Multiple sequence alignment - TraesCS3B01G448800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G448800 chr3B 100.000 4816 0 0 920 5735 689427699 689422884 0.000000e+00 8894.0
1 TraesCS3B01G448800 chr3B 100.000 587 0 0 1 587 689428618 689428032 0.000000e+00 1085.0
2 TraesCS3B01G448800 chr3B 100.000 35 0 0 1982 2016 200860773 200860739 1.330000e-06 65.8
3 TraesCS3B01G448800 chr3D 92.607 4342 182 58 922 5187 522956210 522951932 0.000000e+00 6111.0
4 TraesCS3B01G448800 chr3D 94.568 405 21 1 1 404 522956971 522956567 4.880000e-175 625.0
5 TraesCS3B01G448800 chr3D 96.353 329 12 0 5394 5722 446859167 446858839 5.050000e-150 542.0
6 TraesCS3B01G448800 chr3D 90.256 195 9 4 402 587 522956534 522956341 4.440000e-61 246.0
7 TraesCS3B01G448800 chr3A 92.312 3512 165 53 920 4399 657620703 657617265 0.000000e+00 4892.0
8 TraesCS3B01G448800 chr3A 91.139 790 55 9 4401 5179 657616948 657616163 0.000000e+00 1057.0
9 TraesCS3B01G448800 chr3A 94.321 405 22 1 1 404 657621463 657621059 2.270000e-173 619.0
10 TraesCS3B01G448800 chr3A 88.265 196 13 6 402 587 657621026 657620831 5.780000e-55 226.0
11 TraesCS3B01G448800 chr3A 82.110 218 14 7 5184 5392 657616109 657615908 4.600000e-36 163.0
12 TraesCS3B01G448800 chr3A 95.000 40 0 1 1977 2016 720370555 720370592 1.730000e-05 62.1
13 TraesCS3B01G448800 chr7D 95.441 329 15 0 5394 5722 49864219 49863891 5.090000e-145 525.0
14 TraesCS3B01G448800 chr7D 79.720 143 27 2 1162 1303 602189576 602189435 1.020000e-17 102.0
15 TraesCS3B01G448800 chr7D 88.462 52 2 4 1966 2015 108173851 108173802 6.210000e-05 60.2
16 TraesCS3B01G448800 chr4D 86.047 387 38 11 1551 1932 12843994 12844369 8.950000e-108 401.0
17 TraesCS3B01G448800 chr4D 84.737 380 41 12 1558 1932 197324233 197323866 1.170000e-96 364.0
18 TraesCS3B01G448800 chr4D 92.857 42 3 0 1975 2016 7650898 7650939 1.730000e-05 62.1
19 TraesCS3B01G448800 chr7A 85.271 387 41 11 1551 1932 337925079 337925454 9.010000e-103 385.0
20 TraesCS3B01G448800 chr7A 79.720 143 27 2 1162 1303 694018892 694018751 1.020000e-17 102.0
21 TraesCS3B01G448800 chr7A 88.679 53 4 2 1965 2016 230872820 230872769 4.800000e-06 63.9
22 TraesCS3B01G448800 chr2B 84.974 386 42 11 1551 1931 703575418 703575792 1.510000e-100 377.0
23 TraesCS3B01G448800 chr2B 78.899 218 36 10 5389 5601 703798955 703798743 7.750000e-29 139.0
24 TraesCS3B01G448800 chr2B 100.000 35 0 0 1982 2016 354879215 354879181 1.330000e-06 65.8
25 TraesCS3B01G448800 chrUn 83.947 380 39 11 1250 1615 71035816 71035445 1.530000e-90 344.0
26 TraesCS3B01G448800 chr7B 96.450 169 6 0 5389 5557 639808827 639808995 4.380000e-71 279.0
27 TraesCS3B01G448800 chr5A 83.396 265 32 4 5396 5650 445283111 445282849 9.610000e-58 235.0
28 TraesCS3B01G448800 chr6D 78.295 258 39 15 5394 5639 89173972 89174224 3.580000e-32 150.0
29 TraesCS3B01G448800 chr2A 79.255 188 29 9 5394 5575 44073053 44072870 7.800000e-24 122.0
30 TraesCS3B01G448800 chr2A 92.857 42 1 1 1975 2016 38968406 38968445 6.210000e-05 60.2
31 TraesCS3B01G448800 chr5B 97.222 36 1 0 1981 2016 35382462 35382427 1.730000e-05 62.1
32 TraesCS3B01G448800 chr5B 94.872 39 1 1 1987 2024 204185039 204185001 6.210000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G448800 chr3B 689422884 689428618 5734 True 4989.500000 8894 100.0000 1 5735 2 chr3B.!!$R2 5734
1 TraesCS3B01G448800 chr3D 522951932 522956971 5039 True 2327.333333 6111 92.4770 1 5187 3 chr3D.!!$R2 5186
2 TraesCS3B01G448800 chr3A 657615908 657621463 5555 True 1391.400000 4892 89.6294 1 5392 5 chr3A.!!$R1 5391

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
398 400 0.531090 TGGAAACTCCGTGAACACCG 60.531 55.000 0.00 0.0 40.17 4.94 F
1767 1843 0.107508 CCCCACGCATGTCTTCAGAT 60.108 55.000 0.00 0.0 0.00 2.90 F
2398 2478 1.950484 GCGGTGGGTGAAATGACTCAT 60.950 52.381 0.00 0.0 0.00 2.90 F
3309 3407 3.513515 TGTGAAAGAACTTTGCCAAACCT 59.486 39.130 4.48 0.0 32.11 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2010 2090 0.106708 TGTTTCTGAACAGCCGCTCT 59.893 50.000 0.0 0.0 40.71 4.09 R
2746 2826 2.846193 CAGGTTTTCTGGGAAAGACGA 58.154 47.619 0.0 0.0 39.76 4.20 R
3987 4104 0.617413 CAAGTGGGCAGGATCTCAGT 59.383 55.000 0.0 0.0 0.00 3.41 R
4738 5171 0.184692 TGTTGACAGGATTGGGTGCA 59.815 50.000 0.0 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 2.030363 GGCTACATGACTGAGGAGATCG 60.030 54.545 0.00 0.00 0.00 3.69
80 82 1.671379 GCCACCGTCCTTTGGTCTC 60.671 63.158 0.00 0.00 37.72 3.36
81 83 2.058675 CCACCGTCCTTTGGTCTCT 58.941 57.895 0.00 0.00 37.72 3.10
94 96 5.363868 CCTTTGGTCTCTACTCCATGACATA 59.636 44.000 0.00 0.00 33.50 2.29
103 105 4.156455 ACTCCATGACATATTCGCCTTT 57.844 40.909 0.00 0.00 0.00 3.11
169 171 9.046846 TCAAACCTATAGAAAAAGGATCTCTCA 57.953 33.333 0.00 0.00 36.66 3.27
303 305 7.095229 CCACGATATCCACCATTGTATAGTTTG 60.095 40.741 0.00 0.00 0.00 2.93
317 319 5.594725 TGTATAGTTTGTTGCCTTCACCAAA 59.405 36.000 0.00 0.00 33.13 3.28
340 342 1.132834 GCACGCCAACATGATGAATCA 59.867 47.619 4.25 0.00 41.70 2.57
347 349 4.808558 CCAACATGATGAATCAACCGTTT 58.191 39.130 4.25 0.00 40.69 3.60
354 356 6.324561 TGATGAATCAACCGTTTGAAATGA 57.675 33.333 0.00 0.00 45.01 2.57
377 379 4.811969 ATTGCCATCATGTTGATTGTGT 57.188 36.364 5.30 0.00 34.28 3.72
385 387 6.753279 CCATCATGTTGATTGTGTATGGAAAC 59.247 38.462 5.30 0.00 34.28 2.78
398 400 0.531090 TGGAAACTCCGTGAACACCG 60.531 55.000 0.00 0.00 40.17 4.94
454 491 6.149640 GGAAGTCCAAACCTTTAGATTGACTC 59.850 42.308 0.00 0.00 35.64 3.36
460 504 9.886132 TCCAAACCTTTAGATTGACTCTATAAC 57.114 33.333 0.00 0.00 36.35 1.89
461 505 9.667107 CCAAACCTTTAGATTGACTCTATAACA 57.333 33.333 0.00 0.00 36.35 2.41
494 538 8.548025 TGAGAGATTATTGATGTCCAAACCTTA 58.452 33.333 0.00 0.00 38.43 2.69
495 539 8.970859 AGAGATTATTGATGTCCAAACCTTAG 57.029 34.615 0.00 0.00 38.43 2.18
496 540 8.772250 AGAGATTATTGATGTCCAAACCTTAGA 58.228 33.333 0.00 0.00 38.43 2.10
497 541 9.566432 GAGATTATTGATGTCCAAACCTTAGAT 57.434 33.333 0.00 0.00 38.43 1.98
498 542 9.566432 AGATTATTGATGTCCAAACCTTAGATC 57.434 33.333 0.00 0.00 38.43 2.75
499 543 9.342308 GATTATTGATGTCCAAACCTTAGATCA 57.658 33.333 0.00 0.00 38.43 2.92
500 544 8.506168 TTATTGATGTCCAAACCTTAGATCAC 57.494 34.615 0.00 0.00 38.43 3.06
501 545 5.762179 TGATGTCCAAACCTTAGATCACT 57.238 39.130 0.00 0.00 0.00 3.41
502 546 6.126863 TGATGTCCAAACCTTAGATCACTT 57.873 37.500 0.00 0.00 0.00 3.16
503 547 5.939883 TGATGTCCAAACCTTAGATCACTTG 59.060 40.000 0.00 0.00 0.00 3.16
505 549 5.305585 TGTCCAAACCTTAGATCACTTGTC 58.694 41.667 0.00 0.00 0.00 3.18
506 550 4.389077 GTCCAAACCTTAGATCACTTGTCG 59.611 45.833 0.00 0.00 0.00 4.35
562 609 7.273381 CCCAAAATAACACTTTCTATTTCGCTG 59.727 37.037 0.00 0.00 29.50 5.18
940 987 2.278596 CGACCACGCATACCTCCG 60.279 66.667 0.00 0.00 0.00 4.63
941 988 2.585247 GACCACGCATACCTCCGC 60.585 66.667 0.00 0.00 0.00 5.54
942 989 4.157120 ACCACGCATACCTCCGCC 62.157 66.667 0.00 0.00 0.00 6.13
943 990 3.849951 CCACGCATACCTCCGCCT 61.850 66.667 0.00 0.00 0.00 5.52
944 991 2.279517 CACGCATACCTCCGCCTC 60.280 66.667 0.00 0.00 0.00 4.70
945 992 3.537874 ACGCATACCTCCGCCTCC 61.538 66.667 0.00 0.00 0.00 4.30
993 1046 1.610554 CGAAACCCTAGCTCCGGGAA 61.611 60.000 23.90 0.00 44.90 3.97
1005 1058 0.335019 TCCGGGAACAGAGGATGAGA 59.665 55.000 0.00 0.00 0.00 3.27
1011 1064 0.898320 AACAGAGGATGAGACCCACG 59.102 55.000 0.00 0.00 0.00 4.94
1400 1453 3.764237 TGAACCACTACCTTTCTGTCC 57.236 47.619 0.00 0.00 0.00 4.02
1456 1517 9.609346 TGATTTAGGCTAGTAAAGTAACCATTC 57.391 33.333 0.00 0.00 0.00 2.67
1494 1556 7.948278 CTGTAGGTGGATATTACAGTTAAGC 57.052 40.000 4.11 0.00 39.44 3.09
1502 1564 6.879993 TGGATATTACAGTTAAGCGGAAACAA 59.120 34.615 2.48 0.00 0.00 2.83
1505 1567 9.783256 GATATTACAGTTAAGCGGAAACAATTT 57.217 29.630 2.48 0.00 0.00 1.82
