Multiple sequence alignment - TraesCS3B01G451000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G451000 chr3B 100.000 6228 0 0 1 6228 691451436 691457663 0.000000e+00 11502.0
1 TraesCS3B01G451000 chr3B 95.652 138 6 0 4953 5090 798993525 798993662 8.130000e-54 222.0
2 TraesCS3B01G451000 chr3D 92.539 4383 197 49 653 4937 524208814 524204464 0.000000e+00 6163.0
3 TraesCS3B01G451000 chr3D 92.135 1157 55 16 5093 6228 524204429 524203288 0.000000e+00 1600.0
4 TraesCS3B01G451000 chr3D 80.899 267 32 11 1518 1777 37064891 37065145 6.370000e-45 193.0
5 TraesCS3B01G451000 chr3D 88.462 52 6 0 432 483 13433315 13433366 5.210000e-06 63.9
6 TraesCS3B01G451000 chr3A 91.391 4542 225 77 494 4941 658836295 658840764 0.000000e+00 6069.0
7 TraesCS3B01G451000 chr3A 89.724 1197 74 22 5075 6228 658840837 658842027 0.000000e+00 1483.0
8 TraesCS3B01G451000 chr3A 90.854 164 10 5 4932 5093 657422634 657422794 1.360000e-51 215.0
9 TraesCS3B01G451000 chr3A 91.558 154 10 3 4936 5087 644820374 644820526 6.330000e-50 209.0
10 TraesCS3B01G451000 chr3A 79.577 142 20 2 5096 5228 658841070 658841211 6.650000e-15 93.5
11 TraesCS3B01G451000 chr3A 79.130 115 18 5 360 470 111822866 111822754 2.410000e-09 75.0
12 TraesCS3B01G451000 chr5B 88.674 1501 105 26 3233 4689 60880978 60882457 0.000000e+00 1770.0
13 TraesCS3B01G451000 chr5B 95.714 140 4 2 4953 5091 555175729 555175591 2.260000e-54 224.0
14 TraesCS3B01G451000 chr5B 95.683 139 5 1 4945 5083 659820420 659820557 8.130000e-54 222.0
15 TraesCS3B01G451000 chr5B 94.565 92 4 1 3639 3729 102210872 102210963 2.340000e-29 141.0
16 TraesCS3B01G451000 chr5B 93.023 43 3 0 359 401 399178490 399178448 5.210000e-06 63.9
17 TraesCS3B01G451000 chr7D 92.089 632 32 5 2859 3475 46896975 46897603 0.000000e+00 874.0
18 TraesCS3B01G451000 chr7D 80.119 337 36 15 4084 4417 37118775 37119083 8.130000e-54 222.0
19 TraesCS3B01G451000 chr7D 78.909 275 38 10 1523 1785 501004886 501005152 1.070000e-37 169.0
20 TraesCS3B01G451000 chr5D 84.535 860 94 14 3511 4364 514542499 514541673 0.000000e+00 815.0
21 TraesCS3B01G451000 chr5D 83.778 863 101 13 3508 4364 357399202 357400031 0.000000e+00 782.0
22 TraesCS3B01G451000 chr5D 79.808 104 17 3 359 459 310027412 310027310 8.660000e-09 73.1
23 TraesCS3B01G451000 chr1D 83.662 863 102 14 3508 4364 311363628 311364457 0.000000e+00 776.0
24 TraesCS3B01G451000 chr1D 76.589 299 45 17 1518 1798 22477870 22477579 2.340000e-29 141.0
25 TraesCS3B01G451000 chr1A 83.624 861 101 15 3511 4364 417344144 417343317 0.000000e+00 773.0
26 TraesCS3B01G451000 chr1A 82.941 510 57 10 3068 3572 556662316 556662800 3.450000e-117 433.0
27 TraesCS3B01G451000 chr1A 78.322 286 49 11 1518 1798 452747989 452748266 8.300000e-39 172.0
28 TraesCS3B01G451000 chr7A 82.488 651 80 11 3719 4364 474050013 474050634 1.980000e-149 540.0
29 TraesCS3B01G451000 chrUn 85.714 350 38 6 3643 3984 48562039 48561694 5.940000e-95 359.0
30 TraesCS3B01G451000 chrUn 96.377 138 4 1 4953 5090 322720536 322720400 6.280000e-55 226.0
31 TraesCS3B01G451000 chrUn 79.939 329 40 14 4091 4417 48540613 48540309 1.050000e-52 219.0
32 TraesCS3B01G451000 chr1B 87.368 285 29 3 3508 3792 640436238 640436515 2.800000e-83 320.0
33 TraesCS3B01G451000 chr1B 96.850 127 4 0 4953 5079 623397436 623397562 4.890000e-51 213.0
34 TraesCS3B01G451000 chr6B 96.479 142 4 1 4950 5091 172239628 172239768 3.750000e-57 233.0
35 TraesCS3B01G451000 chr6B 100.000 30 0 0 433 462 603896438 603896409 8.720000e-04 56.5
36 TraesCS3B01G451000 chr4B 95.620 137 5 1 4943 5079 82019113 82019248 1.050000e-52 219.0
37 TraesCS3B01G451000 chr5A 76.490 302 40 15 1599 1874 631505852 631505556 1.090000e-27 135.0
38 TraesCS3B01G451000 chr2A 77.551 245 39 9 1553 1791 239386212 239386446 3.920000e-27 134.0
39 TraesCS3B01G451000 chr2B 85.859 99 7 5 1616 1709 18845921 18846017 1.430000e-16 99.0
40 TraesCS3B01G451000 chr2B 84.848 99 8 4 1616 1709 18981080 18980984 6.650000e-15 93.5
41 TraesCS3B01G451000 chr7B 92.453 53 3 1 433 485 502671344 502671293 2.410000e-09 75.0
42 TraesCS3B01G451000 chr2D 87.719 57 7 0 433 489 642814405 642814461 4.030000e-07 67.6
43 TraesCS3B01G451000 chr2D 85.246 61 9 0 432 492 461798177 461798117 5.210000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G451000 chr3B 691451436 691457663 6227 False 11502.0 11502 100.000000 1 6228 1 chr3B.!!$F1 6227
1 TraesCS3B01G451000 chr3D 524203288 524208814 5526 True 3881.5 6163 92.337000 653 6228 2 chr3D.!!$R1 5575
2 TraesCS3B01G451000 chr3A 658836295 658842027 5732 False 2548.5 6069 86.897333 494 6228 3 chr3A.!!$F3 5734
3 TraesCS3B01G451000 chr5B 60880978 60882457 1479 False 1770.0 1770 88.674000 3233 4689 1 chr5B.!!$F1 1456
4 TraesCS3B01G451000 chr7D 46896975 46897603 628 False 874.0 874 92.089000 2859 3475 1 chr7D.!!$F2 616
5 TraesCS3B01G451000 chr5D 514541673 514542499 826 True 815.0 815 84.535000 3511 4364 1 chr5D.!!$R2 853
6 TraesCS3B01G451000 chr5D 357399202 357400031 829 False 782.0 782 83.778000 3508 4364 1 chr5D.!!$F1 856
7 TraesCS3B01G451000 chr1D 311363628 311364457 829 False 776.0 776 83.662000 3508 4364 1 chr1D.!!$F1 856
8 TraesCS3B01G451000 chr1A 417343317 417344144 827 True 773.0 773 83.624000 3511 4364 1 chr1A.!!$R1 853
9 TraesCS3B01G451000 chr7A 474050013 474050634 621 False 540.0 540 82.488000 3719 4364 1 chr7A.!!$F1 645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
401 402 0.044855 AGGAGGGCAGTGGTATTCCT 59.955 55.000 0.00 0.00 34.23 3.36 F
421 422 0.104120 AAACCGCCAAAGTTGAAGCC 59.896 50.000 0.00 0.00 0.00 4.35 F
634 641 0.384974 AAAAATACGTGCGTGCCGTG 60.385 50.000 15.35 0.00 39.22 4.94 F
720 727 2.027625 CCGCCCGTTGTCTCTTCAC 61.028 63.158 0.00 0.00 0.00 3.18 F
722 729 2.027625 GCCCGTTGTCTCTTCACCG 61.028 63.158 0.00 0.00 0.00 4.94 F
936 951 2.047655 CGGAAGCCGTGCCAGTAA 60.048 61.111 0.00 0.00 42.73 2.24 F
2271 2342 0.324645 ATTTCGGCTTCAATGGGCCT 60.325 50.000 4.53 0.00 45.57 5.19 F
3498 3614 0.464735 TGCGGTGGCGGCTAATTATT 60.465 50.000 11.43 0.00 44.10 1.40 F
3578 3700 0.110486 TGACTTTGGGAGGCTGAACC 59.890 55.000 0.00 0.00 33.09 3.62 F
4028 4162 1.807165 GCAGTGCGATCGCTCTTGA 60.807 57.895 34.77 16.74 42.15 3.02 F
4971 5195 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1403 1426 0.389296 TATGCACGAACGGAGTGGTG 60.389 55.000 8.76 2.43 45.00 4.17 R
1405 1428 0.930310 CATATGCACGAACGGAGTGG 59.070 55.000 8.76 0.00 45.00 4.00 R
1466 1497 1.716050 CTGTGAGACGACACGATGTTG 59.284 52.381 0.00 0.00 42.86 3.33 R
2212 2283 2.849880 TGTGCAAAAAGTGAGCTGAC 57.150 45.000 0.00 0.00 0.00 3.51 R
2271 2342 6.999950 TCATAATATGCTTTCGGCCTAGTTA 58.000 36.000 0.00 0.00 40.92 2.24 R
2870 2964 1.459209 CGCAAGTGAACGAGCAATACA 59.541 47.619 0.00 0.00 0.00 2.29 R
3504 3620 0.317854 GTGCAGGAACAAGCCGTTTC 60.318 55.000 0.00 0.00 38.19 2.78 R
4952 5176 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59 R
4955 5179 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R
5062 5286 0.038744 AGGTACTTCCTCCGTCCGAA 59.961 55.000 0.00 0.00 44.42 4.30 R
5822 6075 0.396139 GCTCATGCCTTCCCCATTGA 60.396 55.000 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.730296 TGAGAAAGAAACACAAAAACCCA 57.270 34.783 0.00 0.00 0.00 4.51
23 24 6.102897 TGAGAAAGAAACACAAAAACCCAA 57.897 33.333 0.00 0.00 0.00 4.12
24 25 6.525629 TGAGAAAGAAACACAAAAACCCAAA 58.474 32.000 0.00 0.00 0.00 3.28
25 26 7.164803 TGAGAAAGAAACACAAAAACCCAAAT 58.835 30.769 0.00 0.00 0.00 2.32
26 27 7.663493 TGAGAAAGAAACACAAAAACCCAAATT 59.337 29.630 0.00 0.00 0.00 1.82
27 28 9.157104 GAGAAAGAAACACAAAAACCCAAATTA 57.843 29.630 0.00 0.00 0.00 1.40
28 29 9.508642 AGAAAGAAACACAAAAACCCAAATTAA 57.491 25.926 0.00 0.00 0.00 1.40
80 81 8.926715 TCTAAAGAAAAAGAAACAAAGAAGCC 57.073 30.769 0.00 0.00 0.00 4.35
81 82 6.985188 AAAGAAAAAGAAACAAAGAAGCCC 57.015 33.333 0.00 0.00 0.00 5.19
82 83 4.682787 AGAAAAAGAAACAAAGAAGCCCG 58.317 39.130 0.00 0.00 0.00 6.13
83 84 4.401202 AGAAAAAGAAACAAAGAAGCCCGA 59.599 37.500 0.00 0.00 0.00 5.14
84 85 4.937201 AAAAGAAACAAAGAAGCCCGAT 57.063 36.364 0.00 0.00 0.00 4.18
85 86 3.923017 AAGAAACAAAGAAGCCCGATG 57.077 42.857 0.00 0.00 0.00 3.84
86 87 3.140325 AGAAACAAAGAAGCCCGATGA 57.860 42.857 0.00 0.00 0.00 2.92
87 88 3.486383 AGAAACAAAGAAGCCCGATGAA 58.514 40.909 0.00 0.00 0.00 2.57
88 89 3.888930 AGAAACAAAGAAGCCCGATGAAA 59.111 39.130 0.00 0.00 0.00 2.69
89 90 4.340950 AGAAACAAAGAAGCCCGATGAAAA 59.659 37.500 0.00 0.00 0.00 2.29
90 91 4.664150 AACAAAGAAGCCCGATGAAAAA 57.336 36.364 0.00 0.00 0.00 1.94
91 92 3.977427 ACAAAGAAGCCCGATGAAAAAC 58.023 40.909 0.00 0.00 0.00 2.43
92 93 3.383185 ACAAAGAAGCCCGATGAAAAACA 59.617 39.130 0.00 0.00 0.00 2.83
93 94 4.142049 ACAAAGAAGCCCGATGAAAAACAA 60.142 37.500 0.00 0.00 0.00 2.83
94 95 4.664150 AAGAAGCCCGATGAAAAACAAA 57.336 36.364 0.00 0.00 0.00 2.83
95 96 4.243007 AGAAGCCCGATGAAAAACAAAG 57.757 40.909 0.00 0.00 0.00 2.77
96 97 3.888930 AGAAGCCCGATGAAAAACAAAGA 59.111 39.130 0.00 0.00 0.00 2.52
97 98 4.340950 AGAAGCCCGATGAAAAACAAAGAA 59.659 37.500 0.00 0.00 0.00 2.52
98 99 4.664150 AGCCCGATGAAAAACAAAGAAA 57.336 36.364 0.00 0.00 0.00 2.52
99 100 5.017294 AGCCCGATGAAAAACAAAGAAAA 57.983 34.783 0.00 0.00 0.00 2.29
100 101 5.423886 AGCCCGATGAAAAACAAAGAAAAA 58.576 33.333 0.00 0.00 0.00 1.94
101 102 5.293324 AGCCCGATGAAAAACAAAGAAAAAC 59.707 36.000 0.00 0.00 0.00 2.43
102 103 5.064071 GCCCGATGAAAAACAAAGAAAAACA 59.936 36.000 0.00 0.00 0.00 2.83
103 104 6.704819 CCCGATGAAAAACAAAGAAAAACAG 58.295 36.000 0.00 0.00 0.00 3.16
104 105 6.312672 CCCGATGAAAAACAAAGAAAAACAGT 59.687 34.615 0.00 0.00 0.00 3.55
105 106 7.172757 CCGATGAAAAACAAAGAAAAACAGTG 58.827 34.615 0.00 0.00 0.00 3.66
106 107 7.062839 CCGATGAAAAACAAAGAAAAACAGTGA 59.937 33.333 0.00 0.00 0.00 3.41
107 108 8.431593 CGATGAAAAACAAAGAAAAACAGTGAA 58.568 29.630 0.00 0.00 0.00 3.18
108 109 9.745323 GATGAAAAACAAAGAAAAACAGTGAAG 57.255 29.630 0.00 0.00 0.00 3.02
109 110 8.879342 TGAAAAACAAAGAAAAACAGTGAAGA 57.121 26.923 0.00 0.00 0.00 2.87
110 111 9.319143 TGAAAAACAAAGAAAAACAGTGAAGAA 57.681 25.926 0.00 0.00 0.00 2.52
113 114 9.541143 AAAACAAAGAAAAACAGTGAAGAAAGA 57.459 25.926 0.00 0.00 0.00 2.52
114 115 9.541143 AAACAAAGAAAAACAGTGAAGAAAGAA 57.459 25.926 0.00 0.00 0.00 2.52
115 116 9.541143 AACAAAGAAAAACAGTGAAGAAAGAAA 57.459 25.926 0.00 0.00 0.00 2.52
116 117 9.541143 ACAAAGAAAAACAGTGAAGAAAGAAAA 57.459 25.926 0.00 0.00 0.00 2.29
118 119 9.981114 AAAGAAAAACAGTGAAGAAAGAAAAGA 57.019 25.926 0.00 0.00 0.00 2.52
119 120 9.981114 AAGAAAAACAGTGAAGAAAGAAAAGAA 57.019 25.926 0.00 0.00 0.00 2.52
