Multiple sequence alignment - TraesCS3B01G448100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G448100 chr3B 100.000 5723 0 0 1 5723 688088600 688082878 0.000000e+00 10569
1 TraesCS3B01G448100 chr3B 85.817 1946 142 64 2558 4418 687758714 687760610 0.000000e+00 1941
2 TraesCS3B01G448100 chr3B 86.297 1299 109 42 788 2060 687756864 687758119 0.000000e+00 1349
3 TraesCS3B01G448100 chr3B 78.947 247 29 12 2198 2428 687758258 687758497 4.620000e-31 147
4 TraesCS3B01G448100 chr3D 91.781 2324 114 37 2498 4792 522197504 522195229 0.000000e+00 3162
5 TraesCS3B01G448100 chr3D 86.266 1995 138 57 561 2497 522199501 522197585 0.000000e+00 2041
6 TraesCS3B01G448100 chr3D 85.577 1352 109 39 788 2098 522187217 522188523 0.000000e+00 1338
7 TraesCS3B01G448100 chr3D 88.118 1153 63 29 2558 3646 522189146 522190288 0.000000e+00 1303
8 TraesCS3B01G448100 chr3D 92.641 693 49 2 5032 5723 240406441 240407132 0.000000e+00 996
9 TraesCS3B01G448100 chr3D 90.377 717 50 13 3727 4438 522190292 522190994 0.000000e+00 924
10 TraesCS3B01G448100 chr3D 85.135 222 15 8 313 533 522199865 522199661 1.620000e-50 211
11 TraesCS3B01G448100 chr3D 80.328 305 34 14 2140 2428 522188632 522188926 2.090000e-49 207
12 TraesCS3B01G448100 chr3D 90.968 155 11 3 123 276 236672569 236672417 7.520000e-49 206
13 TraesCS3B01G448100 chr3A 86.258 1892 133 56 2615 4421 657232562 657234411 0.000000e+00 1936
14 TraesCS3B01G448100 chr3A 88.235 1598 124 25 3306 4883 657272486 657270933 0.000000e+00 1851
15 TraesCS3B01G448100 chr3A 87.854 1202 81 16 600 1772 657275114 657273949 0.000000e+00 1351
16 TraesCS3B01G448100 chr3A 82.328 1177 89 54 788 1892 657230658 657231787 0.000000e+00 911
17 TraesCS3B01G448100 chr3A 90.812 468 19 9 2758 3201 657273010 657272543 6.340000e-169 604
18 TraesCS3B01G448100 chr3A 90.074 272 11 5 268 538 657275370 657275114 7.100000e-89 339
19 TraesCS3B01G448100 chr3A 82.609 391 26 17 2309 2679 657273400 657273032 2.000000e-79 307
20 TraesCS3B01G448100 chr3A 89.820 167 12 5 113 278 110030206 110030044 5.810000e-50 209
21 TraesCS3B01G448100 chr3A 85.841 113 10 4 1878 1984 657273888 657273776 1.300000e-21 115
22 TraesCS3B01G448100 chr6B 93.074 693 47 1 5032 5723 539581045 539581737 0.000000e+00 1013
23 TraesCS3B01G448100 chr2B 92.939 694 47 2 5032 5723 655932030 655931337 0.000000e+00 1009
24 TraesCS3B01G448100 chr2B 92.806 695 47 3 5032 5723 758482141 758481447 0.000000e+00 1003
25 TraesCS3B01G448100 chr2B 92.641 693 49 2 5032 5723 680627865 680628556 0.000000e+00 996
26 TraesCS3B01G448100 chr7B 92.496 693 50 2 5032 5723 205822159 205821468 0.000000e+00 990
27 TraesCS3B01G448100 chr7B 93.706 143 6 2 124 266 736367478 736367617 1.620000e-50 211
28 TraesCS3B01G448100 chr7B 88.166 169 15 5 140 304 713622833 713623000 4.520000e-46 196
29 TraesCS3B01G448100 chr4B 92.609 690 50 1 5032 5720 463186706 463187395 0.000000e+00 990
30 TraesCS3B01G448100 chr4B 96.269 134 4 1 139 271 576982569 576982436 9.650000e-53 219
31 TraesCS3B01G448100 chr1B 92.496 693 51 1 5032 5723 184336370 184335678 0.000000e+00 990
32 TraesCS3B01G448100 chr1B 92.507 694 48 4 5032 5723 535682110 535682801 0.000000e+00 990
33 TraesCS3B01G448100 chr5B 96.241 133 5 0 135 267 421613257 421613389 9.650000e-53 219
34 TraesCS3B01G448100 chr1D 96.923 130 4 0 137 266 368493682 368493811 9.650000e-53 219
35 TraesCS3B01G448100 chr2A 94.964 139 6 1 130 267 773232166 773232304 3.470000e-52 217
36 TraesCS3B01G448100 chr7A 91.139 158 8 6 131 287 821632 821480 5.810000e-50 209


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G448100 chr3B 688082878 688088600 5722 True 10569.000000 10569 100.000000 1 5723 1 chr3B.!!$R1 5722
1 TraesCS3B01G448100 chr3B 687756864 687760610 3746 False 1145.666667 1941 83.687000 788 4418 3 chr3B.!!$F1 3630
2 TraesCS3B01G448100 chr3D 522195229 522199865 4636 True 1804.666667 3162 87.727333 313 4792 3 chr3D.!!$R2 4479
3 TraesCS3B01G448100 chr3D 240406441 240407132 691 False 996.000000 996 92.641000 5032 5723 1 chr3D.!!$F1 691
4 TraesCS3B01G448100 chr3D 522187217 522190994 3777 False 943.000000 1338 86.100000 788 4438 4 chr3D.!!$F2 3650
5 TraesCS3B01G448100 chr3A 657230658 657234411 3753 False 1423.500000 1936 84.293000 788 4421 2 chr3A.!!$F1 3633
6 TraesCS3B01G448100 chr3A 657270933 657275370 4437 True 761.166667 1851 87.570833 268 4883 6 chr3A.!!$R2 4615
7 TraesCS3B01G448100 chr6B 539581045 539581737 692 False 1013.000000 1013 93.074000 5032 5723 1 chr6B.!!$F1 691
8 TraesCS3B01G448100 chr2B 655931337 655932030 693 True 1009.000000 1009 92.939000 5032 5723 1 chr2B.!!$R1 691
9 TraesCS3B01G448100 chr2B 758481447 758482141 694 True 1003.000000 1003 92.806000 5032 5723 1 chr2B.!!$R2 691
10 TraesCS3B01G448100 chr2B 680627865 680628556 691 False 996.000000 996 92.641000 5032 5723 1 chr2B.!!$F1 691
11 TraesCS3B01G448100 chr7B 205821468 205822159 691 True 990.000000 990 92.496000 5032 5723 1 chr7B.!!$R1 691
12 TraesCS3B01G448100 chr4B 463186706 463187395 689 False 990.000000 990 92.609000 5032 5720 1 chr4B.!!$F1 688
13 TraesCS3B01G448100 chr1B 184335678 184336370 692 True 990.000000 990 92.496000 5032 5723 1 chr1B.!!$R1 691
14 TraesCS3B01G448100 chr1B 535682110 535682801 691 False 990.000000 990 92.507000 5032 5723 1 chr1B.!!$F1 691

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
262 263 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
264 265 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.0 13.64 0.00 46.06 3.85 F
265 266 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.00 46.06 2.59 F
266 267 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.0 13.64 0.00 46.06 2.12 F
1800 2107 0.043637 ATTAAGACACGGGGAGGGGA 59.956 55.0 0.00 0.00 0.00 4.81 F
2875 3663 0.107017 ATGGGAATTCTGGACGGCAG 60.107 55.0 5.23 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1258 1495 1.168714 ATCAAAGCAGCCGGAGAAAC 58.831 50.000 5.05 0.00 0.00 2.78 R
2265 2720 1.369625 GAAGGGTCGATCGCAACAAT 58.630 50.000 11.09 0.00 0.00 2.71 R
2357 2920 2.359169 TTGGAGCTAGCGACAGGGG 61.359 63.158 9.55 0.00 0.00 4.79 R
2432 3033 2.207590 CGGCGAGGTTAAGGTTTATCC 58.792 52.381 0.00 0.00 0.00 2.59 R
3275 4081 1.228521 CATGTCCCACAGCCCACAA 60.229 57.895 0.00 0.00 0.00 3.33 R
5016 5921 0.178964 CCTTTTGGCTCTGACCCCAA 60.179 55.000 1.93 1.93 39.23 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.900716 GCTCAATGAGTCCTAGGTCC 57.099 55.000 12.29 0.55 31.39 4.46
20 21 2.393646 GCTCAATGAGTCCTAGGTCCT 58.606 52.381 12.29 6.03 31.39 3.85
21 22 3.567397 GCTCAATGAGTCCTAGGTCCTA 58.433 50.000 12.29 0.00 31.39 2.94
22 23 3.961408 GCTCAATGAGTCCTAGGTCCTAA 59.039 47.826 12.29 0.00 31.39 2.69
23 24 4.591072 GCTCAATGAGTCCTAGGTCCTAAT 59.409 45.833 12.29 2.06 31.39 1.73
24 25 5.775701 GCTCAATGAGTCCTAGGTCCTAATA 59.224 44.000 12.29 0.00 31.39 0.98
25 26 6.439058 GCTCAATGAGTCCTAGGTCCTAATAT 59.561 42.308 12.29 0.13 31.39 1.28
26 27 7.578571 GCTCAATGAGTCCTAGGTCCTAATATG 60.579 44.444 12.29 6.55 31.39 1.78
27 28 6.726299 TCAATGAGTCCTAGGTCCTAATATGG 59.274 42.308 9.08 0.00 0.00 2.74
28 29 5.681494 TGAGTCCTAGGTCCTAATATGGT 57.319 43.478 9.08 0.00 0.00 3.55
29 30 6.039415 TGAGTCCTAGGTCCTAATATGGTT 57.961 41.667 9.08 0.00 0.00 3.67
30 31 5.839063 TGAGTCCTAGGTCCTAATATGGTTG 59.161 44.000 9.08 0.00 0.00 3.77
