Multiple sequence alignment - TraesCS3B01G449700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G449700 chr3B 100.000 4503 0 0 1 4503 690359883 690355381 0.000000e+00 8316.0
1 TraesCS3B01G449700 chr3B 87.290 1605 163 12 2842 4406 689985468 689983865 0.000000e+00 1796.0
2 TraesCS3B01G449700 chr3B 88.235 918 78 11 2404 3302 690113368 690112462 0.000000e+00 1070.0
3 TraesCS3B01G449700 chr3B 90.551 635 46 7 729 1353 690115582 690114952 0.000000e+00 828.0
4 TraesCS3B01G449700 chr3B 84.856 799 85 17 3490 4276 225453249 225452475 0.000000e+00 773.0
5 TraesCS3B01G449700 chr3B 90.310 516 40 4 800 1309 689992746 689992235 0.000000e+00 667.0
6 TraesCS3B01G449700 chr3B 86.546 498 56 7 2324 2819 689991553 689991065 5.130000e-149 538.0
7 TraesCS3B01G449700 chr3B 84.536 485 36 10 1363 1843 689992208 689991759 1.150000e-120 444.0
8 TraesCS3B01G449700 chr3B 93.836 292 17 1 1340 1630 690114998 690114707 5.350000e-119 438.0
9 TraesCS3B01G449700 chr3B 91.981 212 17 0 1953 2164 689991761 689991550 9.470000e-77 298.0
10 TraesCS3B01G449700 chr3B 82.963 270 40 6 1363 1628 690106228 690105961 5.820000e-59 239.0
11 TraesCS3B01G449700 chr3B 76.645 471 60 29 729 1161 690106801 690106343 9.810000e-52 215.0
12 TraesCS3B01G449700 chr3B 90.000 110 11 0 2035 2144 690114656 690114547 4.700000e-30 143.0
13 TraesCS3B01G449700 chr3B 95.000 40 1 1 3451 3489 225453315 225453276 1.350000e-05 62.1
14 TraesCS3B01G449700 chr3A 88.016 1018 111 7 3496 4503 658093757 658092741 0.000000e+00 1194.0
15 TraesCS3B01G449700 chr3A 88.290 854 72 13 2665 3493 658094638 658093788 0.000000e+00 998.0
16 TraesCS3B01G449700 chr3A 89.606 635 50 10 729 1353 658096986 658096358 0.000000e+00 793.0
17 TraesCS3B01G449700 chr3A 87.728 383 26 14 1340 1722 658096404 658096043 1.160000e-115 427.0
18 TraesCS3B01G449700 chr3A 82.838 303 31 17 2378 2672 658095166 658094877 7.480000e-63 252.0
19 TraesCS3B01G449700 chr3A 92.366 131 8 2 1726 1855 658095956 658095827 7.690000e-43 185.0
20 TraesCS3B01G449700 chr7A 87.537 1027 111 11 3490 4503 7668222 7667200 0.000000e+00 1171.0
21 TraesCS3B01G449700 chr7A 91.667 72 5 1 3419 3489 7668320 7668249 1.030000e-16 99.0
22 TraesCS3B01G449700 chr7A 83.133 83 14 0 502 584 243222715 243222797 4.830000e-10 76.8
23 TraesCS3B01G449700 chr7D 87.439 1027 111 11 3490 4503 6581768 6580747 0.000000e+00 1166.0
24 TraesCS3B01G449700 chr7D 82.822 326 53 3 67 391 216004983 216005306 5.700000e-74 289.0
25 TraesCS3B01G449700 chr7D 95.758 165 7 0 2163 2327 51589500 51589664 2.670000e-67 267.0
26 TraesCS3B01G449700 chr7D 95.758 165 7 0 2163 2327 226808774 226808938 2.670000e-67 267.0
27 TraesCS3B01G449700 chr7D 95.758 165 7 0 2163 2327 258810786 258810622 2.670000e-67 267.0
28 TraesCS3B01G449700 chr7D 81.319 91 13 4 460 547 287596208 287596119 2.250000e-08 71.3
29 TraesCS3B01G449700 chr7D 94.286 35 2 0 3459 3493 6581832 6581798 2.000000e-03 54.7
30 TraesCS3B01G449700 chr4A 86.999 1023 112 16 3490 4497 733662023 733663039 0.000000e+00 1133.0
31 TraesCS3B01G449700 chr4A 86.710 617 69 7 3499 4104 415470113 415469499 0.000000e+00 673.0
32 TraesCS3B01G449700 chr4A 92.000 75 6 0 3419 3493 415579126 415579052 6.160000e-19 106.0
33 TraesCS3B01G449700 chr4A 92.958 71 5 0 3419 3489 733644975 733645045 2.220000e-18 104.0
34 TraesCS3B01G449700 chr3D 86.273 1049 103 19 2404 3430 523317267 523316238 0.000000e+00 1101.0
35 TraesCS3B01G449700 chr3D 90.922 683 45 10 683 1353 523318886 523318209 0.000000e+00 902.0
36 TraesCS3B01G449700 chr3D 85.884 588 70 9 1 584 523319482 523318904 8.280000e-172 614.0
37 TraesCS3B01G449700 chr3D 84.444 540 43 16 1340 1869 523318255 523317747 1.130000e-135 494.0
38 TraesCS3B01G449700 chr3D 87.692 325 28 8 1873 2189 523317666 523317346 7.120000e-98 368.0
39 TraesCS3B01G449700 chr3D 84.196 367 34 6 801 1161 523309252 523308904 7.220000e-88 335.0
40 TraesCS3B01G449700 chr3D 95.758 165 7 0 2163 2327 289524609 289524445 2.670000e-67 267.0
41 TraesCS3B01G449700 chr3D 95.758 165 7 0 2163 2327 528052175 528052011 2.670000e-67 267.0
42 TraesCS3B01G449700 chr3D 80.429 373 50 17 1379 1739 523307775 523307414 3.450000e-66 263.0
43 TraesCS3B01G449700 chr3D 84.049 163 22 4 1469 1628 523308730 523308569 2.170000e-33 154.0
44 TraesCS3B01G449700 chr3D 90.526 95 9 0 1184 1278 523307874 523307780 4.730000e-25 126.0
45 TraesCS3B01G449700 chr3D 92.222 90 5 2 2324 2413 523317373 523317286 4.730000e-25 126.0
46 TraesCS3B01G449700 chr7B 86.200 1029 107 22 3490 4503 666516387 666517395 0.000000e+00 1081.0
47 TraesCS3B01G449700 chr7B 86.938 467 50 7 3490 3947 666509844 666510308 8.640000e-142 514.0
48 TraesCS3B01G449700 chr7B 95.758 165 7 0 2163 2327 206928885 206929049 2.670000e-67 267.0
49 TraesCS3B01G449700 chr2A 88.791 678 69 6 3830 4503 563200677 563201351 0.000000e+00 824.0
50 TraesCS3B01G449700 chr2A 88.608 158 14 2 2412 2568 350732329 350732483 5.950000e-44 189.0
51 TraesCS3B01G449700 chr4B 81.647 583 88 9 14 584 456397997 456397422 2.450000e-127 466.0
52 TraesCS3B01G449700 chr4B 77.931 145 29 3 442 584 416270400 416270543 2.230000e-13 87.9
53 TraesCS3B01G449700 chr6B 80.702 456 76 8 62 514 643170769 643170323 1.200000e-90 344.0
54 TraesCS3B01G449700 chr6B 86.747 166 18 2 2404 2568 153681016 153680854 9.950000e-42 182.0
55 TraesCS3B01G449700 chr5B 96.364 165 6 0 2163 2327 146139416 146139252 5.740000e-69 272.0
56 TraesCS3B01G449700 chr2D 95.758 165 7 0 2163 2327 78267063 78266899 2.670000e-67 267.0
57 TraesCS3B01G449700 chr2D 95.758 165 7 0 2163 2327 494277153 494277317 2.670000e-67 267.0
58 TraesCS3B01G449700 chr2D 87.425 167 17 2 2404 2569 28604878 28605041 5.950000e-44 189.0
59 TraesCS3B01G449700 chr2D 88.608 158 14 2 2412 2568 271511926 271511772 5.950000e-44 189.0
60 TraesCS3B01G449700 chr2D 76.630 184 40 3 3636 3818 314075278 314075459 1.030000e-16 99.0
61 TraesCS3B01G449700 chr2B 90.361 166 11 3 2404 2568 58672879 58672718 3.530000e-51 213.0
62 TraesCS3B01G449700 chr6D 86.747 166 18 2 2404 2568 80517613 80517451 9.950000e-42 182.0
63 TraesCS3B01G449700 chr6D 80.000 90 16 2 460 547 331877683 331877772 1.050000e-06 65.8
64 TraesCS3B01G449700 chr5D 87.952 83 8 2 502 583 520788726 520788645 3.710000e-16 97.1
65 TraesCS3B01G449700 chrUn 85.185 81 8 4 502 580 126962869 126962791 3.730000e-11 80.5
66 TraesCS3B01G449700 chr5A 86.364 66 9 0 502 567 102525413 102525348 6.250000e-09 73.1
67 TraesCS3B01G449700 chr5A 80.682 88 14 2 443 527 699316239 699316326 1.050000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G449700 chr3B 690355381 690359883 4502 True 8316.000000 8316 100.000000 1 4503 1 chr3B.!!$R2 4502
1 TraesCS3B01G449700 chr3B 689983865 689985468 1603 True 1796.000000 1796 87.290000 2842 4406 1 chr3B.!!$R1 1564
2 TraesCS3B01G449700 chr3B 690112462 690115582 3120 True 619.750000 1070 90.655500 729 3302 4 chr3B.!!$R6 2573
3 TraesCS3B01G449700 chr3B 689991065 689992746 1681 True 486.750000 667 88.343250 800 2819 4 chr3B.!!$R4 2019
4 TraesCS3B01G449700 chr3B 225452475 225453315 840 True 417.550000 773 89.928000 3451 4276 2 chr3B.!!$R3 825
5 TraesCS3B01G449700 chr3B 690105961 690106801 840 True 227.000000 239 79.804000 729 1628 2 chr3B.!!$R5 899
6 TraesCS3B01G449700 chr3A 658092741 658096986 4245 True 641.500000 1194 88.140667 729 4503 6 chr3A.!!$R1 3774
7 TraesCS3B01G449700 chr7A 7667200 7668320 1120 True 635.000000 1171 89.602000 3419 4503 2 chr7A.!!$R1 1084
8 TraesCS3B01G449700 chr7D 6580747 6581832 1085 True 610.350000 1166 90.862500 3459 4503 2 chr7D.!!$R3 1044