1517 1585 9.921637 AAGCGGAAACAATTTTATAAGATTTCA 57.078 25.926 0.00 0.00 0.00 2.69
1538 1606 6.882610 TCAAGTCATATGTAATGCCAATCC 57.117 37.500 1.90 0.00 0.00 3.01
1608 1681 4.227300 TGTATTAGGACCTGAATGTTGCCT 59.773 41.667 3.53 0.00 0.00 4.75
1615 1688 1.812571 CCTGAATGTTGCCTGTGGTAC 59.187 52.381 0.00 0.00 0.00 3.34
1625 1698 4.481368 TGCCTGTGGTACTAACTATTGG 57.519 45.455 0.00 0.00 0.00 3.16
1646 1722 6.493189 TGGCAGTATATCTTTGGTATGTCA 57.507 37.500 0.00 0.00 0.00 3.58
1657 1733 4.582973 TTGGTATGTCATGTGGGATCAA 57.417 40.909 0.00 0.00 0.00 2.57
1661 1737 4.889409 GGTATGTCATGTGGGATCAAATGT 59.111 41.667 0.00 0.00 39.17 2.71
1692 1768 6.783708 TGGTTTCTCAAAACTGTAATTGGT 57.216 33.333 6.45 0.00 43.55 3.67
1696 1772 6.633500 TTCTCAAAACTGTAATTGGTCAGG 57.367 37.500 10.32 0.00 36.17 3.86
1698 1774 6.126409 TCTCAAAACTGTAATTGGTCAGGTT 58.874 36.000 10.32 7.82 42.39 3.50
1699 1775 6.262273 TCTCAAAACTGTAATTGGTCAGGTTC 59.738 38.462 9.60 0.00 40.14 3.62
1713 1789 2.595463 GTTCTGCTGGTGCTGCCA 60.595 61.111 0.00 0.91 46.95 4.92
1732 1808 4.887071 TGCCACTGTTGTTGAGTAGATTTT 59.113 37.500 0.00 0.00 0.00 1.82
1733 1809 5.215160 GCCACTGTTGTTGAGTAGATTTTG 58.785 41.667 0.00 0.00 0.00 2.44
1741 1817 9.944663 TGTTGTTGAGTAGATTTTGTAAATCAC 57.055 29.630 13.00 9.41 0.00 3.06
1742 1818 9.394477 GTTGTTGAGTAGATTTTGTAAATCACC 57.606 33.333 13.00 4.65 0.00 4.02
1743 1819 8.106247 TGTTGAGTAGATTTTGTAAATCACCC 57.894 34.615 13.00 3.49 0.00 4.61
1744 1820 7.175990 TGTTGAGTAGATTTTGTAAATCACCCC 59.824 37.037 13.00 6.45 0.00 4.95
1745 1821 6.785076 TGAGTAGATTTTGTAAATCACCCCA 58.215 36.000 13.00 8.13 0.00 4.96
1746 1822 6.884295 TGAGTAGATTTTGTAAATCACCCCAG 59.116 38.462 13.00 0.00 0.00 4.45
1754 1830 2.137177 AAATCACCCCAGACCCCACG 62.137 60.000 0.00 0.00 0.00 4.94
1767 1843 0.107508 CCCCACGCATGTCTTCAGAT 60.108 55.000 0.00 0.00 0.00 2.90
1781 1857 5.763204 TGTCTTCAGATTTGTCTAAACACCC 59.237 40.000 0.00 0.00 34.35 4.61
1782 1858 5.763204 GTCTTCAGATTTGTCTAAACACCCA 59.237 40.000 0.00 0.00 34.35 4.51
1784 1860 7.004086 TCTTCAGATTTGTCTAAACACCCAAT 58.996 34.615 0.00 0.00 34.35 3.16
1856 1932 2.069273 CGGTGAACTGAACTGGACATC 58.931 52.381 0.00 0.00 0.00 3.06
1876 1952 2.957680 TCTGCCAAAAACAGCATCAGAA 59.042 40.909 0.00 0.00 38.56 3.02
1995 2075 6.542735 AGTGTTTTTCTGAAAAGTACTCCCTC 59.457 38.462 19.54 0.00 35.53 4.30
1996 2076 5.826208 TGTTTTTCTGAAAAGTACTCCCTCC 59.174 40.000 14.52 0.00 35.53 4.30
1997 2077 3.955650 TTCTGAAAAGTACTCCCTCCG 57.044 47.619 0.00 0.00 0.00 4.63
1998 2078 2.885616 TCTGAAAAGTACTCCCTCCGT 58.114 47.619 0.00 0.00 0.00 4.69
1999 2079 4.038271 TCTGAAAAGTACTCCCTCCGTA 57.962 45.455 0.00 0.00 0.00 4.02
2000 2080 4.410099 TCTGAAAAGTACTCCCTCCGTAA 58.590 43.478 0.00 0.00 0.00 3.18
2001 2081 4.834496 TCTGAAAAGTACTCCCTCCGTAAA 59.166 41.667 0.00 0.00 0.00 2.01
2002 2082 5.047519 TCTGAAAAGTACTCCCTCCGTAAAG 60.048 44.000 0.00 0.00 0.00 1.85
2003 2083 4.834496 TGAAAAGTACTCCCTCCGTAAAGA 59.166 41.667 0.00 0.00 0.00 2.52
2004 2084 5.305128 TGAAAAGTACTCCCTCCGTAAAGAA 59.695 40.000 0.00 0.00 0.00 2.52
2005 2085 5.813513 AAAGTACTCCCTCCGTAAAGAAA 57.186 39.130 0.00 0.00 0.00 2.52
2006 2086 6.370186 AAAGTACTCCCTCCGTAAAGAAAT 57.630 37.500 0.00 0.00 0.00 2.17
2007 2087 7.486407 AAAGTACTCCCTCCGTAAAGAAATA 57.514 36.000 0.00 0.00 0.00 1.40
2008 2088 7.672122 AAGTACTCCCTCCGTAAAGAAATAT 57.328 36.000 0.00 0.00 0.00 1.28
2009 2089 8.773033 AAGTACTCCCTCCGTAAAGAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
2010 2090 8.773033 AGTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
2011 2091 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
2012 2092 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2013 2093 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2014 2094 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
2261 2341 9.342308 TGAGGGATATGTGACATTTCTTATTTC 57.658 33.333 14.14 7.14 0.00 2.17
2398 2478 1.950484 GCGGTGGGTGAAATGACTCAT 60.950 52.381 0.00 0.00 0.00 2.90
2623 2703 8.800370 TGTTTCAACAAGCTATGGTTCATATA 57.200 30.769 0.00 0.00 35.67 0.86
2821 2901 3.812053 GCTGGAATCATGCTTAGTGTAGG 59.188 47.826 0.00 0.00 0.00 3.18
2959 3056 4.775780 AGTAGGCAGAACATGGTGTACTTA 59.224 41.667 0.00 0.00 0.00 2.24
3185 3283 9.863650 ATCAATGTCCATCTTCTCTTCAATTAT 57.136 29.630 0.00 0.00 0.00 1.28
3192 3290 8.489489 TCCATCTTCTCTTCAATTATTACTGCT 58.511 33.333 0.00 0.00 0.00 4.24
3309 3407 3.513515 TGTGAAAGAACTTTGCCAAACCT 59.486 39.130 4.48 0.00 32.11 3.50
3315 3421 3.769300 AGAACTTTGCCAAACCTTTCACT 59.231 39.130 0.00 0.00 0.00 3.41
3368 3474 7.951245 CCACCTACCTCTATATCTATTATCCCC 59.049 44.444 0.00 0.00 0.00 4.81
3416 3522 6.814076 ATTCGCTTAAATCTTCTACACTCG 57.186 37.500 0.00 0.00 0.00 4.18
3433 3539 3.759618 CACTCGTTTCCCTTCTAGACTCT 59.240 47.826 0.00 0.00 0.00 3.24
3455 3561 6.899089 TCTGCAGAATAATTCCACCTTGATA 58.101 36.000 15.67 0.00 0.00 2.15
3571 3679 4.274705 GCTCGAGAAGATATCAGTGAGACA 59.725 45.833 18.75 0.00 0.00 3.41
3723 3837 9.710818 AGACCATAAAATAGTCCTTACTAGTCA 57.289 33.333 0.00 0.00 41.46 3.41
3761 3875 8.468720 TGCATGCATGAATATATGTTAAATGC 57.531 30.769 30.64 18.14 39.44 3.56
3904 4018 5.188359 AGAGGCCTATTTTGTGCAAATTGAT 59.812 36.000 4.42 0.00 36.43 2.57
3968 4085 6.231211 TCTCTGTTTTTCTCCTCATGTTACC 58.769 40.000 0.00 0.00 0.00 2.85
3987 4104 6.892456 TGTTACCTGCACCATTCCAAATATTA 59.108 34.615 0.00 0.00 0.00 0.98
4006 4123 0.617413 ACTGAGATCCTGCCCACTTG 59.383 55.000 0.00 0.00 0.00 3.16
4115 4233 9.891828 TGTTAAGAACATAAAATGCTGTTACTG 57.108 29.630 0.00 0.00 35.80 2.74
4254 4372 8.616076 AGCTAATATCAGAATACAGTGTTTTGC 58.384 33.333 0.00 0.00 0.00 3.68
4255 4373 8.616076 GCTAATATCAGAATACAGTGTTTTGCT 58.384 33.333 0.00 0.00 0.00 3.91
4259 4377 9.846248 ATATCAGAATACAGTGTTTTGCTTTTC 57.154 29.630 0.00 0.00 0.00 2.29
4260 4378 7.094508 TCAGAATACAGTGTTTTGCTTTTCA 57.905 32.000 0.00 0.00 0.00 2.69
4261 4379 7.195646 TCAGAATACAGTGTTTTGCTTTTCAG 58.804 34.615 0.00 0.00 0.00 3.02
4273 4391 5.596836 TTGCTTTTCAGTTGAGTCCATTT 57.403 34.783 0.00 0.00 0.00 2.32
4280 4398 5.319043 TCAGTTGAGTCCATTTTACCCTT 57.681 39.130 0.00 0.00 0.00 3.95
4288 4406 6.603201 TGAGTCCATTTTACCCTTGATTGATC 59.397 38.462 0.00 0.00 0.00 2.92
4381 4499 4.504858 AGACATTAGCGTAGGGAGTTTTG 58.495 43.478 0.00 0.00 0.00 2.44
4446 4879 3.791245 CTTGAAGCTGAGGGAGTATGTC 58.209 50.000 0.00 0.00 0.00 3.06
4491 4924 3.818210 ACATAATGTTGGACGACAAGCAA 59.182 39.130 0.00 0.00 40.38 3.91
4587 5020 3.506067 GTCTTTTCGGGATGAACATTGGT 59.494 43.478 0.00 0.00 35.97 3.67
4593 5026 5.816955 TCGGGATGAACATTGGTATATCA 57.183 39.130 2.12 0.00 0.00 2.15
4602 5035 8.500753 TGAACATTGGTATATCACTTTACACC 57.499 34.615 0.00 0.00 0.00 4.16
4738 5171 0.630673 TGGGCTATTGCAATGAGGGT 59.369 50.000 22.27 0.00 41.91 4.34
4807 5240 3.905249 CCTAAAAGAGGGCGGCAC 58.095 61.111 12.47 0.00 42.39 5.01
4824 5257 0.732571 CACGCGCCTGGATTGTATTT 59.267 50.000 5.73 0.00 0.00 1.40
4845 5278 6.909550 TTTGTACCTGAAAATGCATACCTT 57.090 33.333 0.00 0.00 0.00 3.50
4865 5299 5.222254 ACCTTTAACCTATCCCTTGAAAGCA 60.222 40.000 0.00 0.00 0.00 3.91
5053 5497 8.752005 AGTTTGTCTTGCCATTGTATATGTAT 57.248 30.769 0.00 0.00 0.00 2.29
5054 5498 9.845740 AGTTTGTCTTGCCATTGTATATGTATA 57.154 29.630 0.00 0.00 0.00 1.47
5108 5554 1.355720 AGAAATGCTGGTACTGGCCTT 59.644 47.619 3.32 0.00 0.00 4.35
5139 5586 5.339200 CCAGGGGAGAGTTATTACATGTGTT 60.339 44.000 9.11 0.00 0.00 3.32
5190 5688 7.160547 TGTTGGTTTGTACTCTGATCGTATA 57.839 36.000 0.00 0.00 0.00 1.47
5236 5734 4.047822 CGAGAGAGATTTGCATCACTACC 58.952 47.826 0.00 0.00 31.05 3.18
5249 5747 6.894682 TGCATCACTACCAATAATAACCTGA 58.105 36.000 0.00 0.00 0.00 3.86
5253 5751 9.613428 CATCACTACCAATAATAACCTGAAGAA 57.387 33.333 0.00 0.00 0.00 2.52
5280 5778 2.162408 CAGGAAAATTTCTCGAGCCACC 59.838 50.000 7.81 4.26 0.00 4.61
5302 5800 4.829492 CCATAGGGAAAGCAAGGGAAATAG 59.171 45.833 0.00 0.00 35.59 1.73
