Multiple sequence alignment - TraesCS3B01G448400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G448400 | chr3B | 100.000 | 4024 | 0 | 0 | 1 | 4024 | 689008214 | 689004191 | 0.000000e+00 | 7432.0 |
1 | TraesCS3B01G448400 | chr3B | 82.918 | 2529 | 329 | 54 | 1003 | 3503 | 690430726 | 690433179 | 0.000000e+00 | 2182.0 |
2 | TraesCS3B01G448400 | chr3B | 84.172 | 2028 | 287 | 27 | 1027 | 3039 | 690460141 | 690462149 | 0.000000e+00 | 1936.0 |
3 | TraesCS3B01G448400 | chr3B | 83.794 | 2024 | 299 | 23 | 1019 | 3032 | 690447157 | 690449161 | 0.000000e+00 | 1893.0 |
4 | TraesCS3B01G448400 | chr3B | 80.324 | 2404 | 388 | 55 | 1020 | 3377 | 642215299 | 642212935 | 0.000000e+00 | 1740.0 |
5 | TraesCS3B01G448400 | chr3B | 81.448 | 2183 | 345 | 38 | 1021 | 3179 | 690443066 | 690445212 | 0.000000e+00 | 1733.0 |
6 | TraesCS3B01G448400 | chr3B | 79.047 | 2057 | 391 | 33 | 1020 | 3052 | 43527417 | 43525377 | 0.000000e+00 | 1375.0 |
7 | TraesCS3B01G448400 | chr3B | 93.445 | 656 | 16 | 8 | 3182 | 3837 | 642223542 | 642222914 | 0.000000e+00 | 948.0 |
8 | TraesCS3B01G448400 | chr3B | 96.316 | 190 | 7 | 0 | 3835 | 4024 | 461613611 | 461613800 | 3.020000e-81 | 313.0 |
9 | TraesCS3B01G448400 | chr3B | 88.797 | 241 | 19 | 4 | 252 | 484 | 690417263 | 690417503 | 5.090000e-74 | 289.0 |
10 | TraesCS3B01G448400 | chr3B | 83.333 | 228 | 31 | 5 | 3284 | 3511 | 690445410 | 690445630 | 1.900000e-48 | 204.0 |
11 | TraesCS3B01G448400 | chr3B | 92.647 | 68 | 5 | 0 | 891 | 958 | 642215556 | 642215489 | 9.200000e-17 | 99.0 |
12 | TraesCS3B01G448400 | chr3B | 88.060 | 67 | 3 | 1 | 338 | 399 | 689007719 | 689007653 | 1.550000e-09 | 75.0 |
13 | TraesCS3B01G448400 | chr3B | 88.060 | 67 | 3 | 1 | 496 | 562 | 689007877 | 689007816 | 1.550000e-09 | 75.0 |
14 | TraesCS3B01G448400 | chrUn | 84.002 | 2394 | 326 | 30 | 1239 | 3609 | 342677752 | 342680111 | 0.000000e+00 | 2246.0 |
15 | TraesCS3B01G448400 | chrUn | 85.750 | 2028 | 256 | 30 | 1019 | 3032 | 330561340 | 330563348 | 0.000000e+00 | 2113.0 |
16 | TraesCS3B01G448400 | chrUn | 88.539 | 1396 | 129 | 12 | 2224 | 3609 | 405666919 | 405668293 | 0.000000e+00 | 1663.0 |
17 | TraesCS3B01G448400 | chrUn | 88.860 | 386 | 24 | 11 | 496 | 866 | 466583177 | 466583558 | 1.320000e-124 | 457.0 |
18 | TraesCS3B01G448400 | chrUn | 88.889 | 234 | 13 | 3 | 3617 | 3837 | 405966974 | 405966741 | 3.960000e-70 | 276.0 |
19 | TraesCS3B01G448400 | chrUn | 82.540 | 315 | 33 | 14 | 3036 | 3331 | 353196070 | 353196381 | 1.430000e-64 | 257.0 |
20 | TraesCS3B01G448400 | chrUn | 89.372 | 207 | 18 | 2 | 1 | 206 | 466582932 | 466583135 | 1.430000e-64 | 257.0 |
21 | TraesCS3B01G448400 | chrUn | 82.540 | 315 | 33 | 14 | 3036 | 3331 | 471390039 | 471389728 | 1.430000e-64 | 257.0 |
22 | TraesCS3B01G448400 | chrUn | 84.058 | 207 | 26 | 7 | 1019 | 1223 | 454389946 | 454389745 | 4.100000e-45 | 193.0 |
23 | TraesCS3B01G448400 | chrUn | 77.778 | 279 | 56 | 5 | 1031 | 1306 | 475133528 | 475133253 | 2.490000e-37 | 167.0 |
24 | TraesCS3B01G448400 | chrUn | 82.877 | 146 | 14 | 6 | 815 | 957 | 330561016 | 330561153 | 1.960000e-23 | 121.0 |
25 | TraesCS3B01G448400 | chrUn | 82.192 | 146 | 15 | 6 | 815 | 957 | 454390270 | 454390133 | 9.140000e-22 | 115.0 |
26 | TraesCS3B01G448400 | chrUn | 85.870 | 92 | 8 | 3 | 313 | 399 | 466583152 | 466583243 | 4.280000e-15 | 93.5 |
27 | TraesCS3B01G448400 | chr3A | 82.407 | 2518 | 359 | 49 | 1003 | 3482 | 658303796 | 658306267 | 0.000000e+00 | 2119.0 |
28 | TraesCS3B01G448400 | chr3A | 82.481 | 2346 | 353 | 38 | 1020 | 3331 | 658289305 | 658291626 | 0.000000e+00 | 2002.0 |
29 | TraesCS3B01G448400 | chr3A | 79.679 | 2057 | 380 | 31 | 1019 | 3052 | 36071075 | 36069034 | 0.000000e+00 | 1448.0 |
30 | TraesCS3B01G448400 | chr3A | 92.381 | 210 | 13 | 3 | 3818 | 4024 | 378336960 | 378337169 | 3.040000e-76 | 296.0 |
31 | TraesCS3B01G448400 | chr3A | 94.690 | 113 | 6 | 0 | 863 | 975 | 658303528 | 658303640 | 4.130000e-40 | 176.0 |
32 | TraesCS3B01G448400 | chr3A | 93.913 | 115 | 7 | 0 | 1 | 115 | 658302381 | 658302495 | 1.490000e-39 | 174.0 |
33 | TraesCS3B01G448400 | chr3A | 85.616 | 146 | 10 | 7 | 743 | 880 | 658300268 | 658300410 | 4.190000e-30 | 143.0 |
34 | TraesCS3B01G448400 | chr3A | 87.255 | 102 | 13 | 0 | 389 | 490 | 53566343 | 53566444 | 2.540000e-22 | 117.0 |
35 | TraesCS3B01G448400 | chr3D | 80.542 | 2508 | 401 | 57 | 1011 | 3478 | 523334820 | 523337280 | 0.000000e+00 | 1847.0 |
36 | TraesCS3B01G448400 | chr3D | 81.327 | 2185 | 350 | 38 | 1019 | 3189 | 523555579 | 523557719 | 0.000000e+00 | 1722.0 |
37 | TraesCS3B01G448400 | chr3D | 80.912 | 2216 | 385 | 28 | 1024 | 3224 | 523408130 | 523410322 | 0.000000e+00 | 1714.0 |
38 | TraesCS3B01G448400 | chr3D | 82.050 | 2000 | 327 | 26 | 1019 | 3002 | 523569833 | 523571816 | 0.000000e+00 | 1676.0 |
39 | TraesCS3B01G448400 | chr3D | 81.852 | 1609 | 247 | 31 | 1020 | 2612 | 523379705 | 523381284 | 0.000000e+00 | 1312.0 |
40 | TraesCS3B01G448400 | chr3D | 80.519 | 1350 | 227 | 26 | 1022 | 2360 | 523560423 | 523561747 | 0.000000e+00 | 1003.0 |
41 | TraesCS3B01G448400 | chr3D | 82.206 | 399 | 46 | 15 | 3414 | 3792 | 523557926 | 523558319 | 1.800000e-83 | 320.0 |
42 | TraesCS3B01G448400 | chr3D | 79.715 | 281 | 37 | 10 | 713 | 984 | 523559987 | 523560256 | 6.870000e-43 | 185.0 |
43 | TraesCS3B01G448400 | chr3D | 78.173 | 197 | 25 | 6 | 209 | 395 | 523554776 | 523554964 | 4.250000e-20 | 110.0 |
44 | TraesCS3B01G448400 | chr3D | 92.647 | 68 | 5 | 0 | 891 | 958 | 523334572 | 523334639 | 9.200000e-17 | 99.0 |
45 | TraesCS3B01G448400 | chr3D | 100.000 | 29 | 0 | 0 | 3221 | 3249 | 523410337 | 523410365 | 2.000000e-03 | 54.7 |
46 | TraesCS3B01G448400 | chr5B | 97.396 | 192 | 4 | 1 | 3834 | 4024 | 75208205 | 75208396 | 3.880000e-85 | 326.0 |
47 | TraesCS3B01G448400 | chr5B | 97.326 | 187 | 5 | 0 | 3838 | 4024 | 664880869 | 664881055 | 6.490000e-83 | 318.0 |
48 | TraesCS3B01G448400 | chr5B | 96.257 | 187 | 7 | 0 | 3838 | 4024 | 682192187 | 682192001 | 1.400000e-79 | 307.0 |
49 | TraesCS3B01G448400 | chr5B | 90.000 | 90 | 9 | 0 | 395 | 484 | 350412014 | 350411925 | 2.540000e-22 | 117.0 |
50 | TraesCS3B01G448400 | chr2B | 95.288 | 191 | 9 | 0 | 3834 | 4024 | 233588134 | 233587944 | 1.820000e-78 | 303.0 |
51 | TraesCS3B01G448400 | chr2B | 95.263 | 190 | 9 | 0 | 3835 | 4024 | 123110052 | 123109863 | 6.540000e-78 | 302.0 |
52 | TraesCS3B01G448400 | chr2B | 95.745 | 188 | 7 | 1 | 3838 | 4024 | 750057075 | 750056888 | 6.540000e-78 | 302.0 |
53 | TraesCS3B01G448400 | chr2B | 90.909 | 88 | 8 | 0 | 393 | 480 | 501319068 | 501318981 | 7.060000e-23 | 119.0 |
54 | TraesCS3B01G448400 | chr2B | 87.755 | 98 | 12 | 0 | 393 | 490 | 744854600 | 744854697 | 9.140000e-22 | 115.0 |
55 | TraesCS3B01G448400 | chr6A | 93.467 | 199 | 11 | 2 | 3828 | 4024 | 565161927 | 565161729 | 1.090000e-75 | 294.0 |
56 | TraesCS3B01G448400 | chr7D | 88.660 | 97 | 10 | 1 | 395 | 490 | 55414244 | 55414148 | 2.540000e-22 | 117.0 |
57 | TraesCS3B01G448400 | chr1B | 88.660 | 97 | 8 | 3 | 395 | 490 | 188913768 | 188913674 | 9.140000e-22 | 115.0 |
58 | TraesCS3B01G448400 | chr4A | 90.588 | 85 | 8 | 0 | 406 | 490 | 47750331 | 47750247 | 3.290000e-21 | 113.0 |
59 | TraesCS3B01G448400 | chr1D | 88.298 | 94 | 9 | 2 | 398 | 490 | 124919534 | 124919442 | 1.180000e-20 | 111.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G448400 | chr3B | 689004191 | 689008214 | 4023 | True | 2527.333333 | 7432 | 92.040000 | 1 | 4024 | 3 | chr3B.!!$R4 | 4023 |
1 | TraesCS3B01G448400 | chr3B | 690430726 | 690433179 | 2453 | False | 2182.000000 | 2182 | 82.918000 | 1003 | 3503 | 1 | chr3B.!!$F3 | 2500 |
2 | TraesCS3B01G448400 | chr3B | 690460141 | 690462149 | 2008 | False | 1936.000000 | 1936 | 84.172000 | 1027 | 3039 | 1 | chr3B.!!$F4 | 2012 |