120 121 9.631452 AGAAAAACAGTGAAGAAAGAAAAGAAG 57.369 29.630 0.00 0.00 0.00 2.85
121 122 7.818493 AAAACAGTGAAGAAAGAAAAGAAGC 57.182 32.000 0.00 0.00 0.00 3.86
122 123 5.506686 ACAGTGAAGAAAGAAAAGAAGCC 57.493 39.130 0.00 0.00 0.00 4.35
123 124 5.196695 ACAGTGAAGAAAGAAAAGAAGCCT 58.803 37.500 0.00 0.00 0.00 4.58
124 125 5.067023 ACAGTGAAGAAAGAAAAGAAGCCTG 59.933 40.000 0.00 0.00 0.00 4.85
125 126 5.297776 CAGTGAAGAAAGAAAAGAAGCCTGA 59.702 40.000 0.00 0.00 0.00 3.86
126 127 6.016443 CAGTGAAGAAAGAAAAGAAGCCTGAT 60.016 38.462 0.00 0.00 0.00 2.90
127 128 6.548993 AGTGAAGAAAGAAAAGAAGCCTGATT 59.451 34.615 0.00 0.00 0.00 2.57
128 129 7.721399 AGTGAAGAAAGAAAAGAAGCCTGATTA 59.279 33.333 0.00 0.00 0.00 1.75
129 130 8.518702 GTGAAGAAAGAAAAGAAGCCTGATTAT 58.481 33.333 0.00 0.00 0.00 1.28
130 131 9.082313 TGAAGAAAGAAAAGAAGCCTGATTATT 57.918 29.630 0.00 0.00 0.00 1.40
131 132 9.920133 GAAGAAAGAAAAGAAGCCTGATTATTT 57.080 29.630 0.00 0.00 0.00 1.40
155 156 7.428282 TTTTGAAGAAAACCAGACAAAAACC 57.572 32.000 0.00 0.00 35.39 3.27
156 157 5.730296 TGAAGAAAACCAGACAAAAACCA 57.270 34.783 0.00 0.00 0.00 3.67
157 158 6.102897 TGAAGAAAACCAGACAAAAACCAA 57.897 33.333 0.00 0.00 0.00 3.67
158 159 5.929415 TGAAGAAAACCAGACAAAAACCAAC 59.071 36.000 0.00 0.00 0.00 3.77
159 160 5.476091 AGAAAACCAGACAAAAACCAACA 57.524 34.783 0.00 0.00 0.00 3.33
160 161 6.048732 AGAAAACCAGACAAAAACCAACAT 57.951 33.333 0.00 0.00 0.00 2.71
161 162 6.472016 AGAAAACCAGACAAAAACCAACATT 58.528 32.000 0.00 0.00 0.00 2.71
162 163 7.616313 AGAAAACCAGACAAAAACCAACATTA 58.384 30.769 0.00 0.00 0.00 1.90
163 164 8.097662 AGAAAACCAGACAAAAACCAACATTAA 58.902 29.630 0.00 0.00 0.00 1.40
164 165 7.841915 AAACCAGACAAAAACCAACATTAAG 57.158 32.000 0.00 0.00 0.00 1.85
165 166 6.783708 ACCAGACAAAAACCAACATTAAGA 57.216 33.333 0.00 0.00 0.00 2.10
166 167 7.360113 ACCAGACAAAAACCAACATTAAGAT 57.640 32.000 0.00 0.00 0.00 2.40
167 168 7.209475 ACCAGACAAAAACCAACATTAAGATG 58.791 34.615 0.00 0.00 39.25 2.90
168 169 7.069331 ACCAGACAAAAACCAACATTAAGATGA 59.931 33.333 0.00 0.00 36.73 2.92
169 170 7.596248 CCAGACAAAAACCAACATTAAGATGAG 59.404 37.037 0.00 0.00 36.73 2.90
170 171 8.352201 CAGACAAAAACCAACATTAAGATGAGA 58.648 33.333 0.00 0.00 36.73 3.27
171 172 8.912988 AGACAAAAACCAACATTAAGATGAGAA 58.087 29.630 0.00 0.00 36.73 2.87
172 173 9.528018 GACAAAAACCAACATTAAGATGAGAAA 57.472 29.630 0.00 0.00 36.73 2.52
173 174 9.883142 ACAAAAACCAACATTAAGATGAGAAAA 57.117 25.926 0.00 0.00 36.73 2.29
175 176 8.887036 AAAACCAACATTAAGATGAGAAAACC 57.113 30.769 0.00 0.00 36.73 3.27
176 177 7.595819 AACCAACATTAAGATGAGAAAACCA 57.404 32.000 0.00 0.00 36.73 3.67
177 178 7.595819 ACCAACATTAAGATGAGAAAACCAA 57.404 32.000 0.00 0.00 36.73 3.67
178 179 7.433680 ACCAACATTAAGATGAGAAAACCAAC 58.566 34.615 0.00 0.00 36.73 3.77
179 180 7.069331 ACCAACATTAAGATGAGAAAACCAACA 59.931 33.333 0.00 0.00 36.73 3.33
180 181 7.925483 CCAACATTAAGATGAGAAAACCAACAA 59.075 33.333 0.00 0.00 36.73 2.83
181 182 8.755018 CAACATTAAGATGAGAAAACCAACAAC 58.245 33.333 0.00 0.00 36.73 3.32
182 183 7.138736 ACATTAAGATGAGAAAACCAACAACG 58.861 34.615 0.00 0.00 36.73 4.10
183 184 6.928979 TTAAGATGAGAAAACCAACAACGA 57.071 33.333 0.00 0.00 0.00 3.85
184 185 5.424121 AAGATGAGAAAACCAACAACGAG 57.576 39.130 0.00 0.00 0.00 4.18
185 186 4.451900 AGATGAGAAAACCAACAACGAGT 58.548 39.130 0.00 0.00 0.00 4.18
186 187 4.881850 AGATGAGAAAACCAACAACGAGTT 59.118 37.500 0.00 0.00 42.42 3.01
187 188 4.609691 TGAGAAAACCAACAACGAGTTC 57.390 40.909 0.00 0.00 38.74 3.01
188 189 4.004314 TGAGAAAACCAACAACGAGTTCA 58.996 39.130 0.00 0.00 38.74 3.18
189 190 4.456222 TGAGAAAACCAACAACGAGTTCAA 59.544 37.500 0.00 0.00 38.74 2.69
190 191 5.124776 TGAGAAAACCAACAACGAGTTCAAT 59.875 36.000 0.00 0.00 38.74 2.57
191 192 5.578776 AGAAAACCAACAACGAGTTCAATC 58.421 37.500 0.00 0.00 38.74 2.67
193 194 2.828877 ACCAACAACGAGTTCAATCGA 58.171 42.857 3.31 0.00 45.56 3.59
194 195 3.199677 ACCAACAACGAGTTCAATCGAA 58.800 40.909 3.31 0.00 45.56 3.71
195 196 3.623960 ACCAACAACGAGTTCAATCGAAA 59.376 39.130 3.31 0.00 45.56 3.46
196 197 4.095185 ACCAACAACGAGTTCAATCGAAAA 59.905 37.500 3.31 0.00 45.56 2.29
197 198 4.436523 CCAACAACGAGTTCAATCGAAAAC 59.563 41.667 3.31 0.00 45.56 2.43
198 199 4.205323 ACAACGAGTTCAATCGAAAACC 57.795 40.909 3.31 0.00 45.56 3.27
199 200 3.875134 ACAACGAGTTCAATCGAAAACCT 59.125 39.130 3.31 0.00 45.56 3.50
200 201 5.051816 ACAACGAGTTCAATCGAAAACCTA 58.948 37.500 3.31 0.00 45.56 3.08
201 202 5.176958 ACAACGAGTTCAATCGAAAACCTAG 59.823 40.000 3.31 0.00 45.56 3.02
202 203 5.130292 ACGAGTTCAATCGAAAACCTAGA 57.870 39.130 3.31 0.00 45.56 2.43
203 204 5.162075 ACGAGTTCAATCGAAAACCTAGAG 58.838 41.667 3.31 0.00 45.56 2.43
204 205 5.048224 ACGAGTTCAATCGAAAACCTAGAGA 60.048 40.000 3.31 0.00 45.56 3.10
205 206 5.862323 CGAGTTCAATCGAAAACCTAGAGAA 59.138 40.000 0.00 0.00 45.56 2.87
206 207 6.183359 CGAGTTCAATCGAAAACCTAGAGAAC 60.183 42.308 0.00 0.00 45.56 3.01
207 208 6.522054 AGTTCAATCGAAAACCTAGAGAACA 58.478 36.000 0.00 0.00 36.29 3.18
208 209 6.990349 AGTTCAATCGAAAACCTAGAGAACAA 59.010 34.615 0.00 0.00 36.29 2.83
209 210 7.171678 AGTTCAATCGAAAACCTAGAGAACAAG 59.828 37.037 0.00 0.00 36.29 3.16
210 211 6.755206 TCAATCGAAAACCTAGAGAACAAGA 58.245 36.000 0.00 0.00 0.00 3.02
211 212 7.214381 TCAATCGAAAACCTAGAGAACAAGAA 58.786 34.615 0.00 0.00 0.00 2.52
212 213 7.713507 TCAATCGAAAACCTAGAGAACAAGAAA 59.286 33.333 0.00 0.00 0.00 2.52
213 214 8.342634 CAATCGAAAACCTAGAGAACAAGAAAA 58.657 33.333 0.00 0.00 0.00 2.29
214 215 7.852971 TCGAAAACCTAGAGAACAAGAAAAA 57.147 32.000 0.00 0.00 0.00 1.94
232 233 4.499037 AAAAACAGACTAAATGGTCCGC 57.501 40.909 0.00 0.00 36.95 5.54
233 234 2.109425 AACAGACTAAATGGTCCGCC 57.891 50.000 0.00 0.00 36.95 6.13
234 235 0.252197 ACAGACTAAATGGTCCGCCC 59.748 55.000 0.00 0.00 36.95 6.13
235 236 0.463833 CAGACTAAATGGTCCGCCCC 60.464 60.000 0.00 0.00 36.95 5.80
236 237 0.912487 AGACTAAATGGTCCGCCCCA 60.912 55.000 0.00 0.00 39.27 4.96
237 238 0.463833 GACTAAATGGTCCGCCCCAG 60.464 60.000 0.00 0.00 38.07 4.45
238 239 1.205460 ACTAAATGGTCCGCCCCAGT 61.205 55.000 0.00 0.00 38.07 4.00
239 240 0.834612 CTAAATGGTCCGCCCCAGTA 59.165 55.000 0.00 0.00 38.07 2.74
240 241 1.420138 CTAAATGGTCCGCCCCAGTAT 59.580 52.381 0.00 0.00 38.07 2.12
241 242 0.106719 AAATGGTCCGCCCCAGTATG 60.107 55.000 0.00 0.00 38.07 2.39
242 243 2.624674 AATGGTCCGCCCCAGTATGC 62.625 60.000 0.00 0.00 38.07 3.14
243 244 3.480133 GGTCCGCCCCAGTATGCT 61.480 66.667 0.00 0.00 31.97 3.79
244 245 2.109181 GTCCGCCCCAGTATGCTC 59.891 66.667 0.00 0.00 31.97 4.26
245 246 3.536917 TCCGCCCCAGTATGCTCG 61.537 66.667 0.00 0.00 31.97 5.03
248 249 4.530857 GCCCCAGTATGCTCGCGT 62.531 66.667 5.77 0.00 31.97 6.01
249 250 2.586079 CCCCAGTATGCTCGCGTG 60.586 66.667 5.77 4.44 31.97 5.34
250 251 2.586079 CCCAGTATGCTCGCGTGG 60.586 66.667 5.77 4.05 31.97 4.94
251 252 3.264897 CCAGTATGCTCGCGTGGC 61.265 66.667 16.91 16.91 31.97 5.01
252 253 2.509111 CAGTATGCTCGCGTGGCA 60.509 61.111 25.06 25.06 44.05 4.92
253 254 2.202797 AGTATGCTCGCGTGGCAG 60.203 61.111 26.16 11.14 43.15 4.85
254 255 2.202743 GTATGCTCGCGTGGCAGA 60.203 61.111 26.16 21.70 43.15 4.26
255 256 1.809619 GTATGCTCGCGTGGCAGAA 60.810 57.895 26.16 17.60 43.15 3.02
256 257 1.143838 TATGCTCGCGTGGCAGAAT 59.856 52.632 26.16 16.51 43.15 2.40
257 258 0.387565 TATGCTCGCGTGGCAGAATA 59.612 50.000 26.16 15.73 43.15 1.75
258 259 0.461870 ATGCTCGCGTGGCAGAATAA 60.462 50.000 26.16 9.27 43.15 1.40
259 260 1.348594 GCTCGCGTGGCAGAATAAC 59.651 57.895 18.31 0.00 0.00 1.89
260 261 1.631072 CTCGCGTGGCAGAATAACG 59.369 57.895 5.77 0.00 40.22 3.18
261 262 1.076533 CTCGCGTGGCAGAATAACGT 61.077 55.000 5.77 0.00 39.45 3.99
262 263 1.058748 CGCGTGGCAGAATAACGTG 59.941 57.895 0.00 0.00 40.82 4.49
263 264 1.623081 CGCGTGGCAGAATAACGTGT 61.623 55.000 0.00 0.00 41.54 4.49
264 265 1.352114 GCGTGGCAGAATAACGTGTA 58.648 50.000 0.00 0.00 39.45 2.90
265 266 1.323534 GCGTGGCAGAATAACGTGTAG 59.676 52.381 0.00 0.00 39.45 2.74
266 267 1.323534 CGTGGCAGAATAACGTGTAGC 59.676 52.381 0.00 0.00 32.79 3.58
268 269 1.202817 TGGCAGAATAACGTGTAGCGA 59.797 47.619 0.00 0.00 44.77 4.93
269 270 1.852895 GGCAGAATAACGTGTAGCGAG 59.147 52.381 0.00 0.00 44.77 5.03
270 271 2.479049 GGCAGAATAACGTGTAGCGAGA 60.479 50.000 0.00 0.00 44.77 4.04
271 272 3.372954 GCAGAATAACGTGTAGCGAGAT 58.627 45.455 0.00 0.00 44.77 2.75
272 273 3.180584 GCAGAATAACGTGTAGCGAGATG 59.819 47.826 0.00 0.00 44.77 2.90
273 274 3.731216 CAGAATAACGTGTAGCGAGATGG 59.269 47.826 0.00 0.00 44.77 3.51
274 275 2.795175 ATAACGTGTAGCGAGATGGG 57.205 50.000 0.00 0.00 44.77 4.00
275 276 1.466856 TAACGTGTAGCGAGATGGGT 58.533 50.000 0.00 0.00 44.77 4.51
276 277 0.108804 AACGTGTAGCGAGATGGGTG 60.109 55.000 0.00 0.00 44.77 4.61
277 278 1.248785 ACGTGTAGCGAGATGGGTGT 61.249 55.000 0.00 0.00 44.77 4.16
278 279 0.736636 CGTGTAGCGAGATGGGTGTA 59.263 55.000 0.00 0.00 44.77 2.90
279 280 1.268589 CGTGTAGCGAGATGGGTGTAG 60.269 57.143 0.00 0.00 44.77 2.74
280 281 1.749634 GTGTAGCGAGATGGGTGTAGT 59.250 52.381 0.00 0.00 0.00 2.73
281 282 2.165845 GTGTAGCGAGATGGGTGTAGTT 59.834 50.000 0.00 0.00 0.00 2.24
282 283 2.426024 TGTAGCGAGATGGGTGTAGTTC 59.574 50.000 0.00 0.00 0.00 3.01
283 284 1.853963 AGCGAGATGGGTGTAGTTCT 58.146 50.000 0.00 0.00 0.00 3.01
284 285 1.751924 AGCGAGATGGGTGTAGTTCTC 59.248 52.381 0.00 0.00 32.97 2.87
286 287 2.211353 GAGATGGGTGTAGTTCTCGC 57.789 55.000 0.00 0.00 0.00 5.03
287 288 0.456221 AGATGGGTGTAGTTCTCGCG 59.544 55.000 0.00 0.00 0.00 5.87
288 289 0.454600 GATGGGTGTAGTTCTCGCGA 59.545 55.000 9.26 9.26 0.00 5.87
289 290 0.892755 ATGGGTGTAGTTCTCGCGAA 59.107 50.000 11.33 0.00 0.00 4.70
290 291 0.675083 TGGGTGTAGTTCTCGCGAAA 59.325 50.000 11.33 4.88 0.00 3.46
291 292 1.068895 TGGGTGTAGTTCTCGCGAAAA 59.931 47.619 11.33 0.00 0.00 2.29
292 293 2.137523 GGGTGTAGTTCTCGCGAAAAA 58.862 47.619 11.33 4.71 0.00 1.94
293 294 2.157085 GGGTGTAGTTCTCGCGAAAAAG 59.843 50.000 11.33 0.00 0.00 2.27
294 295 3.054878 GGTGTAGTTCTCGCGAAAAAGA 58.945 45.455 11.33 0.00 0.00 2.52
295 296 3.492011 GGTGTAGTTCTCGCGAAAAAGAA 59.508 43.478 11.33 7.40 0.00 2.52
296 297 4.025480 GGTGTAGTTCTCGCGAAAAAGAAA 60.025 41.667 11.33 0.00 33.53 2.52
297 298 5.333875 GGTGTAGTTCTCGCGAAAAAGAAAT 60.334 40.000 11.33 11.96 33.53 2.17
298 299 6.128742 GGTGTAGTTCTCGCGAAAAAGAAATA 60.129 38.462 11.33 10.90 33.53 1.40
299 300 6.731062 GTGTAGTTCTCGCGAAAAAGAAATAC 59.269 38.462 26.20 26.20 45.93 1.89