31 32 4.593634 AGTCCTAGGTCCTAATATGGTTGC 59.406 45.833 9.08 0.00 0.00 4.17
32 33 3.908103 TCCTAGGTCCTAATATGGTTGCC 59.092 47.826 9.08 0.00 0.00 4.52
33 34 3.009143 CCTAGGTCCTAATATGGTTGCCC 59.991 52.174 0.00 0.00 0.00 5.36
53 54 5.860941 CCCATAGGCTAGATAATCGTGAT 57.139 43.478 0.00 0.00 0.00 3.06
54 55 5.837437 CCCATAGGCTAGATAATCGTGATC 58.163 45.833 0.00 0.00 0.00 2.92
55 56 5.506483 CCCATAGGCTAGATAATCGTGATCG 60.506 48.000 0.00 0.00 38.55 3.69
56 57 5.066634 CCATAGGCTAGATAATCGTGATCGT 59.933 44.000 0.00 0.00 38.33 3.73
57 58 6.404844 CCATAGGCTAGATAATCGTGATCGTT 60.405 42.308 0.00 0.00 38.33 3.85
58 59 5.455056 AGGCTAGATAATCGTGATCGTTT 57.545 39.130 0.00 0.00 38.33 3.60
59 60 5.844004 AGGCTAGATAATCGTGATCGTTTT 58.156 37.500 0.00 0.00 38.33 2.43
60 61 5.692204 AGGCTAGATAATCGTGATCGTTTTG 59.308 40.000 0.00 0.00 38.33 2.44
61 62 5.690409 GGCTAGATAATCGTGATCGTTTTGA 59.310 40.000 0.00 0.00 38.33 2.69
62 63 6.366332 GGCTAGATAATCGTGATCGTTTTGAT 59.634 38.462 0.00 0.00 41.06 2.57
63 64 7.223339 GCTAGATAATCGTGATCGTTTTGATG 58.777 38.462 0.00 0.00 37.47 3.07
64 65 6.530913 AGATAATCGTGATCGTTTTGATGG 57.469 37.500 0.00 0.00 37.47 3.51
65 66 6.049149 AGATAATCGTGATCGTTTTGATGGT 58.951 36.000 0.00 0.00 37.47 3.55
66 67 7.207383 AGATAATCGTGATCGTTTTGATGGTA 58.793 34.615 0.00 0.00 37.47 3.25
67 68 5.718649 AATCGTGATCGTTTTGATGGTAG 57.281 39.130 0.00 0.00 37.47 3.18
68 69 4.182693 TCGTGATCGTTTTGATGGTAGT 57.817 40.909 0.00 0.00 37.47 2.73
69 70 3.924073 TCGTGATCGTTTTGATGGTAGTG 59.076 43.478 0.00 0.00 37.47 2.74
70 71 3.483574 CGTGATCGTTTTGATGGTAGTGC 60.484 47.826 0.00 0.00 37.47 4.40
71 72 3.684788 GTGATCGTTTTGATGGTAGTGCT 59.315 43.478 0.00 0.00 37.47 4.40
72 73 3.684305 TGATCGTTTTGATGGTAGTGCTG 59.316 43.478 0.00 0.00 37.47 4.41
73 74 1.804151 TCGTTTTGATGGTAGTGCTGC 59.196 47.619 0.00 0.00 0.00 5.25
74 75 1.135689 CGTTTTGATGGTAGTGCTGCC 60.136 52.381 0.00 0.00 35.78 4.85
75 76 2.162681 GTTTTGATGGTAGTGCTGCCT 58.837 47.619 7.77 0.00 36.24 4.75
76 77 1.825090 TTTGATGGTAGTGCTGCCTG 58.175 50.000 7.77 0.00 36.24 4.85
77 78 0.692476 TTGATGGTAGTGCTGCCTGT 59.308 50.000 7.77 0.00 36.24 4.00
78 79 0.692476 TGATGGTAGTGCTGCCTGTT 59.308 50.000 7.77 0.00 36.24 3.16
79 80 1.089920 GATGGTAGTGCTGCCTGTTG 58.910 55.000 7.77 0.00 36.24 3.33
80 81 0.322816 ATGGTAGTGCTGCCTGTTGG 60.323 55.000 7.77 0.00 36.24 3.77
81 82 1.073199 GGTAGTGCTGCCTGTTGGT 59.927 57.895 0.00 0.00 35.27 3.67
82 83 0.537371 GGTAGTGCTGCCTGTTGGTT 60.537 55.000 0.00 0.00 35.27 3.67
83 84 0.593128 GTAGTGCTGCCTGTTGGTTG 59.407 55.000 0.00 0.00 35.27 3.77
84 85 1.172180 TAGTGCTGCCTGTTGGTTGC 61.172 55.000 0.00 0.00 35.45 4.17
85 86 3.594775 TGCTGCCTGTTGGTTGCG 61.595 61.111 0.00 0.00 36.82 4.85
87 88 4.347453 CTGCCTGTTGGTTGCGCC 62.347 66.667 4.18 0.00 35.27 6.53
95 96 3.134792 TGGTTGCGCCACGTGTTT 61.135 55.556 15.65 0.00 43.61 2.83
96 97 1.818363 TGGTTGCGCCACGTGTTTA 60.818 52.632 15.65 0.00 43.61 2.01
97 98 1.167155 TGGTTGCGCCACGTGTTTAT 61.167 50.000 15.65 0.00 43.61 1.40
98 99 0.797542 GGTTGCGCCACGTGTTTATA 59.202 50.000 15.65 0.00 37.17 0.98
99 100 1.399089 GGTTGCGCCACGTGTTTATAT 59.601 47.619 15.65 0.00 37.17 0.86
100 101 2.159490 GGTTGCGCCACGTGTTTATATT 60.159 45.455 15.65 0.00 37.17 1.28
101 102 2.815657 TGCGCCACGTGTTTATATTG 57.184 45.000 15.65 0.00 0.00 1.90
102 103 2.077627 TGCGCCACGTGTTTATATTGT 58.922 42.857 15.65 0.00 0.00 2.71
103 104 3.259902 TGCGCCACGTGTTTATATTGTA 58.740 40.909 15.65 0.00 0.00 2.41
104 105 3.872182 TGCGCCACGTGTTTATATTGTAT 59.128 39.130 15.65 0.00 0.00 2.29
105 106 4.208355 GCGCCACGTGTTTATATTGTATG 58.792 43.478 15.65 0.00 0.00 2.39
106 107 4.260456 GCGCCACGTGTTTATATTGTATGT 60.260 41.667 15.65 0.00 0.00 2.29
107 108 5.728344 GCGCCACGTGTTTATATTGTATGTT 60.728 40.000 15.65 0.00 0.00 2.71
108 109 6.252281 CGCCACGTGTTTATATTGTATGTTT 58.748 36.000 15.65 0.00 0.00 2.83
109 110 6.743627 CGCCACGTGTTTATATTGTATGTTTT 59.256 34.615 15.65 0.00 0.00 2.43
110 111 7.253158 CGCCACGTGTTTATATTGTATGTTTTG 60.253 37.037 15.65 0.00 0.00 2.44
111 112 7.008810 GCCACGTGTTTATATTGTATGTTTTGG 59.991 37.037 15.65 0.00 0.00 3.28
112 113 8.237949 CCACGTGTTTATATTGTATGTTTTGGA 58.762 33.333 15.65 0.00 0.00 3.53
113 114 9.781834 CACGTGTTTATATTGTATGTTTTGGAT 57.218 29.630 7.58 0.00 0.00 3.41
124 125 7.857734 TGTATGTTTTGGATATGTACCAGTG 57.142 36.000 0.00 0.00 38.70 3.66
125 126 6.826231 TGTATGTTTTGGATATGTACCAGTGG 59.174 38.462 7.91 7.91 38.70 4.00
126 127 5.506730 TGTTTTGGATATGTACCAGTGGA 57.493 39.130 18.40 0.00 38.70 4.02
127 128 5.250200 TGTTTTGGATATGTACCAGTGGAC 58.750 41.667 18.40 10.38 38.70 4.02
128 129 5.221945 TGTTTTGGATATGTACCAGTGGACA 60.222 40.000 18.40 15.86 38.70 4.02
129 130 4.753516 TTGGATATGTACCAGTGGACAG 57.246 45.455 18.40 0.00 38.70 3.51
130 131 3.719871 TGGATATGTACCAGTGGACAGT 58.280 45.455 18.40 8.80 33.22 3.55
131 132 4.874199 TGGATATGTACCAGTGGACAGTA 58.126 43.478 18.40 10.16 33.22 2.74
132 133 5.274015 TGGATATGTACCAGTGGACAGTAA 58.726 41.667 18.40 6.46 33.22 2.24
133 134 5.903010 TGGATATGTACCAGTGGACAGTAAT 59.097 40.000 18.40 10.49 33.22 1.89
134 135 6.041637 TGGATATGTACCAGTGGACAGTAATC 59.958 42.308 18.40 16.84 33.22 1.75
135 136 4.755266 ATGTACCAGTGGACAGTAATCC 57.245 45.455 18.40 0.00 39.45 3.01
136 137 3.786553 TGTACCAGTGGACAGTAATCCT 58.213 45.455 18.40 0.00 39.75 3.24
137 138 4.938028 TGTACCAGTGGACAGTAATCCTA 58.062 43.478 18.40 0.00 39.75 2.94
138 139 5.525484 TGTACCAGTGGACAGTAATCCTAT 58.475 41.667 18.40 0.00 39.75 2.57
139 140 5.962031 TGTACCAGTGGACAGTAATCCTATT 59.038 40.000 18.40 0.00 39.75 1.73
140 141 7.127405 TGTACCAGTGGACAGTAATCCTATTA 58.873 38.462 18.40 0.00 39.75 0.98
141 142 6.481434 ACCAGTGGACAGTAATCCTATTAC 57.519 41.667 18.40 2.27 39.75 1.89
142 143 6.203072 ACCAGTGGACAGTAATCCTATTACT 58.797 40.000 18.40 6.51 39.75 2.24
143 144 6.324254 ACCAGTGGACAGTAATCCTATTACTC 59.676 42.308 18.40 1.35 39.75 2.59
144 145 6.239345 CCAGTGGACAGTAATCCTATTACTCC 60.239 46.154 1.68 9.26 39.75 3.85
145 146 5.839606 AGTGGACAGTAATCCTATTACTCCC 59.160 44.000 8.92 12.38 39.75 4.30
146 147 5.839606 GTGGACAGTAATCCTATTACTCCCT 59.160 44.000 18.70 5.66 39.75 4.20
147 148 6.015265 GTGGACAGTAATCCTATTACTCCCTC 60.015 46.154 18.70 14.71 39.75 4.30
148 149 5.481122 GGACAGTAATCCTATTACTCCCTCC 59.519 48.000 8.92 9.37 35.68 4.30
149 150 5.078256 ACAGTAATCCTATTACTCCCTCCG 58.922 45.833 8.92 1.67 33.30 4.63
150 151 5.078256 CAGTAATCCTATTACTCCCTCCGT 58.922 45.833 8.92 0.00 33.30 4.69
151 152 5.183522 CAGTAATCCTATTACTCCCTCCGTC 59.816 48.000 8.92 0.00 33.30 4.79
152 153 2.671896 TCCTATTACTCCCTCCGTCC 57.328 55.000 0.00 0.00 0.00 4.79
153 154 1.202855 TCCTATTACTCCCTCCGTCCG 60.203 57.143 0.00 0.00 0.00 4.79
154 155 1.202855 CCTATTACTCCCTCCGTCCGA 60.203 57.143 0.00 0.00 0.00 4.55
155 156 2.579873 CTATTACTCCCTCCGTCCGAA 58.420 52.381 0.00 0.00 0.00 4.30
156 157 1.856629 ATTACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
157 158 1.631405 TTACTCCCTCCGTCCGAAAA 58.369 50.000 0.00 0.00 0.00 2.29
158 159 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
159 160 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
160 161 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
161 162 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
162 163 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
