 0.00 2.66
2997 6471 4.204012 TCGTTTTCATGGTCTTTGGAGTT 58.796 39.130 0.00 0.00 0.00 3.01
2998 6472 3.815401 CTCGTTTTCATGGTCTTTGGAGT 59.185 43.478 0.00 0.00 0.00 3.85
2999 6473 3.815401 ACTCGTTTTCATGGTCTTTGGAG 59.185 43.478 0.00 0.00 0.00 3.86
3000 6474 3.813166 GACTCGTTTTCATGGTCTTTGGA 59.187 43.478 0.00 0.00 0.00 3.53
3001 6475 3.363970 CGACTCGTTTTCATGGTCTTTGG 60.364 47.826 0.00 0.00 0.00 3.28
3002 6476 3.493129 TCGACTCGTTTTCATGGTCTTTG 59.507 43.478 0.00 0.00 0.00 2.77
3003 6477 3.724374 TCGACTCGTTTTCATGGTCTTT 58.276 40.909 0.00 0.00 0.00 2.52
3004 6478 3.380479 TCGACTCGTTTTCATGGTCTT 57.620 42.857 0.00 0.00 0.00 3.01
3005 6479 3.380479 TTCGACTCGTTTTCATGGTCT 57.620 42.857 0.00 0.00 0.00 3.85
3006 6480 3.062234 GGATTCGACTCGTTTTCATGGTC 59.938 47.826 0.00 0.00 0.00 4.02
3007 6481 3.000727 GGATTCGACTCGTTTTCATGGT 58.999 45.455 0.00 0.00 0.00 3.55
3008 6482 3.000041 TGGATTCGACTCGTTTTCATGG 59.000 45.455 0.00 0.00 0.00 3.66
3009 6483 3.926527 TCTGGATTCGACTCGTTTTCATG 59.073 43.478 0.00 0.00 0.00 3.07
3010 6484 4.188247 TCTGGATTCGACTCGTTTTCAT 57.812 40.909 0.00 0.00 0.00 2.57
3011 6485 3.653539 TCTGGATTCGACTCGTTTTCA 57.346 42.857 0.00 0.00 0.00 2.69
3012 6486 3.307242 CCATCTGGATTCGACTCGTTTTC 59.693 47.826 0.00 0.00 37.39 2.29
3013 6487 3.056107 TCCATCTGGATTCGACTCGTTTT 60.056 43.478 0.00 0.00 39.78 2.43
3014 6488 2.496070 TCCATCTGGATTCGACTCGTTT 59.504 45.455 0.00 0.00 39.78 3.60
3015 6489 2.100197 TCCATCTGGATTCGACTCGTT 58.900 47.619 0.00 0.00 39.78 3.85
3016 6490 1.763968 TCCATCTGGATTCGACTCGT 58.236 50.000 0.00 0.00 39.78 4.18
3027 6501 3.019564 GGTTTTCAGTGGATCCATCTGG 58.980 50.000 28.81 16.78 0.00 3.86
3028 6502 3.689347 TGGTTTTCAGTGGATCCATCTG 58.311 45.455 26.09 26.09 0.00 2.90
3029 6503 4.387026 TTGGTTTTCAGTGGATCCATCT 57.613 40.909 19.62 13.95 0.00 2.90
3030 6504 5.467035 TTTTGGTTTTCAGTGGATCCATC 57.533 39.130 19.62 11.77 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.