300 301 6.643770 TGTAGTTCTCGCGAAAAAGAAATACT 59.356 34.615 29.53 18.73 45.92 2.12
301 302 5.916969 AGTTCTCGCGAAAAAGAAATACTG 58.083 37.500 11.33 0.00 33.53 2.74
302 303 4.322101 TCTCGCGAAAAAGAAATACTGC 57.678 40.909 11.33 0.00 0.00 4.40
303 304 3.994392 TCTCGCGAAAAAGAAATACTGCT 59.006 39.130 11.33 0.00 0.00 4.24
304 305 4.065423 TCGCGAAAAAGAAATACTGCTG 57.935 40.909 6.20 0.00 0.00 4.41
305 306 3.743911 TCGCGAAAAAGAAATACTGCTGA 59.256 39.130 6.20 0.00 0.00 4.26
306 307 4.212425 TCGCGAAAAAGAAATACTGCTGAA 59.788 37.500 6.20 0.00 0.00 3.02
307 308 4.909305 CGCGAAAAAGAAATACTGCTGAAA 59.091 37.500 0.00 0.00 0.00 2.69
308 309 5.398122 CGCGAAAAAGAAATACTGCTGAAAA 59.602 36.000 0.00 0.00 0.00 2.29
309 310 6.088085 CGCGAAAAAGAAATACTGCTGAAAAT 59.912 34.615 0.00 0.00 0.00 1.82
310 311 7.270365 CGCGAAAAAGAAATACTGCTGAAAATA 59.730 33.333 0.00 0.00 0.00 1.40
311 312 8.911662 GCGAAAAAGAAATACTGCTGAAAATAA 58.088 29.630 0.00 0.00 0.00 1.40
324 325 9.630098 ACTGCTGAAAATAAAATGAAGTACATG 57.370 29.630 0.00 0.00 39.39 3.21
325 326 9.630098 CTGCTGAAAATAAAATGAAGTACATGT 57.370 29.630 2.69 2.69 39.39 3.21
326 327 9.409312 TGCTGAAAATAAAATGAAGTACATGTG 57.591 29.630 9.11 0.00 39.39 3.21
327 328 9.410556 GCTGAAAATAAAATGAAGTACATGTGT 57.589 29.630 9.11 0.00 39.39 3.72
329 330 9.190858 TGAAAATAAAATGAAGTACATGTGTGC 57.809 29.630 9.11 0.00 39.39 4.57
330 331 8.532977 AAAATAAAATGAAGTACATGTGTGCC 57.467 30.769 9.11 0.00 39.39 5.01
331 332 3.829886 AAATGAAGTACATGTGTGCCG 57.170 42.857 9.11 0.00 39.39 5.69
332 333 2.472695 ATGAAGTACATGTGTGCCGT 57.527 45.000 9.11 0.00 37.87 5.68
333 334 3.603158 ATGAAGTACATGTGTGCCGTA 57.397 42.857 9.11 0.00 37.87 4.02
334 335 3.388345 TGAAGTACATGTGTGCCGTAA 57.612 42.857 9.11 0.00 0.00 3.18
335 336 3.061322 TGAAGTACATGTGTGCCGTAAC 58.939 45.455 9.11 0.00 0.00 2.50
336 337 3.243941 TGAAGTACATGTGTGCCGTAACT 60.244 43.478 9.11 0.00 0.00 2.24
337 338 2.683968 AGTACATGTGTGCCGTAACTG 58.316 47.619 9.11 0.00 0.00 3.16
338 339 2.036733 AGTACATGTGTGCCGTAACTGT 59.963 45.455 9.11 0.00 0.00 3.55
339 340 1.508632 ACATGTGTGCCGTAACTGTC 58.491 50.000 0.00 0.00 0.00 3.51
340 341 1.202592 ACATGTGTGCCGTAACTGTCA 60.203 47.619 0.00 0.00 0.00 3.58
341 342 1.460743 CATGTGTGCCGTAACTGTCAG 59.539 52.381 0.00 0.00 0.00 3.51
342 343 0.747852 TGTGTGCCGTAACTGTCAGA 59.252 50.000 6.91 0.00 0.00 3.27
343 344 1.269569 TGTGTGCCGTAACTGTCAGAG 60.270 52.381 6.91 0.00 0.00 3.35
344 345 1.000607 GTGTGCCGTAACTGTCAGAGA 60.001 52.381 6.91 0.00 0.00 3.10
345 346 1.684450 TGTGCCGTAACTGTCAGAGAA 59.316 47.619 6.91 0.00 0.00 2.87
346 347 2.101750 TGTGCCGTAACTGTCAGAGAAA 59.898 45.455 6.91 0.00 0.00 2.52
347 348 3.128349 GTGCCGTAACTGTCAGAGAAAA 58.872 45.455 6.91 0.00 0.00 2.29
348 349 3.558418 GTGCCGTAACTGTCAGAGAAAAA 59.442 43.478 6.91 0.00 0.00 1.94
385 386 4.927267 ACCTGTGGTTGAATGATTAGGA 57.073 40.909 0.00 0.00 27.29 2.94
386 387 4.848357 ACCTGTGGTTGAATGATTAGGAG 58.152 43.478 0.00 0.00 27.29 3.69
387 388 4.202441 CCTGTGGTTGAATGATTAGGAGG 58.798 47.826 0.00 0.00 0.00 4.30
388 389 4.202441 CTGTGGTTGAATGATTAGGAGGG 58.798 47.826 0.00 0.00 0.00 4.30
389 390 2.952310 GTGGTTGAATGATTAGGAGGGC 59.048 50.000 0.00 0.00 0.00 5.19
390 391 2.580322 TGGTTGAATGATTAGGAGGGCA 59.420 45.455 0.00 0.00 0.00 5.36
391 392 3.217626 GGTTGAATGATTAGGAGGGCAG 58.782 50.000 0.00 0.00 0.00 4.85
392 393 3.372025 GGTTGAATGATTAGGAGGGCAGT 60.372 47.826 0.00 0.00 0.00 4.40
393 394 3.565764 TGAATGATTAGGAGGGCAGTG 57.434 47.619 0.00 0.00 0.00 3.66
394 395 2.173356 TGAATGATTAGGAGGGCAGTGG 59.827 50.000 0.00 0.00 0.00 4.00
395 396 1.898863 ATGATTAGGAGGGCAGTGGT 58.101 50.000 0.00 0.00 0.00 4.16
396 397 2.561209 TGATTAGGAGGGCAGTGGTA 57.439 50.000 0.00 0.00 0.00 3.25
397 398 3.060479 TGATTAGGAGGGCAGTGGTAT 57.940 47.619 0.00 0.00 0.00 2.73
398 399 3.393687 TGATTAGGAGGGCAGTGGTATT 58.606 45.455 0.00 0.00 0.00 1.89
399 400 3.391296 TGATTAGGAGGGCAGTGGTATTC 59.609 47.826 0.00 0.00 0.00 1.75
400 401 1.802553 TAGGAGGGCAGTGGTATTCC 58.197 55.000 0.00 0.00 0.00 3.01
401 402 0.044855 AGGAGGGCAGTGGTATTCCT 59.955 55.000 0.00 0.00 34.23 3.36
402 403 1.294068 AGGAGGGCAGTGGTATTCCTA 59.706 52.381 0.00 0.00 33.47 2.94
403 404 2.124411 GGAGGGCAGTGGTATTCCTAA 58.876 52.381 0.00 0.00 34.23 2.69
404 405 2.508300 GGAGGGCAGTGGTATTCCTAAA 59.492 50.000 0.00 0.00 34.23 1.85
405 406 3.542648 GAGGGCAGTGGTATTCCTAAAC 58.457 50.000 0.00 0.00 34.23 2.01
406 407 2.241430 AGGGCAGTGGTATTCCTAAACC 59.759 50.000 0.00 0.00 36.24 3.27
407 408 2.285977 GGCAGTGGTATTCCTAAACCG 58.714 52.381 0.00 0.00 38.70 4.44
408 409 1.669265 GCAGTGGTATTCCTAAACCGC 59.331 52.381 0.00 0.00 44.87 5.68
409 410 2.285977 CAGTGGTATTCCTAAACCGCC 58.714 52.381 1.62 0.00 45.51 6.13
410 411 1.910671 AGTGGTATTCCTAAACCGCCA 59.089 47.619 1.62 0.00 45.51 5.69
411 412 2.306512 AGTGGTATTCCTAAACCGCCAA 59.693 45.455 1.62 0.00 45.51 4.52
412 413 3.083293 GTGGTATTCCTAAACCGCCAAA 58.917 45.455 0.00 0.00 39.82 3.28
413 414 3.128068 GTGGTATTCCTAAACCGCCAAAG 59.872 47.826 0.00 0.00 39.82 2.77
414 415 3.244981 TGGTATTCCTAAACCGCCAAAGT 60.245 43.478 0.00 0.00 38.70 2.66
415 416 3.760151 GGTATTCCTAAACCGCCAAAGTT 59.240 43.478 0.00 0.00 0.00 2.66
416 417 3.934457 ATTCCTAAACCGCCAAAGTTG 57.066 42.857 0.00 0.00 0.00 3.16
417 418 2.642154 TCCTAAACCGCCAAAGTTGA 57.358 45.000 0.00 0.00 0.00 3.18
418 419 2.933573 TCCTAAACCGCCAAAGTTGAA 58.066 42.857 0.00 0.00 0.00 2.69
419 420 2.882137 TCCTAAACCGCCAAAGTTGAAG 59.118 45.455 0.00 0.00 0.00 3.02
420 421 2.607038 CCTAAACCGCCAAAGTTGAAGC 60.607 50.000 0.00 0.00 0.00 3.86
421 422 0.104120 AAACCGCCAAAGTTGAAGCC 59.896 50.000 0.00 0.00 0.00 4.35
422 423 0.755327 AACCGCCAAAGTTGAAGCCT 60.755 50.000 0.00 0.00 0.00 4.58
423 424 1.172812 ACCGCCAAAGTTGAAGCCTC 61.173 55.000 0.00 0.00 0.00 4.70
424 425 1.172180 CCGCCAAAGTTGAAGCCTCA 61.172 55.000 0.00 0.00 0.00 3.86
425 426 0.667993 CGCCAAAGTTGAAGCCTCAA 59.332 50.000 0.00 0.00 39.30 3.02
426 427 1.270550 CGCCAAAGTTGAAGCCTCAAT 59.729 47.619 0.13 0.00 43.39 2.57
427 428 2.680577 GCCAAAGTTGAAGCCTCAATG 58.319 47.619 0.13 0.00 43.39 2.82
428 429 2.297033 GCCAAAGTTGAAGCCTCAATGA 59.703 45.455 0.13 0.00 43.39 2.57
429 430 3.056322 GCCAAAGTTGAAGCCTCAATGAT 60.056 43.478 0.13 0.00 43.39 2.45
430 431 4.562143 GCCAAAGTTGAAGCCTCAATGATT 60.562 41.667 0.13 0.00 43.39 2.57
431 432 5.544650 CCAAAGTTGAAGCCTCAATGATTT 58.455 37.500 0.13 1.28 43.39 2.17
432 433 5.993441 CCAAAGTTGAAGCCTCAATGATTTT 59.007 36.000 0.13 0.00 43.39 1.82
433 434 6.073440 CCAAAGTTGAAGCCTCAATGATTTTG 60.073 38.462 0.13 9.63 43.39 2.44
434 435 5.143376 AGTTGAAGCCTCAATGATTTTGG 57.857 39.130 0.13 0.00 43.39 3.28
435 436 4.590222 AGTTGAAGCCTCAATGATTTTGGT 59.410 37.500 0.13 0.00 43.39 3.67
436 437 4.524316 TGAAGCCTCAATGATTTTGGTG 57.476 40.909 0.00 0.00 0.00 4.17
437 438 3.896888 TGAAGCCTCAATGATTTTGGTGT 59.103 39.130 0.00 0.00 0.00 4.16
438 439 4.344679 TGAAGCCTCAATGATTTTGGTGTT 59.655 37.500 0.00 0.00 0.00 3.32
439 440 4.525912 AGCCTCAATGATTTTGGTGTTC 57.474 40.909 0.00 0.00 0.00 3.18
440 441 3.057315 AGCCTCAATGATTTTGGTGTTCG 60.057 43.478 0.00 0.00 0.00 3.95
441 442 3.244976 CCTCAATGATTTTGGTGTTCGC 58.755 45.455 0.00 0.00 0.00 4.70
442 443 3.305267 CCTCAATGATTTTGGTGTTCGCA 60.305 43.478 0.00 0.00 0.00 5.10
443 444 4.487948 CTCAATGATTTTGGTGTTCGCAT 58.512 39.130 0.00 0.00 0.00 4.73
444 445 4.880759 TCAATGATTTTGGTGTTCGCATT 58.119 34.783 0.00 0.00 0.00 3.56
445 446 5.295950 TCAATGATTTTGGTGTTCGCATTT 58.704 33.333 0.00 0.00 0.00 2.32
446 447 5.757320 TCAATGATTTTGGTGTTCGCATTTT 59.243 32.000 0.00 0.00 0.00 1.82
447 448 6.259608 TCAATGATTTTGGTGTTCGCATTTTT 59.740 30.769 0.00 0.00 0.00 1.94
448 449 5.649602 TGATTTTGGTGTTCGCATTTTTC 57.350 34.783 0.00 0.00 0.00 2.29
449 450 5.355596 TGATTTTGGTGTTCGCATTTTTCT 58.644 33.333 0.00 0.00 0.00 2.52
450 451 5.233902 TGATTTTGGTGTTCGCATTTTTCTG 59.766 36.000 0.00 0.00 0.00 3.02
451 452 4.377839 TTTGGTGTTCGCATTTTTCTGA 57.622 36.364 0.00 0.00 0.00 3.27
452 453 4.377839 TTGGTGTTCGCATTTTTCTGAA 57.622 36.364 0.00 0.00 0.00 3.02
453 454 4.582701 TGGTGTTCGCATTTTTCTGAAT 57.417 36.364 0.00 0.00 0.00 2.57
454 455 4.942852 TGGTGTTCGCATTTTTCTGAATT 58.057 34.783 0.00 0.00 0.00 2.17
455 456 5.355596 TGGTGTTCGCATTTTTCTGAATTT 58.644 33.333 0.00 0.00 0.00 1.82
456 457 6.507900 TGGTGTTCGCATTTTTCTGAATTTA 58.492 32.000 0.00 0.00 0.00 1.40
457 458 7.151308 TGGTGTTCGCATTTTTCTGAATTTAT 58.849 30.769 0.00 0.00 0.00 1.40
458 459 7.655328 TGGTGTTCGCATTTTTCTGAATTTATT 59.345 29.630 0.00 0.00 0.00 1.40
459 460 8.495148 GGTGTTCGCATTTTTCTGAATTTATTT 58.505 29.630 0.00 0.00 0.00 1.40
460 461 9.516091 GTGTTCGCATTTTTCTGAATTTATTTC 57.484 29.630 0.00 0.00 34.72 2.17
461 462 9.254133 TGTTCGCATTTTTCTGAATTTATTTCA 57.746 25.926 0.00 0.00 42.09 2.69
465 466 9.316859 CGCATTTTTCTGAATTTATTTCAAACC 57.683 29.630 0.00 0.00 43.64 3.27
471 472 8.810652 TTCTGAATTTATTTCAAACCTTTCGG 57.189 30.769 0.00 0.00 43.64 4.30
472 473 7.947282 TCTGAATTTATTTCAAACCTTTCGGT 58.053 30.769 0.00 0.00 43.64 4.69
473 474 9.069082 TCTGAATTTATTTCAAACCTTTCGGTA 57.931 29.630 0.00 0.00 43.64 4.02
474 475 9.685828 CTGAATTTATTTCAAACCTTTCGGTAA 57.314 29.630 0.00 0.00 43.64 2.85
477 478 9.990360 AATTTATTTCAAACCTTTCGGTAATGT 57.010 25.926 0.00 0.00 44.73 2.71
478 479 8.804688 TTTATTTCAAACCTTTCGGTAATGTG 57.195 30.769 0.00 0.00 44.73 3.21
479 480 3.907894 TCAAACCTTTCGGTAATGTGC 57.092 42.857 0.00 0.00 44.73 4.57
480 481 2.224549 TCAAACCTTTCGGTAATGTGCG 59.775 45.455 0.00 0.00 44.73 5.34
481 482 1.886886 AACCTTTCGGTAATGTGCGT 58.113 45.000 0.00 0.00 44.73 5.24
482 483 1.886886 ACCTTTCGGTAATGTGCGTT 58.113 45.000 0.00 0.00 43.29 4.84
483 484 1.802365 ACCTTTCGGTAATGTGCGTTC 59.198 47.619 0.00 0.00 43.29 3.95
484 485 1.801771 CCTTTCGGTAATGTGCGTTCA 59.198 47.619 0.00 0.00 0.00 3.18
485 486 2.159707 CCTTTCGGTAATGTGCGTTCAG 60.160 50.000 0.00 0.00 0.00 3.02
486 487 2.157834 TTCGGTAATGTGCGTTCAGT 57.842 45.000 0.00 0.00 0.00 3.41
487 488 1.424403 TCGGTAATGTGCGTTCAGTG 58.576 50.000 0.00 0.00 0.00 3.66
488 489 1.000052 TCGGTAATGTGCGTTCAGTGA 60.000 47.619 0.00 0.00 0.00 3.41
489 490 1.390123 CGGTAATGTGCGTTCAGTGAG 59.610 52.381 0.00 0.00 0.00 3.51
490 491 1.732259 GGTAATGTGCGTTCAGTGAGG 59.268 52.381 0.00 0.00 0.00 3.86
491 492 1.732259 GTAATGTGCGTTCAGTGAGGG 59.268 52.381 0.00 0.00 0.00 4.30
492 493 1.237285 AATGTGCGTTCAGTGAGGGC 61.237 55.000 9.78 9.78 0.00 5.19
499 500 1.667724 CGTTCAGTGAGGGCATCAATC 59.332 52.381 2.24 0.00 40.43 2.67
501 502 2.941720 GTTCAGTGAGGGCATCAATCTC 59.058 50.000 2.24 0.00 40.43 2.75