163 164 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
164 165 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
165 166 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
166 167 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
167 168 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
168 169 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
169 170 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
170 171 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
171 172 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
172 173 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
173 174 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
174 175 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
175 176 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
176 177 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
177 178 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
185 186 9.918630 ACTTGTCATCAAAATGGATAAAAAGAG 57.081 29.630 0.00 0.00 33.42 2.85
199 200 9.753674 TGGATAAAAAGAGATGTATCCAAAACT 57.246 29.630 8.45 0.00 45.69 2.66
241 242 9.657419 ACATCCCTTTTTATTCATTTTGATGAC 57.343 29.630 0.00 0.00 32.39 3.06
242 243 9.656040 CATCCCTTTTTATTCATTTTGATGACA 57.344 29.630 0.00 0.00 0.00 3.58
244 245 9.709495 TCCCTTTTTATTCATTTTGATGACAAG 57.291 29.630 0.00 0.00 37.32 3.16
245 246 9.492973 CCCTTTTTATTCATTTTGATGACAAGT 57.507 29.630 0.00 0.00 37.32 3.16
252 253 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
253 254 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
254 255 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
255 256 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
256 257 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
257 258 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
258 259 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
259 260 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
260 261 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
261 262 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
262 263 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
263 264 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
264 265 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
265 266 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
266 267 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
274 275 3.838903 GGACGGAGGGAGTATTATGGAAT 59.161 47.826 0.00 0.00 0.00 3.01
364 365 8.850454 TGCTTATTATTTTTCGGAGCAAATAC 57.150 30.769 0.00 0.00 35.91 1.89
403 405 4.219507 CCATGTGGGTGTACAAAAATGCTA 59.780 41.667 0.00 0.00 33.69 3.49
404 406 5.401550 CATGTGGGTGTACAAAAATGCTAG 58.598 41.667 0.00 0.00 33.69 3.42
405 407 4.720046 TGTGGGTGTACAAAAATGCTAGA 58.280 39.130 0.00 0.00 0.00 2.43
406 408 5.133941 TGTGGGTGTACAAAAATGCTAGAA 58.866 37.500 0.00 0.00 0.00 2.10
407 409 5.594725 TGTGGGTGTACAAAAATGCTAGAAA 59.405 36.000 0.00 0.00 0.00 2.52
408 410 6.096987 TGTGGGTGTACAAAAATGCTAGAAAA 59.903 34.615 0.00 0.00 0.00 2.29
409 411 7.151976 GTGGGTGTACAAAAATGCTAGAAAAT 58.848 34.615 0.00 0.00 0.00 1.82
410 412 7.116233 GTGGGTGTACAAAAATGCTAGAAAATG 59.884 37.037 0.00 0.00 0.00 2.32
411 413 6.090763 GGGTGTACAAAAATGCTAGAAAATGC 59.909 38.462 0.00 0.00 0.00 3.56
412 414 6.868339 GGTGTACAAAAATGCTAGAAAATGCT 59.132 34.615 0.00 0.00 0.00 3.79
437 439 7.212976 TCTAGCATCTGGACACAATCTATTTC 58.787 38.462 0.00 0.00 0.00 2.17
480 482 2.744202 CTGGCGTTTAGTGCTTCTTCAT 59.256 45.455 0.00 0.00 0.00 2.57
526 528 1.621107 GCACAAACCAATCTGCATCG 58.379 50.000 0.00 0.00 0.00 3.84
537 539 4.285292 CAATCTGCATCGCATAAAGGTTC 58.715 43.478 0.00 0.00 38.13 3.62
538 540 3.266510 TCTGCATCGCATAAAGGTTCT 57.733 42.857 0.00 0.00 38.13 3.01
540 542 3.623060 TCTGCATCGCATAAAGGTTCTTC 59.377 43.478 0.00 0.00 38.13 2.87
541 543 3.609853 TGCATCGCATAAAGGTTCTTCT 58.390 40.909 0.00 0.00 31.71 2.85
542 544 4.765273 TGCATCGCATAAAGGTTCTTCTA 58.235 39.130 0.00 0.00 31.71 2.10
543 545 5.368145 TGCATCGCATAAAGGTTCTTCTAT 58.632 37.500 0.00 0.00 31.71 1.98
544 546 5.822519 TGCATCGCATAAAGGTTCTTCTATT 59.177 36.000 0.00 0.00 31.71 1.73
546 548 7.497579 TGCATCGCATAAAGGTTCTTCTATTAA 59.502 33.333 0.00 0.00 31.71 1.40
550 552 9.661563 TCGCATAAAGGTTCTTCTATTAAAAGA 57.338 29.630 0.00 0.00 0.00 2.52
576 710 2.063979 AACGATCCCATGGCGGAGA 61.064 57.895 6.09 0.00 36.56 3.71
591 725 3.628280 GAGAGGCGGTCCGTGTGTC 62.628 68.421 13.94 4.82 37.47 3.67
594 728 4.388499 GGCGGTCCGTGTGTCCAT 62.388 66.667 13.94 0.00 0.00 3.41
595 729 2.358247 GCGGTCCGTGTGTCCATT 60.358 61.111 13.94 0.00 0.00 3.16
638 772 7.399191 GGTTAAAGAAATGGGGGATTTAAGTCT 59.601 37.037 0.00 0.00 34.18 3.24
701 835 3.664107 TGTGCAGAGGCCGATATAATTC 58.336 45.455 0.00 0.00 40.13 2.17
727 862 9.347240 CTCCCTTGAAATAATGTTCATATGAGT 57.653 33.333 5.39 0.00 37.36 3.41
769 904 4.879104 TTTGTGCTTGGCAAATTCTTTG 57.121 36.364 0.00 0.00 41.47 2.77
832 967 2.497675 ACAAGCTGATCGACATGGTACT 59.502 45.455 0.00 0.00 0.00 2.73
833 968 2.862536 CAAGCTGATCGACATGGTACTG 59.137 50.000 0.00 0.00 0.00 2.74
840 975 1.070914 TCGACATGGTACTGGCAAACA 59.929 47.619 0.00 0.00 0.00 2.83
885 1051 1.369091 GATCAGCGAACGTGCCCATT 61.369 55.000 0.00 0.00 34.65 3.16
890 1056 0.248054 GCGAACGTGCCCATTACATG 60.248 55.000 0.00 0.00 0.00 3.21
1010 1188 0.398239 CAGAGATGAGCCTCCCTCCA 60.398 60.000 7.38 0.00 39.98 3.86
1021 1199 0.109723 CTCCCTCCACCGAAACCAAA 59.890 55.000 0.00 0.00 0.00 3.28
1034 1212 0.678366 AACCAAAGACCACACGCACA 60.678 50.000 0.00 0.00 0.00 4.57
1047 1252 3.253955 GCACACCGCGACATTTCT 58.746 55.556 8.23 0.00 0.00 2.52
1083 1314 1.027255 GCGCTTTTCTTCCTCCTCCC 61.027 60.000 0.00 0.00 0.00 4.30
1084 1315 0.615850 CGCTTTTCTTCCTCCTCCCT 59.384 55.000 0.00 0.00 0.00 4.20
1085 1316 1.003696 CGCTTTTCTTCCTCCTCCCTT 59.996 52.381 0.00 0.00 0.00 3.95
1086 1317 2.717390 GCTTTTCTTCCTCCTCCCTTC 58.283 52.381 0.00 0.00 0.00 3.46
1087 1318 2.619332 GCTTTTCTTCCTCCTCCCTTCC 60.619 54.545 0.00 0.00 0.00 3.46
1088 1319 2.743131 TTTCTTCCTCCTCCCTTCCT 57.257 50.000 0.00 0.00 0.00 3.36
1089 1320 2.743131 TTCTTCCTCCTCCCTTCCTT 57.257 50.000 0.00 0.00 0.00 3.36
1090 1321 2.255770 TCTTCCTCCTCCCTTCCTTC 57.744 55.000 0.00 0.00 0.00 3.46
1091 1322 1.208706 CTTCCTCCTCCCTTCCTTCC 58.791 60.000 0.00 0.00 0.00 3.46
1092 1323 0.800239 TTCCTCCTCCCTTCCTTCCT 59.200 55.000 0.00 0.00 0.00 3.36
1093 1324 0.800239 TCCTCCTCCCTTCCTTCCTT 59.200 55.000 0.00 0.00 0.00 3.36
1094 1325 1.154434 TCCTCCTCCCTTCCTTCCTTT 59.846 52.381 0.00 0.00 0.00 3.11
1095 1326 1.562008 CCTCCTCCCTTCCTTCCTTTC 59.438 57.143 0.00 0.00 0.00 2.62
1096 1327 1.562008 CTCCTCCCTTCCTTCCTTTCC 59.438 57.143 0.00 0.00 0.00 3.13
1097 1328 0.626382 CCTCCCTTCCTTCCTTTCCC 59.374 60.000 0.00 0.00 0.00 3.97
1258 1495 3.119602 TCCTCCGTTCTTGTAAGTCATCG 60.120 47.826 0.00 0.00 0.00 3.84
1270 1507 0.108615 AGTCATCGTTTCTCCGGCTG 60.109 55.000 0.00 0.00 0.00 4.85
1360 1643 3.657634 GATGCTAGCGATCAGGATTCAA 58.342 45.455 10.77 0.00 0.00 2.69
1419 1705 7.651027 AAATTCAGTTCTGAAGGGGATATTG 57.349 36.000 18.03 0.00 0.00 1.90
1447 1737 3.042887 GTTTCTTTGTTGGTGTCATCGC 58.957 45.455 0.00 0.00 0.00 4.58
1751 2057 3.746492 GCCATTAAGTATTAGCACGAGGG 59.254 47.826 0.00 0.00 0.00 4.30
1792 2099 5.919141 AGTAAGCGCTAATATTAAGACACGG 59.081 40.000 12.05 0.00 0.00 4.94