9 TraesCS3B01G449700 chr4A 733662023 733663039 1016 False 1133.000000 1133 86.999000 3490 4497 1 chr4A.!!$F2 1007
10 TraesCS3B01G449700 chr4A 415469499 415470113 614 True 673.000000 673 86.710000 3499 4104 1 chr4A.!!$R1 605
11 TraesCS3B01G449700 chr3D 523316238 523319482 3244 True 600.833333 1101 87.906167 1 3430 6 chr3D.!!$R4 3429
12 TraesCS3B01G449700 chr3D 523307414 523309252 1838 True 219.500000 335 84.800000 801 1739 4 chr3D.!!$R3 938
13 TraesCS3B01G449700 chr7B 666516387 666517395 1008 False 1081.000000 1081 86.200000 3490 4503 1 chr7B.!!$F3 1013
14 TraesCS3B01G449700 chr2A 563200677 563201351 674 False 824.000000 824 88.791000 3830 4503 1 chr2A.!!$F2 673
15 TraesCS3B01G449700 chr4B 456397422 456397997 575 True 466.000000 466 81.647000 14 584 1 chr4B.!!$R1 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
604 618 0.034059 AGCCGCTAGATTTCATCCGG 59.966 55.0 0.00 0.0 35.57 5.14 F
612 626 0.101219 GATTTCATCCGGCCAGTTGC 59.899 55.0 2.24 0.0 40.16 4.17 F
666 680 0.246086 GCGGATGGATGCCAAAACAA 59.754 50.0 0.00 0.0 36.95 2.83 F
1602 2672 0.321671 CAGTTCCATCACGGTGACCT 59.678 55.0 13.92 0.0 35.57 3.85 F
2132 3397 0.032952 ACTTTTCTGGCTGACGCGTA 59.967 50.0 13.97 0.0 36.88 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1878 3137 0.901124 GAGCAGTGACAGAGGATGGT 59.099 55.000 0.00 0.00 0.00 3.55 R
1900 3159 1.007387 CCGGGTGAAAAGCAACTGC 60.007 57.895 0.00 0.00 39.36 4.40 R
2123 3388 1.404391 ACTAATGAGGGTACGCGTCAG 59.596 52.381 18.63 2.71 0.00 3.51 R
3289 6158 0.322906 AGCCCAACTTAGCAGAAGCC 60.323 55.000 0.00 0.00 43.56 4.35 R
3827 6730 0.035534 TGTAGAATGTGCCACGCCAT 60.036 50.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 2.035469 TGTGGCCGCAATGGATGT 59.965 55.556 18.77 0.00 42.00 3.06
48 49 1.996786 CTGTGGCCGCAATGGATGTC 61.997 60.000 21.56 0.00 42.00 3.06
62 63 1.665544 GATGTCGCTGTGTCGTCACG 61.666 60.000 8.24 0.00 46.49 4.35
89 91 2.359975 GCCTTTGGCCGTGCTAGT 60.360 61.111 0.00 0.00 44.06 2.57
98 100 2.885644 CGTGCTAGTCGCCGCAAT 60.886 61.111 0.00 0.00 37.97 3.56
113 117 1.903783 GCAATCGTTGGCGTAACCGT 61.904 55.000 0.22 0.00 43.94 4.83
123 127 2.699768 CGTAACCGTGCCCTACCGA 61.700 63.158 0.00 0.00 0.00 4.69
149 154 3.419759 GCCAACACGTCCGCGATT 61.420 61.111 8.23 0.00 42.00 3.34
180 185 4.466370 ACATCGAGGAAAAGTAGACCATGA 59.534 41.667 3.06 0.00 0.00 3.07
203 208 1.302832 CAGCCGCCTCTTTTGTCCT 60.303 57.895 0.00 0.00 0.00 3.85
218 223 1.610967 TCCTACGATGGCCACCACA 60.611 57.895 8.16 0.00 35.80 4.17
273 278 1.375908 GGTTCAGCGCAGGTCATCA 60.376 57.895 11.47 0.00 33.74 3.07
276 281 0.249955 TTCAGCGCAGGTCATCATCA 59.750 50.000 11.47 0.00 33.74 3.07
326 331 2.284699 CCACTCTTCCCCTCCGGT 60.285 66.667 0.00 0.00 0.00 5.28
386 391 1.439543 AGGAAGATATGGTGGAGGCC 58.560 55.000 0.00 0.00 0.00 5.19
387 392 0.035458 GGAAGATATGGTGGAGGCCG 59.965 60.000 0.00 0.00 0.00 6.13
388 393 1.048601 GAAGATATGGTGGAGGCCGA 58.951 55.000 0.00 0.00 0.00 5.54
389 394 1.001406 GAAGATATGGTGGAGGCCGAG 59.999 57.143 0.00 0.00 0.00 4.63
390 395 0.833834 AGATATGGTGGAGGCCGAGG 60.834 60.000 0.00 0.00 0.00 4.63
437 442 4.800554 CAGAGTTGGACCGGCTTT 57.199 55.556 0.00 0.00 0.00 3.51
489 495 5.800941 GTGATGATCTCGTCCGGTTTATATC 59.199 44.000 0.00 1.64 0.00 1.63
497 511 3.982701 CGTCCGGTTTATATCAATACGCA 59.017 43.478 0.00 0.00 0.00 5.24
529 543 6.620678 CATGAATTTTGTCCGGTTAGTTCAT 58.379 36.000 0.00 8.75 35.97 2.57
534 548 3.241067 TGTCCGGTTAGTTCATACAGC 57.759 47.619 0.00 0.00 0.00 4.40
547 561 5.121768 AGTTCATACAGCGGTTGAAATGTAC 59.878 40.000 13.06 6.30 31.41 2.90
548 562 4.570930 TCATACAGCGGTTGAAATGTACA 58.429 39.130 0.00 0.00 31.41 2.90
551 565 3.146066 ACAGCGGTTGAAATGTACACAT 58.854 40.909 0.00 0.00 38.41 3.21
553 567 3.058293 CAGCGGTTGAAATGTACACATGT 60.058 43.478 0.00 0.00 36.56 3.21
569 583 0.107214 ATGTAGTGTTGGATGGCCGG 60.107 55.000 0.00 0.00 36.79 6.13
584 598 3.190849 CGGCTCACGCATCAGTGG 61.191 66.667 0.00 0.00 42.10 4.00
585 599 2.265739 GGCTCACGCATCAGTGGA 59.734 61.111 0.00 0.00 42.10 4.02
586 600 1.812922 GGCTCACGCATCAGTGGAG 60.813 63.158 0.00 0.00 42.10 3.86
587 601 2.459442 GCTCACGCATCAGTGGAGC 61.459 63.158 0.00 0.00 42.10 4.70
588 602 1.812922 CTCACGCATCAGTGGAGCC 60.813 63.158 0.00 0.00 42.10 4.70
589 603 3.190849 CACGCATCAGTGGAGCCG 61.191 66.667 0.00 0.00 38.40 5.52
591 605 4.827087 CGCATCAGTGGAGCCGCT 62.827 66.667 0.00 0.00 37.24 5.52
592 606 2.501128 GCATCAGTGGAGCCGCTA 59.499 61.111 1.69 0.00 34.71 4.26
593 607 1.593750 GCATCAGTGGAGCCGCTAG 60.594 63.158 1.69 0.00 34.71 3.42
594 608 2.021068 GCATCAGTGGAGCCGCTAGA 62.021 60.000 1.69 3.86 34.71 2.43
595 609 0.678395 CATCAGTGGAGCCGCTAGAT 59.322 55.000 1.69 5.88 34.71 1.98
596 610 1.069823 CATCAGTGGAGCCGCTAGATT 59.930 52.381 1.69 0.00 34.71 2.40
597 611 1.195115 TCAGTGGAGCCGCTAGATTT 58.805 50.000 1.69 0.00 34.71 2.17
598 612 1.137086 TCAGTGGAGCCGCTAGATTTC 59.863 52.381 1.69 0.00 34.71 2.17
599 613 1.134699 CAGTGGAGCCGCTAGATTTCA 60.135 52.381 1.69 0.00 34.71 2.69
600 614 1.765314 AGTGGAGCCGCTAGATTTCAT 59.235 47.619 0.00 0.00 34.71 2.57
601 615 2.139118 GTGGAGCCGCTAGATTTCATC 58.861 52.381 0.00 0.00 0.00 2.92
602 616 1.070758 TGGAGCCGCTAGATTTCATCC 59.929 52.381 0.00 0.00 0.00 3.51
603 617 1.423395 GAGCCGCTAGATTTCATCCG 58.577 55.000 0.00 0.00 0.00 4.18
604 618 0.034059 AGCCGCTAGATTTCATCCGG 59.966 55.000 0.00 0.00 35.57 5.14
605 619 1.569479 GCCGCTAGATTTCATCCGGC 61.569 60.000 9.79 9.79 45.40 6.13
606 620 0.951040 CCGCTAGATTTCATCCGGCC 60.951 60.000 0.00 0.00 0.00 6.13
607 621 0.249868 CGCTAGATTTCATCCGGCCA 60.250 55.000 2.24 0.00 0.00 5.36
608 622 1.517242 GCTAGATTTCATCCGGCCAG 58.483 55.000 2.24 0.00 0.00 4.85
609 623 1.202698 GCTAGATTTCATCCGGCCAGT 60.203 52.381 2.24 0.00 0.00 4.00
610 624 2.746472 GCTAGATTTCATCCGGCCAGTT 60.746 50.000 2.24 0.00 0.00 3.16
611 625 1.755179 AGATTTCATCCGGCCAGTTG 58.245 50.000 2.24 0.00 0.00 3.16
612 626 0.101219 GATTTCATCCGGCCAGTTGC 59.899 55.000 2.24 0.00 40.16 4.17
613 627 0.323725 ATTTCATCCGGCCAGTTGCT 60.324 50.000 2.24 0.00 40.92 3.91
614 628 1.243342 TTTCATCCGGCCAGTTGCTG 61.243 55.000 2.24 0.00 46.56 4.41
615 629 3.818787 CATCCGGCCAGTTGCTGC 61.819 66.667 2.24 0.00 45.58 5.25
616 630 4.349503 ATCCGGCCAGTTGCTGCA 62.350 61.111 2.24 0.00 45.58 4.41
617 631 3.650298 ATCCGGCCAGTTGCTGCAT 62.650 57.895 1.84 0.00 45.58 3.96
618 632 4.124351 CCGGCCAGTTGCTGCATG 62.124 66.667 1.84 0.00 45.58 4.06
619 633 3.057548 CGGCCAGTTGCTGCATGA 61.058 61.111 1.84 0.00 40.07 3.07
620 634 2.628696 CGGCCAGTTGCTGCATGAA 61.629 57.895 1.84 0.00 40.07 2.57
621 635 1.895238 GGCCAGTTGCTGCATGAAT 59.105 52.632 1.84 0.00 40.92 2.57
622 636 0.248289 GGCCAGTTGCTGCATGAATT 59.752 50.000 1.84 0.00 40.92 2.17
623 637 1.338389 GGCCAGTTGCTGCATGAATTT 60.338 47.619 1.84 0.00 40.92 1.82
624 638 2.419667 GCCAGTTGCTGCATGAATTTT 58.580 42.857 1.84 0.00 36.87 1.82
625 639 2.158841 GCCAGTTGCTGCATGAATTTTG 59.841 45.455 1.84 0.00 36.87 2.44
626 640 3.395639 CCAGTTGCTGCATGAATTTTGT 58.604 40.909 1.84 0.00 0.00 2.83
637 651 6.233434 TGCATGAATTTTGTCTGACTAGTCT 58.767 36.000 23.01 0.00 0.00 3.24
638 652 6.712095 TGCATGAATTTTGTCTGACTAGTCTT 59.288 34.615 23.01 6.92 0.00 3.01
639 653 7.229306 TGCATGAATTTTGTCTGACTAGTCTTT 59.771 33.333 23.01 4.92 0.00 2.52
640 654 8.721478 GCATGAATTTTGTCTGACTAGTCTTTA 58.279 33.333 23.01 6.38 0.00 1.85
647 661 6.922247 TGTCTGACTAGTCTTTACTATCCG 57.078 41.667 23.01 0.62 37.57 4.18
648 662 5.296283 TGTCTGACTAGTCTTTACTATCCGC 59.704 44.000 23.01 0.00 37.57 5.54
649 663 4.510711 TCTGACTAGTCTTTACTATCCGCG 59.489 45.833 23.01 0.00 37.57 6.46
650 664 3.562973 TGACTAGTCTTTACTATCCGCGG 59.437 47.826 22.12 22.12 37.57 6.46