511 512 2.032204 GGCATCAATCTCAAGATGACGC 60.032 50.000 6.60 0.00 43.28 5.19
520 522 3.723235 AAGATGACGCGCCGCTCAT 62.723 57.895 19.10 19.10 33.23 2.90
524 526 3.188786 GACGCGCCGCTCATTCTT 61.189 61.111 5.73 0.00 0.00 2.52
526 528 2.021931 CGCGCCGCTCATTCTTTC 59.978 61.111 7.78 0.00 0.00 2.62
527 529 2.021931 GCGCCGCTCATTCTTTCG 59.978 61.111 0.00 0.00 0.00 3.46
528 530 2.452813 GCGCCGCTCATTCTTTCGA 61.453 57.895 0.00 0.00 0.00 3.71
536 538 2.485814 GCTCATTCTTTCGAAGGTGCTT 59.514 45.455 7.20 0.00 43.23 3.91
546 548 7.877003 TCTTTCGAAGGTGCTTATAGAGATAG 58.123 38.462 7.20 0.00 0.00 2.08
547 549 7.720074 TCTTTCGAAGGTGCTTATAGAGATAGA 59.280 37.037 7.20 0.00 0.00 1.98
549 551 8.410673 TTCGAAGGTGCTTATAGAGATAGAAT 57.589 34.615 0.00 0.00 0.00 2.40
558 564 2.967599 AGAGATAGAATGTGCGTGCA 57.032 45.000 0.00 0.00 0.00 4.57
562 568 4.051237 GAGATAGAATGTGCGTGCATGTA 58.949 43.478 7.93 0.00 0.00 2.29
565 571 5.528690 AGATAGAATGTGCGTGCATGTATTT 59.471 36.000 7.93 1.46 0.00 1.40
569 575 6.891624 AGAATGTGCGTGCATGTATTTATAG 58.108 36.000 7.93 0.00 0.00 1.31
570 576 6.705825 AGAATGTGCGTGCATGTATTTATAGA 59.294 34.615 7.93 0.00 0.00 1.98
571 577 5.905480 TGTGCGTGCATGTATTTATAGAG 57.095 39.130 7.93 0.00 0.00 2.43
572 578 5.356426 TGTGCGTGCATGTATTTATAGAGT 58.644 37.500 7.93 0.00 0.00 3.24
578 584 7.381408 GCGTGCATGTATTTATAGAGTTGAGTA 59.619 37.037 7.93 0.00 0.00 2.59
585 591 9.888878 TGTATTTATAGAGTTGAGTATACGTGC 57.111 33.333 0.00 0.00 0.00 5.34
586 592 9.888878 GTATTTATAGAGTTGAGTATACGTGCA 57.111 33.333 0.00 0.00 0.00 4.57
594 600 8.237949 AGAGTTGAGTATACGTGCATATGTATC 58.762 37.037 11.12 0.00 39.24 2.24
595 601 8.112016 AGTTGAGTATACGTGCATATGTATCT 57.888 34.615 11.12 9.11 39.24 1.98
604 610 3.340928 TGCATATGTATCTGCATCTGCC 58.659 45.455 13.32 1.11 43.72 4.85
632 639 4.830708 AAAAATACGTGCGTGCCG 57.169 50.000 7.55 2.02 0.00 5.69
633 640 1.943293 AAAAATACGTGCGTGCCGT 59.057 47.368 7.55 11.81 42.06 5.68
634 641 0.384974 AAAAATACGTGCGTGCCGTG 60.385 50.000 15.35 0.00 39.22 4.94
635 642 2.177654 AAAATACGTGCGTGCCGTGG 62.178 55.000 15.35 0.00 39.22 4.94
636 643 3.576932 AATACGTGCGTGCCGTGGA 62.577 57.895 15.35 1.26 39.22 4.02
655 662 4.933400 GTGGACGGTGTGTTATTGAGTAAT 59.067 41.667 0.00 0.00 0.00 1.89
720 727 2.027625 CCGCCCGTTGTCTCTTCAC 61.028 63.158 0.00 0.00 0.00 3.18
722 729 2.027625 GCCCGTTGTCTCTTCACCG 61.028 63.158 0.00 0.00 0.00 4.94
866 881 7.973944 CAGCAAATTTAACCCTACCAGTTAATC 59.026 37.037 0.00 0.00 38.94 1.75
868 883 8.474831 GCAAATTTAACCCTACCAGTTAATCAT 58.525 33.333 0.00 0.00 38.94 2.45
873 888 5.994416 ACCCTACCAGTTAATCATTCCAT 57.006 39.130 0.00 0.00 0.00 3.41
875 890 5.072741 CCCTACCAGTTAATCATTCCATGG 58.927 45.833 4.97 4.97 0.00 3.66
936 951 2.047655 CGGAAGCCGTGCCAGTAA 60.048 61.111 0.00 0.00 42.73 2.24
983 1000 4.157958 CGGGAGTCGTCGTCGTCC 62.158 72.222 1.33 2.66 38.33 4.79
986 1003 2.748843 GGAGTCGTCGTCGTCCTCC 61.749 68.421 20.03 20.03 43.05 4.30
996 1013 3.597728 CGTCCTCCTCGGCTAGCC 61.598 72.222 24.75 24.75 0.00 3.93
1017 1034 2.121832 ATGGAGGTGGACGGGACA 59.878 61.111 0.00 0.00 0.00 4.02
1408 1431 2.662700 CGAGAAGGTATATCGCACCAC 58.337 52.381 0.00 0.00 38.62 4.16
1466 1497 4.036262 TGTGATCTGTAGTTTTTGGTGCAC 59.964 41.667 8.80 8.80 0.00 4.57
1635 1679 5.835113 ACAAGGATGTAATTGTATGTGCC 57.165 39.130 0.00 0.00 37.85 5.01
1638 1682 5.372343 AGGATGTAATTGTATGTGCCTGA 57.628 39.130 0.00 0.00 0.00 3.86
1646 1690 9.202273 TGTAATTGTATGTGCCTGAAAAATTTC 57.798 29.630 0.00 0.00 37.69 2.17
1787 1835 8.647143 ATTTTGACCTGAAAATTTACACACAG 57.353 30.769 0.00 0.00 32.70 3.66
2002 2073 6.121776 TGTAGAAATAATACCGGCATCCAT 57.878 37.500 0.00 0.00 0.00 3.41
2090 2161 6.538945 TTTTCTATAAAATTGGCCAGGGAC 57.461 37.500 5.11 0.00 29.59 4.46
2262 2333 4.084745 TCGCATATTTCGTATTTCGGCTTC 60.085 41.667 0.00 0.00 40.32 3.86
2271 2342 0.324645 ATTTCGGCTTCAATGGGCCT 60.325 50.000 4.53 0.00 45.57 5.19
2310 2396 2.549064 TATGATGAATGAGTGGCCCG 57.451 50.000 0.00 0.00 0.00 6.13
2816 2902 4.838486 GTGCTCTCCGACGCCTCG 62.838 72.222 0.00 0.00 39.83 4.63
2828 2914 2.921754 CGACGCCTCGAAAAGTAAGATT 59.078 45.455 0.00 0.00 43.06 2.40
2833 2919 7.001695 ACGCCTCGAAAAGTAAGATTAATTC 57.998 36.000 0.00 0.00 0.00 2.17
2837 2923 7.010275 GCCTCGAAAAGTAAGATTAATTCGTCT 59.990 37.037 0.00 0.00 40.20 4.18
2840 2926 8.866956 TCGAAAAGTAAGATTAATTCGTCTTCC 58.133 33.333 8.14 0.00 40.20 3.46
2841 2927 7.839837 CGAAAAGTAAGATTAATTCGTCTTCCG 59.160 37.037 8.14 0.00 36.23 4.30
2850 2936 7.985752 AGATTAATTCGTCTTCCGGTTTTATCT 59.014 33.333 0.00 0.00 37.11 1.98
2851 2937 5.796350 AATTCGTCTTCCGGTTTTATCTG 57.204 39.130 0.00 0.00 37.11 2.90
2854 2948 5.080969 TCGTCTTCCGGTTTTATCTGATT 57.919 39.130 0.00 0.00 37.11 2.57
2870 2964 9.699410 TTTATCTGATTTGAATCTAACCACCAT 57.301 29.630 0.00 0.00 36.39 3.55
2881 2975 2.489938 AACCACCATGTATTGCTCGT 57.510 45.000 0.00 0.00 0.00 4.18
3066 3161 2.707849 CCTCTACCACGTCGGGGTG 61.708 68.421 29.50 18.15 39.48 4.61
3105 3200 4.509737 GCCGACGAGGTAGGCCAC 62.510 72.222 5.01 0.31 46.12 5.01
3291 3403 4.142469 GGGTGTTCTTAATTCCGATTGGTG 60.142 45.833 0.00 0.00 36.30 4.17
3314 3426 2.441901 TGGCCGCCATTCCATTCC 60.442 61.111 8.43 0.00 0.00 3.01
3343 3455 2.860735 GGCGATGACCGATATATGCTTC 59.139 50.000 0.00 0.00 41.76 3.86
3390 3504 0.767998 TGTACCTCATGTGTTGCCCA 59.232 50.000 0.00 0.00 0.00 5.36
3458 3574 6.152492 TGGCACATTTATTTATCTGCACAAGA 59.848 34.615 0.00 0.00 39.94 3.02
3495 3611 2.824041 CTGCGGTGGCGGCTAATT 60.824 61.111 11.43 0.00 44.10 1.40
3496 3612 1.522806 CTGCGGTGGCGGCTAATTA 60.523 57.895 11.43 0.00 44.10 1.40
3497 3613 0.884704 CTGCGGTGGCGGCTAATTAT 60.885 55.000 11.43 0.00 44.10 1.28
3498 3614 0.464735 TGCGGTGGCGGCTAATTATT 60.465 50.000 11.43 0.00 44.10 1.40
3499 3615 0.666374 GCGGTGGCGGCTAATTATTT 59.334 50.000 11.43 0.00 0.00 1.40
3500 3616 1.599419 GCGGTGGCGGCTAATTATTTG 60.599 52.381 11.43 0.00 0.00 2.32
3501 3617 1.673920 CGGTGGCGGCTAATTATTTGT 59.326 47.619 11.43 0.00 0.00 2.83
3502 3618 2.098443 CGGTGGCGGCTAATTATTTGTT 59.902 45.455 11.43 0.00 0.00 2.83
3503 3619 3.312973 CGGTGGCGGCTAATTATTTGTTA 59.687 43.478 11.43 0.00 0.00 2.41
3504 3620 4.553938 CGGTGGCGGCTAATTATTTGTTAG 60.554 45.833 11.43 0.00 33.36 2.34
3505 3621 4.577283 GGTGGCGGCTAATTATTTGTTAGA 59.423 41.667 11.43 0.00 32.20 2.10
3509 3625 5.679792 GGCGGCTAATTATTTGTTAGAAACG 59.320 40.000 0.00 0.00 32.20 3.60
3546 3662 5.103940 ACATACATCCTGGGTAAAGCAGATT 60.104 40.000 0.00 0.00 0.00 2.40
3578 3700 0.110486 TGACTTTGGGAGGCTGAACC 59.890 55.000 0.00 0.00 33.09 3.62
3579 3701 0.110486 GACTTTGGGAGGCTGAACCA 59.890 55.000 0.00 0.00 43.14 3.67
3771 3898 4.164843 TGCTTGTTTTTGTCTCCTAGGT 57.835 40.909 9.08 0.00 0.00 3.08
3873 4000 4.959839 ACTTCTGGTTGGTGGTGTATTTTT 59.040 37.500 0.00 0.00 0.00 1.94
4004 4138 5.423290 TCCAAGATGTGCTCAGAGAAAGATA 59.577 40.000 0.00 0.00 0.00 1.98
4028 4162 1.807165 GCAGTGCGATCGCTCTTGA 60.807 57.895 34.77 16.74 42.15 3.02
4105 4243 3.625313 TCTTTGTCTGACGTTGATTTGCA 59.375 39.130 2.98 0.00 0.00 4.08
4117 4255 6.908825 ACGTTGATTTGCAAAGAAGCTATAA 58.091 32.000 18.19 1.39 38.08 0.98
4289 4427 7.720957 CCATAATATCTTCACATGGTTCCTCAA 59.279 37.037 0.00 0.00 33.03 3.02
4520 4661 4.446371 AGCTCTTCCGGTTCTAAATGATG 58.554 43.478 0.00 0.00 0.00 3.07
4521 4662 3.561725 GCTCTTCCGGTTCTAAATGATGG 59.438 47.826 0.00 0.00 0.00 3.51
4522 4663 4.770795 CTCTTCCGGTTCTAAATGATGGT 58.229 43.478 0.00 0.00 0.00 3.55
4526 4667 7.343357 TCTTCCGGTTCTAAATGATGGTTATT 58.657 34.615 0.00 0.00 0.00 1.40
4740 4893 2.034687 ACCTGCAAGAGCGCCAAT 59.965 55.556 2.29 0.00 46.23 3.16
4884 5040 5.773575 TGACTGCTCTTTCTACACTTACTG 58.226 41.667 0.00 0.00 0.00 2.74
4942 5166 9.242477 CCGCTGTGCTCATATATATATATATGC 57.758 37.037 31.27 25.13 46.18 3.14
4943 5167 9.242477 CGCTGTGCTCATATATATATATATGCC 57.758 37.037 31.27 26.02 46.18 4.40
4958 5182 3.264574 TGCCAATGCAGTTACTCCC 57.735 52.632 0.00 0.00 44.23 4.30
4959 5183 0.698238 TGCCAATGCAGTTACTCCCT 59.302 50.000 0.00 0.00 44.23 4.20
4960 5184 1.340017 TGCCAATGCAGTTACTCCCTC 60.340 52.381 0.00 0.00 44.23 4.30
4961 5185 2.019156 GCCAATGCAGTTACTCCCTCC 61.019 57.143 0.00 0.00 37.47 4.30
4962 5186 1.656652 CAATGCAGTTACTCCCTCCG 58.343 55.000 0.00 0.00 0.00 4.63
4963 5187 1.066143 CAATGCAGTTACTCCCTCCGT 60.066 52.381 0.00 0.00 0.00 4.69
4964 5188 0.824759 ATGCAGTTACTCCCTCCGTC 59.175 55.000 0.00 0.00 0.00 4.79
4965 5189 1.255667 TGCAGTTACTCCCTCCGTCC 61.256 60.000 0.00 0.00 0.00 4.79
4966 5190 1.807886 CAGTTACTCCCTCCGTCCG 59.192 63.158 0.00 0.00 0.00 4.79
4967 5191 1.379576 AGTTACTCCCTCCGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
4968 5192 1.379044 GTTACTCCCTCCGTCCGGA 60.379 63.158 0.00 0.00 42.90 5.14
4969 5193 0.967380 GTTACTCCCTCCGTCCGGAA 60.967 60.000 5.23 0.00 44.66 4.30
4970 5194 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
4971 5195 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4972 5196 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4973 5197 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4974 5198 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4975 5199 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4976 5200 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4977 5201 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4978 5202 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4979 5203 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
4980 5204 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
4981 5205 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
4982 5206 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
4983 5207 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
4984 5208 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
4985 5209 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
4986 5210 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
4987 5211 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
4988 5212 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
4989 5213 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
4990 5214 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
4998 5222 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
4999 5223 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
5000 5224 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
5001 5225 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
5002 5226 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
5003 5227 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
5006 5230 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