1800 2107 0.043637 ATTAAGACACGGGGAGGGGA 59.956 55.000 0.00 0.00 0.00 4.81
1886 2199 5.358160 GCCAGCTCTGAAATAATGGTTTAGT 59.642 40.000 0.00 0.00 0.00 2.24
1892 2206 7.156876 TCTGAAATAATGGTTTAGTTGCCAG 57.843 36.000 0.00 0.00 38.27 4.85
1918 2235 4.861102 AGAACTTTCTTTCCATGCCTTG 57.139 40.909 0.00 0.00 32.55 3.61
1924 2241 3.173953 TCTTTCCATGCCTTGGTTCAT 57.826 42.857 2.98 0.00 46.52 2.57
1937 2254 4.273480 CCTTGGTTCATAATCATCACGGTC 59.727 45.833 0.00 0.00 0.00 4.79
1939 2256 2.221055 GGTTCATAATCATCACGGTCGC 59.779 50.000 0.00 0.00 0.00 5.19
1993 2329 9.754382 ATAATTGAATGAATACATGCTGTTTCC 57.246 29.630 0.00 0.00 36.79 3.13
2063 2430 3.242936 CGAGAAACCAACCAACAACGAAT 60.243 43.478 0.00 0.00 0.00 3.34
2064 2431 4.040445 AGAAACCAACCAACAACGAATG 57.960 40.909 0.00 0.00 0.00 2.67
2133 2500 3.576982 ACTAGTGTTCCACAATCCTTCGA 59.423 43.478 0.00 0.00 36.74 3.71
2156 2606 3.088789 ACCTCGTCACAGGATAGAAGT 57.911 47.619 0.75 0.00 36.96 3.01
2199 2653 0.605589 GAGACACACAGGAGACCCAG 59.394 60.000 0.00 0.00 33.88 4.45
2202 2656 0.759346 ACACACAGGAGACCCAGAAC 59.241 55.000 0.00 0.00 33.88 3.01
2265 2720 2.282039 CCCCCGGCAATTTGCTTGA 61.282 57.895 20.06 0.00 44.28 3.02
2357 2920 3.988819 AGGCGAATCTTAGAATCTCTGC 58.011 45.455 0.00 0.00 0.00 4.26
2379 2956 1.354040 CTGTCGCTAGCTCCAACTTG 58.646 55.000 13.93 0.00 0.00 3.16
2428 3029 4.919168 AGAAGATAGATAGACGAGACGACG 59.081 45.833 0.00 0.00 39.31 5.12
2556 3294 3.498777 CCTCGTTCTTTCTTTTCCCTGTC 59.501 47.826 0.00 0.00 0.00 3.51
2680 3437 3.947132 CTGCGTGCTGGCTGCTAGT 62.947 63.158 17.45 0.00 43.37 2.57
2684 3441 2.046604 TGCTGGCTGCTAGTGCTG 60.047 61.111 17.45 0.00 43.37 4.41
2806 3578 3.477530 ACTCCACCTAGTTGCTTGTTTC 58.522 45.455 0.00 0.00 0.00 2.78
2810 3582 6.212791 ACTCCACCTAGTTGCTTGTTTCTATA 59.787 38.462 0.00 0.00 0.00 1.31
2874 3662 0.107214 GATGGGAATTCTGGACGGCA 60.107 55.000 5.23 0.00 0.00 5.69
2875 3663 0.107017 ATGGGAATTCTGGACGGCAG 60.107 55.000 5.23 0.00 0.00 4.85
2918 3710 0.892358 AGGACGTGGAGAAGTACGCA 60.892 55.000 0.00 0.00 43.63 5.24
3269 4075 2.509052 TCGATCATGTGGTTCGATCC 57.491 50.000 5.52 5.52 37.01 3.36
3270 4076 2.031870 TCGATCATGTGGTTCGATCCT 58.968 47.619 13.55 0.00 37.01 3.24
3275 4081 2.038426 TCATGTGGTTCGATCCTTGTGT 59.962 45.455 13.55 0.00 0.00 3.72
3332 4161 4.887190 ACTTTGGGCGGTGGCGTT 62.887 61.111 0.00 0.00 41.24 4.84
3349 4178 3.374745 GCGTTATGATGCATTCCAAAGG 58.625 45.455 0.00 0.92 37.73 3.11
3350 4179 3.374745 CGTTATGATGCATTCCAAAGGC 58.625 45.455 0.00 0.00 0.00 4.35
3360 4190 1.178534 TTCCAAAGGCCAGCGAAAGG 61.179 55.000 5.01 0.00 0.00 3.11
3441 4271 2.114411 GACCCGGCCTTCCAAACA 59.886 61.111 0.00 0.00 0.00 2.83
3479 4309 2.435586 GCATGTCGCCTCTGTGCT 60.436 61.111 0.00 0.00 33.25 4.40
3536 4375 2.580815 CTGAGGCCTCGTCATGCA 59.419 61.111 27.43 8.09 0.00 3.96
3557 4396 2.431942 CAGGTCGTTTCCGTCGGG 60.432 66.667 12.29 0.00 35.01 5.14
3576 4415 3.931247 CGTCCACGTCCACCCCAA 61.931 66.667 0.00 0.00 34.11 4.12
3577 4416 2.032071 GTCCACGTCCACCCCAAG 59.968 66.667 0.00 0.00 0.00 3.61
3684 4544 1.977854 TGCTTATGACCGCATATCCCT 59.022 47.619 0.00 0.00 36.89 4.20
3697 4557 5.278463 CCGCATATCCCTATCAAACTTTTGG 60.278 44.000 1.94 0.00 38.66 3.28
3796 4672 6.706716 TCGTTATGTCGAGATCAATCTACTCT 59.293 38.462 0.00 0.00 37.25 3.24
3840 4735 2.479560 CGCGAGTATGATGAACTGACCA 60.480 50.000 0.00 0.00 0.00 4.02
3847 4742 7.440523 AGTATGATGAACTGACCAAAACTTC 57.559 36.000 0.00 0.00 0.00 3.01
4212 5107 4.790051 CAGCTCTGCTCACTCTCG 57.210 61.111 0.00 0.00 36.40 4.04
4304 5199 1.223211 GGAGCAGAAGAAGGAGGCC 59.777 63.158 0.00 0.00 0.00 5.19
4321 5216 4.657824 CGTGTCGGCTTCGGTGGT 62.658 66.667 0.00 0.00 34.13 4.16
4434 5332 4.079850 CGCCCTCTCAGTGCTGCT 62.080 66.667 0.00 0.00 0.00 4.24
4465 5363 2.202770 CTGCTGAGCCTGAGCGAG 60.203 66.667 0.23 0.00 46.67 5.03
4479 5377 3.261580 TGAGCGAGTGGAATGTATGTTG 58.738 45.455 0.00 0.00 0.00 3.33
4481 5379 1.064060 GCGAGTGGAATGTATGTTGCC 59.936 52.381 0.00 0.00 0.00 4.52
4579 5478 0.312729 TGCGAGTGTAGTGAAAGCGA 59.687 50.000 0.00 0.00 0.00 4.93
4707 5606 6.661805 ACGGGTGGAGATTTGTTGTAAAATAT 59.338 34.615 0.00 0.00 29.89 1.28
4708 5607 7.830201 ACGGGTGGAGATTTGTTGTAAAATATA 59.170 33.333 0.00 0.00 29.89 0.86
4709 5608 8.126700 CGGGTGGAGATTTGTTGTAAAATATAC 58.873 37.037 0.00 0.00 29.89 1.47
4710 5609 9.185680 GGGTGGAGATTTGTTGTAAAATATACT 57.814 33.333 0.00 0.00 29.89 2.12
4712 5611 9.503427 GTGGAGATTTGTTGTAAAATATACTGC 57.497 33.333 0.00 0.00 29.89 4.40
4713 5612 8.682710 TGGAGATTTGTTGTAAAATATACTGCC 58.317 33.333 0.00 0.00 29.89 4.85
4714 5613 8.903820 GGAGATTTGTTGTAAAATATACTGCCT 58.096 33.333 0.00 0.00 29.89 4.75
4715 5614 9.722056 GAGATTTGTTGTAAAATATACTGCCTG 57.278 33.333 0.00 0.00 29.89 4.85
4717 5616 6.825944 TTGTTGTAAAATATACTGCCTGCA 57.174 33.333 0.00 0.00 0.00 4.41
4860 5765 6.702723 CGGTTATACATTAAGAAACCATCGGA 59.297 38.462 0.00 0.00 39.66 4.55
4861 5766 7.386848 CGGTTATACATTAAGAAACCATCGGAT 59.613 37.037 0.00 0.00 39.66 4.18
4862 5767 9.715121 GGTTATACATTAAGAAACCATCGGATA 57.285 33.333 0.00 0.00 39.51 2.59
4871 5776 4.700213 AGAAACCATCGGATACAACCAAAG 59.300 41.667 0.00 0.00 0.00 2.77
4872 5777 2.365582 ACCATCGGATACAACCAAAGC 58.634 47.619 0.00 0.00 0.00 3.51
4880 5785 6.822442 TCGGATACAACCAAAGCAATATCTA 58.178 36.000 0.00 0.00 0.00 1.98
4883 5788 8.656849 CGGATACAACCAAAGCAATATCTATAC 58.343 37.037 0.00 0.00 0.00 1.47
4884 5789 8.656849 GGATACAACCAAAGCAATATCTATACG 58.343 37.037 0.00 0.00 0.00 3.06
4885 5790 6.861065 ACAACCAAAGCAATATCTATACGG 57.139 37.500 0.00 0.00 0.00 4.02
4886 5791 6.588204 ACAACCAAAGCAATATCTATACGGA 58.412 36.000 0.00 0.00 0.00 4.69
4887 5792 7.051623 ACAACCAAAGCAATATCTATACGGAA 58.948 34.615 0.00 0.00 0.00 4.30
4888 5793 7.554835 ACAACCAAAGCAATATCTATACGGAAA 59.445 33.333 0.00 0.00 0.00 3.13
4889 5794 8.402472 CAACCAAAGCAATATCTATACGGAAAA 58.598 33.333 0.00 0.00 0.00 2.29
4890 5795 8.154649 ACCAAAGCAATATCTATACGGAAAAG 57.845 34.615 0.00 0.00 0.00 2.27
4891 5796 7.078228 CCAAAGCAATATCTATACGGAAAAGC 58.922 38.462 0.00 0.00 0.00 3.51
4892 5797 7.041098 CCAAAGCAATATCTATACGGAAAAGCT 60.041 37.037 0.00 0.00 0.00 3.74
4893 5798 8.988934 CAAAGCAATATCTATACGGAAAAGCTA 58.011 33.333 0.00 0.00 0.00 3.32
4894 5799 9.555727 AAAGCAATATCTATACGGAAAAGCTAA 57.444 29.630 0.00 0.00 0.00 3.09
4895 5800 9.555727 AAGCAATATCTATACGGAAAAGCTAAA 57.444 29.630 0.00 0.00 0.00 1.85
4896 5801 9.555727 AGCAATATCTATACGGAAAAGCTAAAA 57.444 29.630 0.00 0.00 0.00 1.52
4901 5806 7.473027 TCTATACGGAAAAGCTAAAATTCGG 57.527 36.000 0.00 0.00 0.00 4.30
4902 5807 7.267128 TCTATACGGAAAAGCTAAAATTCGGA 58.733 34.615 12.67 0.53 0.00 4.55
4903 5808 4.414999 ACGGAAAAGCTAAAATTCGGAC 57.585 40.909 12.67 0.00 0.00 4.79
4904 5809 4.070009 ACGGAAAAGCTAAAATTCGGACT 58.930 39.130 12.67 0.00 0.00 3.85
4905 5810 4.517832 ACGGAAAAGCTAAAATTCGGACTT 59.482 37.500 12.67 0.00 0.00 3.01
4906 5811 5.086727 CGGAAAAGCTAAAATTCGGACTTC 58.913 41.667 0.00 0.00 0.00 3.01
4907 5812 5.334569 CGGAAAAGCTAAAATTCGGACTTCA 60.335 40.000 0.00 0.00 0.00 3.02
4908 5813 6.086871 GGAAAAGCTAAAATTCGGACTTCAG 58.913 40.000 0.00 0.00 0.00 3.02
4909 5814 5.629079 AAAGCTAAAATTCGGACTTCAGG 57.371 39.130 0.00 0.00 0.00 3.86
4910 5815 4.553330 AGCTAAAATTCGGACTTCAGGA 57.447 40.909 0.00 0.00 0.00 3.86