5304 5802 6.410388 CCATAGGGAAAGCAAGGGAAATAGTA 60.410 42.308 0.00 0.00 35.59 1.82
5306 5804 3.952323 GGGAAAGCAAGGGAAATAGTACC 59.048 47.826 0.00 0.00 0.00 3.34
5311 5814 7.310423 GGAAAGCAAGGGAAATAGTACCAAAAT 60.310 37.037 0.00 0.00 0.00 1.82
5338 5841 5.129485 TGTCAAAGCCAAAATAGGGAAAACA 59.871 36.000 0.00 0.00 0.00 2.83
5340 5843 6.540551 GTCAAAGCCAAAATAGGGAAAACAAA 59.459 34.615 0.00 0.00 0.00 2.83
5341 5844 7.066404 GTCAAAGCCAAAATAGGGAAAACAAAA 59.934 33.333 0.00 0.00 0.00 2.44
5342 5845 7.611855 TCAAAGCCAAAATAGGGAAAACAAAAA 59.388 29.630 0.00 0.00 0.00 1.94
5392 5895 5.562890 GCAAATTCTAGCAGGACGACTTTTT 60.563 40.000 0.00 0.00 0.00 1.94
5393 5896 5.864628 AATTCTAGCAGGACGACTTTTTC 57.135 39.130 0.00 0.00 0.00 2.29
5416 5919 7.818493 TCGATTTAGCTATATGTCATTCAGC 57.182 36.000 1.01 9.32 0.00 4.26
5417 5920 7.606349 TCGATTTAGCTATATGTCATTCAGCT 58.394 34.615 19.20 19.20 44.43 4.24
5418 5921 7.543520 TCGATTTAGCTATATGTCATTCAGCTG 59.456 37.037 22.14 7.63 42.34 4.24
5419 5922 7.543520 CGATTTAGCTATATGTCATTCAGCTGA 59.456 37.037 22.14 13.74 42.34 4.26
5420 5923 9.381033 GATTTAGCTATATGTCATTCAGCTGAT 57.619 33.333 19.04 17.32 42.34 2.90
5421 5924 9.736414 ATTTAGCTATATGTCATTCAGCTGATT 57.264 29.630 19.04 11.66 42.34 2.57
5422 5925 9.565090 TTTAGCTATATGTCATTCAGCTGATTT 57.435 29.630 19.04 5.48 42.34 2.17
5423 5926 9.565090 TTAGCTATATGTCATTCAGCTGATTTT 57.435 29.630 19.04 2.65 42.34 1.82
5424 5927 8.461249 AGCTATATGTCATTCAGCTGATTTTT 57.539 30.769 19.04 3.58 40.92 1.94
5443 5946 5.584253 TTTTTGATTTTGGGTCAGTCGAA 57.416 34.783 0.00 0.00 0.00 3.71
5444 5947 5.782893 TTTTGATTTTGGGTCAGTCGAAT 57.217 34.783 0.00 0.00 0.00 3.34
5445 5948 5.782893 TTTGATTTTGGGTCAGTCGAATT 57.217 34.783 0.00 0.00 0.00 2.17
5446 5949 5.782893 TTGATTTTGGGTCAGTCGAATTT 57.217 34.783 0.00 0.00 0.00 1.82
5447 5950 5.371115 TGATTTTGGGTCAGTCGAATTTC 57.629 39.130 0.00 0.00 0.00 2.17
5448 5951 5.070001 TGATTTTGGGTCAGTCGAATTTCT 58.930 37.500 0.00 0.00 0.00 2.52
5449 5952 4.829064 TTTTGGGTCAGTCGAATTTCTG 57.171 40.909 0.00 0.00 0.00 3.02
5450 5953 2.472695 TGGGTCAGTCGAATTTCTGG 57.527 50.000 1.40 0.00 33.13 3.86
5451 5954 1.087501 GGGTCAGTCGAATTTCTGGC 58.912 55.000 1.40 0.00 35.81 4.85
5452 5955 1.339151 GGGTCAGTCGAATTTCTGGCT 60.339 52.381 5.49 0.00 36.65 4.75
5453 5956 1.734465 GGTCAGTCGAATTTCTGGCTG 59.266 52.381 13.21 13.21 36.65 4.85
5454 5957 2.417719 GTCAGTCGAATTTCTGGCTGT 58.582 47.619 16.62 0.00 34.05 4.40
5455 5958 2.808543 GTCAGTCGAATTTCTGGCTGTT 59.191 45.455 16.62 0.00 34.05 3.16
5456 5959 2.807967 TCAGTCGAATTTCTGGCTGTTG 59.192 45.455 16.62 1.12 33.13 3.33
5457 5960 2.095567 CAGTCGAATTTCTGGCTGTTGG 60.096 50.000 11.93 0.00 0.00 3.77
5458 5961 2.151202 GTCGAATTTCTGGCTGTTGGA 58.849 47.619 0.00 0.00 0.00 3.53
5459 5962 2.749621 GTCGAATTTCTGGCTGTTGGAT 59.250 45.455 0.00 0.00 0.00 3.41
5460 5963 3.191371 GTCGAATTTCTGGCTGTTGGATT 59.809 43.478 0.00 0.00 0.00 3.01
5461 5964 3.826157 TCGAATTTCTGGCTGTTGGATTT 59.174 39.130 0.00 0.00 0.00 2.17
5462 5965 3.922240 CGAATTTCTGGCTGTTGGATTTG 59.078 43.478 0.00 0.00 0.00 2.32
5463 5966 4.559300 CGAATTTCTGGCTGTTGGATTTGT 60.559 41.667 0.00 0.00 0.00 2.83
5464 5967 3.731652 TTTCTGGCTGTTGGATTTGTG 57.268 42.857 0.00 0.00 0.00 3.33
5465 5968 0.961019 TCTGGCTGTTGGATTTGTGC 59.039 50.000 0.00 0.00 0.00 4.57
5466 5969 0.963962 CTGGCTGTTGGATTTGTGCT 59.036 50.000 0.00 0.00 0.00 4.40
5467 5970 1.342174 CTGGCTGTTGGATTTGTGCTT 59.658 47.619 0.00 0.00 0.00 3.91
5468 5971 1.761784 TGGCTGTTGGATTTGTGCTTT 59.238 42.857 0.00 0.00 0.00 3.51
5469 5972 2.137523 GGCTGTTGGATTTGTGCTTTG 58.862 47.619 0.00 0.00 0.00 2.77
5470 5973 2.224018 GGCTGTTGGATTTGTGCTTTGA 60.224 45.455 0.00 0.00 0.00 2.69
5471 5974 3.054878 GCTGTTGGATTTGTGCTTTGAG 58.945 45.455 0.00 0.00 0.00 3.02
5472 5975 3.243501 GCTGTTGGATTTGTGCTTTGAGA 60.244 43.478 0.00 0.00 0.00 3.27
5473 5976 4.560108 GCTGTTGGATTTGTGCTTTGAGAT 60.560 41.667 0.00 0.00 0.00 2.75
5474 5977 4.873817 TGTTGGATTTGTGCTTTGAGATG 58.126 39.130 0.00 0.00 0.00 2.90
5475 5978 4.341806 TGTTGGATTTGTGCTTTGAGATGT 59.658 37.500 0.00 0.00 0.00 3.06
5476 5979 4.508461 TGGATTTGTGCTTTGAGATGTG 57.492 40.909 0.00 0.00 0.00 3.21
5477 5980 3.890756 TGGATTTGTGCTTTGAGATGTGT 59.109 39.130 0.00 0.00 0.00 3.72
5478 5981 4.232221 GGATTTGTGCTTTGAGATGTGTG 58.768 43.478 0.00 0.00 0.00 3.82
5479 5982 2.780065 TTGTGCTTTGAGATGTGTGC 57.220 45.000 0.00 0.00 0.00 4.57
5480 5983 1.971481 TGTGCTTTGAGATGTGTGCT 58.029 45.000 0.00 0.00 0.00 4.40
5481 5984 2.300433 TGTGCTTTGAGATGTGTGCTT 58.700 42.857 0.00 0.00 0.00 3.91
5482 5985 2.689471 TGTGCTTTGAGATGTGTGCTTT 59.311 40.909 0.00 0.00 0.00 3.51
5483 5986 3.882288 TGTGCTTTGAGATGTGTGCTTTA 59.118 39.130 0.00 0.00 0.00 1.85
5484 5987 4.023792 TGTGCTTTGAGATGTGTGCTTTAG 60.024 41.667 0.00 0.00 0.00 1.85
5485 5988 4.023707 GTGCTTTGAGATGTGTGCTTTAGT 60.024 41.667 0.00 0.00 0.00 2.24
5486 5989 4.580167 TGCTTTGAGATGTGTGCTTTAGTT 59.420 37.500 0.00 0.00 0.00 2.24
5487 5990 5.067674 TGCTTTGAGATGTGTGCTTTAGTTT 59.932 36.000 0.00 0.00 0.00 2.66
5488 5991 5.979517 GCTTTGAGATGTGTGCTTTAGTTTT 59.020 36.000 0.00 0.00 0.00 2.43
5489 5992 6.476706 GCTTTGAGATGTGTGCTTTAGTTTTT 59.523 34.615 0.00 0.00 0.00 1.94
5511 6014 8.472683 TTTTTCCTGTTCTGTATTTTGTGTTG 57.527 30.769 0.00 0.00 0.00 3.33
5512 6015 6.767524 TTCCTGTTCTGTATTTTGTGTTGT 57.232 33.333 0.00 0.00 0.00 3.32
5513 6016 6.130298 TCCTGTTCTGTATTTTGTGTTGTG 57.870 37.500 0.00 0.00 0.00 3.33
5514 6017 5.650266 TCCTGTTCTGTATTTTGTGTTGTGT 59.350 36.000 0.00 0.00 0.00 3.72
5515 6018 6.151985 TCCTGTTCTGTATTTTGTGTTGTGTT 59.848 34.615 0.00 0.00 0.00 3.32
5516 6019 6.253298 CCTGTTCTGTATTTTGTGTTGTGTTG 59.747 38.462 0.00 0.00 0.00 3.33
5517 6020 6.096036 TGTTCTGTATTTTGTGTTGTGTTGG 58.904 36.000 0.00 0.00 0.00 3.77
5518 6021 5.255710 TCTGTATTTTGTGTTGTGTTGGG 57.744 39.130 0.00 0.00 0.00 4.12
5519 6022 3.786635 TGTATTTTGTGTTGTGTTGGGC 58.213 40.909 0.00 0.00 0.00 5.36
5520 6023 2.323968 ATTTTGTGTTGTGTTGGGCC 57.676 45.000 0.00 0.00 0.00 5.80
5521 6024 1.270907 TTTTGTGTTGTGTTGGGCCT 58.729 45.000 4.53 0.00 0.00 5.19
5522 6025 2.145397 TTTGTGTTGTGTTGGGCCTA 57.855 45.000 4.53 0.00 0.00 3.93
5523 6026 1.686355 TTGTGTTGTGTTGGGCCTAG 58.314 50.000 4.53 0.00 0.00 3.02
5524 6027 0.548989 TGTGTTGTGTTGGGCCTAGT 59.451 50.000 4.53 0.00 0.00 2.57
5525 6028 1.064314 TGTGTTGTGTTGGGCCTAGTT 60.064 47.619 4.53 0.00 0.00 2.24
5526 6029 1.336755 GTGTTGTGTTGGGCCTAGTTG 59.663 52.381 4.53 0.00 0.00 3.16
5527 6030 1.213182 TGTTGTGTTGGGCCTAGTTGA 59.787 47.619 4.53 0.00 0.00 3.18
5528 6031 2.303175 GTTGTGTTGGGCCTAGTTGAA 58.697 47.619 4.53 0.00 0.00 2.69
5529 6032 2.691011 GTTGTGTTGGGCCTAGTTGAAA 59.309 45.455 4.53 0.00 0.00 2.69
5530 6033 3.237268 TGTGTTGGGCCTAGTTGAAAT 57.763 42.857 4.53 0.00 0.00 2.17
5531 6034 3.153919 TGTGTTGGGCCTAGTTGAAATC 58.846 45.455 4.53 0.00 0.00 2.17
5532 6035 2.161609 GTGTTGGGCCTAGTTGAAATCG 59.838 50.000 4.53 0.00 0.00 3.34
5533 6036 2.039216 TGTTGGGCCTAGTTGAAATCGA 59.961 45.455 4.53 0.00 0.00 3.59
5534 6037 2.396590 TGGGCCTAGTTGAAATCGAC 57.603 50.000 4.53 0.00 0.00 4.20
5535 6038 1.906574 TGGGCCTAGTTGAAATCGACT 59.093 47.619 4.53 8.33 42.86 4.18
5536 6039 2.280628 GGGCCTAGTTGAAATCGACTG 58.719 52.381 12.61 4.15 40.63 3.51
5537 6040 2.093658 GGGCCTAGTTGAAATCGACTGA 60.094 50.000 12.61 0.00 40.63 3.41
5538 6041 2.930682 GGCCTAGTTGAAATCGACTGAC 59.069 50.000 12.61 3.21 40.63 3.51
5539 6042 2.930682 GCCTAGTTGAAATCGACTGACC 59.069 50.000 12.61 0.00 40.63 4.02
5540 6043 3.179830 CCTAGTTGAAATCGACTGACCG 58.820 50.000 12.61 0.00 40.63 4.79
5541 6044 1.429463 AGTTGAAATCGACTGACCGC 58.571 50.000 2.47 0.00 39.07 5.68
5542 6045 1.000955 AGTTGAAATCGACTGACCGCT 59.999 47.619 2.47 0.00 39.07 5.52
5543 6046 1.126846 GTTGAAATCGACTGACCGCTG 59.873 52.381 0.00 0.00 0.00 5.18