5012 5236 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
5020 5244 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
5061 5285 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
5062 5286 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
5063 5287 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
5064 5288 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
5065 5289 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
5066 5290 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
5067 5291 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
5068 5292 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
5069 5293 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
5070 5294 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
5071 5295 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
5076 5300 3.521947 AGTATTTTCGGACGGAGGAAG 57.478 47.619 0.00 0.00 0.00 3.46
5311 5553 7.892609 TCTTACGCCATATAGCTCTAATTTGA 58.107 34.615 0.00 0.00 0.00 2.69
5389 5631 3.347077 CTTCAGGTGAAGCTCCTCATT 57.653 47.619 6.79 0.00 44.10 2.57
5390 5632 2.775911 TCAGGTGAAGCTCCTCATTG 57.224 50.000 0.00 0.00 32.37 2.82
5487 5733 7.566760 TTGGTCAACTGATATATCGCAAAAT 57.433 32.000 8.19 0.00 0.00 1.82
5517 5763 7.511959 AAGTATCATGCGTTGTCTATCTAGA 57.488 36.000 0.00 0.00 0.00 2.43
5558 5804 7.982354 AGAACCTTTCTCCTCATATTAAGTTCG 59.018 37.037 0.00 0.00 34.07 3.95
5561 5807 6.018669 CCTTTCTCCTCATATTAAGTTCGTGC 60.019 42.308 0.00 0.00 0.00 5.34
5593 5839 5.343860 GCACCGTATGAAACATTTTGTAACC 59.656 40.000 0.00 0.00 0.00 2.85
5598 5844 7.007905 CCGTATGAAACATTTTGTAACCATTCG 59.992 37.037 0.00 0.00 31.46 3.34
5619 5865 2.609459 GTCATATCGGCTGTTTGGTCAG 59.391 50.000 0.00 0.00 38.35 3.51
5692 5945 9.696917 GCAGTCCCCATTTTATTCTATTTTATG 57.303 33.333 0.00 0.00 0.00 1.90
5743 5996 7.552459 TGCTGTTGATTGCAAGTATACTAGTA 58.448 34.615 5.65 4.77 36.15 1.82
5744 5997 8.204160 TGCTGTTGATTGCAAGTATACTAGTAT 58.796 33.333 19.07 19.07 36.15 2.12
5745 5998 9.692749 GCTGTTGATTGCAAGTATACTAGTATA 57.307 33.333 17.03 17.03 34.01 1.47
5814 6067 4.568956 AGCATTCCTGGTTTAAACAATGC 58.431 39.130 29.05 29.05 41.27 3.56
5821 6074 5.069648 TCCTGGTTTAAACAATGCATGTCAA 59.930 36.000 19.57 0.00 42.99 3.18
5822 6075 5.933463 CCTGGTTTAAACAATGCATGTCAAT 59.067 36.000 19.57 0.00 42.99 2.57
5918 6171 4.371624 ACATGATTGACCTGTTCTCCAA 57.628 40.909 0.00 0.00 0.00 3.53
5977 6232 7.687445 GGCACCATTTTGAATTATCATTGTTC 58.313 34.615 0.00 0.00 34.96 3.18
5994 6249 8.534333 TCATTGTTCTAGTCTGTATGAAACAC 57.466 34.615 0.00 0.00 33.45 3.32
6024 6292 3.314635 GCCTTTCATCTGCATCTGTTAGG 59.685 47.826 0.00 1.20 0.00 2.69
6048 6317 1.937191 ATTAAAACTGGCCCAGTGGG 58.063 50.000 25.22 25.22 44.62 4.61
6162 6438 4.189231 GACCAGTCGCCATTAACAATAGT 58.811 43.478 0.00 0.00 0.00 2.12
6163 6439 3.938963 ACCAGTCGCCATTAACAATAGTG 59.061 43.478 0.00 0.00 0.00 2.74
6176 6452 7.921786 TTAACAATAGTGCAGCTGAGTTAAT 57.078 32.000 20.43 1.80 31.03 1.40
6192 6471 8.648557 CTGAGTTAATTACAGCTATTGCACTA 57.351 34.615 1.12 0.00 42.74 2.74
6193 6472 8.648557 TGAGTTAATTACAGCTATTGCACTAG 57.351 34.615 6.72 6.72 42.74 2.57
6194 6473 8.258007 TGAGTTAATTACAGCTATTGCACTAGT 58.742 33.333 12.19 0.00 42.74 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.609760 ATTTGGGTTTTTGTGTTTCTTTCTC 57.390 32.000 0.00 0.00 0.00 2.87
54 55 9.534565 GGCTTCTTTGTTTCTTTTTCTTTAGAT 57.465 29.630 0.00 0.00 0.00 1.98
55 56 7.979537 GGGCTTCTTTGTTTCTTTTTCTTTAGA 59.020 33.333 0.00 0.00 0.00 2.10
56 57 7.043391 CGGGCTTCTTTGTTTCTTTTTCTTTAG 60.043 37.037 0.00 0.00 0.00 1.85
57 58 6.754675 CGGGCTTCTTTGTTTCTTTTTCTTTA 59.245 34.615 0.00 0.00 0.00 1.85
58 59 5.580691 CGGGCTTCTTTGTTTCTTTTTCTTT 59.419 36.000 0.00 0.00 0.00 2.52
59 60 5.105513 TCGGGCTTCTTTGTTTCTTTTTCTT 60.106 36.000 0.00 0.00 0.00 2.52
60 61 4.401202 TCGGGCTTCTTTGTTTCTTTTTCT 59.599 37.500 0.00 0.00 0.00 2.52
61 62 4.678622 TCGGGCTTCTTTGTTTCTTTTTC 58.321 39.130 0.00 0.00 0.00 2.29
62 63 4.729227 TCGGGCTTCTTTGTTTCTTTTT 57.271 36.364 0.00 0.00 0.00 1.94
63 64 4.340950 TCATCGGGCTTCTTTGTTTCTTTT 59.659 37.500 0.00 0.00 0.00 2.27
64 65 3.888930 TCATCGGGCTTCTTTGTTTCTTT 59.111 39.130 0.00 0.00 0.00 2.52
65 66 3.486383 TCATCGGGCTTCTTTGTTTCTT 58.514 40.909 0.00 0.00 0.00 2.52
66 67 3.140325 TCATCGGGCTTCTTTGTTTCT 57.860 42.857 0.00 0.00 0.00 2.52
67 68 3.915437 TTCATCGGGCTTCTTTGTTTC 57.085 42.857 0.00 0.00 0.00 2.78
68 69 4.664150 TTTTCATCGGGCTTCTTTGTTT 57.336 36.364 0.00 0.00 0.00 2.83
69 70 4.142049 TGTTTTTCATCGGGCTTCTTTGTT 60.142 37.500 0.00 0.00 0.00 2.83
70 71 3.383185 TGTTTTTCATCGGGCTTCTTTGT 59.617 39.130 0.00 0.00 0.00 2.83
71 72 3.976169 TGTTTTTCATCGGGCTTCTTTG 58.024 40.909 0.00 0.00 0.00 2.77
72 73 4.664150 TTGTTTTTCATCGGGCTTCTTT 57.336 36.364 0.00 0.00 0.00 2.52
73 74 4.340950 TCTTTGTTTTTCATCGGGCTTCTT 59.659 37.500 0.00 0.00 0.00 2.52
74 75 3.888930 TCTTTGTTTTTCATCGGGCTTCT 59.111 39.130 0.00 0.00 0.00 2.85
75 76 4.237349 TCTTTGTTTTTCATCGGGCTTC 57.763 40.909 0.00 0.00 0.00 3.86
76 77 4.664150 TTCTTTGTTTTTCATCGGGCTT 57.336 36.364 0.00 0.00 0.00 4.35
77 78 4.664150 TTTCTTTGTTTTTCATCGGGCT 57.336 36.364 0.00 0.00 0.00 5.19
78 79 5.064071 TGTTTTTCTTTGTTTTTCATCGGGC 59.936 36.000 0.00 0.00 0.00 6.13
79 80 6.312672 ACTGTTTTTCTTTGTTTTTCATCGGG 59.687 34.615 0.00 0.00 0.00 5.14
80 81 7.062839 TCACTGTTTTTCTTTGTTTTTCATCGG 59.937 33.333 0.00 0.00 0.00 4.18
81 82 7.948137 TCACTGTTTTTCTTTGTTTTTCATCG 58.052 30.769 0.00 0.00 0.00 3.84
82 83 9.745323 CTTCACTGTTTTTCTTTGTTTTTCATC 57.255 29.630 0.00 0.00 0.00 2.92
83 84 9.487790 TCTTCACTGTTTTTCTTTGTTTTTCAT 57.512 25.926 0.00 0.00 0.00 2.57
84 85 8.879342 TCTTCACTGTTTTTCTTTGTTTTTCA 57.121 26.923 0.00 0.00 0.00 2.69
87 88 9.541143 TCTTTCTTCACTGTTTTTCTTTGTTTT 57.459 25.926 0.00 0.00 0.00 2.43
88 89 9.541143 TTCTTTCTTCACTGTTTTTCTTTGTTT 57.459 25.926 0.00 0.00 0.00 2.83
89 90 9.541143 TTTCTTTCTTCACTGTTTTTCTTTGTT 57.459 25.926 0.00 0.00 0.00 2.83
90 91 9.541143 TTTTCTTTCTTCACTGTTTTTCTTTGT 57.459 25.926 0.00 0.00 0.00 2.83
92 93 9.981114 TCTTTTCTTTCTTCACTGTTTTTCTTT 57.019 25.926 0.00 0.00 0.00 2.52
93 94 9.981114 TTCTTTTCTTTCTTCACTGTTTTTCTT 57.019 25.926 0.00 0.00 0.00 2.52
94 95 9.631452 CTTCTTTTCTTTCTTCACTGTTTTTCT 57.369 29.630 0.00 0.00 0.00 2.52
95 96 8.376203 GCTTCTTTTCTTTCTTCACTGTTTTTC 58.624 33.333 0.00 0.00 0.00 2.29
96 97 7.331934 GGCTTCTTTTCTTTCTTCACTGTTTTT 59.668 33.333 0.00 0.00 0.00 1.94
97 98 6.813649 GGCTTCTTTTCTTTCTTCACTGTTTT 59.186 34.615 0.00 0.00 0.00 2.43
98 99 6.153510 AGGCTTCTTTTCTTTCTTCACTGTTT 59.846 34.615 0.00 0.00 0.00 2.83
99 100 5.654209 AGGCTTCTTTTCTTTCTTCACTGTT 59.346 36.000 0.00 0.00 0.00 3.16
100 101 5.067023 CAGGCTTCTTTTCTTTCTTCACTGT 59.933 40.000 0.00 0.00 0.00 3.55
101 102 5.297776 TCAGGCTTCTTTTCTTTCTTCACTG 59.702 40.000 0.00 0.00 0.00 3.66
102 103 5.440610 TCAGGCTTCTTTTCTTTCTTCACT 58.559 37.500 0.00 0.00 0.00 3.41
103 104 5.757850 TCAGGCTTCTTTTCTTTCTTCAC 57.242 39.130 0.00 0.00 0.00 3.18
104 105 6.966534 AATCAGGCTTCTTTTCTTTCTTCA 57.033 33.333 0.00 0.00 0.00 3.02
105 106 9.920133 AAATAATCAGGCTTCTTTTCTTTCTTC 57.080 29.630 0.00 0.00 0.00 2.87
130 131 7.499232 TGGTTTTTGTCTGGTTTTCTTCAAAAA 59.501 29.630 0.00 0.00 40.17 1.94
131 132 6.992715 TGGTTTTTGTCTGGTTTTCTTCAAAA 59.007 30.769 0.00 0.00 34.50 2.44
132 133 6.525629 TGGTTTTTGTCTGGTTTTCTTCAAA 58.474 32.000 0.00 0.00 0.00 2.69
133 134 6.102897 TGGTTTTTGTCTGGTTTTCTTCAA 57.897 33.333 0.00 0.00 0.00 2.69
134 135 5.730296 TGGTTTTTGTCTGGTTTTCTTCA 57.270 34.783 0.00 0.00 0.00 3.02
135 136 5.929415 TGTTGGTTTTTGTCTGGTTTTCTTC 59.071 36.000 0.00 0.00 0.00 2.87
136 137 5.859495 TGTTGGTTTTTGTCTGGTTTTCTT 58.141 33.333 0.00 0.00 0.00 2.52
137 138 5.476091 TGTTGGTTTTTGTCTGGTTTTCT 57.524 34.783 0.00 0.00 0.00 2.52
138 139 6.735678 AATGTTGGTTTTTGTCTGGTTTTC 57.264 33.333 0.00 0.00 0.00 2.29
139 140 8.097662 TCTTAATGTTGGTTTTTGTCTGGTTTT 58.902 29.630 0.00 0.00 0.00 2.43
140 141 7.616313 TCTTAATGTTGGTTTTTGTCTGGTTT 58.384 30.769 0.00 0.00 0.00 3.27
141 142 7.176589 TCTTAATGTTGGTTTTTGTCTGGTT 57.823 32.000 0.00 0.00 0.00 3.67
142 143 6.783708 TCTTAATGTTGGTTTTTGTCTGGT 57.216 33.333 0.00 0.00 0.00 4.00
143 144 7.432869 TCATCTTAATGTTGGTTTTTGTCTGG 58.567 34.615 0.00 0.00 34.32 3.86
144 145 8.352201 TCTCATCTTAATGTTGGTTTTTGTCTG 58.648 33.333 0.00 0.00 34.32 3.51
145 146 8.463930 TCTCATCTTAATGTTGGTTTTTGTCT 57.536 30.769 0.00 0.00 34.32 3.41
146 147 9.528018 TTTCTCATCTTAATGTTGGTTTTTGTC 57.472 29.630 0.00 0.00 34.32 3.18
147 148 9.883142 TTTTCTCATCTTAATGTTGGTTTTTGT 57.117 25.926 0.00 0.00 34.32 2.83
149 150 9.325198 GGTTTTCTCATCTTAATGTTGGTTTTT 57.675 29.630 0.00 0.00 34.32 1.94
150 151 8.482128 TGGTTTTCTCATCTTAATGTTGGTTTT 58.518 29.630 0.00 0.00 34.32 2.43
151 152 8.017418 TGGTTTTCTCATCTTAATGTTGGTTT 57.983 30.769 0.00 0.00 34.32 3.27
152 153 7.595819 TGGTTTTCTCATCTTAATGTTGGTT 57.404 32.000 0.00 0.00 34.32 3.67
153 154 7.069331 TGTTGGTTTTCTCATCTTAATGTTGGT 59.931 33.333 0.00 0.00 34.32 3.67
154 155 7.432869 TGTTGGTTTTCTCATCTTAATGTTGG 58.567 34.615 0.00 0.00 34.32 3.77
155 156 8.755018 GTTGTTGGTTTTCTCATCTTAATGTTG 58.245 33.333 0.00 0.00 34.32 3.33
156 157 7.647715 CGTTGTTGGTTTTCTCATCTTAATGTT 59.352 33.333 0.00 0.00 34.32 2.71
157 158 7.012894 TCGTTGTTGGTTTTCTCATCTTAATGT 59.987 33.333 0.00 0.00 34.32 2.71
158 159 7.359595 TCGTTGTTGGTTTTCTCATCTTAATG 58.640 34.615 0.00 0.00 0.00 1.90
159 160 7.228706 ACTCGTTGTTGGTTTTCTCATCTTAAT 59.771 33.333 0.00 0.00 0.00 1.40
160 161 6.540914 ACTCGTTGTTGGTTTTCTCATCTTAA 59.459 34.615 0.00 0.00 0.00 1.85
161 162 6.053005 ACTCGTTGTTGGTTTTCTCATCTTA 58.947 36.000 0.00 0.00 0.00 2.10
162 163 4.881850 ACTCGTTGTTGGTTTTCTCATCTT 59.118 37.500 0.00 0.00 0.00 2.40
163 164 4.451900 ACTCGTTGTTGGTTTTCTCATCT 58.548 39.130 0.00 0.00 0.00 2.90
164 165 4.813296 ACTCGTTGTTGGTTTTCTCATC 57.187 40.909 0.00 0.00 0.00 2.92
165 166 4.638421 TGAACTCGTTGTTGGTTTTCTCAT 59.362 37.500 1.75 0.00 39.30 2.90
166 167 4.004314 TGAACTCGTTGTTGGTTTTCTCA 58.996 39.130 1.75 0.00 39.30 3.27
167 168 4.609691 TGAACTCGTTGTTGGTTTTCTC 57.390 40.909 1.75 0.00 39.30 2.87
168 169 5.576447 ATTGAACTCGTTGTTGGTTTTCT 57.424 34.783 1.75 0.00 39.30 2.52
169 170 4.436523 CGATTGAACTCGTTGTTGGTTTTC 59.563 41.667 1.75 0.00 39.30 2.29
170 171 4.095185 TCGATTGAACTCGTTGTTGGTTTT 59.905 37.500 1.75 0.00 39.30 2.43
171 172 3.623960 TCGATTGAACTCGTTGTTGGTTT 59.376 39.130 1.75 0.00 39.30 3.27
172 173 3.199677 TCGATTGAACTCGTTGTTGGTT 58.800 40.909 1.75 0.00 39.30 3.67