4911 5816 5.104259 AGCTAAAATTCGGACTTCAGGAT 57.896 39.130 0.00 0.00 0.00 3.24
4912 5817 5.501156 AGCTAAAATTCGGACTTCAGGATT 58.499 37.500 0.00 0.00 0.00 3.01
4913 5818 5.946377 AGCTAAAATTCGGACTTCAGGATTT 59.054 36.000 0.00 0.00 31.92 2.17
4914 5819 6.434340 AGCTAAAATTCGGACTTCAGGATTTT 59.566 34.615 11.58 11.58 40.57 1.82
4915 5820 7.610305 AGCTAAAATTCGGACTTCAGGATTTTA 59.390 33.333 12.34 12.34 39.10 1.52
4917 5822 7.761038 AAAATTCGGACTTCAGGATTTTAGT 57.239 32.000 6.59 0.00 37.43 2.24
4918 5823 8.857694 AAAATTCGGACTTCAGGATTTTAGTA 57.142 30.769 6.59 0.00 37.43 1.82
4919 5824 8.857694 AAATTCGGACTTCAGGATTTTAGTAA 57.142 30.769 0.00 0.00 27.05 2.24
4920 5825 7.845066 ATTCGGACTTCAGGATTTTAGTAAC 57.155 36.000 0.00 0.00 0.00 2.50
4921 5826 6.349243 TCGGACTTCAGGATTTTAGTAACA 57.651 37.500 0.00 0.00 0.00 2.41
4922 5827 6.395629 TCGGACTTCAGGATTTTAGTAACAG 58.604 40.000 0.00 0.00 0.00 3.16
4923 5828 6.209986 TCGGACTTCAGGATTTTAGTAACAGA 59.790 38.462 0.00 0.00 0.00 3.41
4924 5829 7.042335 CGGACTTCAGGATTTTAGTAACAGAT 58.958 38.462 0.00 0.00 0.00 2.90
4925 5830 7.222999 CGGACTTCAGGATTTTAGTAACAGATC 59.777 40.741 0.00 0.00 0.00 2.75
4926 5831 7.496263 GGACTTCAGGATTTTAGTAACAGATCC 59.504 40.741 9.57 9.57 37.20 3.36
4927 5832 7.042335 ACTTCAGGATTTTAGTAACAGATCCG 58.958 38.462 10.96 8.04 40.88 4.18
4928 5833 6.785337 TCAGGATTTTAGTAACAGATCCGA 57.215 37.500 10.96 9.45 40.88 4.55
4929 5834 7.177832 TCAGGATTTTAGTAACAGATCCGAA 57.822 36.000 10.96 4.33 40.88 4.30
4930 5835 7.039882 TCAGGATTTTAGTAACAGATCCGAAC 58.960 38.462 10.96 0.00 40.88 3.95
4931 5836 6.019801 CAGGATTTTAGTAACAGATCCGAACG 60.020 42.308 10.96 0.00 40.88 3.95
4932 5837 6.038356 GGATTTTAGTAACAGATCCGAACGA 58.962 40.000 0.00 0.00 0.00 3.85
4933 5838 6.020041 GGATTTTAGTAACAGATCCGAACGAC 60.020 42.308 0.00 0.00 0.00 4.34
4934 5839 5.633830 TTTAGTAACAGATCCGAACGACT 57.366 39.130 0.00 0.00 0.00 4.18
4935 5840 3.761311 AGTAACAGATCCGAACGACTC 57.239 47.619 0.00 0.00 0.00 3.36
4936 5841 3.345414 AGTAACAGATCCGAACGACTCT 58.655 45.455 0.00 0.00 0.00 3.24
4937 5842 2.923605 AACAGATCCGAACGACTCTC 57.076 50.000 0.00 0.00 0.00 3.20
4938 5843 0.727970 ACAGATCCGAACGACTCTCG 59.272 55.000 0.00 0.00 46.93 4.04
4950 5855 3.546002 CGACTCTCGTCTTCACTCTTT 57.454 47.619 0.00 0.00 38.03 2.52
4951 5856 3.484683 CGACTCTCGTCTTCACTCTTTC 58.515 50.000 0.00 0.00 38.03 2.62
4952 5857 3.668491 CGACTCTCGTCTTCACTCTTTCC 60.668 52.174 0.00 0.00 38.03 3.13
4953 5858 2.559231 ACTCTCGTCTTCACTCTTTCCC 59.441 50.000 0.00 0.00 0.00 3.97
4954 5859 2.558795 CTCTCGTCTTCACTCTTTCCCA 59.441 50.000 0.00 0.00 0.00 4.37
4955 5860 2.963101 TCTCGTCTTCACTCTTTCCCAA 59.037 45.455 0.00 0.00 0.00 4.12
4956 5861 3.578716 TCTCGTCTTCACTCTTTCCCAAT 59.421 43.478 0.00 0.00 0.00 3.16
4957 5862 4.040461 TCTCGTCTTCACTCTTTCCCAATT 59.960 41.667 0.00 0.00 0.00 2.32
4958 5863 4.714632 TCGTCTTCACTCTTTCCCAATTT 58.285 39.130 0.00 0.00 0.00 1.82
4959 5864 5.130350 TCGTCTTCACTCTTTCCCAATTTT 58.870 37.500 0.00 0.00 0.00 1.82
4960 5865 5.238650 TCGTCTTCACTCTTTCCCAATTTTC 59.761 40.000 0.00 0.00 0.00 2.29
4961 5866 5.452777 GTCTTCACTCTTTCCCAATTTTCG 58.547 41.667 0.00 0.00 0.00 3.46
4962 5867 5.008712 GTCTTCACTCTTTCCCAATTTTCGT 59.991 40.000 0.00 0.00 0.00 3.85
4963 5868 5.238650 TCTTCACTCTTTCCCAATTTTCGTC 59.761 40.000 0.00 0.00 0.00 4.20
4964 5869 4.714632 TCACTCTTTCCCAATTTTCGTCT 58.285 39.130 0.00 0.00 0.00 4.18
4965 5870 5.130350 TCACTCTTTCCCAATTTTCGTCTT 58.870 37.500 0.00 0.00 0.00 3.01
4966 5871 5.238650 TCACTCTTTCCCAATTTTCGTCTTC 59.761 40.000 0.00 0.00 0.00 2.87
4967 5872 4.519350 ACTCTTTCCCAATTTTCGTCTTCC 59.481 41.667 0.00 0.00 0.00 3.46
4968 5873 3.824443 TCTTTCCCAATTTTCGTCTTCCC 59.176 43.478 0.00 0.00 0.00 3.97
4969 5874 3.518992 TTCCCAATTTTCGTCTTCCCT 57.481 42.857 0.00 0.00 0.00 4.20
4970 5875 3.067684 TCCCAATTTTCGTCTTCCCTC 57.932 47.619 0.00 0.00 0.00 4.30
4971 5876 2.642807 TCCCAATTTTCGTCTTCCCTCT 59.357 45.455 0.00 0.00 0.00 3.69
4972 5877 3.073946 TCCCAATTTTCGTCTTCCCTCTT 59.926 43.478 0.00 0.00 0.00 2.85
4973 5878 3.826729 CCCAATTTTCGTCTTCCCTCTTT 59.173 43.478 0.00 0.00 0.00 2.52
4974 5879 4.082733 CCCAATTTTCGTCTTCCCTCTTTC 60.083 45.833 0.00 0.00 0.00 2.62
4975 5880 4.082733 CCAATTTTCGTCTTCCCTCTTTCC 60.083 45.833 0.00 0.00 0.00 3.13
4976 5881 4.642466 ATTTTCGTCTTCCCTCTTTCCT 57.358 40.909 0.00 0.00 0.00 3.36
4977 5882 3.402628 TTTCGTCTTCCCTCTTTCCTG 57.597 47.619 0.00 0.00 0.00 3.86
4978 5883 2.011122 TCGTCTTCCCTCTTTCCTGT 57.989 50.000 0.00 0.00 0.00 4.00
4979 5884 2.326428 TCGTCTTCCCTCTTTCCTGTT 58.674 47.619 0.00 0.00 0.00 3.16
4980 5885 2.704065 TCGTCTTCCCTCTTTCCTGTTT 59.296 45.455 0.00 0.00 0.00 2.83
4981 5886 3.135895 TCGTCTTCCCTCTTTCCTGTTTT 59.864 43.478 0.00 0.00 0.00 2.43
4982 5887 3.883489 CGTCTTCCCTCTTTCCTGTTTTT 59.117 43.478 0.00 0.00 0.00 1.94
4983 5888 4.023963 CGTCTTCCCTCTTTCCTGTTTTTC 60.024 45.833 0.00 0.00 0.00 2.29
4984 5889 5.133941 GTCTTCCCTCTTTCCTGTTTTTCT 58.866 41.667 0.00 0.00 0.00 2.52
4985 5890 5.009110 GTCTTCCCTCTTTCCTGTTTTTCTG 59.991 44.000 0.00 0.00 0.00 3.02
4986 5891 3.832527 TCCCTCTTTCCTGTTTTTCTGG 58.167 45.455 0.00 0.00 36.63 3.86
4987 5892 2.297315 CCCTCTTTCCTGTTTTTCTGGC 59.703 50.000 0.00 0.00 35.49 4.85
4988 5893 3.225940 CCTCTTTCCTGTTTTTCTGGCT 58.774 45.455 0.00 0.00 35.49 4.75
4989 5894 3.638627 CCTCTTTCCTGTTTTTCTGGCTT 59.361 43.478 0.00 0.00 35.49 4.35
4990 5895 4.100035 CCTCTTTCCTGTTTTTCTGGCTTT 59.900 41.667 0.00 0.00 35.49 3.51
4991 5896 5.009854 TCTTTCCTGTTTTTCTGGCTTTG 57.990 39.130 0.00 0.00 35.49 2.77
4992 5897 3.817709 TTCCTGTTTTTCTGGCTTTGG 57.182 42.857 0.00 0.00 35.49 3.28
4993 5898 2.038659 TCCTGTTTTTCTGGCTTTGGG 58.961 47.619 0.00 0.00 35.49 4.12
4994 5899 1.762370 CCTGTTTTTCTGGCTTTGGGT 59.238 47.619 0.00 0.00 0.00 4.51
4995 5900 2.170397 CCTGTTTTTCTGGCTTTGGGTT 59.830 45.455 0.00 0.00 0.00 4.11
4996 5901 3.370421 CCTGTTTTTCTGGCTTTGGGTTT 60.370 43.478 0.00 0.00 0.00 3.27
4997 5902 4.260985 CTGTTTTTCTGGCTTTGGGTTTT 58.739 39.130 0.00 0.00 0.00 2.43
4998 5903 4.657013 TGTTTTTCTGGCTTTGGGTTTTT 58.343 34.783 0.00 0.00 0.00 1.94
4999 5904 5.805728 TGTTTTTCTGGCTTTGGGTTTTTA 58.194 33.333 0.00 0.00 0.00 1.52
5000 5905 6.418946 TGTTTTTCTGGCTTTGGGTTTTTAT 58.581 32.000 0.00 0.00 0.00 1.40
5001 5906 6.887002 TGTTTTTCTGGCTTTGGGTTTTTATT 59.113 30.769 0.00 0.00 0.00 1.40
5002 5907 7.066404 TGTTTTTCTGGCTTTGGGTTTTTATTC 59.934 33.333 0.00 0.00 0.00 1.75
5003 5908 6.493189 TTTCTGGCTTTGGGTTTTTATTCT 57.507 33.333 0.00 0.00 0.00 2.40
5004 5909 7.604657 TTTCTGGCTTTGGGTTTTTATTCTA 57.395 32.000 0.00 0.00 0.00 2.10
5005 5910 7.790782 TTCTGGCTTTGGGTTTTTATTCTAT 57.209 32.000 0.00 0.00 0.00 1.98
5006 5911 7.404671 TCTGGCTTTGGGTTTTTATTCTATC 57.595 36.000 0.00 0.00 0.00 2.08
5007 5912 6.094881 TCTGGCTTTGGGTTTTTATTCTATCG 59.905 38.462 0.00 0.00 0.00 2.92
5008 5913 5.126384 TGGCTTTGGGTTTTTATTCTATCGG 59.874 40.000 0.00 0.00 0.00 4.18
5009 5914 5.126545 GGCTTTGGGTTTTTATTCTATCGGT 59.873 40.000 0.00 0.00 0.00 4.69
5010 5915 6.319405 GGCTTTGGGTTTTTATTCTATCGGTA 59.681 38.462 0.00 0.00 0.00 4.02
5011 5916 7.415229 GCTTTGGGTTTTTATTCTATCGGTAG 58.585 38.462 0.00 0.00 0.00 3.18
5012 5917 7.066645 GCTTTGGGTTTTTATTCTATCGGTAGT 59.933 37.037 1.93 0.00 0.00 2.73
5013 5918 9.603921 CTTTGGGTTTTTATTCTATCGGTAGTA 57.396 33.333 1.93 0.00 0.00 1.82