5544 6047 0.317160 TGAAATCGACTGACCGCTGT 59.683 50.000 0.00 0.00 0.00 4.40
5545 6048 1.270094 TGAAATCGACTGACCGCTGTT 60.270 47.619 0.00 0.00 0.00 3.16
5546 6049 1.798813 GAAATCGACTGACCGCTGTTT 59.201 47.619 0.00 0.00 0.00 2.83
5547 6050 1.429463 AATCGACTGACCGCTGTTTC 58.571 50.000 0.00 0.00 0.00 2.78
5548 6051 0.603569 ATCGACTGACCGCTGTTTCT 59.396 50.000 0.00 0.00 0.00 2.52
5549 6052 1.241165 TCGACTGACCGCTGTTTCTA 58.759 50.000 0.00 0.00 0.00 2.10
5550 6053 1.199327 TCGACTGACCGCTGTTTCTAG 59.801 52.381 0.00 0.00 0.00 2.43
5551 6054 1.068472 CGACTGACCGCTGTTTCTAGT 60.068 52.381 0.00 0.00 0.00 2.57
5552 6055 2.597520 GACTGACCGCTGTTTCTAGTC 58.402 52.381 0.00 0.00 0.00 2.59
5553 6056 1.961394 ACTGACCGCTGTTTCTAGTCA 59.039 47.619 0.00 0.00 36.16 3.41
5554 6057 2.600731 CTGACCGCTGTTTCTAGTCAG 58.399 52.381 4.27 4.27 45.88 3.51
5555 6058 1.961394 TGACCGCTGTTTCTAGTCAGT 59.039 47.619 11.53 0.00 32.75 3.41
5556 6059 2.030185 TGACCGCTGTTTCTAGTCAGTC 60.030 50.000 11.53 0.00 32.75 3.51
5557 6060 1.068472 ACCGCTGTTTCTAGTCAGTCG 60.068 52.381 11.53 13.19 34.57 4.18
5558 6061 1.199327 CCGCTGTTTCTAGTCAGTCGA 59.801 52.381 18.60 0.00 35.24 4.20
5559 6062 2.159366 CCGCTGTTTCTAGTCAGTCGAT 60.159 50.000 18.60 0.00 35.24 3.59
5560 6063 3.502920 CGCTGTTTCTAGTCAGTCGATT 58.497 45.455 15.38 0.00 35.24 3.34
5561 6064 3.301906 CGCTGTTTCTAGTCAGTCGATTG 59.698 47.826 0.68 0.68 35.24 2.67
5562 6065 4.238514 GCTGTTTCTAGTCAGTCGATTGT 58.761 43.478 7.87 0.00 34.57 2.71
5563 6066 4.090642 GCTGTTTCTAGTCAGTCGATTGTG 59.909 45.833 7.87 0.00 34.57 3.33
5564 6067 5.196341 TGTTTCTAGTCAGTCGATTGTGT 57.804 39.130 7.87 0.00 0.00 3.72
5565 6068 6.321848 TGTTTCTAGTCAGTCGATTGTGTA 57.678 37.500 7.87 0.58 0.00 2.90
5566 6069 6.920817 TGTTTCTAGTCAGTCGATTGTGTAT 58.079 36.000 7.87 0.00 0.00 2.29
5567 6070 8.047413 TGTTTCTAGTCAGTCGATTGTGTATA 57.953 34.615 7.87 0.00 0.00 1.47
5568 6071 8.683615 TGTTTCTAGTCAGTCGATTGTGTATAT 58.316 33.333 7.87 0.00 0.00 0.86
5569 6072 8.959058 GTTTCTAGTCAGTCGATTGTGTATATG 58.041 37.037 7.87 0.00 0.00 1.78
5570 6073 7.203255 TCTAGTCAGTCGATTGTGTATATGG 57.797 40.000 7.87 0.00 0.00 2.74
5571 6074 5.201713 AGTCAGTCGATTGTGTATATGGG 57.798 43.478 7.87 0.00 0.00 4.00
5572 6075 3.741344 GTCAGTCGATTGTGTATATGGGC 59.259 47.826 7.87 0.00 0.00 5.36
5573 6076 3.641436 TCAGTCGATTGTGTATATGGGCT 59.359 43.478 7.87 0.00 0.00 5.19
5574 6077 3.990469 CAGTCGATTGTGTATATGGGCTC 59.010 47.826 0.00 0.00 0.00 4.70
5575 6078 2.987149 GTCGATTGTGTATATGGGCTCG 59.013 50.000 0.00 0.00 0.00 5.03
5576 6079 1.726791 CGATTGTGTATATGGGCTCGC 59.273 52.381 0.00 0.00 0.00 5.03
5577 6080 2.610479 CGATTGTGTATATGGGCTCGCT 60.610 50.000 0.00 0.00 0.00 4.93
5578 6081 2.238942 TTGTGTATATGGGCTCGCTG 57.761 50.000 0.00 0.00 0.00 5.18
5579 6082 1.408969 TGTGTATATGGGCTCGCTGA 58.591 50.000 0.00 0.00 0.00 4.26
5580 6083 1.341209 TGTGTATATGGGCTCGCTGAG 59.659 52.381 1.80 1.80 0.00 3.35
5589 6092 4.463879 CTCGCTGAGCCTGGTGGG 62.464 72.222 0.00 0.00 38.36 4.61
5593 6096 4.729918 CTGAGCCTGGTGGGTGCC 62.730 72.222 0.00 0.00 45.24 5.01
5595 6098 4.729918 GAGCCTGGTGGGTGCCTG 62.730 72.222 0.00 0.00 45.24 4.85
5597 6100 4.603535 GCCTGGTGGGTGCCTGTT 62.604 66.667 0.00 0.00 37.43 3.16
5598 6101 2.198426 CCTGGTGGGTGCCTGTTT 59.802 61.111 0.00 0.00 0.00 2.83
5599 6102 1.457455 CCTGGTGGGTGCCTGTTTT 60.457 57.895 0.00 0.00 0.00 2.43
5600 6103 1.741525 CTGGTGGGTGCCTGTTTTG 59.258 57.895 0.00 0.00 0.00 2.44
5601 6104 1.000993 TGGTGGGTGCCTGTTTTGT 59.999 52.632 0.00 0.00 0.00 2.83
5602 6105 1.040339 TGGTGGGTGCCTGTTTTGTC 61.040 55.000 0.00 0.00 0.00 3.18
5603 6106 1.739667 GTGGGTGCCTGTTTTGTCC 59.260 57.895 0.00 0.00 0.00 4.02
5604 6107 1.826054 TGGGTGCCTGTTTTGTCCG 60.826 57.895 0.00 0.00 0.00 4.79
5605 6108 2.335011 GGTGCCTGTTTTGTCCGC 59.665 61.111 0.00 0.00 0.00 5.54
5606 6109 2.335011 GTGCCTGTTTTGTCCGCC 59.665 61.111 0.00 0.00 0.00 6.13
5607 6110 2.909965 TGCCTGTTTTGTCCGCCC 60.910 61.111 0.00 0.00 0.00 6.13
5608 6111 4.038080 GCCTGTTTTGTCCGCCCG 62.038 66.667 0.00 0.00 0.00 6.13
5609 6112 2.593436 CCTGTTTTGTCCGCCCGT 60.593 61.111 0.00 0.00 0.00 5.28
5610 6113 2.190841 CCTGTTTTGTCCGCCCGTT 61.191 57.895 0.00 0.00 0.00 4.44
5611 6114 0.885596 CCTGTTTTGTCCGCCCGTTA 60.886 55.000 0.00 0.00 0.00 3.18
5612 6115 0.945813 CTGTTTTGTCCGCCCGTTAA 59.054 50.000 0.00 0.00 0.00 2.01
5613 6116 0.662085 TGTTTTGTCCGCCCGTTAAC 59.338 50.000 0.00 0.00 0.00 2.01
5614 6117 0.662085 GTTTTGTCCGCCCGTTAACA 59.338 50.000 6.39 0.00 0.00 2.41
5615 6118 1.267533 GTTTTGTCCGCCCGTTAACAT 59.732 47.619 6.39 0.00 0.00 2.71
5616 6119 0.875728 TTTGTCCGCCCGTTAACATG 59.124 50.000 6.39 0.00 0.00 3.21
5617 6120 1.579084 TTGTCCGCCCGTTAACATGC 61.579 55.000 6.39 6.36 0.00 4.06
5618 6121 2.437002 TCCGCCCGTTAACATGCC 60.437 61.111 6.39 0.00 0.00 4.40
5619 6122 2.437716 CCGCCCGTTAACATGCCT 60.438 61.111 6.39 0.00 0.00 4.75
5620 6123 2.469516 CCGCCCGTTAACATGCCTC 61.470 63.158 6.39 0.00 0.00 4.70
5621 6124 1.449601 CGCCCGTTAACATGCCTCT 60.450 57.895 6.39 0.00 0.00 3.69
5622 6125 1.429148 CGCCCGTTAACATGCCTCTC 61.429 60.000 6.39 0.00 0.00 3.20
5623 6126 1.429148 GCCCGTTAACATGCCTCTCG 61.429 60.000 6.39 0.00 0.00 4.04
5624 6127 1.429148 CCCGTTAACATGCCTCTCGC 61.429 60.000 6.39 0.00 38.31 5.03
5625 6128 1.429148 CCGTTAACATGCCTCTCGCC 61.429 60.000 6.39 0.00 36.24 5.54
5626 6129 0.460284 CGTTAACATGCCTCTCGCCT 60.460 55.000 6.39 0.00 36.24 5.52
5627 6130 1.202371 CGTTAACATGCCTCTCGCCTA 60.202 52.381 6.39 0.00 36.24 3.93
5628 6131 2.474816 GTTAACATGCCTCTCGCCTAG 58.525 52.381 0.00 0.00 36.24 3.02
5629 6132 0.389391 TAACATGCCTCTCGCCTAGC 59.611 55.000 0.00 0.00 36.24 3.42
5655 6158 4.738998 CACCTGCCCCGCATGGAA 62.739 66.667 0.00 0.00 38.13 3.53
5656 6159 4.740822 ACCTGCCCCGCATGGAAC 62.741 66.667 0.00 0.00 38.13 3.62
5661 6164 4.169696 CCCCGCATGGAACCGCTA 62.170 66.667 0.00 0.00 37.49 4.26
5662 6165 2.588877 CCCGCATGGAACCGCTAG 60.589 66.667 0.00 0.00 37.49 3.42
5663 6166 3.272334 CCGCATGGAACCGCTAGC 61.272 66.667 4.06 4.06 37.49 3.42
5664 6167 2.511373 CGCATGGAACCGCTAGCA 60.511 61.111 16.45 0.00 0.00 3.49
5665 6168 2.528743 CGCATGGAACCGCTAGCAG 61.529 63.158 16.45 5.85 0.00 4.24
5666 6169 2.182842 GCATGGAACCGCTAGCAGG 61.183 63.158 16.45 18.39 0.00 4.85
5667 6170 2.182842 CATGGAACCGCTAGCAGGC 61.183 63.158 20.81 9.20 0.00 4.85
5668 6171 2.669133 ATGGAACCGCTAGCAGGCA 61.669 57.895 20.81 13.42 0.00 4.75
5669 6172 1.987807 ATGGAACCGCTAGCAGGCAT 61.988 55.000 20.81 14.70 0.00 4.40
5670 6173 1.452108 GGAACCGCTAGCAGGCATT 60.452 57.895 20.81 11.61 0.00 3.56
5671 6174 1.032114 GGAACCGCTAGCAGGCATTT 61.032 55.000 20.81 11.04 0.00 2.32
5672 6175 0.378610 GAACCGCTAGCAGGCATTTC 59.621 55.000 20.81 14.77 0.00 2.17
5673 6176 1.032114 AACCGCTAGCAGGCATTTCC 61.032 55.000 20.81 0.00 0.00 3.13
5674 6177 1.451927 CCGCTAGCAGGCATTTCCA 60.452 57.895 16.45 0.00 37.29 3.53
5675 6178 1.031571 CCGCTAGCAGGCATTTCCAA 61.032 55.000 16.45 0.00 37.29 3.53
5676 6179 0.379669 CGCTAGCAGGCATTTCCAAG 59.620 55.000 16.45 0.00 37.29 3.61
5677 6180 1.467920 GCTAGCAGGCATTTCCAAGT 58.532 50.000 10.63 0.00 37.29 3.16
5678 6181 1.821136 GCTAGCAGGCATTTCCAAGTT 59.179 47.619 10.63 0.00 37.29 2.66
5679 6182 2.232208 GCTAGCAGGCATTTCCAAGTTT 59.768 45.455 10.63 0.00 37.29 2.66
5680 6183 2.825861 AGCAGGCATTTCCAAGTTTG 57.174 45.000 0.00 0.00 37.29 2.93
5689 6192 4.275781 CCAAGTTTGGGTGCCTGT 57.724 55.556 2.87 0.00 44.70 4.00
5690 6193 2.515288 CCAAGTTTGGGTGCCTGTT 58.485 52.632 2.87 0.00 44.70 3.16
5691 6194 0.829990 CCAAGTTTGGGTGCCTGTTT 59.170 50.000 2.87 0.00 44.70 2.83
5692 6195 1.209261 CCAAGTTTGGGTGCCTGTTTT 59.791 47.619 2.87 0.00 44.70 2.43
5693 6196 2.278854 CAAGTTTGGGTGCCTGTTTTG 58.721 47.619 0.00 0.00 0.00 2.44
5694 6197 0.177836 AGTTTGGGTGCCTGTTTTGC 59.822 50.000 0.00 0.00 0.00 3.68