651 665 3.812053 GACTAGTCTTTACTATCCGCGGA 59.188 47.826 33.12 33.12 37.57 5.54
653 667 3.644884 AGTCTTTACTATCCGCGGATG 57.355 47.619 43.28 33.65 36.17 3.51
654 668 2.296471 AGTCTTTACTATCCGCGGATGG 59.704 50.000 43.28 41.57 38.76 3.51
655 669 2.295349 GTCTTTACTATCCGCGGATGGA 59.705 50.000 45.57 30.92 43.58 3.41
660 674 3.559263 ATCCGCGGATGGATGCCA 61.559 61.111 38.62 10.21 47.00 4.92
661 675 3.118768 ATCCGCGGATGGATGCCAA 62.119 57.895 38.62 9.34 47.00 4.52
662 676 2.623094 ATCCGCGGATGGATGCCAAA 62.623 55.000 38.62 8.74 47.00 3.28
663 677 2.413963 CCGCGGATGGATGCCAAAA 61.414 57.895 24.07 0.00 36.95 2.44
664 678 1.226660 CGCGGATGGATGCCAAAAC 60.227 57.895 0.00 0.00 36.95 2.43
665 679 1.889454 GCGGATGGATGCCAAAACA 59.111 52.632 0.00 0.00 36.95 2.83
666 680 0.246086 GCGGATGGATGCCAAAACAA 59.754 50.000 0.00 0.00 36.95 2.83
667 681 1.337635 GCGGATGGATGCCAAAACAAA 60.338 47.619 0.00 0.00 36.95 2.83
668 682 2.677613 GCGGATGGATGCCAAAACAAAT 60.678 45.455 0.00 0.00 36.95 2.32
669 683 3.598299 CGGATGGATGCCAAAACAAATT 58.402 40.909 0.00 0.00 36.95 1.82
670 684 4.002316 CGGATGGATGCCAAAACAAATTT 58.998 39.130 0.00 0.00 36.95 1.82
671 685 4.142859 CGGATGGATGCCAAAACAAATTTG 60.143 41.667 16.67 16.67 46.54 2.32
672 686 4.379708 GGATGGATGCCAAAACAAATTTGC 60.380 41.667 18.12 3.57 45.79 3.68
673 687 2.547211 TGGATGCCAAAACAAATTTGCG 59.453 40.909 18.12 4.52 45.79 4.85
674 688 2.095819 GGATGCCAAAACAAATTTGCGG 60.096 45.455 18.12 13.73 45.79 5.69
675 689 1.303309 TGCCAAAACAAATTTGCGGG 58.697 45.000 18.12 14.24 45.79 6.13
676 690 1.304254 GCCAAAACAAATTTGCGGGT 58.696 45.000 18.12 0.00 45.79 5.28
677 691 1.673400 GCCAAAACAAATTTGCGGGTT 59.327 42.857 18.12 2.06 45.79 4.11
678 692 2.872858 GCCAAAACAAATTTGCGGGTTA 59.127 40.909 18.12 0.00 45.79 2.85
679 693 3.312697 GCCAAAACAAATTTGCGGGTTAA 59.687 39.130 18.12 0.00 45.79 2.01
680 694 4.786927 GCCAAAACAAATTTGCGGGTTAAC 60.787 41.667 18.12 0.00 45.79 2.01
681 695 4.332819 CCAAAACAAATTTGCGGGTTAACA 59.667 37.500 18.12 0.00 45.79 2.41
682 696 5.008118 CCAAAACAAATTTGCGGGTTAACAT 59.992 36.000 18.12 0.00 45.79 2.71
683 697 6.458888 CCAAAACAAATTTGCGGGTTAACATT 60.459 34.615 18.12 0.00 45.79 2.71
684 698 5.665381 AACAAATTTGCGGGTTAACATTG 57.335 34.783 18.12 0.00 0.00 2.82
685 699 4.061596 ACAAATTTGCGGGTTAACATTGG 58.938 39.130 18.12 0.00 0.00 3.16
686 700 4.202264 ACAAATTTGCGGGTTAACATTGGA 60.202 37.500 18.12 0.00 0.00 3.53
687 701 3.866883 ATTTGCGGGTTAACATTGGAG 57.133 42.857 8.10 0.00 0.00 3.86
688 702 2.570415 TTGCGGGTTAACATTGGAGA 57.430 45.000 8.10 0.00 0.00 3.71
689 703 2.799126 TGCGGGTTAACATTGGAGAT 57.201 45.000 8.10 0.00 0.00 2.75
690 704 2.364632 TGCGGGTTAACATTGGAGATG 58.635 47.619 8.10 0.00 0.00 2.90
691 705 1.065551 GCGGGTTAACATTGGAGATGC 59.934 52.381 8.10 0.00 0.00 3.91
692 706 1.676006 CGGGTTAACATTGGAGATGCC 59.324 52.381 8.10 0.00 37.10 4.40
706 720 1.484240 AGATGCCAAGAGTCAGGTAGC 59.516 52.381 3.89 2.32 0.00 3.58
712 726 2.350522 CAAGAGTCAGGTAGCGCAAAT 58.649 47.619 11.47 0.00 0.00 2.32
762 781 1.210478 AGATTAGCGCCAGGTCATGTT 59.790 47.619 2.29 0.00 0.00 2.71
823 850 2.386661 ACTGAATAGTGGGCAACTCG 57.613 50.000 0.00 0.00 40.56 4.18
844 872 2.673368 GGAACATGTTACTTGAGAGCCG 59.327 50.000 13.89 0.00 0.00 5.52
866 898 5.700832 CCGATCTACCAATATTTTGCAGCTA 59.299 40.000 0.00 0.00 0.00 3.32
1013 1076 3.940221 CCCGTTAATCGAACCCAAATACA 59.060 43.478 0.00 0.00 42.86 2.29
1014 1077 4.034742 CCCGTTAATCGAACCCAAATACAG 59.965 45.833 0.00 0.00 42.86 2.74
1015 1078 4.632688 CCGTTAATCGAACCCAAATACAGT 59.367 41.667 0.00 0.00 42.86 3.55
1151 1214 4.742201 CCCTCACGCCCAGTCACG 62.742 72.222 0.00 0.00 0.00 4.35
1241 2311 4.147449 CCCTGCGCCATCTCGTCA 62.147 66.667 4.18 0.00 0.00 4.35
1284 2354 2.203126 GGAATCCAGCGGCTCCTG 60.203 66.667 0.00 0.00 0.00 3.86
1311 2381 2.821366 GGACTCCTACCGCGACGA 60.821 66.667 8.23 0.00 0.00 4.20
1312 2382 2.402787 GACTCCTACCGCGACGAC 59.597 66.667 8.23 0.00 0.00 4.34
1336 2406 4.156622 GCGGACGGGCGCTTTTAC 62.157 66.667 7.64 0.00 0.00 2.01
1337 2407 3.845472 CGGACGGGCGCTTTTACG 61.845 66.667 7.64 7.39 0.00 3.18
1338 2408 2.739671 GGACGGGCGCTTTTACGT 60.740 61.111 7.64 10.77 42.88 3.57
1339 2409 2.774126 GACGGGCGCTTTTACGTC 59.226 61.111 19.39 19.39 46.89 4.34
1340 2410 3.063052 GACGGGCGCTTTTACGTCG 62.063 63.158 19.39 9.53 44.76 5.12
1341 2411 2.806198 CGGGCGCTTTTACGTCGA 60.806 61.111 7.64 0.00 38.93 4.20
1342 2412 2.774126 GGGCGCTTTTACGTCGAC 59.226 61.111 7.64 5.18 38.93 4.20
1343 2413 2.389143 GGCGCTTTTACGTCGACG 59.611 61.111 34.58 34.58 46.33 5.12
1344 2414 2.082366 GGCGCTTTTACGTCGACGA 61.082 57.895 41.52 23.28 43.02 4.20
1345 2415 1.054785 GCGCTTTTACGTCGACGAC 59.945 57.895 41.52 18.04 43.02 4.34
1597 2667 1.296715 GGAGCAGTTCCATCACGGT 59.703 57.895 0.00 0.00 46.01 4.83
1602 2672 0.321671 CAGTTCCATCACGGTGACCT 59.678 55.000 13.92 0.00 35.57 3.85
1605 2675 1.052617 TTCCATCACGGTGACCTCAA 58.947 50.000 13.92 1.48 35.57 3.02
1631 2701 7.037873 ACAGTAAACTCCTTCTCTCTCTCTCTA 60.038 40.741 0.00 0.00 0.00 2.43
1634 2718 6.831664 AACTCCTTCTCTCTCTCTCTATCT 57.168 41.667 0.00 0.00 0.00 1.98
1637 2721 7.306013 ACTCCTTCTCTCTCTCTCTATCTCTA 58.694 42.308 0.00 0.00 0.00 2.43
1638 2722 7.958583 ACTCCTTCTCTCTCTCTCTATCTCTAT 59.041 40.741 0.00 0.00 0.00 1.98
1639 2723 8.367660 TCCTTCTCTCTCTCTCTATCTCTATC 57.632 42.308 0.00 0.00 0.00 2.08
1640 2724 7.400339 TCCTTCTCTCTCTCTCTATCTCTATCC 59.600 44.444 0.00 0.00 0.00 2.59
1643 2727 7.950803 TCTCTCTCTCTCTATCTCTATCCCTA 58.049 42.308 0.00 0.00 0.00 3.53
1647 2731 9.218525 CTCTCTCTCTATCTCTATCCCTATCTT 57.781 40.741 0.00 0.00 0.00 2.40
1653 2737 8.153221 TCTATCTCTATCCCTATCTTTCTCGT 57.847 38.462 0.00 0.00 0.00 4.18
1657 2741 7.691213 TCTCTATCCCTATCTTTCTCGTACAT 58.309 38.462 0.00 0.00 0.00 2.29
1722 2807 8.745749 TACATCACTGTGAGAGCCAGATTTGG 62.746 46.154 16.46 0.00 41.00 3.28
1724 2809 2.082231 CTGTGAGAGCCAGATTTGGTG 58.918 52.381 3.90 0.00 46.80 4.17
1755 2923 3.735746 CCGAGTTTTGGCAAAAGAACATC 59.264 43.478 24.69 15.67 0.00 3.06
1815 2992 8.634444 AGAGAGTACAAAGTATGGATATGTGAC 58.366 37.037 0.00 0.00 0.00 3.67
1856 3033 6.868339 TGGCTCACTATTTGATATACATCACG 59.132 38.462 0.00 0.00 40.94 4.35
1858 3035 6.311445 GCTCACTATTTGATATACATCACGGG 59.689 42.308 0.00 0.00 40.94 5.28
1866 3043 7.418337 TTGATATACATCACGGGCACTATAT 57.582 36.000 0.00 0.00 40.94 0.86
1869 3046 3.838244 ACATCACGGGCACTATATTGT 57.162 42.857 0.00 0.00 0.00 2.71
1871 3048 5.483685 ACATCACGGGCACTATATTGTAT 57.516 39.130 0.00 0.00 0.00 2.29
1874 3051 5.801531 TCACGGGCACTATATTGTATTCT 57.198 39.130 0.00 0.00 0.00 2.40
1878 3137 7.231925 TCACGGGCACTATATTGTATTCTAGAA 59.768 37.037 7.82 7.82 0.00 2.10
1881 3140 7.524863 CGGGCACTATATTGTATTCTAGAACCA 60.525 40.741 7.48 4.95 0.00 3.67
1889 3148 7.682787 ATTGTATTCTAGAACCATCCTCTGT 57.317 36.000 7.48 0.00 0.00 3.41
1900 3159 2.361757 CCATCCTCTGTCACTGCTCTAG 59.638 54.545 0.00 0.00 0.00 2.43
1996 3261 9.631452 ATTTTCTAAGCTAAGAAGTTCAAATGC 57.369 29.630 5.50 4.09 36.85 3.56
2055 3320 9.971744 CAAAAAGGAATTTGTTAGTTGTTTCTG 57.028 29.630 0.00 0.00 35.93 3.02
2109 3374 3.882888 GCATATCCCGAAATGAAACTCCA 59.117 43.478 0.00 0.00 0.00 3.86
2120 3385 7.119846 CCGAAATGAAACTCCATAGACTTTTCT 59.880 37.037 0.00 0.00 35.66 2.52
2123 3388 5.003804 TGAAACTCCATAGACTTTTCTGGC 58.996 41.667 0.00 0.00 32.75 4.85
2129 3394 2.080286 TAGACTTTTCTGGCTGACGC 57.920 50.000 0.00 0.00 32.75 5.19
2132 3397 0.032952 ACTTTTCTGGCTGACGCGTA 59.967 50.000 13.97 0.00 36.88 4.42
2188 4513 8.794335 ACTTCCTCTGTTCCTAAATATTTGTC 57.206 34.615 11.05 0.00 0.00 3.18
2189 4514 8.606830 ACTTCCTCTGTTCCTAAATATTTGTCT 58.393 33.333 11.05 0.00 0.00 3.41