5014 5919 9.956640 TTTGGGTTTTTATTCTATCGGTAGTAA 57.043 29.630 1.93 0.00 0.00 2.24
5021 5926 9.563748 TTTTATTCTATCGGTAGTAATTTGGGG 57.436 33.333 1.93 0.00 0.00 4.96
5022 5927 6.758806 ATTCTATCGGTAGTAATTTGGGGT 57.241 37.500 1.93 0.00 0.00 4.95
5023 5928 5.796424 TCTATCGGTAGTAATTTGGGGTC 57.204 43.478 1.93 0.00 0.00 4.46
5024 5929 5.210430 TCTATCGGTAGTAATTTGGGGTCA 58.790 41.667 1.93 0.00 0.00 4.02
5025 5930 3.899052 TCGGTAGTAATTTGGGGTCAG 57.101 47.619 0.00 0.00 0.00 3.51
5026 5931 3.443052 TCGGTAGTAATTTGGGGTCAGA 58.557 45.455 0.00 0.00 0.00 3.27
5027 5932 3.449737 TCGGTAGTAATTTGGGGTCAGAG 59.550 47.826 0.00 0.00 0.00 3.35
5028 5933 3.542648 GGTAGTAATTTGGGGTCAGAGC 58.457 50.000 0.00 0.00 0.00 4.09
5029 5934 2.808906 AGTAATTTGGGGTCAGAGCC 57.191 50.000 10.51 10.51 34.31 4.70
5030 5935 1.992557 AGTAATTTGGGGTCAGAGCCA 59.007 47.619 20.48 3.95 37.54 4.75
5045 5950 1.901464 GCCAAAAGGCCCTTCGTGA 60.901 57.895 0.00 0.00 0.00 4.35
5068 5973 8.088981 GTGAAGGAAAGTAGTGATTTGTAGAGA 58.911 37.037 0.00 0.00 0.00 3.10
5177 6083 4.576463 CCAACACTTTCCATGCTAGATACC 59.424 45.833 0.00 0.00 0.00 2.73
5198 6104 1.074084 TCATAGGCGGTTCCCAAACAA 59.926 47.619 0.00 0.00 37.10 2.83
5278 6185 1.930520 GGGTGCCCTCCATACCAAT 59.069 57.895 0.00 0.00 36.19 3.16
5376 6284 0.812549 TGCCGTACTCTCGTGCAATA 59.187 50.000 0.00 0.00 35.45 1.90
5388 6296 6.311445 ACTCTCGTGCAATAACAAGTGAATAG 59.689 38.462 0.00 0.00 0.00 1.73
5391 6299 5.061684 TCGTGCAATAACAAGTGAATAGACG 59.938 40.000 0.00 0.00 0.00 4.18
5547 6455 9.453572 CAGCATGAAAATACCACATATAGGTAT 57.546 33.333 11.44 11.44 46.31 2.73
5573 6481 3.074412 AGTGGACTCATAAGGCAAAACG 58.926 45.455 0.00 0.00 28.86 3.60
5592 6500 4.906065 ACGGGTTTAAAGAGTTTTGGAC 57.094 40.909 0.00 0.00 0.00 4.02
5654 6564 4.023707 AGCAAAAAGATTGAGAAGTGACCG 60.024 41.667 0.00 0.00 0.00 4.79
5661 6571 2.526304 TGAGAAGTGACCGACCAAAG 57.474 50.000 0.00 0.00 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.393646 AGGACCTAGGACTCATTGAGC 58.606 52.381 17.98 6.57 32.04 4.26
1 2 7.093552 CCATATTAGGACCTAGGACTCATTGAG 60.094 44.444 17.98 12.17 35.52 3.02
2 3 6.726299 CCATATTAGGACCTAGGACTCATTGA 59.274 42.308 17.98 0.00 0.00 2.57
3 4 6.498651 ACCATATTAGGACCTAGGACTCATTG 59.501 42.308 17.98 10.26 0.00 2.82
4 5 6.635021 ACCATATTAGGACCTAGGACTCATT 58.365 40.000 17.98 4.61 0.00 2.57
5 6 6.234404 ACCATATTAGGACCTAGGACTCAT 57.766 41.667 17.98 12.16 0.00 2.90
6 7 5.681494 ACCATATTAGGACCTAGGACTCA 57.319 43.478 17.98 5.19 0.00 3.41
7 8 5.279556 GCAACCATATTAGGACCTAGGACTC 60.280 48.000 17.98 2.83 0.00 3.36
8 9 4.593634 GCAACCATATTAGGACCTAGGACT 59.406 45.833 17.98 15.37 0.00 3.85
9 10 4.262938 GGCAACCATATTAGGACCTAGGAC 60.263 50.000 17.98 9.70 0.00 3.85
10 11 3.908103 GGCAACCATATTAGGACCTAGGA 59.092 47.826 17.98 0.00 0.00 2.94
11 12 4.287766 GGCAACCATATTAGGACCTAGG 57.712 50.000 7.41 7.41 0.00 3.02
31 32 5.506483 CGATCACGATTATCTAGCCTATGGG 60.506 48.000 0.00 0.00 42.66 4.00
32 33 5.066634 ACGATCACGATTATCTAGCCTATGG 59.933 44.000 0.00 0.00 42.66 2.74
33 34 6.125327 ACGATCACGATTATCTAGCCTATG 57.875 41.667 0.00 0.00 42.66 2.23
34 35 6.761099 AACGATCACGATTATCTAGCCTAT 57.239 37.500 0.00 0.00 42.66 2.57
35 36 6.570672 AAACGATCACGATTATCTAGCCTA 57.429 37.500 0.00 0.00 42.66 3.93
36 37 5.455056 AAACGATCACGATTATCTAGCCT 57.545 39.130 0.00 0.00 42.66 4.58
37 38 5.690409 TCAAAACGATCACGATTATCTAGCC 59.310 40.000 0.00 0.00 42.66 3.93
38 39 6.749216 TCAAAACGATCACGATTATCTAGC 57.251 37.500 0.00 0.00 42.66 3.42
39 40 7.382488 ACCATCAAAACGATCACGATTATCTAG 59.618 37.037 0.00 0.00 42.66 2.43
40 41 7.207383 ACCATCAAAACGATCACGATTATCTA 58.793 34.615 0.00 0.00 42.66 1.98
41 42 6.049149 ACCATCAAAACGATCACGATTATCT 58.951 36.000 0.00 0.00 42.66 1.98
42 43 6.287107 ACCATCAAAACGATCACGATTATC 57.713 37.500 0.00 0.00 42.66 1.75
43 44 6.984474 ACTACCATCAAAACGATCACGATTAT 59.016 34.615 0.00 0.00 42.66 1.28
44 45 6.254804 CACTACCATCAAAACGATCACGATTA 59.745 38.462 0.00 0.00 42.66 1.75
45 46 5.063438 CACTACCATCAAAACGATCACGATT 59.937 40.000 0.00 0.00 42.66 3.34
46 47 4.566759 CACTACCATCAAAACGATCACGAT 59.433 41.667 0.00 0.00 42.66 3.73
47 48 3.924073 CACTACCATCAAAACGATCACGA 59.076 43.478 0.00 0.00 42.66 4.35
48 49 3.483574 GCACTACCATCAAAACGATCACG 60.484 47.826 0.00 0.00 45.75 4.35
49 50 3.684788 AGCACTACCATCAAAACGATCAC 59.315 43.478 0.00 0.00 29.21 3.06
50 51 3.684305 CAGCACTACCATCAAAACGATCA 59.316 43.478 0.00 0.00 29.21 2.92
51 52 3.485877 GCAGCACTACCATCAAAACGATC 60.486 47.826 0.00 0.00 29.21 3.69
52 53 2.420022 GCAGCACTACCATCAAAACGAT 59.580 45.455 0.00 0.00 33.27 3.73
53 54 1.804151 GCAGCACTACCATCAAAACGA 59.196 47.619 0.00 0.00 0.00 3.85
54 55 1.135689 GGCAGCACTACCATCAAAACG 60.136 52.381 0.00 0.00 0.00 3.60
55 56 2.095059 CAGGCAGCACTACCATCAAAAC 60.095 50.000 0.00 0.00 0.00 2.43
56 57 2.161855 CAGGCAGCACTACCATCAAAA 58.838 47.619 0.00 0.00 0.00 2.44
57 58 1.073763 ACAGGCAGCACTACCATCAAA 59.926 47.619 0.00 0.00 0.00 2.69
58 59 0.692476 ACAGGCAGCACTACCATCAA 59.308 50.000 0.00 0.00 0.00 2.57
59 60 0.692476 AACAGGCAGCACTACCATCA 59.308 50.000 0.00 0.00 0.00 3.07
60 61 1.089920 CAACAGGCAGCACTACCATC 58.910 55.000 0.00 0.00 0.00 3.51
61 62 0.322816 CCAACAGGCAGCACTACCAT 60.323 55.000 0.00 0.00 0.00 3.55
62 63 1.073025 CCAACAGGCAGCACTACCA 59.927 57.895 0.00 0.00 0.00 3.25
63 64 0.537371 AACCAACAGGCAGCACTACC 60.537 55.000 0.00 0.00 0.00 3.18
64 65 0.593128 CAACCAACAGGCAGCACTAC 59.407 55.000 0.00 0.00 0.00 2.73
65 66 1.172180 GCAACCAACAGGCAGCACTA 61.172 55.000 0.00 0.00 0.00 2.74
66 67 2.492773 GCAACCAACAGGCAGCACT 61.493 57.895 0.00 0.00 0.00 4.40
67 68 2.028043 GCAACCAACAGGCAGCAC 59.972 61.111 0.00 0.00 0.00 4.40
68 69 3.594775 CGCAACCAACAGGCAGCA 61.595 61.111 0.00 0.00 0.00 4.41
70 71 4.347453 GGCGCAACCAACAGGCAG 62.347 66.667 10.83 0.00 38.86 4.85
79 80 0.797542 TATAAACACGTGGCGCAACC 59.202 50.000 21.57 0.00 39.84 3.77
80 81 2.817538 ATATAAACACGTGGCGCAAC 57.182 45.000 21.57 7.52 0.00 4.17
81 82 2.484651 ACAATATAAACACGTGGCGCAA 59.515 40.909 21.57 0.00 0.00 4.85
82 83 2.077627 ACAATATAAACACGTGGCGCA 58.922 42.857 21.57 1.97 0.00 6.09
83 84 2.817538 ACAATATAAACACGTGGCGC 57.182 45.000 21.57 0.00 0.00 6.53
84 85 5.398176 ACATACAATATAAACACGTGGCG 57.602 39.130 21.57 0.00 0.00 5.69
85 86 7.008810 CCAAAACATACAATATAAACACGTGGC 59.991 37.037 21.57 0.00 0.00 5.01
86 87 8.237949 TCCAAAACATACAATATAAACACGTGG 58.762 33.333 21.57 1.23 0.00 4.94
87 88 9.781834 ATCCAAAACATACAATATAAACACGTG 57.218 29.630 15.48 15.48 0.00 4.49
98 99 8.902806 CACTGGTACATATCCAAAACATACAAT 58.097 33.333 0.00 0.00 38.20 2.71
99 100 7.338196 CCACTGGTACATATCCAAAACATACAA 59.662 37.037 0.00 0.00 38.20 2.41
100 101 6.826231 CCACTGGTACATATCCAAAACATACA 59.174 38.462 0.00 0.00 38.20 2.29
101 102 7.012044 GTCCACTGGTACATATCCAAAACATAC 59.988 40.741 0.00 0.00 38.20 2.39
102 103 7.051623 GTCCACTGGTACATATCCAAAACATA 58.948 38.462 0.00 0.00 38.20 2.29
103 104 5.885912 GTCCACTGGTACATATCCAAAACAT 59.114 40.000 0.00 0.00 38.20 2.71
104 105 5.221945 TGTCCACTGGTACATATCCAAAACA 60.222 40.000 0.00 0.00 38.20 2.83
105 106 5.250200 TGTCCACTGGTACATATCCAAAAC 58.750 41.667 0.00 0.00 38.20 2.43
106 107 5.013704 ACTGTCCACTGGTACATATCCAAAA 59.986 40.000 0.00 0.00 38.20 2.44
107 108 4.534500 ACTGTCCACTGGTACATATCCAAA 59.466 41.667 0.00 0.00 38.20 3.28