3 | TraesCS3B01G448400 | chr3B | 43525377 | 43527417 | 2040 | True | 1375.000000 | 1375 | 79.047000 | 1020 | 3052 | 1 | chr3B.!!$R1 | 2032 |
4 | TraesCS3B01G448400 | chr3B | 690443066 | 690449161 | 6095 | False | 1276.666667 | 1893 | 82.858333 | 1019 | 3511 | 3 | chr3B.!!$F5 | 2492 |
5 | TraesCS3B01G448400 | chr3B | 642222914 | 642223542 | 628 | True | 948.000000 | 948 | 93.445000 | 3182 | 3837 | 1 | chr3B.!!$R2 | 655 |
6 | TraesCS3B01G448400 | chr3B | 642212935 | 642215556 | 2621 | True | 919.500000 | 1740 | 86.485500 | 891 | 3377 | 2 | chr3B.!!$R3 | 2486 |
7 | TraesCS3B01G448400 | chrUn | 342677752 | 342680111 | 2359 | False | 2246.000000 | 2246 | 84.002000 | 1239 | 3609 | 1 | chrUn.!!$F1 | 2370 |
8 | TraesCS3B01G448400 | chrUn | 405666919 | 405668293 | 1374 | False | 1663.000000 | 1663 | 88.539000 | 2224 | 3609 | 1 | chrUn.!!$F3 | 1385 |
9 | TraesCS3B01G448400 | chrUn | 330561016 | 330563348 | 2332 | False | 1117.000000 | 2113 | 84.313500 | 815 | 3032 | 2 | chrUn.!!$F4 | 2217 |
10 | TraesCS3B01G448400 | chrUn | 466582932 | 466583558 | 626 | False | 269.166667 | 457 | 88.034000 | 1 | 866 | 3 | chrUn.!!$F5 | 865 |
11 | TraesCS3B01G448400 | chr3A | 658289305 | 658291626 | 2321 | False | 2002.000000 | 2002 | 82.481000 | 1020 | 3331 | 1 | chr3A.!!$F3 | 2311 |
12 | TraesCS3B01G448400 | chr3A | 36069034 | 36071075 | 2041 | True | 1448.000000 | 1448 | 79.679000 | 1019 | 3052 | 1 | chr3A.!!$R1 | 2033 |
13 | TraesCS3B01G448400 | chr3A | 658300268 | 658306267 | 5999 | False | 653.000000 | 2119 | 89.156500 | 1 | 3482 | 4 | chr3A.!!$F4 | 3481 |
14 | TraesCS3B01G448400 | chr3D | 523569833 | 523571816 | 1983 | False | 1676.000000 | 1676 | 82.050000 | 1019 | 3002 | 1 | chr3D.!!$F2 | 1983 |
15 | TraesCS3B01G448400 | chr3D | 523379705 | 523381284 | 1579 | False | 1312.000000 | 1312 | 81.852000 | 1020 | 2612 | 1 | chr3D.!!$F1 | 1592 |
16 | TraesCS3B01G448400 | chr3D | 523334572 | 523337280 | 2708 | False | 973.000000 | 1847 | 86.594500 | 891 | 3478 | 2 | chr3D.!!$F3 | 2587 |
17 | TraesCS3B01G448400 | chr3D | 523408130 | 523410365 | 2235 | False | 884.350000 | 1714 | 90.456000 | 1024 | 3249 | 2 | chr3D.!!$F4 | 2225 |
18 | TraesCS3B01G448400 | chr3D | 523554776 | 523561747 | 6971 | False | 668.000000 | 1722 | 80.388000 | 209 | 3792 | 5 | chr3D.!!$F5 | 3583 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
826 | 3472 | 0.171007 | GTAATGAACGGACGGACGGA | 59.829 | 55.0 | 6.00 | 0.0 | 38.39 | 4.69 | F |
2335 | 9271 | 0.111061 | ACTGGCATGGCAGAACAGAA | 59.889 | 50.0 | 44.89 | 13.4 | 33.57 | 3.02 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2537 | 9491 | 1.757118 | TCTTCCGGAATACAGCCTGAG | 59.243 | 52.381 | 19.21 | 1.19 | 0.0 | 3.35 | R |
3892 | 10977 | 0.039256 | CGTGGCAAAATGAGTGGTGG | 60.039 | 55.000 | 0.00 | 0.00 | 0.0 | 4.61 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
30 | 2144 | 3.159298 | CAGGCGAACTGGTATTGCT | 57.841 | 52.632 | 0.00 | 0.00 | 43.70 | 3.91 |
71 | 2185 | 1.559682 | TGCTTACTTGTCTCCCCATCC | 59.440 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
88 | 2202 | 8.934023 | TCCCCATCCACTTCAATATATTTTAC | 57.066 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
101 | 2215 | 9.489084 | TCAATATATTTTACGGATCTTGACCAG | 57.511 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
112 | 2226 | 3.795688 | TCTTGACCAGCAGGAGAATTT | 57.204 | 42.857 | 0.35 | 0.00 | 38.69 | 1.82 |
113 | 2227 | 3.415212 | TCTTGACCAGCAGGAGAATTTG | 58.585 | 45.455 | 0.35 | 0.00 | 38.69 | 2.32 |
114 | 2228 | 2.957402 | TGACCAGCAGGAGAATTTGT | 57.043 | 45.000 | 0.35 | 0.00 | 38.69 | 2.83 |
123 | 2237 | 3.735746 | GCAGGAGAATTTGTTGTTTTCCG | 59.264 | 43.478 | 0.00 | 0.00 | 35.59 | 4.30 |
130 | 2244 | 8.026607 | GGAGAATTTGTTGTTTTCCGATTATCA | 58.973 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
193 | 2308 | 7.172361 | TGTTTTTAATGCTAATGCCCTTTTGTC | 59.828 | 33.333 | 0.00 | 0.00 | 38.71 | 3.18 |
194 | 2309 | 5.991933 | TTAATGCTAATGCCCTTTTGTCA | 57.008 | 34.783 | 0.00 | 0.00 | 38.71 | 3.58 |
200 | 2746 | 4.379499 | GCTAATGCCCTTTTGTCACACTAC | 60.379 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
206 | 2752 | 4.261801 | CCCTTTTGTCACACTACCTATGG | 58.738 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
207 | 2753 | 4.263331 | CCCTTTTGTCACACTACCTATGGT | 60.263 | 45.833 | 0.00 | 0.00 | 40.16 | 3.55 |
214 | 2798 | 7.247456 | TGTCACACTACCTATGGTCATTTTA | 57.753 | 36.000 | 0.00 | 0.00 | 37.09 | 1.52 |
224 | 2808 | 7.463431 | ACCTATGGTCATTTTACAGTACCAAA | 58.537 | 34.615 | 0.00 | 0.00 | 43.10 | 3.28 |
287 | 2879 | 7.928167 | AGCTATTTTTCTCCTTTTTGTCCTTTG | 59.072 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
296 | 2888 | 4.432712 | CTTTTTGTCCTTTGTTCTGTGGG | 58.567 | 43.478 | 0.00 | 0.00 | 0.00 | 4.61 |
300 | 2892 | 0.257328 | TCCTTTGTTCTGTGGGCACA | 59.743 | 50.000 | 0.00 | 0.00 | 39.32 | 4.57 |
303 | 2895 | 0.459489 | TTTGTTCTGTGGGCACAAGC | 59.541 | 50.000 | 0.00 | 0.00 | 41.33 | 4.01 |
305 | 2897 | 2.594303 | TTCTGTGGGCACAAGCGG | 60.594 | 61.111 | 0.00 | 0.00 | 41.33 | 5.52 |
353 | 2947 | 0.637195 | AGGAGGCTAGGAGCAAGGTA | 59.363 | 55.000 | 0.21 | 0.00 | 44.75 | 3.08 |
354 | 2948 | 1.044611 | GGAGGCTAGGAGCAAGGTAG | 58.955 | 60.000 | 0.21 | 0.00 | 44.75 | 3.18 |
360 | 2958 | 2.432510 | GCTAGGAGCAAGGTAGTCATGT | 59.567 | 50.000 | 0.00 | 0.00 | 41.89 | 3.21 |
365 | 2963 | 6.352016 | AGGAGCAAGGTAGTCATGTATATG | 57.648 | 41.667 | 0.00 | 0.00 | 35.57 | 1.78 |
366 | 2964 | 5.247110 | AGGAGCAAGGTAGTCATGTATATGG | 59.753 | 44.000 | 0.00 | 0.00 | 34.97 | 2.74 |
367 | 2965 | 5.246203 | GGAGCAAGGTAGTCATGTATATGGA | 59.754 | 44.000 | 0.00 | 0.00 | 34.97 | 3.41 |
368 | 2966 | 6.239600 | GGAGCAAGGTAGTCATGTATATGGAA | 60.240 | 42.308 | 0.00 | 0.00 | 34.97 | 3.53 |
389 | 2987 | 6.945435 | TGGAATTGGTAGCTTATTGTCTTCAA | 59.055 | 34.615 | 0.00 | 0.00 | 37.98 | 2.69 |
396 | 2994 | 9.542462 | TGGTAGCTTATTGTCTTCAACATATAC | 57.458 | 33.333 | 0.00 | 0.00 | 37.82 | 1.47 |
399 | 2997 | 8.894768 | AGCTTATTGTCTTCAACATATACTCC | 57.105 | 34.615 | 0.00 | 0.00 | 37.82 | 3.85 |
400 | 2998 | 7.934120 | AGCTTATTGTCTTCAACATATACTCCC | 59.066 | 37.037 | 0.00 | 0.00 | 37.82 | 4.30 |
402 | 3000 | 9.482627 | CTTATTGTCTTCAACATATACTCCCTC | 57.517 | 37.037 | 0.00 | 0.00 | 37.82 | 4.30 |
404 | 3002 | 7.496346 | TTGTCTTCAACATATACTCCCTCTT | 57.504 | 36.000 | 0.00 | 0.00 | 37.82 | 2.85 |
406 | 3004 | 7.918076 | TGTCTTCAACATATACTCCCTCTTTT | 58.082 | 34.615 | 0.00 | 0.00 | 31.20 | 2.27 |
407 | 3005 | 8.041323 | TGTCTTCAACATATACTCCCTCTTTTC | 58.959 | 37.037 | 0.00 | 0.00 | 31.20 | 2.29 |
409 | 3007 | 7.403231 | TCTTCAACATATACTCCCTCTTTTCCT | 59.597 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
412 | 3010 | 9.053472 | TCAACATATACTCCCTCTTTTCCTAAA | 57.947 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
413 | 3011 | 9.853177 | CAACATATACTCCCTCTTTTCCTAAAT | 57.147 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
415 | 3013 | 9.004231 | ACATATACTCCCTCTTTTCCTAAATGT | 57.996 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
419 | 3017 | 7.331089 | ACTCCCTCTTTTCCTAAATGTAAGT | 57.669 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
420 | 3018 | 7.395617 | ACTCCCTCTTTTCCTAAATGTAAGTC | 58.604 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
421 | 3019 | 7.017254 | ACTCCCTCTTTTCCTAAATGTAAGTCA | 59.983 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
422 | 3020 | 7.928873 | TCCCTCTTTTCCTAAATGTAAGTCAT | 58.071 | 34.615 | 0.00 | 0.00 | 38.57 | 3.06 |
452 | 3050 | 9.179909 | AGAGATTCCAATATAGACTACATACGG | 57.820 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
453 | 3051 | 9.175312 | GAGATTCCAATATAGACTACATACGGA | 57.825 | 37.037 | 0.00 | 0.00 | 0.00 | 4.69 |
454 | 3052 | 9.529823 | AGATTCCAATATAGACTACATACGGAA | 57.470 | 33.333 | 6.91 | 6.91 | 31.94 | 4.30 |