2190 4515 9.454859 CTTCCTCTGTTCCTAAATATTTGTCTT 57.545 33.333 11.05 0.00 0.00 3.01
2191 4516 9.807921 TTCCTCTGTTCCTAAATATTTGTCTTT 57.192 29.630 11.05 0.00 0.00 2.52
2192 4517 9.449719 TCCTCTGTTCCTAAATATTTGTCTTTC 57.550 33.333 11.05 0.00 0.00 2.62
2193 4518 9.454859 CCTCTGTTCCTAAATATTTGTCTTTCT 57.545 33.333 11.05 0.00 0.00 2.52
2220 4545 9.825972 AAAGATTTCAACAAATGACTACATACG 57.174 29.630 0.00 0.00 37.92 3.06
2221 4546 8.771920 AGATTTCAACAAATGACTACATACGA 57.228 30.769 0.00 0.00 37.92 3.43
2222 4547 9.214957 AGATTTCAACAAATGACTACATACGAA 57.785 29.630 0.00 0.00 37.92 3.85
2223 4548 9.478019 GATTTCAACAAATGACTACATACGAAG 57.522 33.333 0.00 0.00 37.92 3.79
2224 4549 6.403333 TCAACAAATGACTACATACGAAGC 57.597 37.500 0.00 0.00 35.50 3.86
2225 4550 5.929415 TCAACAAATGACTACATACGAAGCA 59.071 36.000 0.00 0.00 35.50 3.91
2226 4551 6.425417 TCAACAAATGACTACATACGAAGCAA 59.575 34.615 0.00 0.00 35.50 3.91
2227 4552 6.795098 ACAAATGACTACATACGAAGCAAA 57.205 33.333 0.00 0.00 35.50 3.68
2228 4553 7.197071 ACAAATGACTACATACGAAGCAAAA 57.803 32.000 0.00 0.00 35.50 2.44
2229 4554 7.816640 ACAAATGACTACATACGAAGCAAAAT 58.183 30.769 0.00 0.00 35.50 1.82
2230 4555 7.750458 ACAAATGACTACATACGAAGCAAAATG 59.250 33.333 0.00 0.00 35.50 2.32
2231 4556 7.609760 AATGACTACATACGAAGCAAAATGA 57.390 32.000 0.00 0.00 35.50 2.57
2232 4557 7.609760 ATGACTACATACGAAGCAAAATGAA 57.390 32.000 0.00 0.00 34.71 2.57
2233 4558 7.609760 TGACTACATACGAAGCAAAATGAAT 57.390 32.000 0.00 0.00 0.00 2.57
2234 4559 7.463544 TGACTACATACGAAGCAAAATGAATG 58.536 34.615 0.00 0.00 0.00 2.67
2235 4560 7.333174 TGACTACATACGAAGCAAAATGAATGA 59.667 33.333 0.00 0.00 0.00 2.57
2236 4561 8.039603 ACTACATACGAAGCAAAATGAATGAA 57.960 30.769 0.00 0.00 0.00 2.57
2237 4562 8.677300 ACTACATACGAAGCAAAATGAATGAAT 58.323 29.630 0.00 0.00 0.00 2.57
2238 4563 7.975866 ACATACGAAGCAAAATGAATGAATC 57.024 32.000 0.00 0.00 0.00 2.52
2239 4564 7.765307 ACATACGAAGCAAAATGAATGAATCT 58.235 30.769 0.00 0.00 0.00 2.40
2240 4565 8.892723 ACATACGAAGCAAAATGAATGAATCTA 58.107 29.630 0.00 0.00 0.00 1.98
2241 4566 9.162793 CATACGAAGCAAAATGAATGAATCTAC 57.837 33.333 0.00 0.00 0.00 2.59
2242 4567 7.144722 ACGAAGCAAAATGAATGAATCTACA 57.855 32.000 0.00 0.00 0.00 2.74
2243 4568 7.765307 ACGAAGCAAAATGAATGAATCTACAT 58.235 30.769 0.00 0.00 0.00 2.29
2244 4569 8.246180 ACGAAGCAAAATGAATGAATCTACATT 58.754 29.630 0.00 0.00 42.19 2.71
2245 4570 8.529102 CGAAGCAAAATGAATGAATCTACATTG 58.471 33.333 0.00 0.00 40.03 2.82
2246 4571 9.362539 GAAGCAAAATGAATGAATCTACATTGT 57.637 29.630 0.00 0.00 40.03 2.71
2275 4600 8.777865 AAATGTCTATATACATCCGAATGTGG 57.222 34.615 0.00 0.00 45.72 4.17
2276 4601 6.911250 TGTCTATATACATCCGAATGTGGT 57.089 37.500 0.00 0.00 45.72 4.16
2277 4602 8.589701 ATGTCTATATACATCCGAATGTGGTA 57.410 34.615 0.00 0.00 45.72 3.25
2278 4603 8.051901 TGTCTATATACATCCGAATGTGGTAG 57.948 38.462 0.00 0.00 45.72 3.18
2279 4604 7.668469 TGTCTATATACATCCGAATGTGGTAGT 59.332 37.037 0.00 0.00 45.72 2.73
2280 4605 8.182881 GTCTATATACATCCGAATGTGGTAGTC 58.817 40.741 0.00 0.00 45.72 2.59
2281 4606 2.981859 ACATCCGAATGTGGTAGTCC 57.018 50.000 0.00 0.00 44.51 3.85
2282 4607 2.184533 ACATCCGAATGTGGTAGTCCA 58.815 47.619 0.00 0.00 44.51 4.02
2283 4608 2.771943 ACATCCGAATGTGGTAGTCCAT 59.228 45.455 0.00 0.00 44.51 3.41
2284 4609 3.199946 ACATCCGAATGTGGTAGTCCATT 59.800 43.478 0.00 0.00 44.51 3.16
2285 4610 3.260475 TCCGAATGTGGTAGTCCATTG 57.740 47.619 0.00 0.00 46.20 2.82
2286 4611 1.670811 CCGAATGTGGTAGTCCATTGC 59.329 52.381 0.00 0.00 46.20 3.56
2287 4612 2.355197 CGAATGTGGTAGTCCATTGCA 58.645 47.619 0.00 0.00 46.20 4.08
2288 4613 2.746904 CGAATGTGGTAGTCCATTGCAA 59.253 45.455 0.00 0.00 46.20 4.08
2289 4614 3.190327 CGAATGTGGTAGTCCATTGCAAA 59.810 43.478 1.71 0.00 46.20 3.68
2290 4615 4.485163 GAATGTGGTAGTCCATTGCAAAC 58.515 43.478 1.71 0.00 46.20 2.93
2291 4616 2.235016 TGTGGTAGTCCATTGCAAACC 58.765 47.619 1.71 5.95 46.20 3.27
2292 4617 2.235016 GTGGTAGTCCATTGCAAACCA 58.765 47.619 13.21 13.21 46.20 3.67
2293 4618 2.235016 TGGTAGTCCATTGCAAACCAC 58.765 47.619 13.21 5.76 39.03 4.16
2294 4619 2.235016 GGTAGTCCATTGCAAACCACA 58.765 47.619 1.71 0.00 0.00 4.17
2295 4620 2.825532 GGTAGTCCATTGCAAACCACAT 59.174 45.455 1.71 0.00 0.00 3.21
2296 4621 3.367292 GGTAGTCCATTGCAAACCACATG 60.367 47.826 1.71 0.00 0.00 3.21
2297 4622 2.596346 AGTCCATTGCAAACCACATGA 58.404 42.857 1.71 0.00 0.00 3.07
2298 4623 2.964464 AGTCCATTGCAAACCACATGAA 59.036 40.909 1.71 0.00 0.00 2.57
2299 4624 3.387374 AGTCCATTGCAAACCACATGAAA 59.613 39.130 1.71 0.00 0.00 2.69
2300 4625 3.742369 GTCCATTGCAAACCACATGAAAG 59.258 43.478 1.71 0.00 0.00 2.62
2301 4626 3.640498 TCCATTGCAAACCACATGAAAGA 59.360 39.130 1.71 0.00 0.00 2.52
2302 4627 3.742369 CCATTGCAAACCACATGAAAGAC 59.258 43.478 1.71 0.00 0.00 3.01
2303 4628 4.370049 CATTGCAAACCACATGAAAGACA 58.630 39.130 1.71 0.00 0.00 3.41
2304 4629 4.462508 TTGCAAACCACATGAAAGACAA 57.537 36.364 0.00 0.00 0.00 3.18
2305 4630 4.462508 TGCAAACCACATGAAAGACAAA 57.537 36.364 0.00 0.00 0.00 2.83
2306 4631 5.021033 TGCAAACCACATGAAAGACAAAT 57.979 34.783 0.00 0.00 0.00 2.32
2307 4632 6.154203 TGCAAACCACATGAAAGACAAATA 57.846 33.333 0.00 0.00 0.00 1.40
2308 4633 6.757237 TGCAAACCACATGAAAGACAAATAT 58.243 32.000 0.00 0.00 0.00 1.28
2309 4634 7.215789 TGCAAACCACATGAAAGACAAATATT 58.784 30.769 0.00 0.00 0.00 1.28
2310 4635 7.714377 TGCAAACCACATGAAAGACAAATATTT 59.286 29.630 0.00 0.00 0.00 1.40
2311 4636 9.202273 GCAAACCACATGAAAGACAAATATTTA 57.798 29.630 0.00 0.00 0.00 1.40
2313 4638 9.927668 AAACCACATGAAAGACAAATATTTAGG 57.072 29.630 0.00 0.00 0.00 2.69
2314 4639 8.877864 ACCACATGAAAGACAAATATTTAGGA 57.122 30.769 0.00 0.00 0.00 2.94
2315 4640 9.308000 ACCACATGAAAGACAAATATTTAGGAA 57.692 29.630 0.00 0.00 0.00 3.36
2321 4646 9.189156 TGAAAGACAAATATTTAGGAATGGAGG 57.811 33.333 0.00 0.00 0.00 4.30
2322 4647 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
2323 4648 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
2340 4898 5.191722 TGGAGGGAGTATTGCTTAATCTTGT 59.808 40.000 0.00 0.00 0.00 3.16
2342 4900 7.072454 TGGAGGGAGTATTGCTTAATCTTGTAT 59.928 37.037 0.00 0.00 0.00 2.29
2376 4934 5.018809 ACTATTCTTTGGGACATGTTGCAT 58.981 37.500 0.00 0.00 39.30 3.96
2448 5035 7.454380 CCTCTTACCTCCTCTTTCATATGAGAT 59.546 40.741 5.39 0.00 32.44 2.75
2477 5064 7.704727 AGAGTACACTATAATAGATCTGGGCT 58.295 38.462 5.18 0.00 0.00 5.19
2487 5074 3.010200 AGATCTGGGCTGTTGATTTCC 57.990 47.619 0.00 0.00 0.00 3.13
2492 5079 4.735369 TCTGGGCTGTTGATTTCCTTAAA 58.265 39.130 0.00 0.00 0.00 1.52
2526 5113 6.152492 CCGAGTAACTCTTACCTTCTTACCTT 59.848 42.308 0.00 0.00 36.81 3.50
2568 5155 6.127451 GGTAAGAGGGACCATGTTAAAATTGG 60.127 42.308 0.00 0.00 36.91 3.16
2576 5163 6.873605 GGACCATGTTAAAATTGGAAAAGAGG 59.126 38.462 6.59 0.00 34.52 3.69
2578 5166 8.206126 ACCATGTTAAAATTGGAAAAGAGGAT 57.794 30.769 6.59 0.00 34.52 3.24
2579 5167 9.320295 ACCATGTTAAAATTGGAAAAGAGGATA 57.680 29.630 6.59 0.00 34.52 2.59
2599 5189 9.408069 GAGGATATAATAGTGACCGTGTTAAAG 57.592 37.037 0.00 0.00 0.00 1.85
2601 5191 5.961395 ATAATAGTGACCGTGTTAAAGCG 57.039 39.130 0.00 0.00 0.00 4.68
2602 5192 3.581024 ATAGTGACCGTGTTAAAGCGA 57.419 42.857 0.00 0.00 0.00 4.93
2608 5198 2.334838 ACCGTGTTAAAGCGACTCATC 58.665 47.619 0.00 0.00 0.00 2.92
2797 5635 2.373836 TGTAGCTTTTGGTCTTGCCCTA 59.626 45.455 0.00 0.00 36.04 3.53
2890 5748 4.082026 GCCTTATATTGGGCTATTTGGCTG 60.082 45.833 10.28 0.00 44.48 4.85
2894 5754 2.603075 TTGGGCTATTTGGCTGACTT 57.397 45.000 0.00 0.00 41.48 3.01
2950 5810 0.686441 TGTAGGTGATCCTCGGTGGG 60.686 60.000 0.00 0.00 43.94 4.61