108 109 4.101114 ACTGTCCACTGGTACATATCCAA 58.899 43.478 0.00 0.00 38.20 3.53
109 110 3.719871 ACTGTCCACTGGTACATATCCA 58.280 45.455 0.00 0.00 38.20 3.41
110 111 5.864418 TTACTGTCCACTGGTACATATCC 57.136 43.478 0.00 0.00 38.20 2.59
111 112 6.267928 AGGATTACTGTCCACTGGTACATATC 59.732 42.308 0.00 3.30 40.90 1.63
112 113 6.143915 AGGATTACTGTCCACTGGTACATAT 58.856 40.000 0.00 0.00 40.90 1.78
113 114 5.525484 AGGATTACTGTCCACTGGTACATA 58.475 41.667 0.00 0.00 40.90 2.29
114 115 4.362677 AGGATTACTGTCCACTGGTACAT 58.637 43.478 0.00 0.00 40.90 2.29
115 116 3.786553 AGGATTACTGTCCACTGGTACA 58.213 45.455 0.00 0.00 40.90 2.90
116 117 6.481434 AATAGGATTACTGTCCACTGGTAC 57.519 41.667 0.00 0.00 40.90 3.34
117 118 7.359849 AGTAATAGGATTACTGTCCACTGGTA 58.640 38.462 10.36 0.00 40.90 3.25
118 119 6.203072 AGTAATAGGATTACTGTCCACTGGT 58.797 40.000 10.36 0.00 40.90 4.00
119 120 6.239345 GGAGTAATAGGATTACTGTCCACTGG 60.239 46.154 14.91 0.00 40.90 4.00
120 121 6.239345 GGGAGTAATAGGATTACTGTCCACTG 60.239 46.154 14.91 0.00 40.90 3.66
121 122 5.839606 GGGAGTAATAGGATTACTGTCCACT 59.160 44.000 14.91 0.00 40.90 4.00
122 123 5.839606 AGGGAGTAATAGGATTACTGTCCAC 59.160 44.000 14.91 4.27 40.90 4.02
123 124 6.039415 AGGGAGTAATAGGATTACTGTCCA 57.961 41.667 14.91 0.00 40.90 4.02
124 125 5.481122 GGAGGGAGTAATAGGATTACTGTCC 59.519 48.000 14.91 14.65 35.54 4.02
125 126 5.183522 CGGAGGGAGTAATAGGATTACTGTC 59.816 48.000 14.91 9.33 35.54 3.51
126 127 5.078256 CGGAGGGAGTAATAGGATTACTGT 58.922 45.833 14.91 2.10 35.54 3.55
127 128 5.078256 ACGGAGGGAGTAATAGGATTACTG 58.922 45.833 14.91 4.29 35.54 2.74
128 129 5.323581 GACGGAGGGAGTAATAGGATTACT 58.676 45.833 10.85 10.85 37.89 2.24
129 130 4.462132 GGACGGAGGGAGTAATAGGATTAC 59.538 50.000 1.82 1.82 0.00 1.89
130 131 4.670765 GGACGGAGGGAGTAATAGGATTA 58.329 47.826 0.00 0.00 0.00 1.75
131 132 3.508426 GGACGGAGGGAGTAATAGGATT 58.492 50.000 0.00 0.00 0.00 3.01
132 133 2.554785 CGGACGGAGGGAGTAATAGGAT 60.555 54.545 0.00 0.00 0.00 3.24
133 134 1.202855 CGGACGGAGGGAGTAATAGGA 60.203 57.143 0.00 0.00 0.00 2.94
134 135 1.202855 TCGGACGGAGGGAGTAATAGG 60.203 57.143 0.00 0.00 0.00 2.57
135 136 2.267174 TCGGACGGAGGGAGTAATAG 57.733 55.000 0.00 0.00 0.00 1.73
136 137 2.734755 TTCGGACGGAGGGAGTAATA 57.265 50.000 0.00 0.00 0.00 0.98
137 138 1.856629 TTTCGGACGGAGGGAGTAAT 58.143 50.000 0.00 0.00 0.00 1.89
138 139 1.631405 TTTTCGGACGGAGGGAGTAA 58.369 50.000 0.00 0.00 0.00 2.24
139 140 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
140 141 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
141 142 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
142 143 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
143 144 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
144 145 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
145 146 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
146 147 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
147 148 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
148 149 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
149 150 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
150 151 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
151 152 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
152 153 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
159 160 9.918630 CTCTTTTTATCCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
215 216 9.657419 GTCATCAAAATGAATAAAAAGGGATGT 57.343 29.630 0.00 0.00 43.42 3.06
216 217 9.656040 TGTCATCAAAATGAATAAAAAGGGATG 57.344 29.630 0.00 0.00 43.42 3.51
218 219 9.709495 CTTGTCATCAAAATGAATAAAAAGGGA 57.291 29.630 0.00 0.00 43.42 4.20
219 220 9.492973 ACTTGTCATCAAAATGAATAAAAAGGG 57.507 29.630 0.00 0.00 43.42 3.95
227 228 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
228 229 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
229 230 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
230 231 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
231 232 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
232 233 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
233 234 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
234 235 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
235 236 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
236 237 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
237 238 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
238 239 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
239 240 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
240 241 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
241 242 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
242 243 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
243 244 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
244 245 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
245 246 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
246 247 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
247 248 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
248 249 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
249 250 0.846015 TAATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
250 251 1.544691 CATAATACTCCCTCCGTCCGG 59.455 57.143 0.00 0.00 0.00 5.14
251 252 1.544691 CCATAATACTCCCTCCGTCCG 59.455 57.143 0.00 0.00 0.00 4.79
252 253 2.885616 TCCATAATACTCCCTCCGTCC 58.114 52.381 0.00 0.00 0.00 4.79
253 254 6.600882 TTATTCCATAATACTCCCTCCGTC 57.399 41.667 0.00 0.00 0.00 4.79
254 255 7.072076 AGTTTTATTCCATAATACTCCCTCCGT 59.928 37.037 0.00 0.00 33.61 4.69
255 256 7.450903 AGTTTTATTCCATAATACTCCCTCCG 58.549 38.462 0.00 0.00 33.61 4.63
300 301 8.792830 TCTTCGATGAAGAAAATGGAAGTATT 57.207 30.769 6.78 0.00 44.37 1.89
320 321 2.531508 GCAAAGCTGTGTGTTTTCTTCG 59.468 45.455 5.61 0.00 0.00 3.79
329 330 7.410728 CCGAAAAATAATAAGCAAAGCTGTGTG 60.411 37.037 5.61 0.00 39.62 3.82
410 412 2.680312 TTGTGTCCAGATGCTAGAGC 57.320 50.000 0.00 0.00 42.50 4.09
411 413 4.669206 AGATTGTGTCCAGATGCTAGAG 57.331 45.455 0.00 0.00 0.00 2.43
412 414 6.737720 AATAGATTGTGTCCAGATGCTAGA 57.262 37.500 0.00 0.00 0.00 2.43
437 439 2.866762 GTGTATCTTTGCTAGCGGAAGG 59.133 50.000 22.84 9.83 0.00 3.46
495 497 7.872483 CAGATTGGTTTGTGCCTATAAGTTTTT 59.128 33.333 0.00 0.00 0.00 1.94
496 498 7.378181 CAGATTGGTTTGTGCCTATAAGTTTT 58.622 34.615 0.00 0.00 0.00 2.43
542 544 8.918202 TGGGATCGTTGCTTATATCTTTTAAT 57.082 30.769 0.00 0.00 0.00 1.40
543 545 8.783093 CATGGGATCGTTGCTTATATCTTTTAA 58.217 33.333 0.00 0.00 0.00 1.52
544 546 7.390440 CCATGGGATCGTTGCTTATATCTTTTA 59.610 37.037 2.85 0.00 0.00 1.52
546 548 5.707298 CCATGGGATCGTTGCTTATATCTTT 59.293 40.000 2.85 0.00 0.00 2.52
549 551 3.375299 GCCATGGGATCGTTGCTTATATC 59.625 47.826 15.13 0.00 0.00 1.63
550 552 3.347216 GCCATGGGATCGTTGCTTATAT 58.653 45.455 15.13 0.00 0.00 0.86
551 553 2.778299 GCCATGGGATCGTTGCTTATA 58.222 47.619 15.13 0.00 0.00 0.98
552 554 1.609208 GCCATGGGATCGTTGCTTAT 58.391 50.000 15.13 0.00 0.00 1.73
554 556 2.114670 CGCCATGGGATCGTTGCTT 61.115 57.895 15.13 0.00 0.00 3.91
555 557 2.514592 CGCCATGGGATCGTTGCT 60.515 61.111 15.13 0.00 0.00 3.91
556 558 3.585990 CCGCCATGGGATCGTTGC 61.586 66.667 15.13 0.00 0.00 4.17
557 559 1.889105 CTCCGCCATGGGATCGTTG 60.889 63.158 15.13 0.04 38.76 4.10