455 | 3053 | 9.570488 | GATTCCAATATAGACTACATACGGAAC | 57.430 | 37.037 | 6.68 | 0.79 | 30.97 | 3.62 |
456 | 3054 | 8.467963 | TTCCAATATAGACTACATACGGAACA | 57.532 | 34.615 | 2.00 | 0.00 | 0.00 | 3.18 |
457 | 3055 | 8.467963 | TCCAATATAGACTACATACGGAACAA | 57.532 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
458 | 3056 | 8.916062 | TCCAATATAGACTACATACGGAACAAA | 58.084 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
459 | 3057 | 8.975439 | CCAATATAGACTACATACGGAACAAAC | 58.025 | 37.037 | 0.00 | 0.00 | 0.00 | 2.93 |
460 | 3058 | 9.745880 | CAATATAGACTACATACGGAACAAACT | 57.254 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
461 | 3059 | 9.745880 | AATATAGACTACATACGGAACAAACTG | 57.254 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
462 | 3060 | 5.717078 | AGACTACATACGGAACAAACTGA | 57.283 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
463 | 3061 | 5.710984 | AGACTACATACGGAACAAACTGAG | 58.289 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
464 | 3062 | 5.243283 | AGACTACATACGGAACAAACTGAGT | 59.757 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
465 | 3063 | 6.432162 | AGACTACATACGGAACAAACTGAGTA | 59.568 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
466 | 3064 | 6.985117 | ACTACATACGGAACAAACTGAGTAA | 58.015 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
467 | 3065 | 7.436118 | ACTACATACGGAACAAACTGAGTAAA | 58.564 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
468 | 3066 | 8.092687 | ACTACATACGGAACAAACTGAGTAAAT | 58.907 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
469 | 3067 | 7.360575 | ACATACGGAACAAACTGAGTAAATC | 57.639 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
470 | 3068 | 7.159372 | ACATACGGAACAAACTGAGTAAATCT | 58.841 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
471 | 3069 | 8.308931 | ACATACGGAACAAACTGAGTAAATCTA | 58.691 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
472 | 3070 | 8.592998 | CATACGGAACAAACTGAGTAAATCTAC | 58.407 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
473 | 3071 | 6.518493 | ACGGAACAAACTGAGTAAATCTACA | 58.482 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
474 | 3072 | 6.645415 | ACGGAACAAACTGAGTAAATCTACAG | 59.355 | 38.462 | 0.00 | 0.00 | 36.58 | 2.74 |
475 | 3073 | 6.645415 | CGGAACAAACTGAGTAAATCTACAGT | 59.355 | 38.462 | 0.00 | 0.00 | 43.92 | 3.55 |
476 | 3074 | 7.148787 | CGGAACAAACTGAGTAAATCTACAGTC | 60.149 | 40.741 | 0.00 | 0.00 | 41.73 | 3.51 |
477 | 3075 | 7.873505 | GGAACAAACTGAGTAAATCTACAGTCT | 59.126 | 37.037 | 0.00 | 0.00 | 41.73 | 3.24 |
478 | 3076 | 9.909644 | GAACAAACTGAGTAAATCTACAGTCTA | 57.090 | 33.333 | 0.00 | 0.00 | 41.73 | 2.59 |
498 | 3096 | 9.557338 | CAGTCTAAAATATGACTACGTATAGGC | 57.443 | 37.037 | 0.00 | 0.00 | 41.06 | 3.93 |
499 | 3097 | 9.517868 | AGTCTAAAATATGACTACGTATAGGCT | 57.482 | 33.333 | 0.00 | 0.00 | 41.19 | 4.58 |
503 | 3101 | 8.874744 | AAAATATGACTACGTATAGGCTAGGA | 57.125 | 34.615 | 0.00 | 0.00 | 37.34 | 2.94 |
504 | 3102 | 8.508883 | AAATATGACTACGTATAGGCTAGGAG | 57.491 | 38.462 | 0.00 | 0.00 | 37.34 | 3.69 |
505 | 3103 | 3.672808 | TGACTACGTATAGGCTAGGAGC | 58.327 | 50.000 | 0.00 | 0.00 | 37.34 | 4.70 |
506 | 3104 | 3.072038 | TGACTACGTATAGGCTAGGAGCA | 59.928 | 47.826 | 0.00 | 0.00 | 44.75 | 4.26 |
507 | 3105 | 4.070716 | GACTACGTATAGGCTAGGAGCAA | 58.929 | 47.826 | 0.00 | 0.00 | 44.75 | 3.91 |
508 | 3106 | 4.073549 | ACTACGTATAGGCTAGGAGCAAG | 58.926 | 47.826 | 0.00 | 0.00 | 44.75 | 4.01 |
509 | 3107 | 2.240279 | ACGTATAGGCTAGGAGCAAGG | 58.760 | 52.381 | 0.00 | 0.00 | 44.75 | 3.61 |
510 | 3108 | 2.240279 | CGTATAGGCTAGGAGCAAGGT | 58.760 | 52.381 | 0.00 | 0.00 | 44.75 | 3.50 |
511 | 3109 | 2.628657 | CGTATAGGCTAGGAGCAAGGTT | 59.371 | 50.000 | 0.00 | 0.00 | 44.75 | 3.50 |
512 | 3110 | 3.305471 | CGTATAGGCTAGGAGCAAGGTTC | 60.305 | 52.174 | 0.00 | 0.00 | 44.75 | 3.62 |
513 | 3111 | 2.552093 | TAGGCTAGGAGCAAGGTTCT | 57.448 | 50.000 | 0.21 | 0.00 | 44.75 | 3.01 |
517 | 3115 | 3.198853 | AGGCTAGGAGCAAGGTTCTTAAG | 59.801 | 47.826 | 0.00 | 0.00 | 44.75 | 1.85 |
525 | 3123 | 3.008049 | AGCAAGGTTCTTAAGTCGTGGAT | 59.992 | 43.478 | 1.63 | 0.00 | 0.00 | 3.41 |
538 | 3136 | 5.215252 | AGTCGTGGATATGGAATTGGTAG | 57.785 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
593 | 3196 | 7.827819 | ATCAATATATTGGGTGATACGTTCG | 57.172 | 36.000 | 22.31 | 0.00 | 38.30 | 3.95 |
705 | 3319 | 6.017440 | TGCAGTTTATAGTTTCCTGTTGTCAC | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
706 | 3320 | 6.590357 | CAGTTTATAGTTTCCTGTTGTCACG | 58.410 | 40.000 | 0.00 | 0.00 | 0.00 | 4.35 |
765 | 3403 | 2.164422 | TCTGAACTGAGAGTACGCCATG | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
767 | 3405 | 2.263077 | GAACTGAGAGTACGCCATGTG | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
805 | 3443 | 2.289195 | TGTTAACCACGAGATCCACCAC | 60.289 | 50.000 | 2.48 | 0.00 | 0.00 | 4.16 |
806 | 3444 | 1.933021 | TAACCACGAGATCCACCACT | 58.067 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
807 | 3445 | 0.321671 | AACCACGAGATCCACCACTG | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
808 | 3446 | 0.832135 | ACCACGAGATCCACCACTGT | 60.832 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
810 | 3448 | 1.548719 | CCACGAGATCCACCACTGTAA | 59.451 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
811 | 3449 | 2.168521 | CCACGAGATCCACCACTGTAAT | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
812 | 3450 | 3.190079 | CACGAGATCCACCACTGTAATG | 58.810 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
826 | 3472 | 0.171007 | GTAATGAACGGACGGACGGA | 59.829 | 55.000 | 6.00 | 0.00 | 38.39 | 4.69 |
853 | 3551 | 3.665173 | GCTCGTTCAGAGGCTTTATTG | 57.335 | 47.619 | 0.00 | 0.00 | 46.91 | 1.90 |
854 | 3552 | 3.003480 | GCTCGTTCAGAGGCTTTATTGT | 58.997 | 45.455 | 0.00 | 0.00 | 46.91 | 2.71 |
933 | 3638 | 6.556495 | TCTCCATTCTGTATGCTTTCTCCTAT | 59.444 | 38.462 | 0.00 | 0.00 | 32.60 | 2.57 |
960 | 3665 | 5.832060 | TCTTACACTTACCTCCTACTATGCC | 59.168 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
991 | 3713 | 1.678101 | GGTGTGAAGCTGAAGCACTTT | 59.322 | 47.619 | 4.90 | 0.00 | 45.16 | 2.66 |
992 | 3714 | 2.542411 | GGTGTGAAGCTGAAGCACTTTG | 60.542 | 50.000 | 4.90 | 0.00 | 45.16 | 2.77 |
1028 | 3861 | 4.997905 | TCATTTTCGAAGCAAGTCTGAG | 57.002 | 40.909 | 0.00 | 0.00 | 0.00 | 3.35 |
1075 | 3908 | 1.075659 | GCCTTTCCCCAGCTGAAGT | 59.924 | 57.895 | 17.39 | 0.00 | 0.00 | 3.01 |
1076 | 3909 | 0.540597 | GCCTTTCCCCAGCTGAAGTT | 60.541 | 55.000 | 17.39 | 0.00 | 0.00 | 2.66 |
1154 | 3987 | 2.696707 | TGACGAGTTTGGTCAGGTTAGT | 59.303 | 45.455 | 0.00 | 0.00 | 39.36 | 2.24 |
1230 | 4063 | 1.137404 | GCACCTTGCTGTATTGCGG | 59.863 | 57.895 | 0.00 | 0.00 | 40.96 | 5.69 |
1253 | 4086 | 1.115326 | ACCTTTTTGGGGCTCAGTGC | 61.115 | 55.000 | 0.00 | 0.00 | 41.11 | 4.40 |
1270 | 4103 | 2.435586 | CCACGCTGCCTGAAGAGG | 60.436 | 66.667 | 0.00 | 0.00 | 43.19 | 3.69 |
1285 | 4118 | 5.080969 | TGAAGAGGTAGGTAATTTGACGG | 57.919 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
1445 | 4284 | 0.399454 | ACAGAGCTGCAGACCATGTT | 59.601 | 50.000 | 20.43 | 0.00 | 0.00 | 2.71 |
1542 | 4381 | 4.081642 | GTGTCTACAAATCAGCTGGTAGGA | 60.082 | 45.833 | 20.79 | 6.16 | 35.18 | 2.94 |
1573 | 4412 | 0.179062 | CGAGCTTGGGAATAGCAGCT | 60.179 | 55.000 | 0.00 | 0.00 | 45.48 | 4.24 |
1579 | 4418 | 1.583556 | TGGGAATAGCAGCTTCCTGA | 58.416 | 50.000 | 12.17 | 0.00 | 41.77 | 3.86 |
1581 | 4420 | 2.308570 | TGGGAATAGCAGCTTCCTGAAA | 59.691 | 45.455 | 12.17 | 0.00 | 41.77 | 2.69 |
1582 | 4421 | 3.053395 | TGGGAATAGCAGCTTCCTGAAAT | 60.053 | 43.478 | 12.17 | 0.00 | 41.77 | 2.17 |
1584 | 4423 | 4.202090 | GGGAATAGCAGCTTCCTGAAATTG | 60.202 | 45.833 | 12.17 | 0.00 | 41.77 | 2.32 |
1586 | 4425 | 1.553706 | AGCAGCTTCCTGAAATTGGG | 58.446 | 50.000 | 0.00 | 0.00 | 41.77 | 4.12 |