2992 5858 5.381174 CATTGTTGCAGAAAATGAGGAGA 57.619 39.130 10.84 0.00 33.96 3.71
2993 5859 5.775686 CATTGTTGCAGAAAATGAGGAGAA 58.224 37.500 10.84 0.00 33.96 2.87
2994 5860 4.836125 TGTTGCAGAAAATGAGGAGAAC 57.164 40.909 0.00 0.00 0.00 3.01
2999 5865 4.036734 TGCAGAAAATGAGGAGAACAACAC 59.963 41.667 0.00 0.00 0.00 3.32
3069 5938 3.589735 TCTTAGCAAACCTTGGGTGGATA 59.410 43.478 0.00 0.00 35.34 2.59
3074 5943 4.137543 GCAAACCTTGGGTGGATATCTAG 58.862 47.826 2.05 0.00 35.34 2.43
3078 5947 4.753186 ACCTTGGGTGGATATCTAGTAGG 58.247 47.826 2.05 3.87 32.98 3.18
3100 5969 5.707764 AGGAGAATTTGTGCCTAGTTTTCTC 59.292 40.000 0.00 0.00 37.79 2.87
3102 5971 6.879458 GGAGAATTTGTGCCTAGTTTTCTCTA 59.121 38.462 8.99 0.00 38.30 2.43
3107 5976 5.738619 TGTGCCTAGTTTTCTCTACATGA 57.261 39.130 0.00 0.00 0.00 3.07
3119 5988 9.713740 GTTTTCTCTACATGATCATGAACAATC 57.286 33.333 36.37 16.56 41.20 2.67
3187 6056 4.062991 GGCTGGAACTATGTAATAACGGG 58.937 47.826 0.00 0.00 0.00 5.28
3188 6057 3.497262 GCTGGAACTATGTAATAACGGGC 59.503 47.826 0.00 0.00 0.00 6.13
3260 6129 5.529581 TTGAAGGTGAGAAAATTGGGAAC 57.470 39.130 0.00 0.00 0.00 3.62
3274 6143 2.576832 GGAACGGGGGAGAACGACA 61.577 63.158 0.00 0.00 0.00 4.35
3289 6158 5.715070 AGAACGACAAACTCTAGGATTCAG 58.285 41.667 0.00 0.00 0.00 3.02
3290 6159 4.457834 ACGACAAACTCTAGGATTCAGG 57.542 45.455 0.00 0.00 0.00 3.86
3294 6163 4.837972 ACAAACTCTAGGATTCAGGCTTC 58.162 43.478 0.00 0.00 0.00 3.86
3327 6196 2.158842 GCTCTAGATGGAGGCACATTGT 60.159 50.000 0.00 0.00 34.21 2.71
3493 6364 0.529378 CAAGTGCCCAATGAAGCCTC 59.471 55.000 0.00 0.00 0.00 4.70
3494 6365 0.407139 AAGTGCCCAATGAAGCCTCT 59.593 50.000 0.00 0.00 0.00 3.69
3515 6418 5.710646 TCTCTGATGTAGGCTCCTCTAAAT 58.289 41.667 0.00 0.00 0.00 1.40
3517 6420 7.298374 TCTCTGATGTAGGCTCCTCTAAATAA 58.702 38.462 0.00 0.00 0.00 1.40
3528 6431 5.112129 TCCTCTAAATAAGGGGCTTTCAC 57.888 43.478 0.00 0.00 46.85 3.18
3546 6449 7.862873 GGCTTTCACATATTTAAAGGATAGTGC 59.137 37.037 0.00 0.00 32.14 4.40
3547 6450 7.587757 GCTTTCACATATTTAAAGGATAGTGCG 59.412 37.037 0.00 0.00 32.14 5.34
3558 6461 1.066430 GGATAGTGCGTGGAACAAGGA 60.066 52.381 0.00 0.00 44.16 3.36
3570 6473 4.640647 GTGGAACAAGGATAAAGGATGGAC 59.359 45.833 0.00 0.00 44.16 4.02
3619 6522 7.203218 GCAAAGAGGTTTTGATCAAGTTAGTT 58.797 34.615 8.41 0.00 0.00 2.24
3626 6529 5.362556 TTTGATCAAGTTAGTTGCTCAGC 57.637 39.130 8.41 0.00 41.23 4.26
3700 6603 3.871594 AGCACCTGAATAAACTCATACGC 59.128 43.478 0.00 0.00 0.00 4.42
3706 6609 6.183360 ACCTGAATAAACTCATACGCCAATTG 60.183 38.462 0.00 0.00 0.00 2.32
3714 6617 2.092699 TCATACGCCAATTGTGATGGGA 60.093 45.455 4.43 0.00 38.44 4.37
3720 6623 2.093341 GCCAATTGTGATGGGAAAGCAT 60.093 45.455 4.43 0.00 38.44 3.79
3801 6704 0.106015 GGTGGATTGGGATTCAGGGG 60.106 60.000 0.00 0.00 0.00 4.79
3827 6730 3.261643 TGAGCTCTTCAACCTAGCATTGA 59.738 43.478 16.19 4.08 38.75 2.57
3988 6901 1.740025 GATGTGCTACACCAAGGCTTC 59.260 52.381 0.00 0.00 32.73 3.86
3996 6909 1.004745 ACACCAAGGCTTCATCCGAAT 59.995 47.619 0.00 0.00 0.00 3.34
4006 6919 3.496870 GCTTCATCCGAATAGTTGGGGAT 60.497 47.826 0.00 0.00 39.83 3.85
4027 6940 4.695217 TGGTTCTTCCATCGTTATTTGC 57.305 40.909 0.00 0.00 41.93 3.68
4038 6951 4.177165 TCGTTATTTGCTCGGACAACTA 57.823 40.909 0.00 0.00 0.00 2.24
4067 6980 4.543590 AGAGATGAAAACATGAGACCGT 57.456 40.909 0.00 0.00 0.00 4.83
4087 7000 3.276846 GTGTGCCTCGCAACGGTT 61.277 61.111 0.00 0.00 41.47 4.44
4104 7017 2.154747 TTCGCCCCACCCTGGTTAA 61.155 57.895 0.00 0.00 35.17 2.01
4134 7047 2.496899 AATCATGTTGAGGCCTCGTT 57.503 45.000 27.43 9.38 0.00 3.85
4147 7060 1.202545 GCCTCGTTGAATAGGGAGGTC 60.203 57.143 7.67 0.00 46.20 3.85
4239 7153 3.303049 AGGATTTCTGGGCATGGAATTC 58.697 45.455 0.00 0.00 0.00 2.17
4243 7157 0.107214 TCTGGGCATGGAATTCCGAC 60.107 55.000 19.57 8.32 39.43 4.79
4248 7162 2.301346 GGCATGGAATTCCGACAAGAT 58.699 47.619 19.57 3.50 39.43 2.40
4342 7258 0.179111 CGTGCGAGCTCCTCCAATTA 60.179 55.000 8.47 0.00 0.00 1.40
4362 7278 1.274703 TGGAGCCAAGGAGGATGGAC 61.275 60.000 0.00 0.00 40.56 4.02
4368 7284 1.195115 CAAGGAGGATGGACGGAAGA 58.805 55.000 0.00 0.00 0.00 2.87
4375 7291 2.032620 GGATGGACGGAAGAAGCTCTA 58.967 52.381 0.00 0.00 0.00 2.43
4389 7305 1.316706 GCTCTAGCAGGTGGACGTCT 61.317 60.000 16.46 0.00 41.59 4.18
4407 7324 3.614616 CGTCTGAGGAAAGCTACACAATC 59.385 47.826 0.00 0.00 0.00 2.67
4427 7344 1.138661 CTTTTGTGGAGGCTGGCAAAA 59.861 47.619 15.10 15.10 38.14 2.44
4474 7391 2.738846 GGCATCATCGACATATGTCACC 59.261 50.000 30.15 16.99 44.99 4.02
4479 7396 4.631131 TCATCGACATATGTCACCAATCC 58.369 43.478 30.15 6.74 44.99 3.01
4484 7401 4.621460 CGACATATGTCACCAATCCGATAC 59.379 45.833 30.15 4.34 44.99 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.035469 ACATCCATTGCGGCCACA 59.965 55.556 2.24 0.00 33.14 4.17
36 37 1.061411 CACAGCGACATCCATTGCG 59.939 57.895 0.00 0.00 33.84 4.85
47 48 3.874141 GAGCGTGACGACACAGCGA 62.874 63.158 17.71 0.00 46.20 4.93
48 49 3.461982 GAGCGTGACGACACAGCG 61.462 66.667 17.71 5.51 46.20 5.18
98 100 3.037249 GCACGGTTACGCCAACGA 61.037 61.111 0.00 0.00 46.04 3.85
160 165 4.341487 TCTCATGGTCTACTTTTCCTCGA 58.659 43.478 0.00 0.00 0.00 4.04
193 198 1.626321 TGGCCATCGTAGGACAAAAGA 59.374 47.619 0.00 0.00 45.86 2.52
198 203 1.610967 TGGTGGCCATCGTAGGACA 60.611 57.895 9.72 0.15 46.94 4.02
203 208 1.003112 GGTTGTGGTGGCCATCGTA 60.003 57.895 9.72 0.00 35.28 3.43
226 231 2.529454 ATCGGTTGTGTATGCCGGCA 62.529 55.000 34.80 34.80 44.97 5.69
244 249 1.675641 GCTGAACCGGGCAAGACAT 60.676 57.895 6.32 0.00 0.00 3.06
303 308 0.912006 GAGGGGAAGAGTGGCTCCTT 60.912 60.000 0.00 0.00 0.00 3.36
305 310 2.371259 GGAGGGGAAGAGTGGCTCC 61.371 68.421 0.00 0.00 0.00 4.70
326 331 1.675310 CGGAGTGGCCATGCTTCAA 60.675 57.895 9.72 0.00 35.94 2.69
353 358 0.107703 CTTCCTTATGTCCGCCTGCA 60.108 55.000 0.00 0.00 0.00 4.41
358 363 3.997021 CACCATATCTTCCTTATGTCCGC 59.003 47.826 0.00 0.00 0.00 5.54
437 442 4.624024 CGGACATACTTCAACTAAAAGCGA 59.376 41.667 0.00 0.00 0.00 4.93
497 511 4.511082 CCGGACAAAATTCATGCAAAAACT 59.489 37.500 0.00 0.00 0.00 2.66
515 529 2.190981 CGCTGTATGAACTAACCGGAC 58.809 52.381 9.46 0.00 0.00 4.79
529 543 3.729966 TGTGTACATTTCAACCGCTGTA 58.270 40.909 0.00 0.00 0.00 2.74
534 548 5.617609 CACTACATGTGTACATTTCAACCG 58.382 41.667 9.11 0.00 41.53 4.44
548 562 1.678728 CGGCCATCCAACACTACATGT 60.679 52.381 2.24 2.69 46.42 3.21
551 565 1.298340 CCGGCCATCCAACACTACA 59.702 57.895 2.24 0.00 0.00 2.74
553 567 2.252072 GAGCCGGCCATCCAACACTA 62.252 60.000 26.15 0.00 0.00 2.74
584 598 1.423395 CGGATGAAATCTAGCGGCTC 58.577 55.000 5.39 0.00 44.71 4.70
585 599 0.034059 CCGGATGAAATCTAGCGGCT 59.966 55.000 7.98 7.98 44.71 5.52
586 600 2.533318 CCGGATGAAATCTAGCGGC 58.467 57.895 0.00 0.00 44.71 6.53
587 601 0.951040 GGCCGGATGAAATCTAGCGG 60.951 60.000 5.05 0.00 44.91 5.52
588 602 0.249868 TGGCCGGATGAAATCTAGCG 60.250 55.000 5.05 0.00 44.71 4.26
589 603 1.202698 ACTGGCCGGATGAAATCTAGC 60.203 52.381 21.41 0.00 44.71 3.42
590 604 2.874701 CAACTGGCCGGATGAAATCTAG 59.125 50.000 21.41 0.00 44.71 2.43
591 605 2.917933 CAACTGGCCGGATGAAATCTA 58.082 47.619 21.41 0.00 44.71 1.98
592 606 1.755179 CAACTGGCCGGATGAAATCT 58.245 50.000 21.41 0.00 44.71 2.40
593 607 0.101219 GCAACTGGCCGGATGAAATC 59.899 55.000 25.02 3.79 38.69 2.17
594 608 0.323725 AGCAACTGGCCGGATGAAAT 60.324 50.000 25.02 7.36 46.50 2.17
595 609 1.074775 AGCAACTGGCCGGATGAAA 59.925 52.632 25.02 0.00 46.50 2.69
596 610 1.675310 CAGCAACTGGCCGGATGAA 60.675 57.895 25.02 0.00 46.50 2.57
597 611 2.046023 CAGCAACTGGCCGGATGA 60.046 61.111 25.02 0.00 46.50 2.92
598 612 3.818787 GCAGCAACTGGCCGGATG 61.819 66.667 21.41 19.09 46.50 3.51