173 174 2.828877 TCGATTGAACTCGTTGTTGGT 58.171 42.857 1.75 0.00 39.30 3.67
174 175 3.870723 TTCGATTGAACTCGTTGTTGG 57.129 42.857 0.00 0.00 39.30 3.77
175 176 4.436523 GGTTTTCGATTGAACTCGTTGTTG 59.563 41.667 0.00 0.00 39.30 3.33
176 177 4.334481 AGGTTTTCGATTGAACTCGTTGTT 59.666 37.500 0.00 0.00 42.38 2.83
177 178 3.875134 AGGTTTTCGATTGAACTCGTTGT 59.125 39.130 0.00 0.00 39.62 3.32
178 179 4.468095 AGGTTTTCGATTGAACTCGTTG 57.532 40.909 0.00 0.00 39.62 4.10
179 180 5.535333 TCTAGGTTTTCGATTGAACTCGTT 58.465 37.500 0.00 0.00 39.62 3.85
180 181 5.048224 TCTCTAGGTTTTCGATTGAACTCGT 60.048 40.000 0.00 0.00 39.62 4.18
181 182 5.399858 TCTCTAGGTTTTCGATTGAACTCG 58.600 41.667 0.00 0.00 39.99 4.18
182 183 6.645415 TGTTCTCTAGGTTTTCGATTGAACTC 59.355 38.462 0.00 0.00 32.71 3.01
183 184 6.522054 TGTTCTCTAGGTTTTCGATTGAACT 58.478 36.000 0.00 0.00 32.71 3.01
184 185 6.780706 TGTTCTCTAGGTTTTCGATTGAAC 57.219 37.500 0.00 0.00 32.71 3.18
185 186 7.214381 TCTTGTTCTCTAGGTTTTCGATTGAA 58.786 34.615 0.00 0.00 0.00 2.69
186 187 6.755206 TCTTGTTCTCTAGGTTTTCGATTGA 58.245 36.000 0.00 0.00 0.00 2.57
187 188 7.421530 TTCTTGTTCTCTAGGTTTTCGATTG 57.578 36.000 0.00 0.00 0.00 2.67
188 189 8.446599 TTTTCTTGTTCTCTAGGTTTTCGATT 57.553 30.769 0.00 0.00 0.00 3.34
189 190 8.446599 TTTTTCTTGTTCTCTAGGTTTTCGAT 57.553 30.769 0.00 0.00 0.00 3.59
190 191 7.852971 TTTTTCTTGTTCTCTAGGTTTTCGA 57.147 32.000 0.00 0.00 0.00 3.71
211 212 3.254903 GGCGGACCATTTAGTCTGTTTTT 59.745 43.478 2.73 0.00 43.77 1.94
212 213 2.817844 GGCGGACCATTTAGTCTGTTTT 59.182 45.455 2.73 0.00 43.77 2.43
213 214 2.433436 GGCGGACCATTTAGTCTGTTT 58.567 47.619 2.73 0.00 43.77 2.83
214 215 1.339727 GGGCGGACCATTTAGTCTGTT 60.340 52.381 0.00 0.00 43.77 3.16
215 216 0.252197 GGGCGGACCATTTAGTCTGT 59.748 55.000 0.00 0.00 43.77 3.41
216 217 0.463833 GGGGCGGACCATTTAGTCTG 60.464 60.000 0.36 0.00 44.55 3.51
217 218 0.912487 TGGGGCGGACCATTTAGTCT 60.912 55.000 0.36 0.00 42.91 3.24
218 219 0.463833 CTGGGGCGGACCATTTAGTC 60.464 60.000 0.36 0.00 42.91 2.59
219 220 1.205460 ACTGGGGCGGACCATTTAGT 61.205 55.000 0.36 0.00 42.91 2.24
220 221 0.834612 TACTGGGGCGGACCATTTAG 59.165 55.000 0.36 0.00 42.91 1.85
221 222 1.142060 CATACTGGGGCGGACCATTTA 59.858 52.381 0.36 0.00 42.91 1.40
222 223 0.106719 CATACTGGGGCGGACCATTT 60.107 55.000 0.36 0.00 42.91 2.32
223 224 1.531748 CATACTGGGGCGGACCATT 59.468 57.895 0.36 0.00 42.91 3.16
224 225 3.120086 GCATACTGGGGCGGACCAT 62.120 63.158 0.36 0.00 42.91 3.55
225 226 3.792736 GCATACTGGGGCGGACCA 61.793 66.667 0.36 0.00 42.91 4.02
226 227 3.462199 GAGCATACTGGGGCGGACC 62.462 68.421 0.00 0.00 39.11 4.46
227 228 2.109181 GAGCATACTGGGGCGGAC 59.891 66.667 0.00 0.00 34.54 4.79
228 229 3.536917 CGAGCATACTGGGGCGGA 61.537 66.667 0.00 0.00 34.54 5.54
231 232 4.530857 ACGCGAGCATACTGGGGC 62.531 66.667 15.93 0.00 37.99 5.80
232 233 2.586079 CACGCGAGCATACTGGGG 60.586 66.667 15.93 0.00 39.94 4.96
233 234 2.586079 CCACGCGAGCATACTGGG 60.586 66.667 15.93 0.00 0.00 4.45
234 235 3.264897 GCCACGCGAGCATACTGG 61.265 66.667 15.93 9.56 0.00 4.00
235 236 2.509111 TGCCACGCGAGCATACTG 60.509 61.111 21.33 4.17 34.69 2.74
236 237 2.202797 CTGCCACGCGAGCATACT 60.203 61.111 24.30 0.00 40.04 2.12
237 238 1.154205 ATTCTGCCACGCGAGCATAC 61.154 55.000 24.30 4.54 40.04 2.39
238 239 0.387565 TATTCTGCCACGCGAGCATA 59.612 50.000 24.30 16.75 40.04 3.14
239 240 0.461870 TTATTCTGCCACGCGAGCAT 60.462 50.000 24.30 14.81 40.04 3.79
240 241 1.079474 TTATTCTGCCACGCGAGCA 60.079 52.632 23.07 23.07 38.82 4.26
241 242 1.348594 GTTATTCTGCCACGCGAGC 59.651 57.895 15.93 16.58 0.00 5.03
242 243 1.076533 ACGTTATTCTGCCACGCGAG 61.077 55.000 15.93 4.16 37.44 5.03
243 244 1.080366 ACGTTATTCTGCCACGCGA 60.080 52.632 15.93 0.00 37.44 5.87
244 245 1.058748 CACGTTATTCTGCCACGCG 59.941 57.895 3.53 3.53 37.44 6.01
245 246 1.323534 CTACACGTTATTCTGCCACGC 59.676 52.381 0.00 0.00 37.44 5.34
246 247 1.323534 GCTACACGTTATTCTGCCACG 59.676 52.381 0.00 0.00 39.86 4.94
247 248 1.323534 CGCTACACGTTATTCTGCCAC 59.676 52.381 0.00 0.00 36.87 5.01
248 249 1.202817 TCGCTACACGTTATTCTGCCA 59.797 47.619 0.00 0.00 44.19 4.92
249 250 1.852895 CTCGCTACACGTTATTCTGCC 59.147 52.381 0.00 0.00 44.19 4.85
250 251 2.793933 TCTCGCTACACGTTATTCTGC 58.206 47.619 0.00 0.00 44.19 4.26
251 252 3.731216 CCATCTCGCTACACGTTATTCTG 59.269 47.826 0.00 0.00 44.19 3.02
252 253 3.243434 CCCATCTCGCTACACGTTATTCT 60.243 47.826 0.00 0.00 44.19 2.40
253 254 3.050619 CCCATCTCGCTACACGTTATTC 58.949 50.000 0.00 0.00 44.19 1.75
254 255 2.429610 ACCCATCTCGCTACACGTTATT 59.570 45.455 0.00 0.00 44.19 1.40
255 256 2.029623 ACCCATCTCGCTACACGTTAT 58.970 47.619 0.00 0.00 44.19 1.89
256 257 1.133598 CACCCATCTCGCTACACGTTA 59.866 52.381 0.00 0.00 44.19 3.18
257 258 0.108804 CACCCATCTCGCTACACGTT 60.109 55.000 0.00 0.00 44.19 3.99
258 259 1.248785 ACACCCATCTCGCTACACGT 61.249 55.000 0.00 0.00 44.19 4.49
259 260 0.736636 TACACCCATCTCGCTACACG 59.263 55.000 0.00 0.00 45.62 4.49
260 261 1.749634 ACTACACCCATCTCGCTACAC 59.250 52.381 0.00 0.00 0.00 2.90
261 262 2.139323 ACTACACCCATCTCGCTACA 57.861 50.000 0.00 0.00 0.00 2.74
262 263 2.688958 AGAACTACACCCATCTCGCTAC 59.311 50.000 0.00 0.00 0.00 3.58
263 264 2.950309 GAGAACTACACCCATCTCGCTA 59.050 50.000 0.00 0.00 0.00 4.26
264 265 1.751924 GAGAACTACACCCATCTCGCT 59.248 52.381 0.00 0.00 0.00 4.93
265 266 2.211353 GAGAACTACACCCATCTCGC 57.789 55.000 0.00 0.00 0.00 5.03
267 268 1.534175 CGCGAGAACTACACCCATCTC 60.534 57.143 0.00 0.00 35.95 2.75
268 269 0.456221 CGCGAGAACTACACCCATCT 59.544 55.000 0.00 0.00 0.00 2.90
269 270 0.454600 TCGCGAGAACTACACCCATC 59.545 55.000 3.71 0.00 37.03 3.51
270 271 0.892755 TTCGCGAGAACTACACCCAT 59.107 50.000 9.59 0.00 46.92 4.00
271 272 2.343506 TTCGCGAGAACTACACCCA 58.656 52.632 9.59 0.00 46.92 4.51
281 282 3.994392 AGCAGTATTTCTTTTTCGCGAGA 59.006 39.130 9.59 0.43 39.20 4.04
282 283 4.084507 CAGCAGTATTTCTTTTTCGCGAG 58.915 43.478 9.59 0.00 0.00 5.03
283 284 3.743911 TCAGCAGTATTTCTTTTTCGCGA 59.256 39.130 3.71 3.71 0.00 5.87
284 285 4.065423 TCAGCAGTATTTCTTTTTCGCG 57.935 40.909 0.00 0.00 0.00 5.87
285 286 6.747659 TTTTCAGCAGTATTTCTTTTTCGC 57.252 33.333 0.00 0.00 0.00 4.70
298 299 9.630098 CATGTACTTCATTTTATTTTCAGCAGT 57.370 29.630 0.00 0.00 34.09 4.40
299 300 9.630098 ACATGTACTTCATTTTATTTTCAGCAG 57.370 29.630 0.00 0.00 34.09 4.24
300 301 9.409312 CACATGTACTTCATTTTATTTTCAGCA 57.591 29.630 0.00 0.00 34.09 4.41
301 302 9.410556 ACACATGTACTTCATTTTATTTTCAGC 57.589 29.630 0.00 0.00 34.09 4.26
303 304 9.190858 GCACACATGTACTTCATTTTATTTTCA 57.809 29.630 0.00 0.00 34.09 2.69
304 305 8.647226 GGCACACATGTACTTCATTTTATTTTC 58.353 33.333 0.00 0.00 34.09 2.29
305 306 7.328249 CGGCACACATGTACTTCATTTTATTTT 59.672 33.333 0.00 0.00 34.09 1.82
306 307 6.806249 CGGCACACATGTACTTCATTTTATTT 59.194 34.615 0.00 0.00 34.09 1.40
307 308 6.072175 ACGGCACACATGTACTTCATTTTATT 60.072 34.615 0.00 0.00 34.09 1.40
308 309 5.414454 ACGGCACACATGTACTTCATTTTAT 59.586 36.000 0.00 0.00 34.09 1.40
309 310 4.757657 ACGGCACACATGTACTTCATTTTA 59.242 37.500 0.00 0.00 34.09 1.52
310 311 3.568007 ACGGCACACATGTACTTCATTTT 59.432 39.130 0.00 0.00 34.09 1.82
311 312 3.146066 ACGGCACACATGTACTTCATTT 58.854 40.909 0.00 0.00 34.09 2.32
312 313 2.778299 ACGGCACACATGTACTTCATT 58.222 42.857 0.00 0.00 34.09 2.57
313 314 2.472695 ACGGCACACATGTACTTCAT 57.527 45.000 0.00 0.00 37.22 2.57
314 315 3.061322 GTTACGGCACACATGTACTTCA 58.939 45.455 0.00 0.00 0.00 3.02
315 316 3.122948 CAGTTACGGCACACATGTACTTC 59.877 47.826 0.00 0.00 0.00 3.01
316 317 3.064207 CAGTTACGGCACACATGTACTT 58.936 45.455 0.00 0.00 0.00 2.24
317 318 2.036733 ACAGTTACGGCACACATGTACT 59.963 45.455 0.00 0.00 0.00 2.73
318 319 2.409975 ACAGTTACGGCACACATGTAC 58.590 47.619 0.00 0.00 0.00 2.90
319 320 2.036089 TGACAGTTACGGCACACATGTA 59.964 45.455 0.00 0.00 0.00 2.29
320 321 1.202592 TGACAGTTACGGCACACATGT 60.203 47.619 0.00 0.00 0.00 3.21
321 322 1.460743 CTGACAGTTACGGCACACATG 59.539 52.381 0.00 0.00 0.00 3.21
322 323 1.343142 TCTGACAGTTACGGCACACAT 59.657 47.619 1.59 0.00 0.00 3.21
323 324 0.747852 TCTGACAGTTACGGCACACA 59.252 50.000 1.59 0.00 0.00 3.72
324 325 1.000607 TCTCTGACAGTTACGGCACAC 60.001 52.381 1.59 0.00 0.00 3.82
325 326 1.324383 TCTCTGACAGTTACGGCACA 58.676 50.000 1.59 0.00 0.00 4.57
326 327 2.433868 TTCTCTGACAGTTACGGCAC 57.566 50.000 1.59 0.00 0.00 5.01
327 328 3.462483 TTTTCTCTGACAGTTACGGCA 57.538 42.857 1.59 0.00 0.00 5.69
364 365 4.324563 CCTCCTAATCATTCAACCACAGGT 60.325 45.833 0.00 0.00 37.65 4.00
365 366 4.202441 CCTCCTAATCATTCAACCACAGG 58.798 47.826 0.00 0.00 0.00 4.00
366 367 4.202441 CCCTCCTAATCATTCAACCACAG 58.798 47.826 0.00 0.00 0.00 3.66
367 368 3.624707 GCCCTCCTAATCATTCAACCACA 60.625 47.826 0.00 0.00 0.00 4.17
368 369 2.952310 GCCCTCCTAATCATTCAACCAC 59.048 50.000 0.00 0.00 0.00 4.16
369 370 2.580322 TGCCCTCCTAATCATTCAACCA 59.420 45.455 0.00 0.00 0.00 3.67
370 371 3.217626 CTGCCCTCCTAATCATTCAACC 58.782 50.000 0.00 0.00 0.00 3.77
371 372 3.629398 CACTGCCCTCCTAATCATTCAAC 59.371 47.826 0.00 0.00 0.00 3.18
372 373 3.371917 CCACTGCCCTCCTAATCATTCAA 60.372 47.826 0.00 0.00 0.00 2.69
373 374 2.173356 CCACTGCCCTCCTAATCATTCA 59.827 50.000 0.00 0.00 0.00 2.57
374 375 2.173569 ACCACTGCCCTCCTAATCATTC 59.826 50.000 0.00 0.00 0.00 2.67
375 376 2.208872 ACCACTGCCCTCCTAATCATT 58.791 47.619 0.00 0.00 0.00 2.57
376 377 1.898863 ACCACTGCCCTCCTAATCAT 58.101 50.000 0.00 0.00 0.00 2.45
377 378 2.561209 TACCACTGCCCTCCTAATCA 57.439 50.000 0.00 0.00 0.00 2.57
378 379 3.244596 GGAATACCACTGCCCTCCTAATC 60.245 52.174 0.00 0.00 35.97 1.75
379 380 2.711547 GGAATACCACTGCCCTCCTAAT 59.288 50.000 0.00 0.00 35.97 1.73
380 381 2.124411 GGAATACCACTGCCCTCCTAA 58.876 52.381 0.00 0.00 35.97 2.69
381 382 1.294068 AGGAATACCACTGCCCTCCTA 59.706 52.381 0.00 0.00 38.94 2.94
382 383 0.044855 AGGAATACCACTGCCCTCCT 59.955 55.000 0.00 0.00 38.94 3.69
383 384 1.802553 TAGGAATACCACTGCCCTCC 58.197 55.000 0.00 0.00 38.94 4.30
384 385 3.542648 GTTTAGGAATACCACTGCCCTC 58.457 50.000 0.00 0.00 38.94 4.30
385 386 2.241430 GGTTTAGGAATACCACTGCCCT 59.759 50.000 0.00 0.00 38.94 5.19
386 387 2.651455 GGTTTAGGAATACCACTGCCC 58.349 52.381 0.00 0.00 38.94 5.36
387 388 2.285977 CGGTTTAGGAATACCACTGCC 58.714 52.381 0.00 0.00 38.94 4.85
388 389 1.669265 GCGGTTTAGGAATACCACTGC 59.331 52.381 0.00 0.00 35.75 4.40
389 390 2.285977 GGCGGTTTAGGAATACCACTG 58.714 52.381 0.00 0.00 38.94 3.66
390 391 1.910671 TGGCGGTTTAGGAATACCACT 59.089 47.619 0.00 0.00 38.94 4.00