1588 | 4427 | 0.171903 | CAGCTTCCTGAAATTGGGCG | 59.828 | 55.000 | 0.00 | 0.00 | 41.77 | 6.13 |
1590 | 4429 | 0.965363 | GCTTCCTGAAATTGGGCGGA | 60.965 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
1593 | 4432 | 3.287222 | CTTCCTGAAATTGGGCGGAATA | 58.713 | 45.455 | 0.00 | 0.00 | 33.66 | 1.75 |
1594 | 4433 | 3.374042 | TCCTGAAATTGGGCGGAATAA | 57.626 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
1595 | 4434 | 3.287222 | TCCTGAAATTGGGCGGAATAAG | 58.713 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
1596 | 4435 | 2.223805 | CCTGAAATTGGGCGGAATAAGC | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
1597 | 4436 | 1.403679 | TGAAATTGGGCGGAATAAGCG | 59.596 | 47.619 | 0.00 | 0.00 | 35.00 | 4.68 |
1598 | 4437 | 1.404035 | GAAATTGGGCGGAATAAGCGT | 59.596 | 47.619 | 0.00 | 0.00 | 35.00 | 5.07 |
1599 | 4438 | 2.335316 | AATTGGGCGGAATAAGCGTA | 57.665 | 45.000 | 0.00 | 0.00 | 35.00 | 4.42 |
1600 | 4439 | 1.878953 | ATTGGGCGGAATAAGCGTAG | 58.121 | 50.000 | 0.00 | 0.00 | 35.00 | 3.51 |
1693 | 8621 | 5.300286 | GCTGAATACAATGGATTTACTGGCT | 59.700 | 40.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1698 | 8626 | 7.716799 | ATACAATGGATTTACTGGCTTTCAA | 57.283 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1775 | 8703 | 1.747355 | CATTGTTGCAGAGCTAAGGGG | 59.253 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
1777 | 8705 | 1.002134 | GTTGCAGAGCTAAGGGGCA | 60.002 | 57.895 | 0.00 | 0.00 | 34.17 | 5.36 |
1778 | 8706 | 0.394899 | GTTGCAGAGCTAAGGGGCAT | 60.395 | 55.000 | 0.00 | 0.00 | 34.03 | 4.40 |
1808 | 8742 | 0.464870 | CATCCAGGAGAGCTGACCAG | 59.535 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1895 | 8830 | 8.076178 | CCTTTGAACTGTACTGATTTAAACCTG | 58.924 | 37.037 | 6.77 | 0.00 | 0.00 | 4.00 |
2066 | 9001 | 6.669631 | ACTCCTACCCAATAACCATTTTAGG | 58.330 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2240 | 9176 | 6.409704 | CATCATACCCCACCAGATATTACAG | 58.590 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2331 | 9267 | 3.874392 | ATTTTACTGGCATGGCAGAAC | 57.126 | 42.857 | 44.89 | 6.74 | 0.00 | 3.01 |
2333 | 9269 | 1.825090 | TTACTGGCATGGCAGAACAG | 58.175 | 50.000 | 44.89 | 26.05 | 35.40 | 3.16 |
2334 | 9270 | 0.983467 | TACTGGCATGGCAGAACAGA | 59.017 | 50.000 | 44.89 | 25.37 | 33.57 | 3.41 |
2335 | 9271 | 0.111061 | ACTGGCATGGCAGAACAGAA | 59.889 | 50.000 | 44.89 | 13.40 | 33.57 | 3.02 |
2337 | 9273 | 1.614903 | CTGGCATGGCAGAACAGAAAA | 59.385 | 47.619 | 38.55 | 5.93 | 0.00 | 2.29 |
2377 | 9322 | 3.738282 | CCTGATCGCAGTAGTTATCAAGC | 59.262 | 47.826 | 0.00 | 0.00 | 40.63 | 4.01 |
2379 | 9324 | 4.948847 | TGATCGCAGTAGTTATCAAGCAT | 58.051 | 39.130 | 0.00 | 0.00 | 0.00 | 3.79 |
2576 | 9530 | 6.461092 | CGGAAGACATTGGCAATCTAGTACTA | 60.461 | 42.308 | 10.36 | 1.89 | 0.00 | 1.82 |
3042 | 10006 | 5.648178 | ATGATGAAGTGCATTGCTTGTTA | 57.352 | 34.783 | 10.49 | 0.00 | 37.34 | 2.41 |
3067 | 10033 | 2.817901 | AGTAATGTTGTATCGCGTCCC | 58.182 | 47.619 | 5.77 | 0.00 | 0.00 | 4.46 |
3113 | 10089 | 5.118729 | TCCTTTCCTTTGTTAGTTGGACA | 57.881 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
3120 | 10096 | 4.202010 | CCTTTGTTAGTTGGACAGTTGGTG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.17 |
3121 | 10097 | 2.294074 | TGTTAGTTGGACAGTTGGTGC | 58.706 | 47.619 | 0.00 | 0.00 | 38.51 | 5.01 |
3124 | 10100 | 4.131596 | GTTAGTTGGACAGTTGGTGCTAA | 58.868 | 43.478 | 0.00 | 0.00 | 38.87 | 3.09 |
3126 | 10102 | 3.626930 | AGTTGGACAGTTGGTGCTAAAA | 58.373 | 40.909 | 0.00 | 0.00 | 38.87 | 1.52 |
3135 | 10111 | 4.275936 | CAGTTGGTGCTAAAAGTACTTGCT | 59.724 | 41.667 | 9.34 | 2.24 | 31.18 | 3.91 |
3180 | 10173 | 0.602905 | GTGGCGCTGAAACCTACTGT | 60.603 | 55.000 | 7.64 | 0.00 | 0.00 | 3.55 |
3301 | 10347 | 1.952296 | ACTTGCTGTTTTGAGCTCCTG | 59.048 | 47.619 | 12.15 | 0.70 | 39.90 | 3.86 |
3345 | 10392 | 5.044179 | AGTTCCTGGATAAATGTGGGAATGA | 60.044 | 40.000 | 0.00 | 0.00 | 35.68 | 2.57 |
3399 | 10446 | 2.698803 | TGAATGTCAATCAGTGGGTCG | 58.301 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
3459 | 10506 | 2.200067 | TGTCAATTTTGCTGGTTTGCG | 58.800 | 42.857 | 0.00 | 0.00 | 35.36 | 4.85 |
3612 | 10659 | 4.063998 | TGAGCATAGCATCTGAAACGAT | 57.936 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
3828 | 10913 | 3.592427 | AGTGTACAGAGTCTCCTTCCCTA | 59.408 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
3837 | 10922 | 7.093245 | ACAGAGTCTCCTTCCCTATTACTTTTC | 60.093 | 40.741 | 0.00 | 0.00 | 0.00 | 2.29 |
3838 | 10923 | 6.097129 | AGAGTCTCCTTCCCTATTACTTTTCG | 59.903 | 42.308 | 0.00 | 0.00 | 0.00 | 3.46 |
3839 | 10924 | 5.128991 | AGTCTCCTTCCCTATTACTTTTCGG | 59.871 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3840 | 10925 | 5.128335 | GTCTCCTTCCCTATTACTTTTCGGA | 59.872 | 44.000 | 0.00 | 0.00 | 0.00 | 4.55 |
3842 | 10927 | 6.214005 | TCTCCTTCCCTATTACTTTTCGGAAA | 59.786 | 38.462 | 0.00 | 0.00 | 0.00 | 3.13 |
3843 | 10928 | 6.965607 | TCCTTCCCTATTACTTTTCGGAAAT | 58.034 | 36.000 | 3.67 | 0.00 | 0.00 | 2.17 |
3844 | 10929 | 6.826741 | TCCTTCCCTATTACTTTTCGGAAATG | 59.173 | 38.462 | 13.09 | 13.09 | 0.00 | 2.32 |
3845 | 10930 | 6.602009 | CCTTCCCTATTACTTTTCGGAAATGT | 59.398 | 38.462 | 21.05 | 21.05 | 33.85 | 2.71 |
3846 | 10931 | 7.122204 | CCTTCCCTATTACTTTTCGGAAATGTT | 59.878 | 37.037 | 22.06 | 11.37 | 32.00 | 2.71 |
3849 | 10934 | 8.949177 | TCCCTATTACTTTTCGGAAATGTTAAC | 58.051 | 33.333 | 22.06 | 0.00 | 32.00 | 2.01 |
3850 | 10935 | 7.906527 | CCCTATTACTTTTCGGAAATGTTAACG | 59.093 | 37.037 | 22.06 | 11.36 | 32.00 | 3.18 |
3851 | 10936 | 7.427318 | CCTATTACTTTTCGGAAATGTTAACGC | 59.573 | 37.037 | 22.06 | 0.00 | 32.00 | 4.84 |
3852 | 10937 | 3.892522 | ACTTTTCGGAAATGTTAACGCC | 58.107 | 40.909 | 14.21 | 0.00 | 0.00 | 5.68 |
3853 | 10938 | 2.993449 | TTTCGGAAATGTTAACGCCC | 57.007 | 45.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3854 | 10939 | 1.893544 | TTCGGAAATGTTAACGCCCA | 58.106 | 45.000 | 0.26 | 0.00 | 0.00 | 5.36 |
3855 | 10940 | 1.158434 | TCGGAAATGTTAACGCCCAC | 58.842 | 50.000 | 0.26 | 0.00 | 0.00 | 4.61 |
3856 | 10941 | 0.875728 | CGGAAATGTTAACGCCCACA | 59.124 | 50.000 | 0.26 | 0.00 | 0.00 | 4.17 |
3857 | 10942 | 1.400500 | CGGAAATGTTAACGCCCACAC | 60.400 | 52.381 | 0.26 | 0.00 | 0.00 | 3.82 |
3858 | 10943 | 1.068125 | GGAAATGTTAACGCCCACACC | 60.068 | 52.381 | 0.26 | 0.00 | 0.00 | 4.16 |
3859 | 10944 | 0.963225 | AAATGTTAACGCCCACACCC | 59.037 | 50.000 | 0.26 | 0.00 | 0.00 | 4.61 |
3862 | 10947 | 2.280933 | TTAACGCCCACACCCGTG | 60.281 | 61.111 | 0.00 | 0.00 | 43.21 | 4.94 |
3870 | 10955 | 3.959975 | CACACCCGTGGGCGTTTG | 61.960 | 66.667 | 4.41 | 0.00 | 39.64 | 2.93 |
3876 | 10961 | 2.480555 | CGTGGGCGTTTGCAGATC | 59.519 | 61.111 | 0.00 | 0.00 | 45.35 | 2.75 |
3877 | 10962 | 2.480555 | GTGGGCGTTTGCAGATCG | 59.519 | 61.111 | 0.00 | 0.00 | 45.35 | 3.69 |
3881 | 10966 | 3.430862 | GCGTTTGCAGATCGCCCA | 61.431 | 61.111 | 17.10 | 0.00 | 43.41 | 5.36 |
3882 | 10967 | 2.480555 | CGTTTGCAGATCGCCCAC | 59.519 | 61.111 | 7.00 | 3.64 | 41.33 | 4.61 |
3883 | 10968 | 2.324330 | CGTTTGCAGATCGCCCACA | 61.324 | 57.895 | 7.00 | 0.00 | 41.33 | 4.17 |
3884 | 10969 | 1.210155 | GTTTGCAGATCGCCCACAC | 59.790 | 57.895 | 7.00 | 0.00 | 41.33 | 3.82 |
3888 | 10973 | 4.457496 | CAGATCGCCCACACGCCT | 62.457 | 66.667 | 0.00 | 0.00 | 0.00 | 5.52 |
3889 | 10974 | 4.148825 | AGATCGCCCACACGCCTC | 62.149 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
3902 | 10987 | 4.101448 | GCCTCCGCCACCACTCAT | 62.101 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3903 | 10988 | 2.671070 | CCTCCGCCACCACTCATT | 59.329 | 61.111 | 0.00 | 0.00 | 0.00 | 2.57 |
3904 | 10989 | 1.002134 | CCTCCGCCACCACTCATTT | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 2.32 |