599 613 3.650298 ATGCAGCAACTGGCCGGAT 62.650 57.895 21.41 2.40 46.50 4.18
600 614 4.349503 ATGCAGCAACTGGCCGGA 62.350 61.111 21.41 0.00 46.50 5.14
601 615 4.124351 CATGCAGCAACTGGCCGG 62.124 66.667 11.02 11.02 46.50 6.13
602 616 1.940883 ATTCATGCAGCAACTGGCCG 61.941 55.000 0.00 0.00 46.50 6.13
603 617 0.248289 AATTCATGCAGCAACTGGCC 59.752 50.000 0.00 0.00 46.50 5.36
604 618 2.088950 AAATTCATGCAGCAACTGGC 57.911 45.000 0.00 0.00 45.30 4.85
605 619 3.395639 ACAAAATTCATGCAGCAACTGG 58.604 40.909 0.00 0.00 31.21 4.00
606 620 4.149922 CAGACAAAATTCATGCAGCAACTG 59.850 41.667 0.00 0.00 34.12 3.16
607 621 4.038282 TCAGACAAAATTCATGCAGCAACT 59.962 37.500 0.00 0.00 0.00 3.16
608 622 4.149396 GTCAGACAAAATTCATGCAGCAAC 59.851 41.667 0.00 0.00 0.00 4.17
609 623 4.038282 AGTCAGACAAAATTCATGCAGCAA 59.962 37.500 0.00 0.00 0.00 3.91
610 624 3.570975 AGTCAGACAAAATTCATGCAGCA 59.429 39.130 0.00 0.00 0.00 4.41
611 625 4.170292 AGTCAGACAAAATTCATGCAGC 57.830 40.909 2.66 0.00 0.00 5.25
612 626 6.370994 AGACTAGTCAGACAAAATTCATGCAG 59.629 38.462 24.44 0.00 0.00 4.41
613 627 6.233434 AGACTAGTCAGACAAAATTCATGCA 58.767 36.000 24.44 0.00 0.00 3.96
614 628 6.734104 AGACTAGTCAGACAAAATTCATGC 57.266 37.500 24.44 0.00 0.00 4.06
621 635 8.242053 CGGATAGTAAAGACTAGTCAGACAAAA 58.758 37.037 24.44 9.06 41.50 2.44
622 636 7.627939 GCGGATAGTAAAGACTAGTCAGACAAA 60.628 40.741 24.44 11.12 41.50 2.83
623 637 6.183360 GCGGATAGTAAAGACTAGTCAGACAA 60.183 42.308 24.44 6.04 41.50 3.18
624 638 5.296283 GCGGATAGTAAAGACTAGTCAGACA 59.704 44.000 24.44 9.92 41.50 3.41
625 639 5.558653 CGCGGATAGTAAAGACTAGTCAGAC 60.559 48.000 24.44 17.31 41.50 3.51
626 640 4.510711 CGCGGATAGTAAAGACTAGTCAGA 59.489 45.833 24.44 6.48 41.50 3.27
637 651 2.611971 GCATCCATCCGCGGATAGTAAA 60.612 50.000 38.48 21.91 44.28 2.01
638 652 1.067142 GCATCCATCCGCGGATAGTAA 60.067 52.381 38.48 23.61 44.28 2.24
639 653 0.530744 GCATCCATCCGCGGATAGTA 59.469 55.000 38.48 26.05 44.28 1.82
640 654 1.293498 GCATCCATCCGCGGATAGT 59.707 57.895 38.48 24.03 44.28 2.12
641 655 1.448540 GGCATCCATCCGCGGATAG 60.449 63.158 38.48 31.77 44.28 2.08
642 656 1.763546 TTGGCATCCATCCGCGGATA 61.764 55.000 38.48 25.76 44.28 2.59
644 658 2.828480 TTTTGGCATCCATCCGCGGA 62.828 55.000 33.12 33.12 40.07 5.54
645 659 2.413963 TTTTGGCATCCATCCGCGG 61.414 57.895 22.12 22.12 31.53 6.46
646 660 1.226660 GTTTTGGCATCCATCCGCG 60.227 57.895 0.00 0.00 31.53 6.46
647 661 0.246086 TTGTTTTGGCATCCATCCGC 59.754 50.000 0.00 0.00 31.53 5.54
648 662 2.739885 TTTGTTTTGGCATCCATCCG 57.260 45.000 0.00 0.00 31.53 4.18
649 663 4.379708 GCAAATTTGTTTTGGCATCCATCC 60.380 41.667 19.03 0.00 44.10 3.51
650 664 4.669708 CGCAAATTTGTTTTGGCATCCATC 60.670 41.667 19.03 0.00 44.10 3.51
651 665 3.188873 CGCAAATTTGTTTTGGCATCCAT 59.811 39.130 19.03 0.00 44.10 3.41
653 667 2.095819 CCGCAAATTTGTTTTGGCATCC 60.096 45.455 19.03 0.00 44.10 3.51
654 668 2.095819 CCCGCAAATTTGTTTTGGCATC 60.096 45.455 19.03 0.00 44.10 3.91
655 669 1.878734 CCCGCAAATTTGTTTTGGCAT 59.121 42.857 19.03 0.00 44.10 4.40
656 670 1.303309 CCCGCAAATTTGTTTTGGCA 58.697 45.000 19.03 0.00 44.10 4.92
657 671 1.304254 ACCCGCAAATTTGTTTTGGC 58.696 45.000 19.03 3.11 44.10 4.52
658 672 4.332819 TGTTAACCCGCAAATTTGTTTTGG 59.667 37.500 19.03 15.34 44.10 3.28
659 673 5.470845 TGTTAACCCGCAAATTTGTTTTG 57.529 34.783 19.03 8.43 46.22 2.44
660 674 6.458888 CCAATGTTAACCCGCAAATTTGTTTT 60.459 34.615 19.03 9.68 0.00 2.43
661 675 5.008118 CCAATGTTAACCCGCAAATTTGTTT 59.992 36.000 19.03 9.98 0.00 2.83
662 676 4.513318 CCAATGTTAACCCGCAAATTTGTT 59.487 37.500 19.03 8.29 0.00 2.83
663 677 4.061596 CCAATGTTAACCCGCAAATTTGT 58.938 39.130 19.03 1.95 0.00 2.83
664 678 4.310769 TCCAATGTTAACCCGCAAATTTG 58.689 39.130 14.03 14.03 0.00 2.32
665 679 4.282195 TCTCCAATGTTAACCCGCAAATTT 59.718 37.500 2.48 0.00 0.00 1.82
666 680 3.829601 TCTCCAATGTTAACCCGCAAATT 59.170 39.130 2.48 0.00 0.00 1.82
667 681 3.426615 TCTCCAATGTTAACCCGCAAAT 58.573 40.909 2.48 0.00 0.00 2.32
668 682 2.865079 TCTCCAATGTTAACCCGCAAA 58.135 42.857 2.48 0.00 0.00 3.68
669 683 2.570415 TCTCCAATGTTAACCCGCAA 57.430 45.000 2.48 0.00 0.00 4.85
670 684 2.364632 CATCTCCAATGTTAACCCGCA 58.635 47.619 2.48 0.00 0.00 5.69
671 685 1.065551 GCATCTCCAATGTTAACCCGC 59.934 52.381 2.48 0.00 0.00 6.13
672 686 1.676006 GGCATCTCCAATGTTAACCCG 59.324 52.381 2.48 0.00 34.01 5.28
673 687 2.733956 TGGCATCTCCAATGTTAACCC 58.266 47.619 2.48 0.00 43.21 4.11
683 697 0.907486 CCTGACTCTTGGCATCTCCA 59.093 55.000 0.00 0.00 44.85 3.86
684 698 0.908198 ACCTGACTCTTGGCATCTCC 59.092 55.000 0.00 0.00 0.00 3.71
685 699 2.482839 GCTACCTGACTCTTGGCATCTC 60.483 54.545 0.00 0.00 0.00 2.75
686 700 1.484240 GCTACCTGACTCTTGGCATCT 59.516 52.381 0.00 0.00 0.00 2.90
687 701 1.804372 CGCTACCTGACTCTTGGCATC 60.804 57.143 0.00 0.00 0.00 3.91
688 702 0.176680 CGCTACCTGACTCTTGGCAT 59.823 55.000 0.00 0.00 0.00 4.40
689 703 1.591703 CGCTACCTGACTCTTGGCA 59.408 57.895 0.00 0.00 0.00 4.92
690 704 1.811679 GCGCTACCTGACTCTTGGC 60.812 63.158 0.00 0.00 0.00 4.52
691 705 0.037326 TTGCGCTACCTGACTCTTGG 60.037 55.000 9.73 0.00 0.00 3.61
692 706 1.795768 TTTGCGCTACCTGACTCTTG 58.204 50.000 9.73 0.00 0.00 3.02
699 713 1.745087 ACCAATGATTTGCGCTACCTG 59.255 47.619 9.73 0.00 0.00 4.00
700 714 2.128771 ACCAATGATTTGCGCTACCT 57.871 45.000 9.73 0.00 0.00 3.08
706 720 2.193306 GGCACTACCAATGATTTGCG 57.807 50.000 0.00 0.00 38.86 4.85
762 781 3.938963 GGAATCTGAAGATACGTTGGCAA 59.061 43.478 0.00 0.00 33.73 4.52
823 850 2.673368 CGGCTCTCAAGTAACATGTTCC 59.327 50.000 15.85 3.12 0.00 3.62
844 872 6.606768 GCTAGCTGCAAAATATTGGTAGATC 58.393 40.000 7.70 0.00 42.31 2.75
866 898 1.550327 TCGAGGAGTCAACATCTGCT 58.450 50.000 0.00 0.00 36.37 4.24
1013 1076 3.193056 GCCGGAGAAAGACAAGTACTACT 59.807 47.826 5.05 0.00 0.00 2.57
1014 1077 3.509740 GCCGGAGAAAGACAAGTACTAC 58.490 50.000 5.05 0.00 0.00 2.73
1015 1078 2.494870 GGCCGGAGAAAGACAAGTACTA 59.505 50.000 5.05 0.00 0.00 1.82
1049 1112 2.121538 CGAGCAGGATGAGGACCGA 61.122 63.158 0.00 0.00 39.69 4.69
1151 1214 3.545481 CATGACGACGCCGCACTC 61.545 66.667 0.00 0.00 39.95 3.51
1173 1437 2.189521 CCATGTCGTAGGTGCCCC 59.810 66.667 0.00 0.00 0.00 5.80
1241 2311 2.035626 CTTGGCGGGAATGGTGGT 59.964 61.111 0.00 0.00 0.00 4.16
1284 2354 3.243670 GCGGTAGGAGTCCCTGTAATAAC 60.244 52.174 5.25 0.00 44.15 1.89
1324 2394 2.806198 TCGACGTAAAAGCGCCCG 60.806 61.111 2.29 1.14 34.88 6.13
1325 2395 2.774126 GTCGACGTAAAAGCGCCC 59.226 61.111 2.29 0.00 34.88 6.13
1326 2396 2.082366 TCGTCGACGTAAAAGCGCC 61.082 57.895 34.40 0.00 40.80 6.53
1327 2397 1.054785 GTCGTCGACGTAAAAGCGC 59.945 57.895 34.40 0.00 40.80 5.92
1597 2667 4.654262 AGAAGGAGTTTACTGTTGAGGTCA 59.346 41.667 0.00 0.00 0.00 4.02
1602 2672 6.071984 AGAGAGAGAAGGAGTTTACTGTTGA 58.928 40.000 0.00 0.00 0.00 3.18
1605 2675 5.887754 AGAGAGAGAGAAGGAGTTTACTGT 58.112 41.667 0.00 0.00 0.00 3.55
1631 2701 7.691213 TGTACGAGAAAGATAGGGATAGAGAT 58.309 38.462 0.00 0.00 0.00 2.75
1634 2718 8.604184 AGTATGTACGAGAAAGATAGGGATAGA 58.396 37.037 0.00 0.00 0.00 1.98
1637 2721 8.604184 TCTAGTATGTACGAGAAAGATAGGGAT 58.396 37.037 0.00 0.00 35.48 3.85
1638 2722 7.971201 TCTAGTATGTACGAGAAAGATAGGGA 58.029 38.462 0.00 0.00 35.48 4.20
1639 2723 8.795842 ATCTAGTATGTACGAGAAAGATAGGG 57.204 38.462 7.01 0.00 40.45 3.53
1640 2724 9.661563 AGATCTAGTATGTACGAGAAAGATAGG 57.338 37.037 7.01 0.00 40.45 2.57
1647 2731 9.828039 TTGTTCTAGATCTAGTATGTACGAGAA 57.172 33.333 25.54 10.64 40.45 2.87
1689 2774 5.445142 GCTCTCACAGTGATGTACGAATTTG 60.445 44.000 2.97 0.00 0.00 2.32
1722 2807 3.305110 CCAAAACTCGGTTGTAATGCAC 58.695 45.455 0.00 0.00 0.00 4.57