391 392 2.406596 TGGCGGTTTAGGAATACCAC 57.593 50.000 0.00 0.00 38.94 4.16
392 393 3.244981 ACTTTGGCGGTTTAGGAATACCA 60.245 43.478 0.00 0.00 38.94 3.25
393 394 3.349927 ACTTTGGCGGTTTAGGAATACC 58.650 45.455 0.00 0.00 0.00 2.73
394 395 4.456566 TCAACTTTGGCGGTTTAGGAATAC 59.543 41.667 0.00 0.00 0.00 1.89
395 396 4.653868 TCAACTTTGGCGGTTTAGGAATA 58.346 39.130 0.00 0.00 0.00 1.75
396 397 3.492337 TCAACTTTGGCGGTTTAGGAAT 58.508 40.909 0.00 0.00 0.00 3.01
397 398 2.933573 TCAACTTTGGCGGTTTAGGAA 58.066 42.857 0.00 0.00 0.00 3.36
398 399 2.642154 TCAACTTTGGCGGTTTAGGA 57.358 45.000 0.00 0.00 0.00 2.94
399 400 2.607038 GCTTCAACTTTGGCGGTTTAGG 60.607 50.000 0.00 0.00 0.00 2.69
400 401 2.607038 GGCTTCAACTTTGGCGGTTTAG 60.607 50.000 0.00 0.00 0.00 1.85
401 402 1.338655 GGCTTCAACTTTGGCGGTTTA 59.661 47.619 0.00 0.00 0.00 2.01
402 403 0.104120 GGCTTCAACTTTGGCGGTTT 59.896 50.000 0.00 0.00 0.00 3.27
403 404 0.755327 AGGCTTCAACTTTGGCGGTT 60.755 50.000 0.00 0.00 0.00 4.44
404 405 1.152756 AGGCTTCAACTTTGGCGGT 60.153 52.632 0.00 0.00 0.00 5.68
405 406 1.172180 TGAGGCTTCAACTTTGGCGG 61.172 55.000 0.00 0.00 0.00 6.13
406 407 0.667993 TTGAGGCTTCAACTTTGGCG 59.332 50.000 7.24 0.00 38.37 5.69
407 408 2.297033 TCATTGAGGCTTCAACTTTGGC 59.703 45.455 14.09 0.00 45.54 4.52
408 409 4.796038 ATCATTGAGGCTTCAACTTTGG 57.204 40.909 14.09 2.02 45.54 3.28
409 410 6.073440 CCAAAATCATTGAGGCTTCAACTTTG 60.073 38.462 14.09 17.72 45.54 2.77
410 411 5.993441 CCAAAATCATTGAGGCTTCAACTTT 59.007 36.000 14.09 10.80 45.54 2.66
411 412 5.070847 ACCAAAATCATTGAGGCTTCAACTT 59.929 36.000 14.09 5.34 45.54 2.66
412 413 4.590222 ACCAAAATCATTGAGGCTTCAACT 59.410 37.500 14.09 0.76 45.54 3.16
413 414 4.687483 CACCAAAATCATTGAGGCTTCAAC 59.313 41.667 14.09 0.00 45.54 3.18
414 415 4.344679 ACACCAAAATCATTGAGGCTTCAA 59.655 37.500 14.17 14.17 46.67 2.69
415 416 3.896888 ACACCAAAATCATTGAGGCTTCA 59.103 39.130 0.00 0.00 0.00 3.02
416 417 4.525912 ACACCAAAATCATTGAGGCTTC 57.474 40.909 0.00 0.00 0.00 3.86
417 418 4.559300 CGAACACCAAAATCATTGAGGCTT 60.559 41.667 0.00 0.00 0.00 4.35
418 419 3.057315 CGAACACCAAAATCATTGAGGCT 60.057 43.478 0.00 0.00 0.00 4.58
419 420 3.244976 CGAACACCAAAATCATTGAGGC 58.755 45.455 0.00 0.00 0.00 4.70
420 421 3.244976 GCGAACACCAAAATCATTGAGG 58.755 45.455 0.00 0.00 0.00 3.86
421 422 3.899734 TGCGAACACCAAAATCATTGAG 58.100 40.909 0.00 0.00 0.00 3.02
422 423 3.998099 TGCGAACACCAAAATCATTGA 57.002 38.095 0.00 0.00 0.00 2.57
423 424 5.594724 AAATGCGAACACCAAAATCATTG 57.405 34.783 0.00 0.00 0.00 2.82
424 425 6.482973 AGAAAAATGCGAACACCAAAATCATT 59.517 30.769 0.00 0.00 0.00 2.57
425 426 5.990996 AGAAAAATGCGAACACCAAAATCAT 59.009 32.000 0.00 0.00 0.00 2.45
426 427 5.233902 CAGAAAAATGCGAACACCAAAATCA 59.766 36.000 0.00 0.00 0.00 2.57
427 428 5.461737 TCAGAAAAATGCGAACACCAAAATC 59.538 36.000 0.00 0.00 0.00 2.17
428 429 5.355596 TCAGAAAAATGCGAACACCAAAAT 58.644 33.333 0.00 0.00 0.00 1.82
429 430 4.748892 TCAGAAAAATGCGAACACCAAAA 58.251 34.783 0.00 0.00 0.00 2.44
430 431 4.377839 TCAGAAAAATGCGAACACCAAA 57.622 36.364 0.00 0.00 0.00 3.28
431 432 4.377839 TTCAGAAAAATGCGAACACCAA 57.622 36.364 0.00 0.00 0.00 3.67
432 433 4.582701 ATTCAGAAAAATGCGAACACCA 57.417 36.364 0.00 0.00 0.00 4.17
433 434 5.905480 AAATTCAGAAAAATGCGAACACC 57.095 34.783 0.00 0.00 0.00 4.16
434 435 9.516091 GAAATAAATTCAGAAAAATGCGAACAC 57.484 29.630 0.00 0.00 37.99 3.32
435 436 9.254133 TGAAATAAATTCAGAAAAATGCGAACA 57.746 25.926 0.00 0.00 43.08 3.18
465 466 2.478894 ACTGAACGCACATTACCGAAAG 59.521 45.455 0.00 0.00 0.00 2.62
466 467 2.222213 CACTGAACGCACATTACCGAAA 59.778 45.455 0.00 0.00 0.00 3.46
467 468 1.795872 CACTGAACGCACATTACCGAA 59.204 47.619 0.00 0.00 0.00 4.30
468 469 1.000052 TCACTGAACGCACATTACCGA 60.000 47.619 0.00 0.00 0.00 4.69
469 470 1.390123 CTCACTGAACGCACATTACCG 59.610 52.381 0.00 0.00 0.00 4.02
470 471 1.732259 CCTCACTGAACGCACATTACC 59.268 52.381 0.00 0.00 0.00 2.85
471 472 1.732259 CCCTCACTGAACGCACATTAC 59.268 52.381 0.00 0.00 0.00 1.89
472 473 1.943968 GCCCTCACTGAACGCACATTA 60.944 52.381 0.00 0.00 0.00 1.90
473 474 1.237285 GCCCTCACTGAACGCACATT 61.237 55.000 0.00 0.00 0.00 2.71
474 475 1.672356 GCCCTCACTGAACGCACAT 60.672 57.895 0.00 0.00 0.00 3.21
475 476 2.280797 GCCCTCACTGAACGCACA 60.281 61.111 0.00 0.00 0.00 4.57
476 477 1.639298 GATGCCCTCACTGAACGCAC 61.639 60.000 2.55 0.00 31.17 5.34
477 478 1.375908 GATGCCCTCACTGAACGCA 60.376 57.895 2.92 2.92 0.00 5.24
478 479 0.955428 TTGATGCCCTCACTGAACGC 60.955 55.000 0.00 0.00 32.17 4.84
479 480 1.667724 GATTGATGCCCTCACTGAACG 59.332 52.381 0.00 0.00 32.17 3.95
480 481 2.941720 GAGATTGATGCCCTCACTGAAC 59.058 50.000 0.00 0.00 32.17 3.18
481 482 2.573009 TGAGATTGATGCCCTCACTGAA 59.427 45.455 0.00 0.00 32.57 3.02
482 483 2.190538 TGAGATTGATGCCCTCACTGA 58.809 47.619 0.00 0.00 32.57 3.41
483 484 2.704464 TGAGATTGATGCCCTCACTG 57.296 50.000 0.00 0.00 32.57 3.66
484 485 2.842496 TCTTGAGATTGATGCCCTCACT 59.158 45.455 0.00 0.00 36.75 3.41
485 486 3.272574 TCTTGAGATTGATGCCCTCAC 57.727 47.619 0.00 0.00 36.75 3.51
486 487 3.457012 TCATCTTGAGATTGATGCCCTCA 59.543 43.478 0.00 0.00 39.69 3.86
487 488 3.814283 GTCATCTTGAGATTGATGCCCTC 59.186 47.826 0.00 0.00 39.69 4.30
488 489 3.743584 CGTCATCTTGAGATTGATGCCCT 60.744 47.826 0.00 0.00 39.69 5.19
489 490 2.547211 CGTCATCTTGAGATTGATGCCC 59.453 50.000 0.00 0.00 39.69 5.36
490 491 2.032204 GCGTCATCTTGAGATTGATGCC 60.032 50.000 17.47 7.82 39.69 4.40
491 492 2.348311 CGCGTCATCTTGAGATTGATGC 60.348 50.000 17.89 17.89 39.69 3.91
492 493 2.348311 GCGCGTCATCTTGAGATTGATG 60.348 50.000 8.43 0.00 40.82 3.07
499 500 3.918220 GCGGCGCGTCATCTTGAG 61.918 66.667 19.09 0.00 0.00 3.02
501 502 3.918220 GAGCGGCGCGTCATCTTG 61.918 66.667 27.59 0.00 0.00 3.02
509 510 2.021931 GAAAGAATGAGCGGCGCG 59.978 61.111 27.59 0.00 0.00 6.86
511 512 2.078226 TTCGAAAGAATGAGCGGCG 58.922 52.632 0.51 0.51 46.92 6.46
524 526 7.818997 TTCTATCTCTATAAGCACCTTCGAA 57.181 36.000 0.00 0.00 0.00 3.71
526 528 7.540400 CACATTCTATCTCTATAAGCACCTTCG 59.460 40.741 0.00 0.00 0.00 3.79
527 529 7.330700 GCACATTCTATCTCTATAAGCACCTTC 59.669 40.741 0.00 0.00 0.00 3.46
528 530 7.158021 GCACATTCTATCTCTATAAGCACCTT 58.842 38.462 0.00 0.00 0.00 3.50
536 538 5.705609 TGCACGCACATTCTATCTCTATA 57.294 39.130 0.00 0.00 0.00 1.31
546 548 6.887368 TCTATAAATACATGCACGCACATTC 58.113 36.000 0.00 0.00 0.00 2.67
547 549 6.483307 ACTCTATAAATACATGCACGCACATT 59.517 34.615 0.00 0.00 0.00 2.71
549 551 5.356426 ACTCTATAAATACATGCACGCACA 58.644 37.500 0.00 0.00 0.00 4.57
565 571 9.227777 ACATATGCACGTATACTCAACTCTATA 57.772 33.333 1.58 0.00 0.00 1.31
569 575 8.237949 AGATACATATGCACGTATACTCAACTC 58.762 37.037 1.58 0.00 0.00 3.01
570 576 8.023706 CAGATACATATGCACGTATACTCAACT 58.976 37.037 1.58 0.00 0.00 3.16
571 577 7.201359 GCAGATACATATGCACGTATACTCAAC 60.201 40.741 1.58 0.00 43.98 3.18
572 578 6.806739 GCAGATACATATGCACGTATACTCAA 59.193 38.462 1.58 0.00 43.98 3.02
585 591 3.939592 CAGGGCAGATGCAGATACATATG 59.060 47.826 7.19 0.00 44.36 1.78
586 592 3.586174 ACAGGGCAGATGCAGATACATAT 59.414 43.478 7.19 0.00 44.36 1.78
594 600 1.825090 TTAACACAGGGCAGATGCAG 58.175 50.000 7.19 0.00 44.36 4.41
595 601 2.284754 TTTAACACAGGGCAGATGCA 57.715 45.000 7.19 0.00 44.36 3.96
631 638 1.724623 CTCAATAACACACCGTCCACG 59.275 52.381 0.00 0.00 39.44 4.94
632 639 2.762745 ACTCAATAACACACCGTCCAC 58.237 47.619 0.00 0.00 0.00 4.02
633 640 4.603989 TTACTCAATAACACACCGTCCA 57.396 40.909 0.00 0.00 0.00 4.02
634 641 5.291128 CAGATTACTCAATAACACACCGTCC 59.709 44.000 0.00 0.00 0.00 4.79
635 642 5.867716 ACAGATTACTCAATAACACACCGTC 59.132 40.000 0.00 0.00 0.00 4.79
636 643 5.790593 ACAGATTACTCAATAACACACCGT 58.209 37.500 0.00 0.00 0.00 4.83
637 644 5.867174 TGACAGATTACTCAATAACACACCG 59.133 40.000 0.00 0.00 0.00 4.94
638 645 6.183360 CGTGACAGATTACTCAATAACACACC 60.183 42.308 0.00 0.00 0.00 4.16
639 646 6.365247 ACGTGACAGATTACTCAATAACACAC 59.635 38.462 0.00 0.00 0.00 3.82
640 647 6.452242 ACGTGACAGATTACTCAATAACACA 58.548 36.000 0.00 0.00 0.00 3.72
641 648 6.946229 ACGTGACAGATTACTCAATAACAC 57.054 37.500 0.00 0.00 0.00 3.32
642 649 7.570507 GCAAACGTGACAGATTACTCAATAACA 60.571 37.037 0.00 0.00 0.00 2.41
655 662 2.351455 TGTCTTTGCAAACGTGACAGA 58.649 42.857 22.02 9.13 33.45 3.41
701 708 3.119096 GAAGAGACAACGGGCGGC 61.119 66.667 0.00 0.00 0.00 6.53
720 727 0.677731 TTTTGGCAGATGGAGCTCGG 60.678 55.000 7.83 0.00 0.00 4.63
818 833 1.201343 GAGAGCGCGTCAAGTAATCC 58.799 55.000 8.43 0.00 0.00 3.01
866 881 3.368248 AGGGTTTGATGACCATGGAATG 58.632 45.455 21.47 0.00 46.21 2.67
868 883 3.849574 TCTAGGGTTTGATGACCATGGAA 59.150 43.478 21.47 6.54 37.90 3.53
873 888 4.394729 GTGTTTCTAGGGTTTGATGACCA 58.605 43.478 0.00 0.00 41.65 4.02
875 890 4.394729 TGGTGTTTCTAGGGTTTGATGAC 58.605 43.478 0.00 0.00 0.00 3.06
996 1013 4.838152 CCGTCCACCTCCATGGCG 62.838 72.222 6.96 0.00 39.85 5.69
1017 1034 1.189524 TGAAATCCGTCAGGTCCGGT 61.190 55.000 0.00 0.00 45.63 5.28
1254 1277 1.069358 GACCCGACCATCATCCTCTTC 59.931 57.143 0.00 0.00 0.00 2.87
1288 1311 3.733507 TAGACGGCGAGCCCATCCT 62.734 63.158 16.62 3.40 0.00 3.24
1403 1426 0.389296 TATGCACGAACGGAGTGGTG 60.389 55.000 8.76 2.43 45.00 4.17
1405 1428 0.930310 CATATGCACGAACGGAGTGG 59.070 55.000 8.76 0.00 45.00 4.00
1408 1431 1.559814 CGCATATGCACGAACGGAG 59.440 57.895 26.52 3.88 42.21 4.63
1435 1466 5.824904 AAACTACAGATCACAATGCATCC 57.175 39.130 0.00 0.00 0.00 3.51
1466 1497 1.716050 CTGTGAGACGACACGATGTTG 59.284 52.381 0.00 0.00 42.86 3.33
1516 1557 2.871637 GCTTGGTTTCCAAAATGCCCTC 60.872 50.000 2.85 0.00 43.44 4.30
1604 1648 7.408756 ACAATTACATCCTTGTATGCATGTT 57.591 32.000 10.16 0.00 38.12 2.71
1646 1690 6.962686 TCGCAATTCAAGATATTTCATCCTG 58.037 36.000 0.00 0.00 0.00 3.86
1684 1731 4.842531 TTGCTCATCCTCAAAGTCCATA 57.157 40.909 0.00 0.00 0.00 2.74
1744 1792 7.410728 GGTCAAAATATGTTGAAATGCGAGTTG 60.411 37.037 9.98 0.00 39.18 3.16
1746 1794 6.071952 AGGTCAAAATATGTTGAAATGCGAGT 60.072 34.615 9.98 0.00 39.18 4.18
1816 1883 8.865978 ACTTCCAAATTCAAACGTTTTAGTTTC 58.134 29.630 11.66 0.00 41.84 2.78
1987 2058 6.174760 GTTGGTATAATGGATGCCGGTATTA 58.825 40.000 6.46 0.00 43.08 0.98
1994 2065 5.594317 AGACTTTGTTGGTATAATGGATGCC 59.406 40.000 0.00 0.00 40.64 4.40
2206 2277 3.726190 GCAAAAAGTGAGCTGACGATAGC 60.726 47.826 0.00 7.43 44.01 2.97
2212 2283 2.849880 TGTGCAAAAAGTGAGCTGAC 57.150 45.000 0.00 0.00 0.00 3.51
2271 2342 6.999950 TCATAATATGCTTTCGGCCTAGTTA 58.000 36.000 0.00 0.00 40.92 2.24
2833 2919 5.350365 TCAAATCAGATAAAACCGGAAGACG 59.650 40.000 9.46 0.00 43.80 4.18