3905 | 10990 | 0.609131 | CCTCCGCCACCACTCATTTT | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3906 | 10991 | 0.523072 | CTCCGCCACCACTCATTTTG | 59.477 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
3907 | 10992 | 1.080569 | CCGCCACCACTCATTTTGC | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 3.68 |
3908 | 10993 | 1.080569 | CGCCACCACTCATTTTGCC | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 4.52 |
3909 | 10994 | 1.804396 | CGCCACCACTCATTTTGCCA | 61.804 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
3910 | 10995 | 0.319813 | GCCACCACTCATTTTGCCAC | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
3911 | 10996 | 0.039256 | CCACCACTCATTTTGCCACG | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
3912 | 10997 | 0.667993 | CACCACTCATTTTGCCACGT | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
3914 | 10999 | 2.487762 | CACCACTCATTTTGCCACGTAT | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
3915 | 11000 | 2.487762 | ACCACTCATTTTGCCACGTATG | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
3917 | 11002 | 3.190327 | CCACTCATTTTGCCACGTATGAA | 59.810 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3920 | 11005 | 5.965334 | CACTCATTTTGCCACGTATGAATAC | 59.035 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3922 | 11007 | 6.318648 | ACTCATTTTGCCACGTATGAATACAT | 59.681 | 34.615 | 0.00 | 0.00 | 40.16 | 2.29 |
3923 | 11008 | 6.493978 | TCATTTTGCCACGTATGAATACATG | 58.506 | 36.000 | 0.00 | 0.00 | 37.87 | 3.21 |
3924 | 11009 | 6.317391 | TCATTTTGCCACGTATGAATACATGA | 59.683 | 34.615 | 0.00 | 0.00 | 37.87 | 3.07 |
3927 | 11012 | 4.702831 | TGCCACGTATGAATACATGACAT | 58.297 | 39.130 | 0.00 | 2.44 | 37.87 | 3.06 |
3928 | 11013 | 4.749598 | TGCCACGTATGAATACATGACATC | 59.250 | 41.667 | 0.00 | 0.00 | 37.87 | 3.06 |
3929 | 11014 | 4.749598 | GCCACGTATGAATACATGACATCA | 59.250 | 41.667 | 0.00 | 0.27 | 37.87 | 3.07 |
3931 | 11016 | 5.107337 | CCACGTATGAATACATGACATCAGC | 60.107 | 44.000 | 0.00 | 0.00 | 37.87 | 4.26 |
3932 | 11017 | 5.463061 | CACGTATGAATACATGACATCAGCA | 59.537 | 40.000 | 0.00 | 0.00 | 37.87 | 4.41 |
3933 | 11018 | 5.693555 | ACGTATGAATACATGACATCAGCAG | 59.306 | 40.000 | 0.00 | 0.00 | 37.87 | 4.24 |
3934 | 11019 | 5.922544 | CGTATGAATACATGACATCAGCAGA | 59.077 | 40.000 | 0.00 | 0.00 | 37.87 | 4.26 |
3935 | 11020 | 6.421801 | CGTATGAATACATGACATCAGCAGAA | 59.578 | 38.462 | 0.00 | 0.00 | 37.87 | 3.02 |
3936 | 11021 | 7.042523 | CGTATGAATACATGACATCAGCAGAAA | 60.043 | 37.037 | 0.00 | 0.00 | 37.87 | 2.52 |
3938 | 11023 | 7.255491 | TGAATACATGACATCAGCAGAAATC | 57.745 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3939 | 11024 | 7.052248 | TGAATACATGACATCAGCAGAAATCT | 58.948 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
3940 | 11025 | 7.555195 | TGAATACATGACATCAGCAGAAATCTT | 59.445 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
3944 | 11029 | 6.866770 | ACATGACATCAGCAGAAATCTTTTTG | 59.133 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
3945 | 11030 | 5.775686 | TGACATCAGCAGAAATCTTTTTGG | 58.224 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
3946 | 11031 | 5.302568 | TGACATCAGCAGAAATCTTTTTGGT | 59.697 | 36.000 | 0.00 | 0.00 | 33.95 | 3.67 |
3948 | 11033 | 6.585416 | ACATCAGCAGAAATCTTTTTGGTTT | 58.415 | 32.000 | 0.00 | 0.00 | 31.72 | 3.27 |
3951 | 11036 | 7.306205 | TCAGCAGAAATCTTTTTGGTTTTTG | 57.694 | 32.000 | 0.00 | 0.00 | 31.72 | 2.44 |
3952 | 11037 | 6.315891 | TCAGCAGAAATCTTTTTGGTTTTTGG | 59.684 | 34.615 | 0.00 | 0.00 | 31.72 | 3.28 |
3953 | 11038 | 5.066375 | AGCAGAAATCTTTTTGGTTTTTGGC | 59.934 | 36.000 | 0.00 | 0.00 | 30.12 | 4.52 |
3954 | 11039 | 5.066375 | GCAGAAATCTTTTTGGTTTTTGGCT | 59.934 | 36.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3957 | 11042 | 8.672815 | CAGAAATCTTTTTGGTTTTTGGCTTAA | 58.327 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
3959 | 11044 | 9.847706 | GAAATCTTTTTGGTTTTTGGCTTAAAA | 57.152 | 25.926 | 0.00 | 0.00 | 36.51 | 1.52 |
3962 | 11047 | 9.800433 | ATCTTTTTGGTTTTTGGCTTAAAAATG | 57.200 | 25.926 | 12.79 | 0.00 | 46.56 | 2.32 |
3963 | 11048 | 8.797438 | TCTTTTTGGTTTTTGGCTTAAAAATGT | 58.203 | 25.926 | 12.79 | 0.00 | 46.56 | 2.71 |
3964 | 11049 | 9.416794 | CTTTTTGGTTTTTGGCTTAAAAATGTT | 57.583 | 25.926 | 12.79 | 0.00 | 46.56 | 2.71 |
3965 | 11050 | 9.764363 | TTTTTGGTTTTTGGCTTAAAAATGTTT | 57.236 | 22.222 | 12.79 | 0.00 | 46.56 | 2.83 |
4005 | 11090 | 8.989653 | AAAAGTGAACTAAAAATCCGTTTTCA | 57.010 | 26.923 | 0.00 | 0.00 | 40.07 | 2.69 |
4006 | 11091 | 7.980742 | AAGTGAACTAAAAATCCGTTTTCAC | 57.019 | 32.000 | 0.00 | 0.00 | 40.07 | 3.18 |
4007 | 11092 | 6.500910 | AGTGAACTAAAAATCCGTTTTCACC | 58.499 | 36.000 | 7.71 | 0.00 | 40.07 | 4.02 |
4008 | 11093 | 6.095720 | AGTGAACTAAAAATCCGTTTTCACCA | 59.904 | 34.615 | 7.71 | 0.00 | 40.07 | 4.17 |
4009 | 11094 | 6.921307 | GTGAACTAAAAATCCGTTTTCACCAT | 59.079 | 34.615 | 0.00 | 0.00 | 40.07 | 3.55 |
4010 | 11095 | 7.436970 | GTGAACTAAAAATCCGTTTTCACCATT | 59.563 | 33.333 | 0.00 | 0.00 | 40.07 | 3.16 |
4011 | 11096 | 8.630917 | TGAACTAAAAATCCGTTTTCACCATTA | 58.369 | 29.630 | 0.00 | 0.00 | 40.07 | 1.90 |
4012 | 11097 | 9.465985 | GAACTAAAAATCCGTTTTCACCATTAA | 57.534 | 29.630 | 0.00 | 0.00 | 40.07 | 1.40 |
4016 | 11101 | 7.899178 | AAAATCCGTTTTCACCATTAAATCC | 57.101 | 32.000 | 0.00 | 0.00 | 32.14 | 3.01 |
4017 | 11102 | 4.688511 | TCCGTTTTCACCATTAAATCCG | 57.311 | 40.909 | 0.00 | 0.00 | 0.00 | 4.18 |
4020 | 11105 | 4.155280 | CCGTTTTCACCATTAAATCCGTCT | 59.845 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
4021 | 11106 | 5.321516 | CGTTTTCACCATTAAATCCGTCTC | 58.678 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
4022 | 11107 | 5.321516 | GTTTTCACCATTAAATCCGTCTCG | 58.678 | 41.667 | 0.00 | 0.00 | 0.00 | 4.04 |
4023 | 11108 | 4.459390 | TTCACCATTAAATCCGTCTCGA | 57.541 | 40.909 | 0.00 | 0.00 | 0.00 | 4.04 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
16 | 2130 | 2.987413 | TTGCAAGCAATACCAGTTCG | 57.013 | 45.000 | 2.89 | 0.00 | 0.00 | 3.95 |
23 | 2137 | 6.532657 | AGCAGTGATTTATTTGCAAGCAATAC | 59.467 | 34.615 | 8.46 | 0.00 | 38.97 | 1.89 |
30 | 2144 | 4.925054 | GCAGAAGCAGTGATTTATTTGCAA | 59.075 | 37.500 | 12.72 | 0.00 | 41.58 | 4.08 |
88 | 2202 | 0.179089 | CTCCTGCTGGTCAAGATCCG | 60.179 | 60.000 | 9.73 | 0.00 | 34.23 | 4.18 |
101 | 2215 | 3.735746 | CGGAAAACAACAAATTCTCCTGC | 59.264 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
112 | 2226 | 8.105097 | TGATCTTTGATAATCGGAAAACAACA | 57.895 | 30.769 | 0.00 | 0.00 | 0.00 | 3.33 |
113 | 2227 | 8.964420 | TTGATCTTTGATAATCGGAAAACAAC | 57.036 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
193 | 2308 | 7.103641 | ACTGTAAAATGACCATAGGTAGTGTG | 58.896 | 38.462 | 0.00 | 0.00 | 35.25 | 3.82 |
194 | 2309 | 7.253905 | ACTGTAAAATGACCATAGGTAGTGT | 57.746 | 36.000 | 0.00 | 0.00 | 35.25 | 3.55 |
200 | 2746 | 7.931578 | TTTGGTACTGTAAAATGACCATAGG | 57.068 | 36.000 | 0.00 | 0.00 | 39.83 | 2.57 |
214 | 2798 | 7.754851 | ACTTCCGAAAAATATTTGGTACTGT | 57.245 | 32.000 | 0.39 | 0.00 | 0.00 | 3.55 |
264 | 2856 | 9.594478 | GAACAAAGGACAAAAAGGAGAAAAATA | 57.406 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
270 | 2862 | 5.125417 | CACAGAACAAAGGACAAAAAGGAGA | 59.875 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
287 | 2879 | 2.639286 | CGCTTGTGCCCACAGAAC | 59.361 | 61.111 | 1.02 | 0.00 | 42.94 | 3.01 |
296 | 2888 | 4.060038 | ATTGGCAGCCGCTTGTGC | 62.060 | 61.111 | 7.03 | 0.00 | 38.60 | 4.57 |
300 | 2892 | 3.072486 | GCATCATTGGCAGCCGCTT | 62.072 | 57.895 | 7.03 | 0.00 | 38.60 | 4.68 |
320 | 2914 | 1.813477 | GCCTCCTAGAGCAGCAATTCC | 60.813 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
353 | 2947 | 7.321717 | AGCTACCAATTCCATATACATGACT | 57.678 | 36.000 | 0.00 | 0.00 | 33.67 | 3.41 |
354 | 2948 | 7.986085 | AAGCTACCAATTCCATATACATGAC | 57.014 | 36.000 | 0.00 | 0.00 | 33.67 | 3.06 |