5695 6198 0.177836 GTTTGGGTGCCTGTTTTGCT 59.822 50.000 0.00 0.00 0.00 3.91
5696 6199 0.463620 TTTGGGTGCCTGTTTTGCTC 59.536 50.000 0.00 0.00 0.00 4.26
5697 6200 1.733402 TTGGGTGCCTGTTTTGCTCG 61.733 55.000 0.00 0.00 0.00 5.03
5698 6201 2.050077 GGTGCCTGTTTTGCTCGC 60.050 61.111 0.00 0.00 0.00 5.03
5699 6202 2.555547 GGTGCCTGTTTTGCTCGCT 61.556 57.895 0.00 0.00 0.00 4.93
5700 6203 1.360192 GTGCCTGTTTTGCTCGCTT 59.640 52.632 0.00 0.00 0.00 4.68
5701 6204 0.936297 GTGCCTGTTTTGCTCGCTTG 60.936 55.000 0.00 0.00 0.00 4.01
5702 6205 1.360192 GCCTGTTTTGCTCGCTTGT 59.640 52.632 0.00 0.00 0.00 3.16
5703 6206 0.249031 GCCTGTTTTGCTCGCTTGTT 60.249 50.000 0.00 0.00 0.00 2.83
5704 6207 1.802508 GCCTGTTTTGCTCGCTTGTTT 60.803 47.619 0.00 0.00 0.00 2.83
5705 6208 2.539476 CCTGTTTTGCTCGCTTGTTTT 58.461 42.857 0.00 0.00 0.00 2.43
5706 6209 2.282290 CCTGTTTTGCTCGCTTGTTTTG 59.718 45.455 0.00 0.00 0.00 2.44
5707 6210 2.923020 CTGTTTTGCTCGCTTGTTTTGT 59.077 40.909 0.00 0.00 0.00 2.83
5708 6211 3.321497 TGTTTTGCTCGCTTGTTTTGTT 58.679 36.364 0.00 0.00 0.00 2.83
5709 6212 3.366422 TGTTTTGCTCGCTTGTTTTGTTC 59.634 39.130 0.00 0.00 0.00 3.18
5710 6213 2.929531 TTGCTCGCTTGTTTTGTTCA 57.070 40.000 0.00 0.00 0.00 3.18
5711 6214 2.473530 TGCTCGCTTGTTTTGTTCAG 57.526 45.000 0.00 0.00 0.00 3.02
5712 6215 1.123655 GCTCGCTTGTTTTGTTCAGC 58.876 50.000 0.00 0.00 0.00 4.26
5713 6216 1.533756 GCTCGCTTGTTTTGTTCAGCA 60.534 47.619 0.00 0.00 0.00 4.41
5714 6217 2.796304 CTCGCTTGTTTTGTTCAGCAA 58.204 42.857 0.00 0.00 34.87 3.91
5715 6218 3.374745 CTCGCTTGTTTTGTTCAGCAAT 58.625 40.909 0.00 0.00 36.89 3.56
5716 6219 3.114809 TCGCTTGTTTTGTTCAGCAATG 58.885 40.909 0.00 0.00 36.89 2.82
5717 6220 3.114809 CGCTTGTTTTGTTCAGCAATGA 58.885 40.909 0.00 0.00 36.89 2.57
5718 6221 3.551082 CGCTTGTTTTGTTCAGCAATGAA 59.449 39.130 0.00 0.00 36.89 2.57
5719 6222 4.032672 CGCTTGTTTTGTTCAGCAATGAAA 59.967 37.500 0.00 0.00 36.89 2.69
5720 6223 5.276963 CGCTTGTTTTGTTCAGCAATGAAAT 60.277 36.000 0.00 0.00 36.89 2.17
5721 6224 6.131389 GCTTGTTTTGTTCAGCAATGAAATC 58.869 36.000 0.00 0.00 36.89 2.17
5722 6225 6.018507 GCTTGTTTTGTTCAGCAATGAAATCT 60.019 34.615 0.00 0.00 36.89 2.40
5723 6226 6.831727 TGTTTTGTTCAGCAATGAAATCTG 57.168 33.333 0.00 0.00 36.89 2.90
5724 6227 6.339730 TGTTTTGTTCAGCAATGAAATCTGT 58.660 32.000 0.00 0.00 36.89 3.41
5725 6228 6.817641 TGTTTTGTTCAGCAATGAAATCTGTT 59.182 30.769 0.00 0.00 36.89 3.16
5726 6229 7.333921 TGTTTTGTTCAGCAATGAAATCTGTTT 59.666 29.630 0.00 0.00 36.89 2.83
5727 6230 7.846644 TTTGTTCAGCAATGAAATCTGTTTT 57.153 28.000 0.00 0.00 36.89 2.43
5728 6231 6.831727 TGTTCAGCAATGAAATCTGTTTTG 57.168 33.333 0.00 0.00 0.00 2.44
5729 6232 5.234757 TGTTCAGCAATGAAATCTGTTTTGC 59.765 36.000 0.00 0.00 31.73 3.68
5730 6233 5.204409 TCAGCAATGAAATCTGTTTTGCT 57.796 34.783 2.81 2.81 38.69 3.91
5731 6234 5.224888 TCAGCAATGAAATCTGTTTTGCTC 58.775 37.500 5.55 0.00 37.01 4.26
5732 6235 4.387862 CAGCAATGAAATCTGTTTTGCTCC 59.612 41.667 5.55 0.00 37.01 4.70
5733 6236 4.282703 AGCAATGAAATCTGTTTTGCTCCT 59.717 37.500 2.81 0.00 35.19 3.69
5734 6237 5.477984 AGCAATGAAATCTGTTTTGCTCCTA 59.522 36.000 2.81 0.00 35.19 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 82 4.527509 AGGCGAATATGTCATGGAGTAG 57.472 45.455 0.00 0.00 0.00 2.57
81 83 4.955811 AAGGCGAATATGTCATGGAGTA 57.044 40.909 0.00 0.00 0.00 2.59
187 189 4.570772 GCGGCAACAAGACTCTTCATATTA 59.429 41.667 0.00 0.00 0.00 0.98
273 275 0.397941 ATGGTGGATATCGTGGGCAG 59.602 55.000 0.00 0.00 0.00 4.85
303 305 3.215642 GCCATTTGGTGAAGGCAAC 57.784 52.632 0.00 0.00 46.26 4.17
317 319 0.680601 TCATCATGTTGGCGTGCCAT 60.681 50.000 15.40 0.00 46.64 4.40
340 342 4.446371 TGGCAATTTCATTTCAAACGGTT 58.554 34.783 0.00 0.00 0.00 4.44
347 349 6.465084 TCAACATGATGGCAATTTCATTTCA 58.535 32.000 0.00 0.00 30.24 2.69
354 356 5.553123 ACACAATCAACATGATGGCAATTT 58.447 33.333 0.00 0.00 37.15 1.82
377 379 2.610976 CGGTGTTCACGGAGTTTCCATA 60.611 50.000 4.84 0.00 41.61 2.74
385 387 2.933495 TCTTATCGGTGTTCACGGAG 57.067 50.000 15.86 5.90 0.00 4.63
398 400 4.367450 GACTCAGTGCACCTCATCTTATC 58.633 47.826 14.63 0.00 0.00 1.75
460 504 8.557864 GGACATCAATAATCTCTCACAAAGATG 58.442 37.037 0.00 0.00 33.78 2.90
461 505 8.270030 TGGACATCAATAATCTCTCACAAAGAT 58.730 33.333 0.00 0.00 34.96 2.40
467 511 6.825721 AGGTTTGGACATCAATAATCTCTCAC 59.174 38.462 0.00 0.00 34.98 3.51
973 1026 2.499685 CCGGAGCTAGGGTTTCGG 59.500 66.667 0.00 0.00 0.00 4.30
993 1046 0.972983 CCGTGGGTCTCATCCTCTGT 60.973 60.000 0.00 0.00 0.00 3.41
1173 1226 3.062466 TCGAGCACCCTCAGGTCG 61.062 66.667 8.30 8.30 46.45 4.79
1296 1349 0.115745 AGTCGGGGTCCTTGGAGTTA 59.884 55.000 0.00 0.00 0.00 2.24
1400 1453 4.669318 AGAAGCAAGCAAATGATGAATCG 58.331 39.130 0.00 0.00 0.00 3.34
1456 1517 4.499865 CCACCTACAGTTCAGATATCGTGG 60.500 50.000 0.00 1.28 0.00 4.94
1580 1653 8.507249 GCAACATTCAGGTCCTAATACATAATC 58.493 37.037 0.00 0.00 0.00 1.75
1583 1656 6.101150 AGGCAACATTCAGGTCCTAATACATA 59.899 38.462 0.00 0.00 41.41 2.29
1584 1657 5.103940 AGGCAACATTCAGGTCCTAATACAT 60.104 40.000 0.00 0.00 41.41 2.29
1587 1660 4.227300 ACAGGCAACATTCAGGTCCTAATA 59.773 41.667 0.00 0.00 41.41 0.98
1608 1681 6.801718 ATACTGCCAATAGTTAGTACCACA 57.198 37.500 0.00 0.00 32.19 4.17
1625 1698 7.095060 CCACATGACATACCAAAGATATACTGC 60.095 40.741 0.00 0.00 0.00 4.40
1641 1717 6.363167 AAAACATTTGATCCCACATGACAT 57.637 33.333 0.00 0.00 34.84 3.06
1680 1756 3.821033 GCAGAACCTGACCAATTACAGTT 59.179 43.478 0.00 0.00 32.44 3.16
1685 1761 2.375174 ACCAGCAGAACCTGACCAATTA 59.625 45.455 0.00 0.00 34.77 1.40
1692 1768 1.071987 CAGCACCAGCAGAACCTGA 59.928 57.895 0.00 0.00 45.49 3.86
1696 1772 2.595463 TGGCAGCACCAGCAGAAC 60.595 61.111 0.00 0.00 46.36 3.01
1732 1808 0.996583 GGGGTCTGGGGTGATTTACA 59.003 55.000 0.00 0.00 0.00 2.41
1733 1809 0.996583 TGGGGTCTGGGGTGATTTAC 59.003 55.000 0.00 0.00 0.00 2.01
1741 1817 4.802051 CATGCGTGGGGTCTGGGG 62.802 72.222 0.00 0.00 0.00 4.96
1742 1818 3.976701 GACATGCGTGGGGTCTGGG 62.977 68.421 11.36 0.00 0.00 4.45
1743 1819 2.436646 GACATGCGTGGGGTCTGG 60.437 66.667 11.36 0.00 0.00 3.86
1744 1820 1.003355 AAGACATGCGTGGGGTCTG 60.003 57.895 11.36 0.00 40.80 3.51
1745 1821 1.296715 GAAGACATGCGTGGGGTCT 59.703 57.895 11.36 1.02 43.35 3.85
1746 1822 1.003839 TGAAGACATGCGTGGGGTC 60.004 57.895 11.36 4.58 0.00 4.46
1754 1830 6.798959 GTGTTTAGACAAATCTGAAGACATGC 59.201 38.462 0.00 0.00 41.66 4.06
1781 1857 4.789012 ACTTGTATTCTTGGCACCATTG 57.211 40.909 0.00 0.00 0.00 2.82
1782 1858 6.909550 TTAACTTGTATTCTTGGCACCATT 57.090 33.333 0.00 0.00 0.00 3.16
1784 1860 6.909550 AATTAACTTGTATTCTTGGCACCA 57.090 33.333 0.00 0.00 0.00 4.17
1816 1892 4.202202 ACCGGCAATTTCTCAAAACATGAA 60.202 37.500 0.00 0.00 37.67 2.57
1856 1932 3.054878 GTTCTGATGCTGTTTTTGGCAG 58.945 45.455 0.00 0.00 41.88 4.85
1990 2070 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
1991 2071 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
1992 2072 5.634020 CCGCTCTTATATTTCTTTACGGAGG 59.366 44.000 0.00 0.00 39.22 4.30
1995 2075 4.989168 AGCCGCTCTTATATTTCTTTACGG 59.011 41.667 0.00 0.00 39.84 4.02
1996 2076 5.462398 ACAGCCGCTCTTATATTTCTTTACG 59.538 40.000 0.00 0.00 0.00 3.18
1997 2077 6.846325 ACAGCCGCTCTTATATTTCTTTAC 57.154 37.500 0.00 0.00 0.00 2.01
1998 2078 7.045416 TGAACAGCCGCTCTTATATTTCTTTA 58.955 34.615 0.00 0.00 0.00 1.85
1999 2079 5.880332 TGAACAGCCGCTCTTATATTTCTTT 59.120 36.000 0.00 0.00 0.00 2.52
2000 2080 5.428253 TGAACAGCCGCTCTTATATTTCTT 58.572 37.500 0.00 0.00 0.00 2.52
2001 2081 5.023533 TGAACAGCCGCTCTTATATTTCT 57.976 39.130 0.00 0.00 0.00 2.52
2002 2082 5.050490 TCTGAACAGCCGCTCTTATATTTC 58.950 41.667 0.00 0.00 0.00 2.17
2003 2083 5.023533 TCTGAACAGCCGCTCTTATATTT 57.976 39.130 0.00 0.00 0.00 1.40
2004 2084 4.672587 TCTGAACAGCCGCTCTTATATT 57.327 40.909 0.00 0.00 0.00 1.28