1724 2809 2.287909 TGCCAAAACTCGGTTGTAATGC 60.288 45.455 0.00 0.00 0.00 3.56
1797 2971 5.733226 TTGCGTCACATATCCATACTTTG 57.267 39.130 0.00 0.00 0.00 2.77
1832 3009 6.311445 CCGTGATGTATATCAAATAGTGAGCC 59.689 42.308 3.45 0.00 44.49 4.70
1834 3011 6.311445 GCCCGTGATGTATATCAAATAGTGAG 59.689 42.308 3.45 0.00 44.49 3.51
1856 3033 7.676947 TGGTTCTAGAATACAATATAGTGCCC 58.323 38.462 8.75 0.46 0.00 5.36
1858 3035 9.372369 GGATGGTTCTAGAATACAATATAGTGC 57.628 37.037 8.75 0.00 0.00 4.40
1866 3043 6.667848 TGACAGAGGATGGTTCTAGAATACAA 59.332 38.462 8.75 0.00 0.00 2.41
1869 3046 6.322456 CAGTGACAGAGGATGGTTCTAGAATA 59.678 42.308 8.75 1.60 0.00 1.75
1871 3048 4.464244 CAGTGACAGAGGATGGTTCTAGAA 59.536 45.833 0.00 0.00 0.00 2.10
1874 3051 2.497675 GCAGTGACAGAGGATGGTTCTA 59.502 50.000 0.00 0.00 0.00 2.10
1878 3137 0.901124 GAGCAGTGACAGAGGATGGT 59.099 55.000 0.00 0.00 0.00 3.55
1881 3140 2.031120 GCTAGAGCAGTGACAGAGGAT 58.969 52.381 0.00 0.00 41.59 3.24
1900 3159 1.007387 CCGGGTGAAAAGCAACTGC 60.007 57.895 0.00 0.00 39.36 4.40
1978 3243 4.655963 TGAGGCATTTGAACTTCTTAGCT 58.344 39.130 0.00 0.00 0.00 3.32
1996 3261 8.984891 TTAACTTGACAATTTTATGCATGAGG 57.015 30.769 10.16 0.00 0.00 3.86
2050 3315 8.731275 TTTGTCTTCAACTCTTCATACAGAAA 57.269 30.769 0.00 0.00 32.60 2.52
2055 3320 9.862371 TCTCTATTTGTCTTCAACTCTTCATAC 57.138 33.333 0.00 0.00 32.93 2.39
2109 3374 2.622436 GCGTCAGCCAGAAAAGTCTAT 58.378 47.619 0.00 0.00 37.42 1.98
2120 3385 3.755628 GAGGGTACGCGTCAGCCA 61.756 66.667 26.93 7.08 41.18 4.75
2123 3388 1.404391 ACTAATGAGGGTACGCGTCAG 59.596 52.381 18.63 2.71 0.00 3.51
2129 3394 2.494471 TCCACACACTAATGAGGGTACG 59.506 50.000 0.00 0.00 37.13 3.67
2132 3397 2.621070 ACTCCACACACTAATGAGGGT 58.379 47.619 0.00 0.00 41.29 4.34
2162 4487 9.886132 GACAAATATTTAGGAACAGAGGAAGTA 57.114 33.333 0.00 0.00 0.00 2.24
2163 4488 8.606830 AGACAAATATTTAGGAACAGAGGAAGT 58.393 33.333 0.00 0.00 0.00 3.01
2164 4489 9.454859 AAGACAAATATTTAGGAACAGAGGAAG 57.545 33.333 0.00 0.00 0.00 3.46
2165 4490 9.807921 AAAGACAAATATTTAGGAACAGAGGAA 57.192 29.630 0.00 0.00 0.00 3.36
2166 4491 9.449719 GAAAGACAAATATTTAGGAACAGAGGA 57.550 33.333 0.00 0.00 0.00 3.71
2167 4492 9.454859 AGAAAGACAAATATTTAGGAACAGAGG 57.545 33.333 0.00 0.00 0.00 3.69
2194 4519 9.825972 CGTATGTAGTCATTTGTTGAAATCTTT 57.174 29.630 0.00 0.00 35.70 2.52
2195 4520 9.214957 TCGTATGTAGTCATTTGTTGAAATCTT 57.785 29.630 0.00 0.00 35.70 2.40
2196 4521 8.771920 TCGTATGTAGTCATTTGTTGAAATCT 57.228 30.769 0.00 0.00 35.70 2.40
2197 4522 9.478019 CTTCGTATGTAGTCATTTGTTGAAATC 57.522 33.333 0.00 0.00 35.70 2.17
2198 4523 7.962918 GCTTCGTATGTAGTCATTTGTTGAAAT 59.037 33.333 0.00 0.00 35.70 2.17
2199 4524 7.041712 TGCTTCGTATGTAGTCATTTGTTGAAA 60.042 33.333 0.00 0.00 35.70 2.69
2200 4525 6.425417 TGCTTCGTATGTAGTCATTTGTTGAA 59.575 34.615 0.00 0.00 35.70 2.69
2201 4526 5.929415 TGCTTCGTATGTAGTCATTTGTTGA 59.071 36.000 0.00 0.00 35.70 3.18
2202 4527 6.164408 TGCTTCGTATGTAGTCATTTGTTG 57.836 37.500 0.00 0.00 35.70 3.33
2203 4528 6.795098 TTGCTTCGTATGTAGTCATTTGTT 57.205 33.333 0.00 0.00 35.70 2.83
2204 4529 6.795098 TTTGCTTCGTATGTAGTCATTTGT 57.205 33.333 0.00 0.00 35.70 2.83
2205 4530 7.962373 TCATTTTGCTTCGTATGTAGTCATTTG 59.038 33.333 0.00 0.00 35.70 2.32
2206 4531 8.039603 TCATTTTGCTTCGTATGTAGTCATTT 57.960 30.769 0.00 0.00 35.70 2.32
2207 4532 7.609760 TCATTTTGCTTCGTATGTAGTCATT 57.390 32.000 0.00 0.00 35.70 2.57
2208 4533 7.609760 TTCATTTTGCTTCGTATGTAGTCAT 57.390 32.000 0.00 0.00 38.00 3.06
2209 4534 7.333174 TCATTCATTTTGCTTCGTATGTAGTCA 59.667 33.333 0.00 0.00 0.00 3.41
2210 4535 7.684670 TCATTCATTTTGCTTCGTATGTAGTC 58.315 34.615 0.00 0.00 0.00 2.59
2211 4536 7.609760 TCATTCATTTTGCTTCGTATGTAGT 57.390 32.000 0.00 0.00 0.00 2.73
2212 4537 9.162793 GATTCATTCATTTTGCTTCGTATGTAG 57.837 33.333 0.00 0.00 0.00 2.74
2213 4538 8.892723 AGATTCATTCATTTTGCTTCGTATGTA 58.107 29.630 0.00 0.00 0.00 2.29
2214 4539 7.765307 AGATTCATTCATTTTGCTTCGTATGT 58.235 30.769 0.00 0.00 0.00 2.29
2215 4540 9.162793 GTAGATTCATTCATTTTGCTTCGTATG 57.837 33.333 0.00 0.00 0.00 2.39
2216 4541 8.892723 TGTAGATTCATTCATTTTGCTTCGTAT 58.107 29.630 0.00 0.00 0.00 3.06
2217 4542 8.262715 TGTAGATTCATTCATTTTGCTTCGTA 57.737 30.769 0.00 0.00 0.00 3.43
2218 4543 7.144722 TGTAGATTCATTCATTTTGCTTCGT 57.855 32.000 0.00 0.00 0.00 3.85
2219 4544 8.529102 CAATGTAGATTCATTCATTTTGCTTCG 58.471 33.333 0.00 0.00 36.10 3.79
2220 4545 9.362539 ACAATGTAGATTCATTCATTTTGCTTC 57.637 29.630 0.00 0.00 36.10 3.86
2249 4574 9.219603 CCACATTCGGATGTATATAGACATTTT 57.780 33.333 9.54 0.00 44.55 1.82
2250 4575 8.375506 ACCACATTCGGATGTATATAGACATTT 58.624 33.333 9.54 0.00 44.55 2.32
2251 4576 7.907389 ACCACATTCGGATGTATATAGACATT 58.093 34.615 9.54 0.00 44.55 2.71
2252 4577 7.482169 ACCACATTCGGATGTATATAGACAT 57.518 36.000 12.70 12.70 44.55 3.06
2253 4578 6.911250 ACCACATTCGGATGTATATAGACA 57.089 37.500 9.54 2.07 44.55 3.41
2254 4579 8.053026 ACTACCACATTCGGATGTATATAGAC 57.947 38.462 20.24 0.00 44.55 2.59
2255 4580 7.338703 GGACTACCACATTCGGATGTATATAGA 59.661 40.741 20.24 2.13 44.55 1.98
2256 4581 7.122204 TGGACTACCACATTCGGATGTATATAG 59.878 40.741 9.54 13.12 44.55 1.31
2257 4582 6.949463 TGGACTACCACATTCGGATGTATATA 59.051 38.462 9.54 1.59 44.55 0.86
2258 4583 5.778241 TGGACTACCACATTCGGATGTATAT 59.222 40.000 9.54 0.35 44.55 0.86
2259 4584 5.141910 TGGACTACCACATTCGGATGTATA 58.858 41.667 9.54 4.49 44.55 1.47
2260 4585 3.964688 TGGACTACCACATTCGGATGTAT 59.035 43.478 9.54 3.42 44.55 2.29
2261 4586 3.367321 TGGACTACCACATTCGGATGTA 58.633 45.455 9.54 0.00 44.55 2.29
2263 4588 2.979814 TGGACTACCACATTCGGATG 57.020 50.000 0.88 0.88 41.77 3.51
2274 4599 2.235016 TGTGGTTTGCAATGGACTACC 58.765 47.619 12.11 10.42 0.00 3.18
2275 4600 3.505680 TCATGTGGTTTGCAATGGACTAC 59.494 43.478 0.00 4.55 0.00 2.73
2276 4601 3.760738 TCATGTGGTTTGCAATGGACTA 58.239 40.909 0.00 0.00 0.00 2.59
2277 4602 2.596346 TCATGTGGTTTGCAATGGACT 58.404 42.857 0.00 0.00 0.00 3.85
2278 4603 3.383620 TTCATGTGGTTTGCAATGGAC 57.616 42.857 0.00 0.00 0.00 4.02
2279 4604 3.640498 TCTTTCATGTGGTTTGCAATGGA 59.360 39.130 0.00 0.00 0.00 3.41
2280 4605 3.742369 GTCTTTCATGTGGTTTGCAATGG 59.258 43.478 0.00 0.00 0.00 3.16
2281 4606 4.370049 TGTCTTTCATGTGGTTTGCAATG 58.630 39.130 0.00 0.00 0.00 2.82
2282 4607 4.669206 TGTCTTTCATGTGGTTTGCAAT 57.331 36.364 0.00 0.00 0.00 3.56
2283 4608 4.462508 TTGTCTTTCATGTGGTTTGCAA 57.537 36.364 0.00 0.00 0.00 4.08
2284 4609 4.462508 TTTGTCTTTCATGTGGTTTGCA 57.537 36.364 0.00 0.00 0.00 4.08
2285 4610 7.656707 AATATTTGTCTTTCATGTGGTTTGC 57.343 32.000 0.00 0.00 0.00 3.68
2287 4612 9.927668 CCTAAATATTTGTCTTTCATGTGGTTT 57.072 29.630 11.05 0.00 0.00 3.27
2288 4613 9.308000 TCCTAAATATTTGTCTTTCATGTGGTT 57.692 29.630 11.05 0.00 0.00 3.67
2289 4614 8.877864 TCCTAAATATTTGTCTTTCATGTGGT 57.122 30.769 11.05 0.00 0.00 4.16
2295 4620 9.189156 CCTCCATTCCTAAATATTTGTCTTTCA 57.811 33.333 11.05 0.00 0.00 2.69
2296 4621 8.633561 CCCTCCATTCCTAAATATTTGTCTTTC 58.366 37.037 11.05 0.00 0.00 2.62
2297 4622 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
2298 4623 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
2299 4624 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
2300 4625 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
2301 4626 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
2302 4627 9.813826 AATACTCCCTCCATTCCTAAATATTTG 57.186 33.333 11.05 1.40 0.00 2.32
2303 4628 9.813826 CAATACTCCCTCCATTCCTAAATATTT 57.186 33.333 5.89 5.89 0.00 1.40
2304 4629 7.890655 GCAATACTCCCTCCATTCCTAAATATT 59.109 37.037 0.00 0.00 0.00 1.28