365 | 2963 | 7.094377 | TGTTGAAGACAATAAGCTACCAATTCC | 60.094 | 37.037 | 0.00 | 0.00 | 38.32 | 3.01 |
366 | 2964 | 7.816640 | TGTTGAAGACAATAAGCTACCAATTC | 58.183 | 34.615 | 0.00 | 0.00 | 38.32 | 2.17 |
367 | 2965 | 7.759489 | TGTTGAAGACAATAAGCTACCAATT | 57.241 | 32.000 | 0.00 | 0.00 | 38.32 | 2.32 |
368 | 2966 | 7.944729 | ATGTTGAAGACAATAAGCTACCAAT | 57.055 | 32.000 | 0.00 | 0.00 | 42.62 | 3.16 |
389 | 2987 | 9.004231 | ACATTTAGGAAAAGAGGGAGTATATGT | 57.996 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
395 | 2993 | 7.017254 | TGACTTACATTTAGGAAAAGAGGGAGT | 59.983 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
396 | 2994 | 7.394816 | TGACTTACATTTAGGAAAAGAGGGAG | 58.605 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
398 | 2996 | 8.581253 | AATGACTTACATTTAGGAAAAGAGGG | 57.419 | 34.615 | 0.00 | 0.00 | 45.60 | 4.30 |
426 | 3024 | 9.179909 | CCGTATGTAGTCTATATTGGAATCTCT | 57.820 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
427 | 3025 | 9.175312 | TCCGTATGTAGTCTATATTGGAATCTC | 57.825 | 37.037 | 7.43 | 0.00 | 0.00 | 2.75 |
428 | 3026 | 9.529823 | TTCCGTATGTAGTCTATATTGGAATCT | 57.470 | 33.333 | 14.08 | 0.00 | 29.76 | 2.40 |
429 | 3027 | 9.570488 | GTTCCGTATGTAGTCTATATTGGAATC | 57.430 | 37.037 | 18.01 | 12.02 | 33.69 | 2.52 |
430 | 3028 | 9.085645 | TGTTCCGTATGTAGTCTATATTGGAAT | 57.914 | 33.333 | 18.01 | 0.00 | 33.69 | 3.01 |
431 | 3029 | 8.467963 | TGTTCCGTATGTAGTCTATATTGGAA | 57.532 | 34.615 | 14.08 | 14.08 | 31.05 | 3.53 |
432 | 3030 | 8.467963 | TTGTTCCGTATGTAGTCTATATTGGA | 57.532 | 34.615 | 6.31 | 6.31 | 0.00 | 3.53 |
433 | 3031 | 8.975439 | GTTTGTTCCGTATGTAGTCTATATTGG | 58.025 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
434 | 3032 | 9.745880 | AGTTTGTTCCGTATGTAGTCTATATTG | 57.254 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
435 | 3033 | 9.745880 | CAGTTTGTTCCGTATGTAGTCTATATT | 57.254 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
436 | 3034 | 9.128404 | TCAGTTTGTTCCGTATGTAGTCTATAT | 57.872 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
437 | 3035 | 8.510243 | TCAGTTTGTTCCGTATGTAGTCTATA | 57.490 | 34.615 | 0.00 | 0.00 | 0.00 | 1.31 |
438 | 3036 | 7.122353 | ACTCAGTTTGTTCCGTATGTAGTCTAT | 59.878 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
439 | 3037 | 6.432162 | ACTCAGTTTGTTCCGTATGTAGTCTA | 59.568 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
440 | 3038 | 5.243283 | ACTCAGTTTGTTCCGTATGTAGTCT | 59.757 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
441 | 3039 | 5.467705 | ACTCAGTTTGTTCCGTATGTAGTC | 58.532 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
442 | 3040 | 5.464030 | ACTCAGTTTGTTCCGTATGTAGT | 57.536 | 39.130 | 0.00 | 0.00 | 0.00 | 2.73 |
443 | 3041 | 7.878477 | TTTACTCAGTTTGTTCCGTATGTAG | 57.122 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
444 | 3042 | 8.308931 | AGATTTACTCAGTTTGTTCCGTATGTA | 58.691 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
445 | 3043 | 7.159372 | AGATTTACTCAGTTTGTTCCGTATGT | 58.841 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
446 | 3044 | 7.596749 | AGATTTACTCAGTTTGTTCCGTATG | 57.403 | 36.000 | 0.00 | 0.00 | 0.00 | 2.39 |
447 | 3045 | 8.308931 | TGTAGATTTACTCAGTTTGTTCCGTAT | 58.691 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
448 | 3046 | 7.660112 | TGTAGATTTACTCAGTTTGTTCCGTA | 58.340 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
449 | 3047 | 6.518493 | TGTAGATTTACTCAGTTTGTTCCGT | 58.482 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
450 | 3048 | 6.645415 | ACTGTAGATTTACTCAGTTTGTTCCG | 59.355 | 38.462 | 0.00 | 0.00 | 35.29 | 4.30 |
451 | 3049 | 7.873505 | AGACTGTAGATTTACTCAGTTTGTTCC | 59.126 | 37.037 | 0.00 | 0.00 | 37.23 | 3.62 |
452 | 3050 | 8.819643 | AGACTGTAGATTTACTCAGTTTGTTC | 57.180 | 34.615 | 0.00 | 0.00 | 37.23 | 3.18 |
472 | 3070 | 9.557338 | GCCTATACGTAGTCATATTTTAGACTG | 57.443 | 37.037 | 0.08 | 0.00 | 44.32 | 3.51 |
473 | 3071 | 9.517868 | AGCCTATACGTAGTCATATTTTAGACT | 57.482 | 33.333 | 0.08 | 0.00 | 43.93 | 3.24 |
477 | 3075 | 9.964354 | TCCTAGCCTATACGTAGTCATATTTTA | 57.036 | 33.333 | 0.08 | 0.00 | 43.93 | 1.52 |
478 | 3076 | 8.874744 | TCCTAGCCTATACGTAGTCATATTTT | 57.125 | 34.615 | 0.08 | 0.00 | 43.93 | 1.82 |
479 | 3077 | 7.067251 | GCTCCTAGCCTATACGTAGTCATATTT | 59.933 | 40.741 | 0.08 | 0.00 | 37.29 | 1.40 |
480 | 3078 | 6.543100 | GCTCCTAGCCTATACGTAGTCATATT | 59.457 | 42.308 | 0.08 | 0.00 | 37.29 | 1.28 |
481 | 3079 | 6.056884 | GCTCCTAGCCTATACGTAGTCATAT | 58.943 | 44.000 | 0.08 | 0.00 | 37.29 | 1.78 |
482 | 3080 | 5.046087 | TGCTCCTAGCCTATACGTAGTCATA | 60.046 | 44.000 | 0.08 | 0.00 | 40.14 | 2.15 |
483 | 3081 | 4.263374 | TGCTCCTAGCCTATACGTAGTCAT | 60.263 | 45.833 | 0.08 | 0.00 | 40.14 | 3.06 |
484 | 3082 | 3.072038 | TGCTCCTAGCCTATACGTAGTCA | 59.928 | 47.826 | 0.08 | 0.00 | 40.14 | 3.41 |
485 | 3083 | 3.672808 | TGCTCCTAGCCTATACGTAGTC | 58.327 | 50.000 | 0.08 | 0.00 | 40.14 | 2.59 |
486 | 3084 | 3.784511 | TGCTCCTAGCCTATACGTAGT | 57.215 | 47.619 | 0.08 | 0.00 | 43.11 | 2.73 |
487 | 3085 | 3.440872 | CCTTGCTCCTAGCCTATACGTAG | 59.559 | 52.174 | 0.08 | 0.00 | 41.51 | 3.51 |
488 | 3086 | 3.181436 | ACCTTGCTCCTAGCCTATACGTA | 60.181 | 47.826 | 0.00 | 0.00 | 41.51 | 3.57 |
489 | 3087 | 2.240279 | CCTTGCTCCTAGCCTATACGT | 58.760 | 52.381 | 0.00 | 0.00 | 41.51 | 3.57 |
490 | 3088 | 2.240279 | ACCTTGCTCCTAGCCTATACG | 58.760 | 52.381 | 0.00 | 0.00 | 41.51 | 3.06 |
491 | 3089 | 3.898741 | AGAACCTTGCTCCTAGCCTATAC | 59.101 | 47.826 | 0.00 | 0.00 | 41.51 | 1.47 |
492 | 3090 | 4.200447 | AGAACCTTGCTCCTAGCCTATA | 57.800 | 45.455 | 0.00 | 0.00 | 41.51 | 1.31 |
493 | 3091 | 3.053359 | AGAACCTTGCTCCTAGCCTAT | 57.947 | 47.619 | 0.00 | 0.00 | 41.51 | 2.57 |
494 | 3092 | 2.552093 | AGAACCTTGCTCCTAGCCTA | 57.448 | 50.000 | 0.00 | 0.00 | 41.51 | 3.93 |
495 | 3093 | 1.662686 | AAGAACCTTGCTCCTAGCCT | 58.337 | 50.000 | 0.00 | 0.00 | 41.51 | 4.58 |
496 | 3094 | 3.055021 | ACTTAAGAACCTTGCTCCTAGCC | 60.055 | 47.826 | 10.09 | 0.00 | 41.51 | 3.93 |
497 | 3095 | 4.185394 | GACTTAAGAACCTTGCTCCTAGC | 58.815 | 47.826 | 10.09 | 0.00 | 42.82 | 3.42 |
498 | 3096 | 4.082136 | ACGACTTAAGAACCTTGCTCCTAG | 60.082 | 45.833 | 10.09 | 0.00 | 0.00 | 3.02 |
499 | 3097 | 3.830755 | ACGACTTAAGAACCTTGCTCCTA | 59.169 | 43.478 | 10.09 | 0.00 | 0.00 | 2.94 |
500 | 3098 | 2.633481 | ACGACTTAAGAACCTTGCTCCT | 59.367 | 45.455 | 10.09 | 0.00 | 0.00 | 3.69 |
501 | 3099 | 2.737252 | CACGACTTAAGAACCTTGCTCC | 59.263 | 50.000 | 10.09 | 0.00 | 0.00 | 4.70 |
502 | 3100 | 2.737252 | CCACGACTTAAGAACCTTGCTC | 59.263 | 50.000 | 10.09 | 0.00 | 0.00 | 4.26 |
503 | 3101 | 2.367567 | TCCACGACTTAAGAACCTTGCT | 59.632 | 45.455 | 10.09 | 0.00 | 0.00 | 3.91 |
504 | 3102 | 2.762745 | TCCACGACTTAAGAACCTTGC | 58.237 | 47.619 | 10.09 | 0.00 | 0.00 | 4.01 |
505 | 3103 | 5.523916 | CCATATCCACGACTTAAGAACCTTG | 59.476 | 44.000 | 10.09 | 2.21 | 0.00 | 3.61 |
506 | 3104 | 5.424252 | TCCATATCCACGACTTAAGAACCTT | 59.576 | 40.000 | 10.09 | 0.00 | 0.00 | 3.50 |
507 | 3105 | 4.960469 | TCCATATCCACGACTTAAGAACCT | 59.040 | 41.667 | 10.09 | 0.00 | 0.00 | 3.50 |
508 | 3106 | 5.272283 | TCCATATCCACGACTTAAGAACC | 57.728 | 43.478 | 10.09 | 0.00 | 0.00 | 3.62 |
509 | 3107 | 7.254795 | CCAATTCCATATCCACGACTTAAGAAC | 60.255 | 40.741 | 10.09 | 2.05 | 0.00 | 3.01 |
510 | 3108 | 6.765989 | CCAATTCCATATCCACGACTTAAGAA | 59.234 | 38.462 | 10.09 | 0.00 | 0.00 | 2.52 |
511 | 3109 | 6.126883 | ACCAATTCCATATCCACGACTTAAGA | 60.127 | 38.462 | 10.09 | 0.00 | 0.00 | 2.10 |
512 | 3110 | 6.055588 | ACCAATTCCATATCCACGACTTAAG | 58.944 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
513 | 3111 | 5.996644 | ACCAATTCCATATCCACGACTTAA | 58.003 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
517 | 3115 | 3.746492 | GCTACCAATTCCATATCCACGAC | 59.254 | 47.826 | 0.00 | 0.00 | 0.00 | 4.34 |