2005 2085 4.672587 TTCTGAACAGCCGCTCTTATAT 57.327 40.909 0.00 0.00 0.00 0.86
2006 2086 4.181578 GTTTCTGAACAGCCGCTCTTATA 58.818 43.478 0.00 0.00 35.79 0.98
2007 2087 3.003480 GTTTCTGAACAGCCGCTCTTAT 58.997 45.455 0.00 0.00 35.79 1.73
2008 2088 2.224185 TGTTTCTGAACAGCCGCTCTTA 60.224 45.455 0.00 0.00 40.71 2.10
2009 2089 1.230324 GTTTCTGAACAGCCGCTCTT 58.770 50.000 0.00 0.00 35.79 2.85
2010 2090 0.106708 TGTTTCTGAACAGCCGCTCT 59.893 50.000 0.00 0.00 40.71 4.09
2011 2091 2.616969 TGTTTCTGAACAGCCGCTC 58.383 52.632 0.00 0.00 40.71 5.03
2012 2092 4.876701 TGTTTCTGAACAGCCGCT 57.123 50.000 0.00 0.00 40.71 5.52
2212 2292 3.567397 AGTCCCTTATCACAGTATCGCT 58.433 45.455 0.00 0.00 0.00 4.93
2234 2314 9.699410 AAATAAGAAATGTCACATATCCCTCAA 57.301 29.630 0.00 0.00 0.00 3.02
2261 2341 2.225019 CAGTAAACTCTGCAGCCTGTTG 59.775 50.000 9.47 0.00 0.00 3.33
2398 2478 2.032528 GTGGGCACACTGCTGCTA 59.967 61.111 13.14 0.00 44.28 3.49
2566 2646 9.471702 CCTAAGATGGCAAATAGATTAATCCAT 57.528 33.333 11.92 7.03 35.73 3.41
2623 2703 9.793252 GCTCAATATCAAACAAGTCATAATGTT 57.207 29.630 0.00 0.00 41.31 2.71
2746 2826 2.846193 CAGGTTTTCTGGGAAAGACGA 58.154 47.619 0.00 0.00 39.76 4.20
2821 2901 2.999355 CAGACCAGCTTAAGAACAGCTC 59.001 50.000 6.67 0.00 44.77 4.09
2909 3006 5.888161 TGAGAACTGAGATGTACTGCTATCA 59.112 40.000 0.00 0.00 0.00 2.15
3184 3282 7.896496 ACCTACCTAAGATATAGCAGCAGTAAT 59.104 37.037 0.00 0.00 0.00 1.89
3185 3283 7.176865 CACCTACCTAAGATATAGCAGCAGTAA 59.823 40.741 0.00 0.00 0.00 2.24
3192 3290 6.837048 TGACAACACCTACCTAAGATATAGCA 59.163 38.462 0.00 0.00 0.00 3.49
3315 3421 6.218019 GCCGGATGTGTTGTATACTTGTATA 58.782 40.000 5.05 0.00 0.00 1.47
3368 3474 5.006746 AGACTTTTGCGAGGAAATTATAGCG 59.993 40.000 0.00 0.00 0.00 4.26
3410 3516 3.498334 AGTCTAGAAGGGAAACGAGTGT 58.502 45.455 0.00 0.00 0.00 3.55
3416 3522 3.511934 TCTGCAGAGTCTAGAAGGGAAAC 59.488 47.826 13.74 0.00 0.00 2.78
3433 3539 7.953005 TTTATCAAGGTGGAATTATTCTGCA 57.047 32.000 4.87 0.00 0.00 4.41
3571 3679 7.615039 ATCATCAACCTCAACTCTAGATGAT 57.385 36.000 0.00 0.00 43.21 2.45
3761 3875 7.484641 CCTACACACAAATTAAATGATTCCACG 59.515 37.037 0.00 0.00 0.00 4.94
3774 3888 4.927267 TCCTCATCCCTACACACAAATT 57.073 40.909 0.00 0.00 0.00 1.82
3904 4018 7.663905 ACATGTGAAAGCTTATTTAGTGTACCA 59.336 33.333 0.00 0.00 0.00 3.25
3925 4039 4.461081 AGAGAGAGAAGAACGCTTACATGT 59.539 41.667 2.69 2.69 33.61 3.21
3968 4085 6.543465 TCTCAGTAATATTTGGAATGGTGCAG 59.457 38.462 0.00 0.00 0.00 4.41
3987 4104 0.617413 CAAGTGGGCAGGATCTCAGT 59.383 55.000 0.00 0.00 0.00 3.41
4254 4372 6.265422 AGGGTAAAATGGACTCAACTGAAAAG 59.735 38.462 0.00 0.00 0.00 2.27
4255 4373 6.133356 AGGGTAAAATGGACTCAACTGAAAA 58.867 36.000 0.00 0.00 0.00 2.29
4259 4377 5.070001 TCAAGGGTAAAATGGACTCAACTG 58.930 41.667 0.00 0.00 0.00 3.16
4260 4378 5.319043 TCAAGGGTAAAATGGACTCAACT 57.681 39.130 0.00 0.00 0.00 3.16
4261 4379 6.208599 TCAATCAAGGGTAAAATGGACTCAAC 59.791 38.462 0.00 0.00 0.00 3.18
4273 4391 6.414732 CCACAGTAAGATCAATCAAGGGTAA 58.585 40.000 0.00 0.00 0.00 2.85
4280 4398 5.485353 AGAGAACCCACAGTAAGATCAATCA 59.515 40.000 0.00 0.00 0.00 2.57
4288 4406 6.531503 TCATTCTAGAGAACCCACAGTAAG 57.468 41.667 0.00 0.00 36.80 2.34
4446 4879 2.863401 TGTAATCCTCGGTGTCATCG 57.137 50.000 0.00 0.00 0.00 3.84
4491 4924 3.117738 CCCCCATCTGTAGAAGCTGATTT 60.118 47.826 0.00 0.00 0.00 2.17
4587 5020 4.834496 CCTACGGGGGTGTAAAGTGATATA 59.166 45.833 0.00 0.00 0.00 0.86
4593 5026 3.481493 ACCTACGGGGGTGTAAAGT 57.519 52.632 0.75 0.00 38.30 2.66
4602 5035 2.363795 TGCTCCTCACCTACGGGG 60.364 66.667 0.00 0.00 41.89 5.73
4611 5044 4.121669 GCTCGCGTCTGCTCCTCA 62.122 66.667 5.77 0.00 39.65 3.86
4632 5065 3.130633 GGTTTCCCAAAACTTCACATGC 58.869 45.455 0.00 0.00 43.55 4.06
4738 5171 0.184692 TGTTGACAGGATTGGGTGCA 59.815 50.000 0.00 0.00 0.00 4.57
4806 5239 0.732571 CAAATACAATCCAGGCGCGT 59.267 50.000 8.43 0.00 0.00 6.01
4807 5240 0.732571 ACAAATACAATCCAGGCGCG 59.267 50.000 0.00 0.00 0.00 6.86
4819 5252 7.996385 AGGTATGCATTTTCAGGTACAAATAC 58.004 34.615 3.54 0.00 0.00 1.89
4824 5257 7.094118 GGTTAAAGGTATGCATTTTCAGGTACA 60.094 37.037 3.54 0.00 30.75 2.90
4845 5278 7.867921 TCTAATGCTTTCAAGGGATAGGTTAA 58.132 34.615 0.00 0.00 0.00 2.01
4865 5299 6.470456 AAACTTTCTTCCCTCCCTTCTAAT 57.530 37.500 0.00 0.00 0.00 1.73
4915 5359 3.416277 CCAACACTTTATGCAACGATCG 58.584 45.455 14.88 14.88 0.00 3.69
4951 5395 3.503748 GCAATAGCAAACTCTGAGTTGGT 59.496 43.478 22.67 21.13 38.66 3.67
5006 5450 5.395103 ACTTTTACAAGAGCAAATTGCACCA 60.395 36.000 20.82 0.00 38.52 4.17
5014 5458 6.310224 GCAAGACAAACTTTTACAAGAGCAAA 59.690 34.615 0.00 0.00 36.61 3.68
5017 5461 4.740205 GGCAAGACAAACTTTTACAAGAGC 59.260 41.667 0.00 0.00 36.61 4.09
5053 5497 4.079980 TCACTTGTAGCAGCAGGTTTTA 57.920 40.909 0.00 0.00 0.00 1.52
5054 5498 2.930950 TCACTTGTAGCAGCAGGTTTT 58.069 42.857 0.00 0.00 0.00 2.43
5055 5499 2.638480 TCACTTGTAGCAGCAGGTTT 57.362 45.000 0.00 0.00 0.00 3.27
5108 5554 0.772124 AACTCTCCCCTGGCCAAGAA 60.772 55.000 7.01 0.00 0.00 2.52
5139 5586 4.183865 GCACTCACACTGTCAGCAATATA 58.816 43.478 0.00 0.00 0.00 0.86
5190 5688 8.339714 TCGATTCAAAAGAAATAACAGTCGTTT 58.660 29.630 0.00 0.00 36.52 3.60
5201 5699 7.967303 GCAAATCTCTCTCGATTCAAAAGAAAT 59.033 33.333 0.00 0.00 32.69 2.17
5205 5703 6.174451 TGCAAATCTCTCTCGATTCAAAAG 57.826 37.500 0.00 0.00 32.69 2.27
5206 5704 6.372381 TGATGCAAATCTCTCTCGATTCAAAA 59.628 34.615 0.00 0.00 32.69 2.44
5255 5753 4.766891 TGGCTCGAGAAATTTTCCTGAAAT 59.233 37.500 18.75 0.00 39.63 2.17
5256 5754 4.023193 GTGGCTCGAGAAATTTTCCTGAAA 60.023 41.667 18.75 0.00 0.00 2.69
5257 5755 3.502211 GTGGCTCGAGAAATTTTCCTGAA 59.498 43.478 18.75 0.00 0.00 3.02
5258 5756 3.074412 GTGGCTCGAGAAATTTTCCTGA 58.926 45.455 18.75 3.62 0.00 3.86
5259 5757 2.162408 GGTGGCTCGAGAAATTTTCCTG 59.838 50.000 18.75 0.00 0.00 3.86
5260 5758 2.224769 TGGTGGCTCGAGAAATTTTCCT 60.225 45.455 18.75 0.00 0.00 3.36
5261 5759 2.159382 TGGTGGCTCGAGAAATTTTCC 58.841 47.619 18.75 6.31 0.00 3.13
5262 5760 4.035675 CCTATGGTGGCTCGAGAAATTTTC 59.964 45.833 18.75 0.66 0.00 2.29
5270 5768 0.830648 TTTCCCTATGGTGGCTCGAG 59.169 55.000 8.45 8.45 0.00 4.04
5273 5771 0.255890 TGCTTTCCCTATGGTGGCTC 59.744 55.000 0.00 0.00 0.00 4.70
5280 5778 5.449553 ACTATTTCCCTTGCTTTCCCTATG 58.550 41.667 0.00 0.00 0.00 2.23
5302 5800 6.670077 TTGGCTTTGACAAAATTTTGGTAC 57.330 33.333 29.37 20.87 42.34 3.34
5304 5802 6.581171 TTTTGGCTTTGACAAAATTTTGGT 57.419 29.167 29.37 17.55 44.33 3.67
5392 5895 7.543520 CAGCTGAATGACATATAGCTAAATCGA 59.456 37.037 19.95 0.00 42.38 3.59
5393 5896 7.543520 TCAGCTGAATGACATATAGCTAAATCG 59.456 37.037 15.67 11.40 42.38 3.34
5394 5897 8.768957 TCAGCTGAATGACATATAGCTAAATC 57.231 34.615 15.67 0.00 42.38 2.17
5395 5898 9.736414 AATCAGCTGAATGACATATAGCTAAAT 57.264 29.630 22.50 15.19 42.38 1.40
5396 5899 9.565090 AAATCAGCTGAATGACATATAGCTAAA 57.435 29.630 22.50 14.06 42.38 1.85
5397 5900 9.565090 AAAATCAGCTGAATGACATATAGCTAA 57.435 29.630 22.50 11.05 42.38 3.09
5398 5901 9.565090 AAAAATCAGCTGAATGACATATAGCTA 57.435 29.630 22.50 0.00 42.38 3.32
5399 5902 8.461249 AAAAATCAGCTGAATGACATATAGCT 57.539 30.769 22.50 16.51 44.90 3.32
5421 5924 5.584253 TTCGACTGACCCAAAATCAAAAA 57.416 34.783 0.00 0.00 0.00 1.94
5422 5925 5.782893 ATTCGACTGACCCAAAATCAAAA 57.217 34.783 0.00 0.00 0.00 2.44
5423 5926 5.782893 AATTCGACTGACCCAAAATCAAA 57.217 34.783 0.00 0.00 0.00 2.69
5424 5927 5.534654 AGAAATTCGACTGACCCAAAATCAA 59.465 36.000 0.00 0.00 0.00 2.57
5425 5928 5.048782 CAGAAATTCGACTGACCCAAAATCA 60.049 40.000 0.00 0.00 36.38 2.57
5426 5929 5.393962 CAGAAATTCGACTGACCCAAAATC 58.606 41.667 0.00 0.00 36.38 2.17
5427 5930 4.218417 CCAGAAATTCGACTGACCCAAAAT 59.782 41.667 2.52 0.00 36.38 1.82
5428 5931 3.568007 CCAGAAATTCGACTGACCCAAAA 59.432 43.478 2.52 0.00 36.38 2.44