2305 4630 7.240616 AGCAATACTCCCTCCATTCCTAAATAT 59.759 37.037 0.00 0.00 0.00 1.28
2306 4631 6.562608 AGCAATACTCCCTCCATTCCTAAATA 59.437 38.462 0.00 0.00 0.00 1.40
2307 4632 5.373854 AGCAATACTCCCTCCATTCCTAAAT 59.626 40.000 0.00 0.00 0.00 1.40
2308 4633 4.726825 AGCAATACTCCCTCCATTCCTAAA 59.273 41.667 0.00 0.00 0.00 1.85
2309 4634 4.307259 AGCAATACTCCCTCCATTCCTAA 58.693 43.478 0.00 0.00 0.00 2.69
2310 4635 3.941629 AGCAATACTCCCTCCATTCCTA 58.058 45.455 0.00 0.00 0.00 2.94
2311 4636 2.781667 AGCAATACTCCCTCCATTCCT 58.218 47.619 0.00 0.00 0.00 3.36
2312 4637 3.584733 AAGCAATACTCCCTCCATTCC 57.415 47.619 0.00 0.00 0.00 3.01
2313 4638 6.538263 AGATTAAGCAATACTCCCTCCATTC 58.462 40.000 0.00 0.00 0.00 2.67
2314 4639 6.521527 AGATTAAGCAATACTCCCTCCATT 57.478 37.500 0.00 0.00 0.00 3.16
2315 4640 6.126361 ACAAGATTAAGCAATACTCCCTCCAT 60.126 38.462 0.00 0.00 0.00 3.41
2316 4641 5.191722 ACAAGATTAAGCAATACTCCCTCCA 59.808 40.000 0.00 0.00 0.00 3.86
2317 4642 5.685728 ACAAGATTAAGCAATACTCCCTCC 58.314 41.667 0.00 0.00 0.00 4.30
2318 4643 9.998106 TTATACAAGATTAAGCAATACTCCCTC 57.002 33.333 0.00 0.00 0.00 4.30
2342 4900 8.544622 TGTCCCAAAGAATAGTGACACATATTA 58.455 33.333 8.59 0.00 0.00 0.98
2348 4906 5.003804 ACATGTCCCAAAGAATAGTGACAC 58.996 41.667 0.00 0.00 35.76 3.67
2363 4921 3.144506 CTCTGGATATGCAACATGTCCC 58.855 50.000 17.48 4.87 0.00 4.46
2453 5040 7.394923 ACAGCCCAGATCTATTATAGTGTACTC 59.605 40.741 0.00 0.00 0.00 2.59
2458 5045 6.997655 TCAACAGCCCAGATCTATTATAGTG 58.002 40.000 0.00 0.00 0.00 2.74
2459 5046 7.805083 ATCAACAGCCCAGATCTATTATAGT 57.195 36.000 0.00 0.00 0.00 2.12
2460 5047 9.160496 GAAATCAACAGCCCAGATCTATTATAG 57.840 37.037 0.00 0.00 0.00 1.31
2477 5064 6.661805 GGACCCACTATTTAAGGAAATCAACA 59.338 38.462 0.00 0.00 36.62 3.33
2487 5074 6.096564 AGAGTTACTCGGACCCACTATTTAAG 59.903 42.308 6.73 0.00 35.36 1.85
2492 5079 3.666345 AGAGTTACTCGGACCCACTAT 57.334 47.619 6.73 0.00 35.36 2.12
2526 5113 1.420430 ACCTCCTCTTTTCACACGGA 58.580 50.000 0.00 0.00 0.00 4.69
2568 5155 8.142551 ACACGGTCACTATTATATCCTCTTTTC 58.857 37.037 0.00 0.00 0.00 2.29
2576 5163 7.592533 TCGCTTTAACACGGTCACTATTATATC 59.407 37.037 0.00 0.00 0.00 1.63
2578 5166 6.692681 GTCGCTTTAACACGGTCACTATTATA 59.307 38.462 0.00 0.00 0.00 0.98
2579 5167 5.517770 GTCGCTTTAACACGGTCACTATTAT 59.482 40.000 0.00 0.00 0.00 1.28
2583 5171 2.294233 AGTCGCTTTAACACGGTCACTA 59.706 45.455 0.00 0.00 0.00 2.74
2599 5189 6.018669 CCTTGAAGGTATTTTAGATGAGTCGC 60.019 42.308 2.25 0.00 0.00 5.19
2601 5191 9.620259 AATCCTTGAAGGTATTTTAGATGAGTC 57.380 33.333 11.60 0.00 36.53 3.36
2669 5506 9.230932 CTTACCAATTAGTACGCTTTACTAGAC 57.769 37.037 0.00 0.00 32.35 2.59
2756 5593 2.983907 TGTACGGTTGTCCAAACTGA 57.016 45.000 4.14 0.00 0.00 3.41
2950 5810 2.436646 CATGACCTGGTCCGGTGC 60.437 66.667 23.42 0.00 37.42 5.01
2971 5837 5.302568 TGTTCTCCTCATTTTCTGCAACAAT 59.697 36.000 0.00 0.00 0.00 2.71
2992 5858 3.338249 CCCATCTCATTCTCGTGTTGTT 58.662 45.455 0.00 0.00 0.00 2.83
2993 5859 2.936993 GCCCATCTCATTCTCGTGTTGT 60.937 50.000 0.00 0.00 0.00 3.32
2994 5860 1.667724 GCCCATCTCATTCTCGTGTTG 59.332 52.381 0.00 0.00 0.00 3.33
2999 5865 0.873054 GCATGCCCATCTCATTCTCG 59.127 55.000 6.36 0.00 0.00 4.04
3037 5906 4.775236 AGGTTTGCTAAGATCTCCATGAC 58.225 43.478 0.00 0.00 0.00 3.06
3069 5938 6.841755 ACTAGGCACAAATTCTCCTACTAGAT 59.158 38.462 0.00 0.00 32.11 1.98
3074 5943 6.655425 AGAAAACTAGGCACAAATTCTCCTAC 59.345 38.462 0.00 0.00 0.00 3.18
3078 5947 6.809630 AGAGAAAACTAGGCACAAATTCTC 57.190 37.500 11.85 11.85 40.82 2.87
3100 5969 7.549615 ACACAGATTGTTCATGATCATGTAG 57.450 36.000 30.01 13.59 39.72 2.74
3102 5971 6.829229 AACACAGATTGTTCATGATCATGT 57.171 33.333 30.01 14.48 46.05 3.21
3119 5988 4.806640 AAATGGCCCAAATAGAACACAG 57.193 40.909 0.00 0.00 0.00 3.66
3187 6056 3.495193 CATAATGCATATGCTCAACCGC 58.505 45.455 27.13 0.00 42.66 5.68
3188 6057 3.752747 TCCATAATGCATATGCTCAACCG 59.247 43.478 27.13 11.65 40.15 4.44
3260 6129 0.669625 GAGTTTGTCGTTCTCCCCCG 60.670 60.000 0.00 0.00 0.00 5.73
3274 6143 4.625083 GCAGAAGCCTGAATCCTAGAGTTT 60.625 45.833 0.00 0.00 43.02 2.66
3289 6158 0.322906 AGCCCAACTTAGCAGAAGCC 60.323 55.000 0.00 0.00 43.56 4.35
3290 6159 1.090728 GAGCCCAACTTAGCAGAAGC 58.909 55.000 0.00 0.00 42.56 3.86
3294 6163 3.494048 CCATCTAGAGCCCAACTTAGCAG 60.494 52.174 0.00 0.00 0.00 4.24
3323 6192 1.152830 ACCGAGCCACCCAAACAAT 59.847 52.632 0.00 0.00 0.00 2.71
3327 6196 2.203280 CACACCGAGCCACCCAAA 60.203 61.111 0.00 0.00 0.00 3.28
3382 6252 1.141858 GAAGGAGGGAGGGCATAACTG 59.858 57.143 0.00 0.00 0.00 3.16
3493 6364 7.309744 CCTTATTTAGAGGAGCCTACATCAGAG 60.310 44.444 0.00 0.00 36.33 3.35
3494 6365 6.495181 CCTTATTTAGAGGAGCCTACATCAGA 59.505 42.308 0.00 0.00 36.33 3.27
3508 6411 8.697507 AATATGTGAAAGCCCCTTATTTAGAG 57.302 34.615 0.00 0.00 0.00 2.43
3515 6418 7.415086 TCCTTTAAATATGTGAAAGCCCCTTA 58.585 34.615 0.00 0.00 0.00 2.69
3517 6420 5.837829 TCCTTTAAATATGTGAAAGCCCCT 58.162 37.500 0.00 0.00 0.00 4.79
3528 6431 7.011950 TGTTCCACGCACTATCCTTTAAATATG 59.988 37.037 0.00 0.00 0.00 1.78
3546 6449 3.627577 CCATCCTTTATCCTTGTTCCACG 59.372 47.826 0.00 0.00 0.00 4.94
3547 6450 4.640647 GTCCATCCTTTATCCTTGTTCCAC 59.359 45.833 0.00 0.00 0.00 4.02
3558 6461 6.894339 AAAGTTTTGTCGTCCATCCTTTAT 57.106 33.333 0.00 0.00 0.00 1.40
3570 6473 4.966366 CAGCTGAAGAGAAAAGTTTTGTCG 59.034 41.667 17.08 6.75 0.00 4.35
3619 6522 0.685097 AAACTAGAACCGGCTGAGCA 59.315 50.000 6.82 0.00 0.00 4.26
3626 6529 5.065731 ACGACATAGAGTAAACTAGAACCGG 59.934 44.000 0.00 0.00 0.00 5.28
3700 6603 3.527533 CATGCTTTCCCATCACAATTGG 58.472 45.455 10.83 0.00 0.00 3.16
3706 6609 1.753073 CCTTCCATGCTTTCCCATCAC 59.247 52.381 0.00 0.00 0.00 3.06
3714 6617 0.978907 CCTTTGGCCTTCCATGCTTT 59.021 50.000 3.32 0.00 43.05 3.51
3720 6623 0.250727 CGTCTTCCTTTGGCCTTCCA 60.251 55.000 3.32 0.00 41.55 3.53
3801 6704 4.256920 TGCTAGGTTGAAGAGCTCAAATC 58.743 43.478 17.77 11.54 45.67 2.17
3827 6730 0.035534 TGTAGAATGTGCCACGCCAT 60.036 50.000 0.00 0.00 0.00 4.40
3996 6909 2.638325 TGGAAGAACCATCCCCAACTA 58.362 47.619 0.00 0.00 44.64 2.24
4020 6933 5.357257 GGATCTAGTTGTCCGAGCAAATAA 58.643 41.667 0.00 0.00 30.21 1.40
4027 6940 4.069304 CTCTAGGGATCTAGTTGTCCGAG 58.931 52.174 0.00 0.00 42.66 4.63
4038 6951 6.843333 TCTCATGTTTTCATCTCTAGGGATCT 59.157 38.462 0.76 0.00 38.64 2.75
4067 6980 2.712539 CGTTGCGAGGCACACAAA 59.287 55.556 0.00 0.00 38.71 2.83
4087 7000 1.926489 ATTAACCAGGGTGGGGCGA 60.926 57.895 0.00 0.00 43.37 5.54
4104 7017 5.241064 GCCTCAACATGATTTATGAGCTCAT 59.759 40.000 30.85 30.85 39.21 2.90
4134 7047 6.043938 AGTTTGTTGTAAGACCTCCCTATTCA 59.956 38.462 0.00 0.00 0.00 2.57
4147 7060 4.791734 GCGGGGAGAAAAGTTTGTTGTAAG 60.792 45.833 0.00 0.00 0.00 2.34
4266 7182 2.125673 GAGCATGTGGTACGCCGT 60.126 61.111 0.00 0.00 38.60 5.68
4342 7258 0.327867 TCCATCCTCCTTGGCTCCAT 60.328 55.000 0.00 0.00 34.06 3.41
4356 7272 2.544903 GCTAGAGCTTCTTCCGTCCATC 60.545 54.545 0.00 0.00 38.21 3.51
4362 7278 0.820871 ACCTGCTAGAGCTTCTTCCG 59.179 55.000 2.72 0.00 42.66 4.30
4368 7284 0.900647 ACGTCCACCTGCTAGAGCTT 60.901 55.000 2.72 0.00 42.66 3.74
4375 7291 2.279069 CCTCAGACGTCCACCTGCT 61.279 63.158 13.01 0.00 0.00 4.24
4389 7305 6.317789 CAAAAGATTGTGTAGCTTTCCTCA 57.682 37.500 0.00 0.00 31.91 3.86
4407 7324 0.752054 TTTGCCAGCCTCCACAAAAG 59.248 50.000 0.00 0.00 0.00 2.27
4427 7344 5.794894 ACGTCTTCAGTTGGAATAGAATGT 58.205 37.500 0.00 0.00 34.32 2.71
4474 7391 4.690748 ACACAACTGACAAGTATCGGATTG 59.309 41.667 0.00 0.00 34.77 2.67
4479 7396 3.649073 TCCACACAACTGACAAGTATCG 58.351 45.455 0.00 0.00 34.77 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.