2837 2923 7.938140 AGATTCAAATCAGATAAAACCGGAA 57.062 32.000 9.46 0.00 37.89 4.30
2840 2926 8.673711 TGGTTAGATTCAAATCAGATAAAACCG 58.326 33.333 5.59 0.00 37.89 4.44
2841 2927 9.788960 GTGGTTAGATTCAAATCAGATAAAACC 57.211 33.333 5.59 8.47 37.89 3.27
2850 2936 8.685427 CAATACATGGTGGTTAGATTCAAATCA 58.315 33.333 0.00 0.00 37.89 2.57
2851 2937 7.649306 GCAATACATGGTGGTTAGATTCAAATC 59.351 37.037 0.00 0.00 35.64 2.17
2854 2948 6.186957 AGCAATACATGGTGGTTAGATTCAA 58.813 36.000 0.00 0.00 38.62 2.69
2870 2964 1.459209 CGCAAGTGAACGAGCAATACA 59.541 47.619 0.00 0.00 0.00 2.29
3314 3426 0.460109 TCGGTCATCGCCATTCACTG 60.460 55.000 0.00 0.00 39.05 3.66
3343 3455 1.003262 CCCAAACTCGCAATTGCACG 61.003 55.000 28.77 20.29 42.21 5.34
3390 3504 7.377398 TCATTTGTTGCTGTGCATATTAACTT 58.623 30.769 9.99 0.00 38.76 2.66
3447 3563 1.827344 TCCTCGACATCTTGTGCAGAT 59.173 47.619 0.00 0.00 43.80 2.90
3458 3574 1.788258 CGCATTGCTATCCTCGACAT 58.212 50.000 7.12 0.00 0.00 3.06
3479 3595 0.464735 AATAATTAGCCGCCACCGCA 60.465 50.000 0.00 0.00 34.03 5.69
3488 3604 6.792326 AGCCGTTTCTAACAAATAATTAGCC 58.208 36.000 0.00 0.00 30.95 3.93
3489 3605 7.753580 ACAAGCCGTTTCTAACAAATAATTAGC 59.246 33.333 0.00 0.00 30.95 3.09
3490 3606 9.620660 AACAAGCCGTTTCTAACAAATAATTAG 57.379 29.630 0.00 0.00 32.35 1.73
3491 3607 9.615295 GAACAAGCCGTTTCTAACAAATAATTA 57.385 29.630 0.00 0.00 38.19 1.40
3492 3608 7.597369 GGAACAAGCCGTTTCTAACAAATAATT 59.403 33.333 0.00 0.00 38.19 1.40
3494 3610 6.263617 AGGAACAAGCCGTTTCTAACAAATAA 59.736 34.615 0.00 0.00 42.06 1.40
3495 3611 5.766174 AGGAACAAGCCGTTTCTAACAAATA 59.234 36.000 0.00 0.00 42.06 1.40
3496 3612 4.583073 AGGAACAAGCCGTTTCTAACAAAT 59.417 37.500 0.00 0.00 42.06 2.32
3497 3613 3.949113 AGGAACAAGCCGTTTCTAACAAA 59.051 39.130 0.00 0.00 42.06 2.83
3498 3614 3.314080 CAGGAACAAGCCGTTTCTAACAA 59.686 43.478 0.00 0.00 41.95 2.83
3499 3615 2.875933 CAGGAACAAGCCGTTTCTAACA 59.124 45.455 0.00 0.00 41.95 2.41
3500 3616 2.350484 GCAGGAACAAGCCGTTTCTAAC 60.350 50.000 0.00 0.00 41.95 2.34
3501 3617 1.877443 GCAGGAACAAGCCGTTTCTAA 59.123 47.619 0.00 0.00 41.95 2.10
3502 3618 1.202710 TGCAGGAACAAGCCGTTTCTA 60.203 47.619 0.00 0.00 41.95 2.10
3503 3619 0.465460 TGCAGGAACAAGCCGTTTCT 60.465 50.000 0.00 0.00 44.99 2.52
3504 3620 0.317854 GTGCAGGAACAAGCCGTTTC 60.318 55.000 0.00 0.00 38.19 2.78
3505 3621 1.034838 TGTGCAGGAACAAGCCGTTT 61.035 50.000 0.00 0.00 38.19 3.60
3509 3625 1.533625 TGTATGTGCAGGAACAAGCC 58.466 50.000 0.00 0.00 32.81 4.35
3546 3662 3.758023 CCCAAAGTCAGCATCATACACAA 59.242 43.478 0.00 0.00 0.00 3.33
3578 3700 9.759473 AATCCCTCCATATCAACCTATAATTTG 57.241 33.333 0.00 0.00 0.00 2.32
3771 3898 0.819259 GAGTGTGCAAACTGAGCCCA 60.819 55.000 16.08 0.00 0.00 5.36
4004 4138 2.182791 CGATCGCACTGCCTCTGT 59.817 61.111 0.26 0.00 0.00 3.41
4028 4162 3.243434 CGTTTATGCTCAGAGGTACCGAT 60.243 47.826 6.18 0.00 0.00 4.18
4105 4243 9.816354 TTTGCAACTTTTCTTTATAGCTTCTTT 57.184 25.926 0.00 0.00 0.00 2.52
4117 4255 8.947055 ACTAACATGATTTTGCAACTTTTCTT 57.053 26.923 0.00 0.00 0.00 2.52
4520 4661 9.435688 AGGAAAAATGCATGAGTAAAAATAACC 57.564 29.630 0.00 0.00 0.00 2.85
4526 4667 8.991026 CATTTCAGGAAAAATGCATGAGTAAAA 58.009 29.630 0.00 0.00 39.14 1.52
4740 4893 8.314751 TCAAAATCAAGGTAAAACCAGACAAAA 58.685 29.630 0.00 0.00 41.95 2.44
4892 5048 1.024271 TGATGCTTCGCCAATTAGCC 58.976 50.000 0.00 0.00 34.03 3.93
4942 5166 1.743772 CGGAGGGAGTAACTGCATTGG 60.744 57.143 0.00 0.00 0.00 3.16
4943 5167 1.066143 ACGGAGGGAGTAACTGCATTG 60.066 52.381 0.00 0.00 0.00 2.82
4944 5168 1.207329 GACGGAGGGAGTAACTGCATT 59.793 52.381 0.00 0.00 0.00 3.56
4945 5169 0.824759 GACGGAGGGAGTAACTGCAT 59.175 55.000 0.00 0.00 0.00 3.96
4946 5170 1.255667 GGACGGAGGGAGTAACTGCA 61.256 60.000 0.00 0.00 0.00 4.41
4947 5171 1.516423 GGACGGAGGGAGTAACTGC 59.484 63.158 0.00 0.00 0.00 4.40
4948 5172 1.664321 CCGGACGGAGGGAGTAACTG 61.664 65.000 4.40 0.00 37.50 3.16
4949 5173 1.379576 CCGGACGGAGGGAGTAACT 60.380 63.158 4.40 0.00 37.50 2.24
4950 5174 0.967380 TTCCGGACGGAGGGAGTAAC 60.967 60.000 13.64 0.00 46.06 2.50
4951 5175 0.251742 TTTCCGGACGGAGGGAGTAA 60.252 55.000 13.64 1.47 46.06 2.24
4952 5176 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4953 5177 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
4954 5178 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4955 5179 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4956 5180 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4957 5181 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4958 5182 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
4959 5183 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
4960 5184 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
4961 5185 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
4962 5186 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
4963 5187 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
4964 5188 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
4965 5189 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
4972 5196 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
4973 5197 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
4974 5198 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
4975 5199 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
4976 5200 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
4977 5201 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
4980 5204 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
4986 5210 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
4994 5218 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
5035 5259 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
5036 5260 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
5037 5261 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
5038 5262 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
5039 5263 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
5040 5264 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
5041 5265 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
5042 5266 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
5043 5267 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
5044 5268 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
5045 5269 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
5046 5270 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
5047 5271 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
5048 5272 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
5049 5273 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
5050 5274 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
5051 5275 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
5052 5276 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5053 5277 2.564062 TCCTCCGTCCGAAAATACTTGT 59.436 45.455 0.00 0.00 0.00 3.16
5054 5278 3.241067 TCCTCCGTCCGAAAATACTTG 57.759 47.619 0.00 0.00 0.00 3.16
5055 5279 3.260128 ACTTCCTCCGTCCGAAAATACTT 59.740 43.478 0.00 0.00 0.00 2.24
5056 5280 2.830321 ACTTCCTCCGTCCGAAAATACT 59.170 45.455 0.00 0.00 0.00 2.12
5057 5281 3.242549 ACTTCCTCCGTCCGAAAATAC 57.757 47.619 0.00 0.00 0.00 1.89
5058 5282 3.131046 GGTACTTCCTCCGTCCGAAAATA 59.869 47.826 0.00 0.00 0.00 1.40
5059 5283 2.093816 GGTACTTCCTCCGTCCGAAAAT 60.094 50.000 0.00 0.00 0.00 1.82
5060 5284 1.273327 GGTACTTCCTCCGTCCGAAAA 59.727 52.381 0.00 0.00 0.00 2.29
5061 5285 0.890683 GGTACTTCCTCCGTCCGAAA 59.109 55.000 0.00 0.00 0.00 3.46
5062 5286 0.038744 AGGTACTTCCTCCGTCCGAA 59.961 55.000 0.00 0.00 44.42 4.30
5063 5287 1.687612 AGGTACTTCCTCCGTCCGA 59.312 57.895 0.00 0.00 44.42 4.55
5064 5288 4.333417 AGGTACTTCCTCCGTCCG 57.667 61.111 0.00 0.00 44.42 4.79
5076 5300 4.220163 AGCTACACCACACTAAGAAGGTAC 59.780 45.833 0.00 0.00 32.01 3.34
5389 5631 4.241681 GCCAGCGATAATTTGTTTTTCCA 58.758 39.130 0.00 0.00 0.00 3.53
5390 5632 4.241681 TGCCAGCGATAATTTGTTTTTCC 58.758 39.130 0.00 0.00 0.00 3.13
5487 5733 5.588240 AGACAACGCATGATACTTATCGAA 58.412 37.500 0.00 0.00 35.48 3.71
5500 5746 7.941919 TCATACTTTCTAGATAGACAACGCAT 58.058 34.615 16.08 0.00 30.81 4.73
5517 5763 3.100671 AGGTTCTCGAGCCTCATACTTT 58.899 45.455 7.81 0.00 37.49 2.66
5593 5839 3.303329 CCAAACAGCCGATATGACGAATG 60.303 47.826 0.00 0.00 35.09 2.67
5598 5844 2.609459 CTGACCAAACAGCCGATATGAC 59.391 50.000 0.00 0.00 0.00 3.06
5619 5865 4.148174 GCGAACATGGAAAAGTAAACTTGC 59.852 41.667 0.00 0.00 36.12 4.01
5692 5945 2.295909 ACGCTCTCCTCATGATTCTAGC 59.704 50.000 0.00 3.12 0.00 3.42
5701 5954 0.965439 GCATCCTACGCTCTCCTCAT 59.035 55.000 0.00 0.00 0.00 2.90
5792 6045 4.040217 TGCATTGTTTAAACCAGGAATGCT 59.960 37.500 32.23 5.17 41.40 3.79
5814 6067 2.101917 GCCTTCCCCATTGATTGACATG 59.898 50.000 0.00 0.00 0.00 3.21
5821 6074 1.756690 GCTCATGCCTTCCCCATTGAT 60.757 52.381 0.00 0.00 0.00 2.57
5822 6075 0.396139 GCTCATGCCTTCCCCATTGA 60.396 55.000 0.00 0.00 0.00 2.57
5947 6200 2.028561 ATTCAAAATGGTGCCCAGGT 57.971 45.000 0.41 0.00 36.75 4.00
5950 6203 5.954153 ATGATAATTCAAAATGGTGCCCA 57.046 34.783 0.00 0.00 34.74 5.36
5951 6204 6.114767 ACAATGATAATTCAAAATGGTGCCC 58.885 36.000 0.00 0.00 34.96 5.36
5953 6206 8.483307 AGAACAATGATAATTCAAAATGGTGC 57.517 30.769 0.00 0.00 34.96 5.01
5968 6221 9.155975 GTGTTTCATACAGACTAGAACAATGAT 57.844 33.333 0.00 0.00 37.45 2.45
5970 6223 8.310406 TGTGTTTCATACAGACTAGAACAATG 57.690 34.615 0.00 0.00 37.45 2.82
5971 6224 8.150945 ACTGTGTTTCATACAGACTAGAACAAT 58.849 33.333 11.65 0.00 46.52 2.71
5974 6229 8.298140 ACTACTGTGTTTCATACAGACTAGAAC 58.702 37.037 11.65 0.00 46.52 3.01
5977 6232 7.911205 GCTACTACTGTGTTTCATACAGACTAG 59.089 40.741 11.65 6.67 46.52 2.57
5994 6249 4.128925 TGCAGATGAAAGGCTACTACTG 57.871 45.455 0.00 0.00 0.00 2.74
6024 6292 3.089284 ACTGGGCCAGTTTTAATAGTGC 58.911 45.455 33.18 0.00 42.59 4.40
6048 6317 3.204526 CAAGTTGAGATCTCAGGGATGC 58.795 50.000 23.92 11.88 41.13 3.91
6106 6382 3.194861 GTTTTTCACCCAGGTTTTCAGC 58.805 45.455 0.00 0.00 0.00 4.26
6176 6452 8.693120 AGATACTACTAGTGCAATAGCTGTAA 57.307 34.615 20.52 3.97 42.74 2.41
6188 6467 7.159322 ACAAGGACACAAGATACTACTAGTG 57.841 40.000 5.39 0.00 0.00 2.74
6192 6471 5.084519 TGGACAAGGACACAAGATACTACT 58.915 41.667 0.00 0.00 0.00 2.57
6193 6472 5.401531 TGGACAAGGACACAAGATACTAC 57.598 43.478 0.00 0.00 0.00 2.73
6194 6473 6.097839 GGTATGGACAAGGACACAAGATACTA 59.902 42.308 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.