5429 5932 3.146066 CCAGAAATTCGACTGACCCAAA 58.854 45.455 2.52 0.00 36.38 3.28
5430 5933 2.778299 CCAGAAATTCGACTGACCCAA 58.222 47.619 2.52 0.00 36.38 4.12
5431 5934 1.610624 GCCAGAAATTCGACTGACCCA 60.611 52.381 2.52 0.00 36.38 4.51
5432 5935 1.087501 GCCAGAAATTCGACTGACCC 58.912 55.000 2.52 0.00 36.38 4.46
5433 5936 1.734465 CAGCCAGAAATTCGACTGACC 59.266 52.381 2.52 0.00 36.38 4.02
5434 5937 2.417719 ACAGCCAGAAATTCGACTGAC 58.582 47.619 15.96 0.00 36.38 3.51
5435 5938 2.807967 CAACAGCCAGAAATTCGACTGA 59.192 45.455 15.96 0.00 36.38 3.41
5436 5939 2.095567 CCAACAGCCAGAAATTCGACTG 60.096 50.000 10.05 10.05 0.00 3.51
5437 5940 2.154462 CCAACAGCCAGAAATTCGACT 58.846 47.619 0.00 0.00 0.00 4.18
5438 5941 2.151202 TCCAACAGCCAGAAATTCGAC 58.849 47.619 0.00 0.00 0.00 4.20
5439 5942 2.559698 TCCAACAGCCAGAAATTCGA 57.440 45.000 0.00 0.00 0.00 3.71
5440 5943 3.855689 AATCCAACAGCCAGAAATTCG 57.144 42.857 0.00 0.00 0.00 3.34
5441 5944 4.687483 CACAAATCCAACAGCCAGAAATTC 59.313 41.667 0.00 0.00 0.00 2.17
5442 5945 4.634199 CACAAATCCAACAGCCAGAAATT 58.366 39.130 0.00 0.00 0.00 1.82
5443 5946 3.555586 GCACAAATCCAACAGCCAGAAAT 60.556 43.478 0.00 0.00 0.00 2.17
5444 5947 2.224018 GCACAAATCCAACAGCCAGAAA 60.224 45.455 0.00 0.00 0.00 2.52
5445 5948 1.340889 GCACAAATCCAACAGCCAGAA 59.659 47.619 0.00 0.00 0.00 3.02
5446 5949 0.961019 GCACAAATCCAACAGCCAGA 59.039 50.000 0.00 0.00 0.00 3.86
5447 5950 0.963962 AGCACAAATCCAACAGCCAG 59.036 50.000 0.00 0.00 0.00 4.85
5448 5951 1.412079 AAGCACAAATCCAACAGCCA 58.588 45.000 0.00 0.00 0.00 4.75
5449 5952 2.137523 CAAAGCACAAATCCAACAGCC 58.862 47.619 0.00 0.00 0.00 4.85
5450 5953 3.054878 CTCAAAGCACAAATCCAACAGC 58.945 45.455 0.00 0.00 0.00 4.40
5451 5954 4.572985 TCTCAAAGCACAAATCCAACAG 57.427 40.909 0.00 0.00 0.00 3.16
5452 5955 4.341806 ACATCTCAAAGCACAAATCCAACA 59.658 37.500 0.00 0.00 0.00 3.33
5453 5956 4.682860 CACATCTCAAAGCACAAATCCAAC 59.317 41.667 0.00 0.00 0.00 3.77
5454 5957 4.341806 ACACATCTCAAAGCACAAATCCAA 59.658 37.500 0.00 0.00 0.00 3.53
5455 5958 3.890756 ACACATCTCAAAGCACAAATCCA 59.109 39.130 0.00 0.00 0.00 3.41
5456 5959 4.232221 CACACATCTCAAAGCACAAATCC 58.768 43.478 0.00 0.00 0.00 3.01
5457 5960 3.671928 GCACACATCTCAAAGCACAAATC 59.328 43.478 0.00 0.00 0.00 2.17
5458 5961 3.319972 AGCACACATCTCAAAGCACAAAT 59.680 39.130 0.00 0.00 0.00 2.32
5459 5962 2.689471 AGCACACATCTCAAAGCACAAA 59.311 40.909 0.00 0.00 0.00 2.83
5460 5963 2.300433 AGCACACATCTCAAAGCACAA 58.700 42.857 0.00 0.00 0.00 3.33
5461 5964 1.971481 AGCACACATCTCAAAGCACA 58.029 45.000 0.00 0.00 0.00 4.57
5462 5965 3.360249 AAAGCACACATCTCAAAGCAC 57.640 42.857 0.00 0.00 0.00 4.40
5463 5966 4.136796 ACTAAAGCACACATCTCAAAGCA 58.863 39.130 0.00 0.00 0.00 3.91
5464 5967 4.756084 ACTAAAGCACACATCTCAAAGC 57.244 40.909 0.00 0.00 0.00 3.51
5465 5968 7.992180 AAAAACTAAAGCACACATCTCAAAG 57.008 32.000 0.00 0.00 0.00 2.77
5486 5989 8.091449 ACAACACAAAATACAGAACAGGAAAAA 58.909 29.630 0.00 0.00 0.00 1.94
5487 5990 7.543868 CACAACACAAAATACAGAACAGGAAAA 59.456 33.333 0.00 0.00 0.00 2.29
5488 5991 7.032580 CACAACACAAAATACAGAACAGGAAA 58.967 34.615 0.00 0.00 0.00 3.13
5489 5992 6.151985 ACACAACACAAAATACAGAACAGGAA 59.848 34.615 0.00 0.00 0.00 3.36
5490 5993 5.650266 ACACAACACAAAATACAGAACAGGA 59.350 36.000 0.00 0.00 0.00 3.86
5491 5994 5.890334 ACACAACACAAAATACAGAACAGG 58.110 37.500 0.00 0.00 0.00 4.00
5492 5995 6.253298 CCAACACAACACAAAATACAGAACAG 59.747 38.462 0.00 0.00 0.00 3.16
5493 5996 6.096036 CCAACACAACACAAAATACAGAACA 58.904 36.000 0.00 0.00 0.00 3.18
5494 5997 5.518487 CCCAACACAACACAAAATACAGAAC 59.482 40.000 0.00 0.00 0.00 3.01
5495 5998 5.655488 CCCAACACAACACAAAATACAGAA 58.345 37.500 0.00 0.00 0.00 3.02
5496 5999 4.440802 GCCCAACACAACACAAAATACAGA 60.441 41.667 0.00 0.00 0.00 3.41
5497 6000 3.801594 GCCCAACACAACACAAAATACAG 59.198 43.478 0.00 0.00 0.00 2.74
5498 6001 3.430929 GGCCCAACACAACACAAAATACA 60.431 43.478 0.00 0.00 0.00 2.29
5499 6002 3.127589 GGCCCAACACAACACAAAATAC 58.872 45.455 0.00 0.00 0.00 1.89
5500 6003 3.034635 AGGCCCAACACAACACAAAATA 58.965 40.909 0.00 0.00 0.00 1.40
5501 6004 1.836802 AGGCCCAACACAACACAAAAT 59.163 42.857 0.00 0.00 0.00 1.82
5502 6005 1.270907 AGGCCCAACACAACACAAAA 58.729 45.000 0.00 0.00 0.00 2.44
5503 6006 2.028130 CTAGGCCCAACACAACACAAA 58.972 47.619 0.00 0.00 0.00 2.83
5504 6007 1.064314 ACTAGGCCCAACACAACACAA 60.064 47.619 0.00 0.00 0.00 3.33
5505 6008 0.548989 ACTAGGCCCAACACAACACA 59.451 50.000 0.00 0.00 0.00 3.72
5506 6009 1.336755 CAACTAGGCCCAACACAACAC 59.663 52.381 0.00 0.00 0.00 3.32
5507 6010 1.213182 TCAACTAGGCCCAACACAACA 59.787 47.619 0.00 0.00 0.00 3.33
5508 6011 1.975660 TCAACTAGGCCCAACACAAC 58.024 50.000 0.00 0.00 0.00 3.32
5509 6012 2.738587 TTCAACTAGGCCCAACACAA 57.261 45.000 0.00 0.00 0.00 3.33
5510 6013 2.738587 TTTCAACTAGGCCCAACACA 57.261 45.000 0.00 0.00 0.00 3.72
5511 6014 2.161609 CGATTTCAACTAGGCCCAACAC 59.838 50.000 0.00 0.00 0.00 3.32
5512 6015 2.039216 TCGATTTCAACTAGGCCCAACA 59.961 45.455 0.00 0.00 0.00 3.33
5513 6016 2.418976 GTCGATTTCAACTAGGCCCAAC 59.581 50.000 0.00 0.00 0.00 3.77
5514 6017 2.304761 AGTCGATTTCAACTAGGCCCAA 59.695 45.455 0.00 0.00 0.00 4.12
5515 6018 1.906574 AGTCGATTTCAACTAGGCCCA 59.093 47.619 0.00 0.00 0.00 5.36
5516 6019 2.093658 TCAGTCGATTTCAACTAGGCCC 60.094 50.000 0.00 0.00 0.00 5.80
5517 6020 2.930682 GTCAGTCGATTTCAACTAGGCC 59.069 50.000 0.00 0.00 0.00 5.19
5518 6021 2.930682 GGTCAGTCGATTTCAACTAGGC 59.069 50.000 0.00 0.00 0.00 3.93
5519 6022 3.179830 CGGTCAGTCGATTTCAACTAGG 58.820 50.000 0.00 0.00 0.00 3.02
5520 6023 2.599082 GCGGTCAGTCGATTTCAACTAG 59.401 50.000 0.00 0.00 0.00 2.57
5521 6024 2.230508 AGCGGTCAGTCGATTTCAACTA 59.769 45.455 0.00 0.00 0.00 2.24
5522 6025 1.000955 AGCGGTCAGTCGATTTCAACT 59.999 47.619 0.00 0.00 0.00 3.16
5523 6026 1.126846 CAGCGGTCAGTCGATTTCAAC 59.873 52.381 0.00 0.00 0.00 3.18
5524 6027 1.270094 ACAGCGGTCAGTCGATTTCAA 60.270 47.619 0.00 0.00 0.00 2.69
5525 6028 0.317160 ACAGCGGTCAGTCGATTTCA 59.683 50.000 0.00 0.00 0.00 2.69
5526 6029 1.429463 AACAGCGGTCAGTCGATTTC 58.571 50.000 0.00 0.00 0.00 2.17
5527 6030 1.798813 GAAACAGCGGTCAGTCGATTT 59.201 47.619 0.00 0.00 0.00 2.17
5528 6031 1.000955 AGAAACAGCGGTCAGTCGATT 59.999 47.619 0.00 0.00 0.00 3.34
5529 6032 0.603569 AGAAACAGCGGTCAGTCGAT 59.396 50.000 0.00 0.00 0.00 3.59
5530 6033 1.199327 CTAGAAACAGCGGTCAGTCGA 59.801 52.381 0.00 0.00 0.00 4.20
5531 6034 1.068472 ACTAGAAACAGCGGTCAGTCG 60.068 52.381 0.00 0.00 0.00 4.18
5532 6035 2.030185 TGACTAGAAACAGCGGTCAGTC 60.030 50.000 0.00 11.40 33.74 3.51
5533 6036 1.961394 TGACTAGAAACAGCGGTCAGT 59.039 47.619 0.00 0.00 33.74 3.41
5534 6037 2.600731 CTGACTAGAAACAGCGGTCAG 58.399 52.381 0.00 6.95 44.66 3.51
5535 6038 1.961394 ACTGACTAGAAACAGCGGTCA 59.039 47.619 0.00 0.00 37.61 4.02
5536 6039 2.597520 GACTGACTAGAAACAGCGGTC 58.402 52.381 0.00 0.00 37.61 4.79
5537 6040 1.068472 CGACTGACTAGAAACAGCGGT 60.068 52.381 0.00 0.00 37.61 5.68
5538 6041 1.199327 TCGACTGACTAGAAACAGCGG 59.801 52.381 19.44 12.20 37.61 5.52
5539 6042 2.613730 TCGACTGACTAGAAACAGCG 57.386 50.000 0.00 10.57 37.61 5.18
5540 6043 4.090642 CACAATCGACTGACTAGAAACAGC 59.909 45.833 0.00 0.02 37.61 4.40
5541 6044 5.223382 ACACAATCGACTGACTAGAAACAG 58.777 41.667 0.00 5.82 39.65 3.16
5542 6045 5.196341 ACACAATCGACTGACTAGAAACA 57.804 39.130 0.00 0.00 0.00 2.83
5543 6046 8.959058 CATATACACAATCGACTGACTAGAAAC 58.041 37.037 0.00 0.00 0.00 2.78
5544 6047 8.135529 CCATATACACAATCGACTGACTAGAAA 58.864 37.037 0.00 0.00 0.00 2.52
5545 6048 7.255486 CCCATATACACAATCGACTGACTAGAA 60.255 40.741 0.00 0.00 0.00 2.10
5546 6049 6.206829 CCCATATACACAATCGACTGACTAGA 59.793 42.308 0.00 0.00 0.00 2.43
5547 6050 6.382608 CCCATATACACAATCGACTGACTAG 58.617 44.000 0.00 0.00 0.00 2.57