525 | 3123 | 8.271458 | TGAAGACAATAAGCTACCAATTCCATA | 58.729 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
590 | 3193 | 9.706691 | AATAACTTTTGAACTCTGATACTCGAA | 57.293 | 29.630 | 0.00 | 0.00 | 0.00 | 3.71 |
688 | 3302 | 2.290071 | CCCCGTGACAACAGGAAACTAT | 60.290 | 50.000 | 0.00 | 0.00 | 40.21 | 2.12 |
705 | 3319 | 3.244422 | TGCTAGCATTTTATAGTCCCCCG | 60.244 | 47.826 | 14.93 | 0.00 | 0.00 | 5.73 |
706 | 3320 | 4.367039 | TGCTAGCATTTTATAGTCCCCC | 57.633 | 45.455 | 14.93 | 0.00 | 0.00 | 5.40 |
805 | 3443 | 1.265568 | CGTCCGTCCGTTCATTACAG | 58.734 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
806 | 3444 | 0.109179 | CCGTCCGTCCGTTCATTACA | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
807 | 3445 | 0.171007 | TCCGTCCGTCCGTTCATTAC | 59.829 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
808 | 3446 | 0.171007 | GTCCGTCCGTCCGTTCATTA | 59.829 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
810 | 3448 | 2.570181 | GTCCGTCCGTCCGTTCAT | 59.430 | 61.111 | 0.00 | 0.00 | 0.00 | 2.57 |
811 | 3449 | 4.029186 | CGTCCGTCCGTCCGTTCA | 62.029 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
812 | 3450 | 4.766088 | CCGTCCGTCCGTCCGTTC | 62.766 | 72.222 | 0.00 | 0.00 | 0.00 | 3.95 |
826 | 3472 | 3.288308 | CTCTGAACGAGCCAGCCGT | 62.288 | 63.158 | 0.00 | 1.15 | 42.61 | 5.68 |
852 | 3550 | 0.970427 | TCACTGCCGCAGAGGATACA | 60.970 | 55.000 | 27.12 | 0.00 | 45.00 | 2.29 |
853 | 3551 | 0.175760 | TTCACTGCCGCAGAGGATAC | 59.824 | 55.000 | 27.12 | 0.00 | 45.00 | 2.24 |
854 | 3552 | 0.461548 | CTTCACTGCCGCAGAGGATA | 59.538 | 55.000 | 27.12 | 12.27 | 45.00 | 2.59 |
933 | 3638 | 7.284944 | GCATAGTAGGAGGTAAGTGTAAGAGAA | 59.715 | 40.741 | 0.00 | 0.00 | 0.00 | 2.87 |
992 | 3714 | 1.108776 | AATGATGTGCATCCACCTGC | 58.891 | 50.000 | 9.39 | 0.00 | 41.35 | 4.85 |
995 | 3828 | 2.423185 | TCGAAAATGATGTGCATCCACC | 59.577 | 45.455 | 9.39 | 0.00 | 41.35 | 4.61 |
996 | 3829 | 3.763097 | TCGAAAATGATGTGCATCCAC | 57.237 | 42.857 | 9.39 | 0.00 | 42.40 | 4.02 |
997 | 3830 | 3.427909 | GCTTCGAAAATGATGTGCATCCA | 60.428 | 43.478 | 9.39 | 0.00 | 35.78 | 3.41 |
1000 | 3833 | 3.853831 | TGCTTCGAAAATGATGTGCAT | 57.146 | 38.095 | 0.00 | 0.00 | 39.43 | 3.96 |
1001 | 3834 | 3.004629 | ACTTGCTTCGAAAATGATGTGCA | 59.995 | 39.130 | 0.00 | 0.00 | 0.00 | 4.57 |
1004 | 3837 | 4.756642 | TCAGACTTGCTTCGAAAATGATGT | 59.243 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
1028 | 3861 | 0.582005 | GAACTCGTCAAGTGTGCCAC | 59.418 | 55.000 | 0.00 | 0.00 | 38.58 | 5.01 |
1075 | 3908 | 2.557056 | CAGTGTCGGACAGGTAGAGAAA | 59.443 | 50.000 | 11.83 | 0.00 | 0.00 | 2.52 |
1076 | 3909 | 2.160205 | CAGTGTCGGACAGGTAGAGAA | 58.840 | 52.381 | 11.83 | 0.00 | 0.00 | 2.87 |
1152 | 3985 | 2.610438 | ATGGGTTGCTGGAAATCACT | 57.390 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1154 | 3987 | 5.022122 | TCAAATATGGGTTGCTGGAAATCA | 58.978 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
1225 | 4058 | 0.676736 | CCCAAAAAGGTTAGCCGCAA | 59.323 | 50.000 | 0.00 | 0.00 | 40.50 | 4.85 |
1230 | 4063 | 1.546029 | CTGAGCCCCAAAAAGGTTAGC | 59.454 | 52.381 | 0.00 | 0.00 | 34.66 | 3.09 |
1253 | 4086 | 1.888436 | TACCTCTTCAGGCAGCGTGG | 61.888 | 60.000 | 15.01 | 1.14 | 45.05 | 4.94 |
1270 | 4103 | 2.681344 | CCAAGGCCGTCAAATTACCTAC | 59.319 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1278 | 4111 | 0.035439 | GATCCTCCAAGGCCGTCAAA | 60.035 | 55.000 | 0.00 | 0.00 | 34.61 | 2.69 |
1285 | 4118 | 3.574354 | AAGATTGAGATCCTCCAAGGC | 57.426 | 47.619 | 0.00 | 0.00 | 34.61 | 4.35 |
1445 | 4284 | 6.431722 | CCTTCCAAATAATTACCCTGAAGGA | 58.568 | 40.000 | 20.59 | 7.00 | 46.71 | 3.36 |
1511 | 4350 | 5.413833 | AGCTGATTTGTAGACACATCCAAAG | 59.586 | 40.000 | 6.39 | 0.17 | 33.36 | 2.77 |
1519 | 4358 | 4.081642 | TCCTACCAGCTGATTTGTAGACAC | 60.082 | 45.833 | 22.21 | 0.00 | 34.04 | 3.67 |
1524 | 4363 | 3.580895 | TGTGTCCTACCAGCTGATTTGTA | 59.419 | 43.478 | 17.39 | 7.84 | 0.00 | 2.41 |
1526 | 4365 | 3.057969 | TGTGTCCTACCAGCTGATTTG | 57.942 | 47.619 | 17.39 | 0.00 | 0.00 | 2.32 |
1542 | 4381 | 0.036010 | CAAGCTCGGGGAAGATGTGT | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
1573 | 4412 | 2.230130 | ATTCCGCCCAATTTCAGGAA | 57.770 | 45.000 | 0.00 | 0.00 | 43.98 | 3.36 |
1579 | 4418 | 1.470051 | ACGCTTATTCCGCCCAATTT | 58.530 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1581 | 4420 | 1.878953 | CTACGCTTATTCCGCCCAAT | 58.121 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1582 | 4421 | 0.812412 | GCTACGCTTATTCCGCCCAA | 60.812 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
1584 | 4423 | 2.308039 | CGCTACGCTTATTCCGCCC | 61.308 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
1586 | 4425 | 1.694639 | ATACGCTACGCTTATTCCGC | 58.305 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
1588 | 4427 | 5.689068 | AGTTGTTATACGCTACGCTTATTCC | 59.311 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1590 | 4429 | 6.976925 | AGAAGTTGTTATACGCTACGCTTATT | 59.023 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
1593 | 4432 | 4.741342 | AGAAGTTGTTATACGCTACGCTT | 58.259 | 39.130 | 0.00 | 0.00 | 0.00 | 4.68 |
1594 | 4433 | 4.096081 | AGAGAAGTTGTTATACGCTACGCT | 59.904 | 41.667 | 0.00 | 0.00 | 0.00 | 5.07 |
1595 | 4434 | 4.204573 | CAGAGAAGTTGTTATACGCTACGC | 59.795 | 45.833 | 0.00 | 0.00 | 0.00 | 4.42 |
1596 | 4435 | 4.733887 | CCAGAGAAGTTGTTATACGCTACG | 59.266 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
1597 | 4436 | 5.041940 | CCCAGAGAAGTTGTTATACGCTAC | 58.958 | 45.833 | 0.00 | 0.00 | 0.00 | 3.58 |
1598 | 4437 | 4.951715 | TCCCAGAGAAGTTGTTATACGCTA | 59.048 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
1599 | 4438 | 3.767673 | TCCCAGAGAAGTTGTTATACGCT | 59.232 | 43.478 | 0.00 | 0.00 | 0.00 | 5.07 |
1600 | 4439 | 4.119442 | TCCCAGAGAAGTTGTTATACGC | 57.881 | 45.455 | 0.00 | 0.00 | 0.00 | 4.42 |
1601 | 4440 | 5.661458 | ACATCCCAGAGAAGTTGTTATACG | 58.339 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
1602 | 4441 | 6.539103 | GGAACATCCCAGAGAAGTTGTTATAC | 59.461 | 42.308 | 0.00 | 0.00 | 36.56 | 1.47 |
1603 | 4442 | 6.650120 | GGAACATCCCAGAGAAGTTGTTATA | 58.350 | 40.000 | 0.00 | 0.00 | 36.56 | 0.98 |
1605 | 4444 | 4.906618 | GGAACATCCCAGAGAAGTTGTTA | 58.093 | 43.478 | 0.00 | 0.00 | 36.56 | 2.41 |
1693 | 8621 | 5.104982 | AGTTTTGAAAGGCCTGATGTTGAAA | 60.105 | 36.000 | 5.69 | 0.00 | 0.00 | 2.69 |
1698 | 8626 | 2.036346 | GCAGTTTTGAAAGGCCTGATGT | 59.964 | 45.455 | 5.69 | 0.00 | 0.00 | 3.06 |
1775 | 8703 | 3.696051 | TCCTGGATGCTCACTAAAAATGC | 59.304 | 43.478 | 0.00 | 0.00 | 0.00 | 3.56 |
1777 | 8705 | 5.435291 | CTCTCCTGGATGCTCACTAAAAAT | 58.565 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
1778 | 8706 | 4.836825 | CTCTCCTGGATGCTCACTAAAAA | 58.163 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
1808 | 8742 | 2.751259 | TGATTCTGACTGAAAGCCATGC | 59.249 | 45.455 | 0.00 | 0.00 | 38.29 | 4.06 |
1895 | 8830 | 4.372656 | AGGCATTGTTCGATAAGTCTAGC | 58.627 | 43.478 | 0.00 | 0.00 | 0.00 | 3.42 |
2049 | 8984 | 4.897076 | GGTACCCCTAAAATGGTTATTGGG | 59.103 | 45.833 | 0.00 | 0.00 | 36.04 | 4.12 |
2080 | 9015 | 4.684242 | GGTTTTTGCATTTCTTAAGACCCG | 59.316 | 41.667 | 4.18 | 0.00 | 0.00 | 5.28 |
2240 | 9176 | 2.109425 | ATACCTGGAGTTTGCGGAAC | 57.891 | 50.000 | 0.00 | 0.00 | 38.58 | 3.62 |
2331 | 9267 | 4.552166 | ATGTGGAGTCAACGTTTTTCTG | 57.448 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
2333 | 9269 | 4.319984 | GGGTATGTGGAGTCAACGTTTTTC | 60.320 | 45.833 | 0.00 | 0.00 | 0.00 | 2.29 |
2334 | 9270 | 3.566742 | GGGTATGTGGAGTCAACGTTTTT | 59.433 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
2335 | 9271 | 3.143728 | GGGTATGTGGAGTCAACGTTTT | 58.856 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