5548 6051 5.278808 GCCCATATACACAATCGACTGACTA 60.279 44.000 0.00 0.00 0.00 2.59
5549 6052 4.501571 GCCCATATACACAATCGACTGACT 60.502 45.833 0.00 0.00 0.00 3.41
5550 6053 3.741344 GCCCATATACACAATCGACTGAC 59.259 47.826 0.00 0.00 0.00 3.51
5551 6054 3.641436 AGCCCATATACACAATCGACTGA 59.359 43.478 0.00 0.00 0.00 3.41
5552 6055 3.990469 GAGCCCATATACACAATCGACTG 59.010 47.826 0.00 0.00 0.00 3.51
5553 6056 3.305403 CGAGCCCATATACACAATCGACT 60.305 47.826 0.00 0.00 0.00 4.18
5554 6057 2.987149 CGAGCCCATATACACAATCGAC 59.013 50.000 0.00 0.00 0.00 4.20
5555 6058 2.609491 GCGAGCCCATATACACAATCGA 60.609 50.000 0.00 0.00 0.00 3.59
5556 6059 1.726791 GCGAGCCCATATACACAATCG 59.273 52.381 0.00 0.00 0.00 3.34
5557 6060 2.738846 CAGCGAGCCCATATACACAATC 59.261 50.000 0.00 0.00 0.00 2.67
5558 6061 2.368548 TCAGCGAGCCCATATACACAAT 59.631 45.455 0.00 0.00 0.00 2.71
5559 6062 1.760029 TCAGCGAGCCCATATACACAA 59.240 47.619 0.00 0.00 0.00 3.33
5560 6063 1.341209 CTCAGCGAGCCCATATACACA 59.659 52.381 0.00 0.00 0.00 3.72
5561 6064 2.071688 CTCAGCGAGCCCATATACAC 57.928 55.000 0.00 0.00 0.00 2.90
5572 6075 4.463879 CCCACCAGGCTCAGCGAG 62.464 72.222 0.00 1.80 0.00 5.03
5576 6079 4.729918 GGCACCCACCAGGCTCAG 62.730 72.222 0.00 0.00 40.58 3.35
5578 6081 4.729918 CAGGCACCCACCAGGCTC 62.730 72.222 0.00 0.00 40.58 4.70
5580 6083 4.603535 AACAGGCACCCACCAGGC 62.604 66.667 0.00 0.00 40.58 4.85
5581 6084 1.457455 AAAACAGGCACCCACCAGG 60.457 57.895 0.00 0.00 43.78 4.45
5582 6085 1.042559 ACAAAACAGGCACCCACCAG 61.043 55.000 0.00 0.00 0.00 4.00
5583 6086 1.000993 ACAAAACAGGCACCCACCA 59.999 52.632 0.00 0.00 0.00 4.17
5584 6087 1.739667 GACAAAACAGGCACCCACC 59.260 57.895 0.00 0.00 0.00 4.61
5585 6088 1.739667 GGACAAAACAGGCACCCAC 59.260 57.895 0.00 0.00 0.00 4.61
5586 6089 1.826054 CGGACAAAACAGGCACCCA 60.826 57.895 0.00 0.00 0.00 4.51
5587 6090 3.039134 CGGACAAAACAGGCACCC 58.961 61.111 0.00 0.00 0.00 4.61
5588 6091 2.335011 GCGGACAAAACAGGCACC 59.665 61.111 0.00 0.00 0.00 5.01
5589 6092 2.335011 GGCGGACAAAACAGGCAC 59.665 61.111 0.00 0.00 0.00 5.01
5590 6093 2.909965 GGGCGGACAAAACAGGCA 60.910 61.111 0.00 0.00 32.99 4.75
5591 6094 4.038080 CGGGCGGACAAAACAGGC 62.038 66.667 0.00 0.00 0.00 4.85
5592 6095 0.885596 TAACGGGCGGACAAAACAGG 60.886 55.000 0.00 0.00 0.00 4.00
5593 6096 0.945813 TTAACGGGCGGACAAAACAG 59.054 50.000 0.00 0.00 0.00 3.16
5594 6097 0.662085 GTTAACGGGCGGACAAAACA 59.338 50.000 0.00 0.00 0.00 2.83
5595 6098 0.662085 TGTTAACGGGCGGACAAAAC 59.338 50.000 0.26 0.00 0.00 2.43
5596 6099 1.267261 CATGTTAACGGGCGGACAAAA 59.733 47.619 0.26 0.00 0.00 2.44
5597 6100 0.875728 CATGTTAACGGGCGGACAAA 59.124 50.000 0.26 0.00 0.00 2.83
5598 6101 1.579084 GCATGTTAACGGGCGGACAA 61.579 55.000 0.26 0.00 0.00 3.18
5599 6102 2.036006 GCATGTTAACGGGCGGACA 61.036 57.895 0.26 0.00 0.00 4.02
5600 6103 2.757056 GGCATGTTAACGGGCGGAC 61.757 63.158 13.16 0.00 0.00 4.79
5601 6104 2.437002 GGCATGTTAACGGGCGGA 60.437 61.111 13.16 0.00 0.00 5.54
5602 6105 2.437716 AGGCATGTTAACGGGCGG 60.438 61.111 14.95 0.00 0.00 6.13
5603 6106 1.429148 GAGAGGCATGTTAACGGGCG 61.429 60.000 14.95 0.00 0.00 6.13
5604 6107 1.429148 CGAGAGGCATGTTAACGGGC 61.429 60.000 13.60 13.60 0.00 6.13
5605 6108 1.429148 GCGAGAGGCATGTTAACGGG 61.429 60.000 0.26 0.00 42.87 5.28
5606 6109 2.006772 GCGAGAGGCATGTTAACGG 58.993 57.895 0.26 0.00 42.87 4.44
5638 6141 4.738998 TTCCATGCGGGGCAGGTG 62.739 66.667 1.47 0.00 43.65 4.00
5639 6142 4.740822 GTTCCATGCGGGGCAGGT 62.741 66.667 1.47 0.00 43.65 4.00
5644 6147 4.169696 TAGCGGTTCCATGCGGGG 62.170 66.667 0.00 0.00 37.22 5.73
5645 6148 2.588877 CTAGCGGTTCCATGCGGG 60.589 66.667 0.00 0.00 35.87 6.13
5646 6149 3.272334 GCTAGCGGTTCCATGCGG 61.272 66.667 0.00 0.00 35.87 5.69
5647 6150 2.511373 TGCTAGCGGTTCCATGCG 60.511 61.111 10.77 0.00 35.87 4.73
5648 6151 2.182842 CCTGCTAGCGGTTCCATGC 61.183 63.158 21.93 0.00 0.00 4.06
5649 6152 2.182842 GCCTGCTAGCGGTTCCATG 61.183 63.158 21.93 6.82 0.00 3.66
5650 6153 1.987807 ATGCCTGCTAGCGGTTCCAT 61.988 55.000 21.93 16.79 34.65 3.41
5651 6154 2.196997 AATGCCTGCTAGCGGTTCCA 62.197 55.000 21.93 15.38 34.65 3.53
5652 6155 1.032114 AAATGCCTGCTAGCGGTTCC 61.032 55.000 21.93 10.43 34.65 3.62
5653 6156 0.378610 GAAATGCCTGCTAGCGGTTC 59.621 55.000 21.93 14.57 34.65 3.62
5654 6157 1.032114 GGAAATGCCTGCTAGCGGTT 61.032 55.000 21.93 9.70 34.65 4.44
5655 6158 1.452108 GGAAATGCCTGCTAGCGGT 60.452 57.895 21.93 2.85 34.65 5.68
5656 6159 1.031571 TTGGAAATGCCTGCTAGCGG 61.032 55.000 17.14 17.14 37.63 5.52
5657 6160 0.379669 CTTGGAAATGCCTGCTAGCG 59.620 55.000 10.77 4.90 37.63 4.26
5658 6161 1.467920 ACTTGGAAATGCCTGCTAGC 58.532 50.000 8.10 8.10 37.63 3.42
5659 6162 3.841643 CAAACTTGGAAATGCCTGCTAG 58.158 45.455 0.00 0.00 37.63 3.42
5660 6163 3.940209 CAAACTTGGAAATGCCTGCTA 57.060 42.857 0.00 0.00 37.63 3.49
5661 6164 2.825861 CAAACTTGGAAATGCCTGCT 57.174 45.000 0.00 0.00 37.63 4.24
5673 6176 2.278854 CAAAACAGGCACCCAAACTTG 58.721 47.619 0.00 0.00 0.00 3.16
5674 6177 1.406751 GCAAAACAGGCACCCAAACTT 60.407 47.619 0.00 0.00 0.00 2.66
5675 6178 0.177836 GCAAAACAGGCACCCAAACT 59.822 50.000 0.00 0.00 0.00 2.66
5676 6179 0.177836 AGCAAAACAGGCACCCAAAC 59.822 50.000 0.00 0.00 0.00 2.93
5677 6180 0.463620 GAGCAAAACAGGCACCCAAA 59.536 50.000 0.00 0.00 0.00 3.28
5678 6181 1.733402 CGAGCAAAACAGGCACCCAA 61.733 55.000 0.00 0.00 0.00 4.12
5679 6182 2.192861 CGAGCAAAACAGGCACCCA 61.193 57.895 0.00 0.00 0.00 4.51
5680 6183 2.644992 CGAGCAAAACAGGCACCC 59.355 61.111 0.00 0.00 0.00 4.61
5681 6184 2.050077 GCGAGCAAAACAGGCACC 60.050 61.111 0.00 0.00 0.00 5.01
5682 6185 0.936297 CAAGCGAGCAAAACAGGCAC 60.936 55.000 0.00 0.00 0.00 5.01
5683 6186 1.359833 CAAGCGAGCAAAACAGGCA 59.640 52.632 0.00 0.00 0.00 4.75
5684 6187 0.249031 AACAAGCGAGCAAAACAGGC 60.249 50.000 0.00 0.00 0.00 4.85
5685 6188 2.208326 AAACAAGCGAGCAAAACAGG 57.792 45.000 0.00 0.00 0.00 4.00
5686 6189 2.923020 ACAAAACAAGCGAGCAAAACAG 59.077 40.909 0.00 0.00 0.00 3.16
5687 6190 2.953020 ACAAAACAAGCGAGCAAAACA 58.047 38.095 0.00 0.00 0.00 2.83
5688 6191 3.366422 TGAACAAAACAAGCGAGCAAAAC 59.634 39.130 0.00 0.00 0.00 2.43
5689 6192 3.579709 TGAACAAAACAAGCGAGCAAAA 58.420 36.364 0.00 0.00 0.00 2.44
5690 6193 3.178267 CTGAACAAAACAAGCGAGCAAA 58.822 40.909 0.00 0.00 0.00 3.68
5691 6194 2.796304 CTGAACAAAACAAGCGAGCAA 58.204 42.857 0.00 0.00 0.00 3.91
5692 6195 1.533756 GCTGAACAAAACAAGCGAGCA 60.534 47.619 0.00 0.00 0.00 4.26
5693 6196 1.123655 GCTGAACAAAACAAGCGAGC 58.876 50.000 0.00 0.00 0.00 5.03
5694 6197 2.473530 TGCTGAACAAAACAAGCGAG 57.526 45.000 0.00 0.00 0.00 5.03
5695 6198 2.929531 TTGCTGAACAAAACAAGCGA 57.070 40.000 0.00 0.00 34.56 4.93
5696 6199 3.114809 TCATTGCTGAACAAAACAAGCG 58.885 40.909 0.00 0.00 42.86 4.68
5697 6200 5.467902 TTTCATTGCTGAACAAAACAAGC 57.532 34.783 0.00 0.00 42.86 4.01
5698 6201 7.010738 ACAGATTTCATTGCTGAACAAAACAAG 59.989 33.333 0.00 0.00 42.86 3.16
5699 6202 6.817641 ACAGATTTCATTGCTGAACAAAACAA 59.182 30.769 0.00 0.00 42.86 2.83
5700 6203 6.339730 ACAGATTTCATTGCTGAACAAAACA 58.660 32.000 0.00 0.00 42.86 2.83
5701 6204 6.833342 ACAGATTTCATTGCTGAACAAAAC 57.167 33.333 0.00 0.00 42.86 2.43
5702 6205 7.846644 AAACAGATTTCATTGCTGAACAAAA 57.153 28.000 0.00 0.00 42.86 2.44
5703 6206 7.676807 GCAAAACAGATTTCATTGCTGAACAAA 60.677 33.333 0.00 0.00 42.86 2.83
5704 6207 6.238157 GCAAAACAGATTTCATTGCTGAACAA 60.238 34.615 0.00 0.00 41.05 2.83
5705 6208 5.234757 GCAAAACAGATTTCATTGCTGAACA 59.765 36.000 0.00 0.00 41.05 3.18
5706 6209 5.673029 GCAAAACAGATTTCATTGCTGAAC 58.327 37.500 0.00 0.00 41.05 3.18
5707 6210 5.910637 GCAAAACAGATTTCATTGCTGAA 57.089 34.783 0.00 0.00 42.24 3.02
5711 6214 4.563061 AGGAGCAAAACAGATTTCATTGC 58.437 39.130 0.00 0.00 45.01 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.