2337 | 9273 | 1.975680 | AGGGTATGTGGAGTCAACGTT | 59.024 | 47.619 | 0.00 | 0.00 | 0.00 | 3.99 |
2537 | 9491 | 1.757118 | TCTTCCGGAATACAGCCTGAG | 59.243 | 52.381 | 19.21 | 1.19 | 0.00 | 3.35 |
2576 | 9530 | 2.989571 | AGAAAGGTCCAAGGATTCCAGT | 59.010 | 45.455 | 5.29 | 0.00 | 0.00 | 4.00 |
2840 | 9797 | 0.729116 | CCACGAAGCAATACAGCCAG | 59.271 | 55.000 | 0.00 | 0.00 | 34.23 | 4.85 |
3042 | 10006 | 5.006358 | GGACGCGATACAACATTACTTCAAT | 59.994 | 40.000 | 15.93 | 0.00 | 0.00 | 2.57 |
3067 | 10033 | 8.171196 | GGAAATATTACACACATGCTCGATATG | 58.829 | 37.037 | 7.92 | 7.92 | 0.00 | 1.78 |
3113 | 10089 | 4.461198 | AGCAAGTACTTTTAGCACCAACT | 58.539 | 39.130 | 16.20 | 0.00 | 0.00 | 3.16 |
3120 | 10096 | 8.488651 | TCCAATTACTAGCAAGTACTTTTAGC | 57.511 | 34.615 | 17.76 | 13.57 | 37.94 | 3.09 |
3124 | 10100 | 8.863872 | AACATCCAATTACTAGCAAGTACTTT | 57.136 | 30.769 | 5.07 | 0.00 | 37.94 | 2.66 |
3180 | 10173 | 7.725251 | AGCTACCAAACAATCAAATCTGAAAA | 58.275 | 30.769 | 0.00 | 0.00 | 34.49 | 2.29 |
3301 | 10347 | 1.220817 | CCACAAAATGGCGGCACAAC | 61.221 | 55.000 | 16.34 | 0.00 | 43.24 | 3.32 |
3459 | 10506 | 4.201647 | CGCTTTGGTTGATCAAATTGATGC | 60.202 | 41.667 | 13.82 | 6.87 | 37.20 | 3.91 |
3779 | 10846 | 3.801638 | GCAGTATATGAGGTGTGGCAGAG | 60.802 | 52.174 | 0.00 | 0.00 | 0.00 | 3.35 |
3828 | 10913 | 6.088173 | GGCGTTAACATTTCCGAAAAGTAAT | 58.912 | 36.000 | 6.39 | 0.00 | 0.00 | 1.89 |
3837 | 10922 | 0.875728 | TGTGGGCGTTAACATTTCCG | 59.124 | 50.000 | 6.39 | 0.00 | 0.00 | 4.30 |
3838 | 10923 | 1.068125 | GGTGTGGGCGTTAACATTTCC | 60.068 | 52.381 | 6.39 | 1.91 | 0.00 | 3.13 |
3839 | 10924 | 1.068125 | GGGTGTGGGCGTTAACATTTC | 60.068 | 52.381 | 6.39 | 0.00 | 0.00 | 2.17 |
3840 | 10925 | 0.963225 | GGGTGTGGGCGTTAACATTT | 59.037 | 50.000 | 6.39 | 0.00 | 0.00 | 2.32 |
3842 | 10927 | 1.673009 | CGGGTGTGGGCGTTAACAT | 60.673 | 57.895 | 6.39 | 0.00 | 0.00 | 2.71 |
3843 | 10928 | 2.280933 | CGGGTGTGGGCGTTAACA | 60.281 | 61.111 | 6.39 | 0.00 | 0.00 | 2.41 |
3844 | 10929 | 2.281002 | ACGGGTGTGGGCGTTAAC | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 2.01 |
3845 | 10930 | 2.280933 | CACGGGTGTGGGCGTTAA | 60.281 | 61.111 | 0.00 | 0.00 | 42.59 | 2.01 |
3858 | 10943 | 3.039202 | GATCTGCAAACGCCCACGG | 62.039 | 63.158 | 0.00 | 0.00 | 46.04 | 4.94 |
3886 | 10971 | 0.609131 | AAAATGAGTGGTGGCGGAGG | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3887 | 10972 | 0.523072 | CAAAATGAGTGGTGGCGGAG | 59.477 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3888 | 10973 | 1.523154 | GCAAAATGAGTGGTGGCGGA | 61.523 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
3889 | 10974 | 1.080569 | GCAAAATGAGTGGTGGCGG | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
3890 | 10975 | 1.080569 | GGCAAAATGAGTGGTGGCG | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
3891 | 10976 | 0.319813 | GTGGCAAAATGAGTGGTGGC | 60.320 | 55.000 | 0.00 | 0.00 | 37.09 | 5.01 |
3892 | 10977 | 0.039256 | CGTGGCAAAATGAGTGGTGG | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3893 | 10978 | 0.667993 | ACGTGGCAAAATGAGTGGTG | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3894 | 10979 | 2.264005 | TACGTGGCAAAATGAGTGGT | 57.736 | 45.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3895 | 10980 | 2.746904 | TCATACGTGGCAAAATGAGTGG | 59.253 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
3896 | 10981 | 4.418013 | TTCATACGTGGCAAAATGAGTG | 57.582 | 40.909 | 0.00 | 0.00 | 30.53 | 3.51 |
3897 | 10982 | 5.645929 | TGTATTCATACGTGGCAAAATGAGT | 59.354 | 36.000 | 0.00 | 0.00 | 36.06 | 3.41 |
3898 | 10983 | 6.117911 | TGTATTCATACGTGGCAAAATGAG | 57.882 | 37.500 | 0.00 | 0.00 | 36.06 | 2.90 |
3900 | 10985 | 6.493978 | TCATGTATTCATACGTGGCAAAATG | 58.506 | 36.000 | 15.96 | 0.00 | 45.70 | 2.32 |
3901 | 10986 | 6.691754 | TCATGTATTCATACGTGGCAAAAT | 57.308 | 33.333 | 15.96 | 0.00 | 45.70 | 1.82 |
3907 | 10992 | 5.107337 | GCTGATGTCATGTATTCATACGTGG | 60.107 | 44.000 | 15.96 | 3.92 | 45.70 | 4.94 |
3908 | 10993 | 5.463061 | TGCTGATGTCATGTATTCATACGTG | 59.537 | 40.000 | 11.53 | 11.53 | 46.56 | 4.49 |
3909 | 10994 | 5.600696 | TGCTGATGTCATGTATTCATACGT | 58.399 | 37.500 | 0.00 | 0.00 | 36.06 | 3.57 |
3910 | 10995 | 5.922544 | TCTGCTGATGTCATGTATTCATACG | 59.077 | 40.000 | 0.00 | 0.00 | 36.06 | 3.06 |
3911 | 10996 | 7.719778 | TTCTGCTGATGTCATGTATTCATAC | 57.280 | 36.000 | 0.00 | 0.00 | 32.47 | 2.39 |
3912 | 10997 | 8.913487 | ATTTCTGCTGATGTCATGTATTCATA | 57.087 | 30.769 | 0.00 | 0.00 | 32.47 | 2.15 |
3914 | 10999 | 7.052248 | AGATTTCTGCTGATGTCATGTATTCA | 58.948 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
3915 | 11000 | 7.493743 | AGATTTCTGCTGATGTCATGTATTC | 57.506 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3917 | 11002 | 7.876936 | AAAGATTTCTGCTGATGTCATGTAT | 57.123 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3920 | 11005 | 6.310467 | CCAAAAAGATTTCTGCTGATGTCATG | 59.690 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
3922 | 11007 | 5.302568 | ACCAAAAAGATTTCTGCTGATGTCA | 59.697 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3923 | 11008 | 5.776744 | ACCAAAAAGATTTCTGCTGATGTC | 58.223 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
3924 | 11009 | 5.796424 | ACCAAAAAGATTTCTGCTGATGT | 57.204 | 34.783 | 0.00 | 0.00 | 0.00 | 3.06 |
3927 | 11012 | 6.315891 | CCAAAAACCAAAAAGATTTCTGCTGA | 59.684 | 34.615 | 0.00 | 0.00 | 0.00 | 4.26 |
3928 | 11013 | 6.488817 | CCAAAAACCAAAAAGATTTCTGCTG | 58.511 | 36.000 | 0.00 | 0.00 | 0.00 | 4.41 |
3929 | 11014 | 5.066375 | GCCAAAAACCAAAAAGATTTCTGCT | 59.934 | 36.000 | 0.00 | 0.00 | 0.00 | 4.24 |
3931 | 11016 | 6.682423 | AGCCAAAAACCAAAAAGATTTCTG | 57.318 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
3932 | 11017 | 8.800370 | TTAAGCCAAAAACCAAAAAGATTTCT | 57.200 | 26.923 | 0.00 | 0.00 | 0.00 | 2.52 |
3933 | 11018 | 9.847706 | TTTTAAGCCAAAAACCAAAAAGATTTC | 57.152 | 25.926 | 0.00 | 0.00 | 33.14 | 2.17 |
3936 | 11021 | 9.800433 | CATTTTTAAGCCAAAAACCAAAAAGAT | 57.200 | 25.926 | 8.31 | 0.00 | 46.19 | 2.40 |
3938 | 11023 | 8.978564 | ACATTTTTAAGCCAAAAACCAAAAAG | 57.021 | 26.923 | 8.31 | 0.00 | 46.19 | 2.27 |
3939 | 11024 | 9.764363 | AAACATTTTTAAGCCAAAAACCAAAAA | 57.236 | 22.222 | 8.31 | 0.00 | 46.19 | 1.94 |
3940 | 11025 | 9.764363 | AAAACATTTTTAAGCCAAAAACCAAAA | 57.236 | 22.222 | 8.31 | 0.00 | 46.19 | 2.44 |
3983 | 11068 | 6.095720 | TGGTGAAAACGGATTTTTAGTTCACT | 59.904 | 34.615 | 11.96 | 0.00 | 38.17 | 3.41 |
3984 | 11069 | 6.267070 | TGGTGAAAACGGATTTTTAGTTCAC | 58.733 | 36.000 | 0.00 | 0.00 | 38.17 | 3.18 |
3985 | 11070 | 6.452494 | TGGTGAAAACGGATTTTTAGTTCA | 57.548 | 33.333 | 0.00 | 0.00 | 38.17 | 3.18 |
3986 | 11071 | 7.940178 | AATGGTGAAAACGGATTTTTAGTTC | 57.060 | 32.000 | 0.00 | 0.00 | 38.17 | 3.01 |
3988 | 11073 | 9.990360 | ATTTAATGGTGAAAACGGATTTTTAGT | 57.010 | 25.926 | 0.00 | 0.00 | 38.17 | 2.24 |
3990 | 11075 | 9.425577 | GGATTTAATGGTGAAAACGGATTTTTA | 57.574 | 29.630 | 0.00 | 0.00 | 38.17 | 1.52 |
3991 | 11076 | 7.117092 | CGGATTTAATGGTGAAAACGGATTTTT | 59.883 | 33.333 | 0.00 | 0.00 | 38.17 | 1.94 |
3992 | 11077 | 6.588373 | CGGATTTAATGGTGAAAACGGATTTT | 59.412 | 34.615 | 0.00 | 0.00 | 40.83 | 1.82 |
3993 | 11078 | 6.096695 | CGGATTTAATGGTGAAAACGGATTT | 58.903 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3994 | 11079 | 5.184287 | ACGGATTTAATGGTGAAAACGGATT | 59.816 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3998 | 11083 | 5.291293 | AGACGGATTTAATGGTGAAAACG | 57.709 | 39.130 | 0.00 | 0.00 | 0.00 | 3.60 |
3999 | 11084 | 5.121142 | TCGAGACGGATTTAATGGTGAAAAC | 59.879 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
4001 | 11086 | 4.823157 | TCGAGACGGATTTAATGGTGAAA | 58.177 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
4002 | 11087 | 4.459390 | TCGAGACGGATTTAATGGTGAA | 57.541 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.