558 560 2.032860 CTCTCCGCCATGGGATCGTT 62.033 60.000 15.13 0.00 38.76 3.85
582 716 1.003839 GGCTCAATGGACACACGGA 60.004 57.895 0.00 0.00 0.00 4.69
676 810 1.032794 TATCGGCCTCTGCACAGTAG 58.967 55.000 0.00 0.00 40.13 2.57
680 814 3.324846 AGAATTATATCGGCCTCTGCACA 59.675 43.478 0.00 0.00 40.13 4.57
701 835 9.347240 ACTCATATGAACATTATTTCAAGGGAG 57.653 33.333 6.90 0.00 38.95 4.30
727 862 7.595875 CACAAATAAAACTCATTGCATGTGAGA 59.404 33.333 27.02 11.82 44.57 3.27
1010 1188 1.385528 GTGTGGTCTTTGGTTTCGGT 58.614 50.000 0.00 0.00 0.00 4.69
1034 1212 3.735237 ATATCTGAGAAATGTCGCGGT 57.265 42.857 6.13 0.00 32.19 5.68
1047 1252 3.706055 GCAGGGGCGAAATATCTGA 57.294 52.632 0.00 0.00 0.00 3.27
1083 1314 1.745489 CGGCGGGAAAGGAAGGAAG 60.745 63.158 0.00 0.00 0.00 3.46
1084 1315 2.349755 CGGCGGGAAAGGAAGGAA 59.650 61.111 0.00 0.00 0.00 3.36
1085 1316 4.404098 GCGGCGGGAAAGGAAGGA 62.404 66.667 9.78 0.00 0.00 3.36
1086 1317 4.715523 TGCGGCGGGAAAGGAAGG 62.716 66.667 9.78 0.00 0.00 3.46
1087 1318 1.595093 AATTGCGGCGGGAAAGGAAG 61.595 55.000 9.78 0.00 0.00 3.46
1088 1319 1.605165 AATTGCGGCGGGAAAGGAA 60.605 52.632 9.78 0.00 0.00 3.36
1089 1320 2.034999 AATTGCGGCGGGAAAGGA 59.965 55.556 9.78 0.00 0.00 3.36
1090 1321 2.181525 CAATTGCGGCGGGAAAGG 59.818 61.111 9.78 0.00 0.00 3.11
1091 1322 2.506881 GCAATTGCGGCGGGAAAG 60.507 61.111 15.87 0.00 0.00 2.62
1227 1464 3.325201 GAACGGAGGAATGGGCGGT 62.325 63.158 0.00 0.00 0.00 5.68
1258 1495 1.168714 ATCAAAGCAGCCGGAGAAAC 58.831 50.000 5.05 0.00 0.00 2.78
1270 1507 2.000429 ATGCGGCAAGAAATCAAAGC 58.000 45.000 6.82 0.00 0.00 3.51
1360 1643 5.521906 AATAGCATACACATGTCGTCTCT 57.478 39.130 0.00 0.00 34.40 3.10
1419 1705 6.329496 TGACACCAACAAAGAAACAAGAATC 58.671 36.000 0.00 0.00 0.00 2.52
1763 2069 9.021807 TGTCTTAATATTAGCGCTTACTCCTAT 57.978 33.333 18.68 0.00 0.00 2.57
1792 2099 2.826128 GTCATGTTCTTTTTCCCCTCCC 59.174 50.000 0.00 0.00 0.00 4.30
1800 2107 4.043750 CACGCATGTGTCATGTTCTTTTT 58.956 39.130 9.44 0.00 41.34 1.94
1914 2231 4.199310 ACCGTGATGATTATGAACCAAGG 58.801 43.478 0.00 0.00 0.00 3.61
1918 2235 2.221055 GCGACCGTGATGATTATGAACC 59.779 50.000 0.00 0.00 0.00 3.62
1924 2241 3.786516 TTACTGCGACCGTGATGATTA 57.213 42.857 0.00 0.00 0.00 1.75
1939 2256 7.649306 GGAACATAATTTAGCTGGCAATTACTG 59.351 37.037 0.00 6.24 29.66 2.74
1984 2320 5.048782 CAGCAAAACATACTAGGAAACAGCA 60.049 40.000 0.00 0.00 0.00 4.41
1993 2329 7.761409 TCTAAAATGCCAGCAAAACATACTAG 58.239 34.615 0.00 0.00 0.00 2.57
2063 2430 2.109774 GATGGGGAATTCACATTGGCA 58.890 47.619 10.48 0.00 0.00 4.92
2064 2431 2.391678 AGATGGGGAATTCACATTGGC 58.608 47.619 10.48 1.52 0.00 4.52
2133 2500 3.928005 TCTATCCTGTGACGAGGTAGT 57.072 47.619 0.00 0.00 34.36 2.73
2156 2606 4.961511 GCCGTGGCTGTGTCGTCA 62.962 66.667 2.98 0.00 38.26 4.35
2265 2720 1.369625 GAAGGGTCGATCGCAACAAT 58.630 50.000 11.09 0.00 0.00 2.71
2357 2920 2.359169 TTGGAGCTAGCGACAGGGG 61.359 63.158 9.55 0.00 0.00 4.79
2428 3029 2.606272 CGAGGTTAAGGTTTATCCGTGC 59.394 50.000 0.00 0.00 41.99 5.34
2432 3033 2.207590 CGGCGAGGTTAAGGTTTATCC 58.792 52.381 0.00 0.00 0.00 2.59
2503 3138 3.040795 GTTTTTCTTTCGCCCTTCGTTC 58.959 45.455 0.00 0.00 39.67 3.95
2504 3139 2.540157 CGTTTTTCTTTCGCCCTTCGTT 60.540 45.455 0.00 0.00 39.67 3.85
2505 3140 1.003223 CGTTTTTCTTTCGCCCTTCGT 60.003 47.619 0.00 0.00 39.67 3.85
2508 3143 2.294979 ACTCGTTTTTCTTTCGCCCTT 58.705 42.857 0.00 0.00 0.00 3.95
2511 3146 2.787129 CCAAACTCGTTTTTCTTTCGCC 59.213 45.455 0.00 0.00 0.00 5.54
2556 3294 3.932089 CCAACCAAGACCAAACAAAACAG 59.068 43.478 0.00 0.00 0.00 3.16
2588 3331 1.382695 TAGGCAGGTGCTACCCCTC 60.383 63.158 1.26 0.00 39.75 4.30
2598 3341 0.984995 GAGGTTCCAACTAGGCAGGT 59.015 55.000 0.00 0.00 37.29 4.00
2622 3379 1.369692 GACGACACATGTGGGTGGA 59.630 57.895 28.64 0.00 43.08 4.02
2680 3437 2.422479 CGAGTAGTACCAAGTAGCAGCA 59.578 50.000 0.00 0.00 0.00 4.41
2684 3441 2.022934 AGGCGAGTAGTACCAAGTAGC 58.977 52.381 0.00 0.00 0.00 3.58
2716 3476 4.209080 CCACGAGAATTTGCTTTGTTTTCC 59.791 41.667 0.00 0.00 0.00 3.13
2806 3578 7.653311 TCCATTCGCCATCATCGAAATATATAG 59.347 37.037 1.95 0.00 46.93 1.31
2810 3582 4.393062 GTCCATTCGCCATCATCGAAATAT 59.607 41.667 1.95 0.00 46.93 1.28
3202 3994 1.886542 GATTTCAACGGGACAAAGCCT 59.113 47.619 0.00 0.00 0.00 4.58
3269 4075 1.735360 CCACAGCCCACAACACAAG 59.265 57.895 0.00 0.00 0.00 3.16
3270 4076 1.756172 CCCACAGCCCACAACACAA 60.756 57.895 0.00 0.00 0.00 3.33
3275 4081 1.228521 CATGTCCCACAGCCCACAA 60.229 57.895 0.00 0.00 0.00 3.33
3332 4161 2.960384 CTGGCCTTTGGAATGCATCATA 59.040 45.455 3.32 0.00 0.00 2.15
3349 4178 3.093278 CATCGACCTTTCGCTGGC 58.907 61.111 0.00 0.00 45.46 4.85
3441 4271 2.198304 GAGCACCTCCGGAACCCAAT 62.198 60.000 5.23 0.00 0.00 3.16
3479 4309 3.684413 GCCCTCCCGTCATTTCTTAATGA 60.684 47.826 0.00 0.00 45.99 2.57
3697 4557 5.205565 CGCTTCTCCTAACTTTTGTCAAAC 58.794 41.667 0.00 0.00 0.00 2.93
3775 4651 6.299922 ACCAGAGTAGATTGATCTCGACATA 58.700 40.000 0.00 0.00 38.32 2.29
3796 4672 6.724263 CGAGCATGCATAAAAATTACTACCA 58.276 36.000 21.98 0.00 0.00 3.25
3840 4735 1.680735 TGCACGCCAGAATGAAGTTTT 59.319 42.857 0.00 0.00 39.69 2.43
3847 4742 4.170062 CCGCTGCACGCCAGAATG 62.170 66.667 7.77 0.00 44.64 2.67
4038 4933 1.144936 GGAGAAGTGGCGGATGAGG 59.855 63.158 0.00 0.00 0.00 3.86
4138 5033 4.980805 GTTGCAGTGGCCGACGGA 62.981 66.667 20.50 0.00 40.13 4.69
4142 5037 4.947147 GGGTGTTGCAGTGGCCGA 62.947 66.667 0.00 0.00 40.13 5.54
4184 5079 4.335647 AGAGCTGCGTGTTGGGGG 62.336 66.667 0.00 0.00 0.00 5.40
4212 5107 8.025445 AGACATGAGTTCAATTTGTTTAGATGC 58.975 33.333 0.00 0.00 0.00 3.91
4293 5188 2.657237 CGACACGGCCTCCTTCTT 59.343 61.111 0.00 0.00 0.00 2.52
4304 5199 4.657824 ACCACCGAAGCCGACACG 62.658 66.667 0.00 0.00 38.22 4.49
4434 5332 3.048563 AGCAGCACTGAGAGTCTCA 57.951 52.632 21.46 21.46 38.25 3.27
4465 5363 1.670811 CCTCGGCAACATACATTCCAC 59.329 52.381 0.00 0.00 0.00 4.02
4707 5606 4.954202 ACTAGTATTACAGTGCAGGCAGTA 59.046 41.667 0.56 0.00 0.00 2.74
4708 5607 3.769844 ACTAGTATTACAGTGCAGGCAGT 59.230 43.478 0.00 0.00 0.00 4.40
4709 5608 4.392921 ACTAGTATTACAGTGCAGGCAG 57.607 45.455 0.00 0.00 0.00 4.85
4710 5609 4.202121 GCTACTAGTATTACAGTGCAGGCA 60.202 45.833 2.33 0.00 0.00 4.75
4711 5610 4.202121 TGCTACTAGTATTACAGTGCAGGC 60.202 45.833 2.33 0.00 30.62 4.85
4712 5611 5.515797 TGCTACTAGTATTACAGTGCAGG 57.484 43.478 2.33 0.00 30.62 4.85
4713 5612 7.036220 ACTTTGCTACTAGTATTACAGTGCAG 58.964 38.462 2.33 0.33 33.52 4.41
4714 5613 6.931838 ACTTTGCTACTAGTATTACAGTGCA 58.068 36.000 2.33 4.90 31.54 4.57
4715 5614 8.969267 CATACTTTGCTACTAGTATTACAGTGC 58.031 37.037 2.33 2.17 35.85 4.40
4742 5647 5.536161 AGTTTGTTGCTATGTGGACAAATCT 59.464 36.000 4.14 2.04 42.04 2.40
4832 5737 8.770828 CGATGGTTTCTTAATGTATAACCGATT 58.229 33.333 0.00 0.00 40.83 3.34
4835 5740 6.702723 TCCGATGGTTTCTTAATGTATAACCG 59.297 38.462 0.00 0.00 40.83 4.44
4851 5756 2.752903 GCTTTGGTTGTATCCGATGGTT 59.247 45.455 0.00 0.00 0.00 3.67
4853 5758 2.364632 TGCTTTGGTTGTATCCGATGG 58.635 47.619 0.00 0.00 0.00 3.51
4860 5765 8.372459 TCCGTATAGATATTGCTTTGGTTGTAT 58.628 33.333 0.00 0.00 0.00 2.29
4861 5766 7.728148 TCCGTATAGATATTGCTTTGGTTGTA 58.272 34.615 0.00 0.00 0.00 2.41
4862 5767 6.588204 TCCGTATAGATATTGCTTTGGTTGT 58.412 36.000 0.00 0.00 0.00 3.32
4880 5785 5.878669 AGTCCGAATTTTAGCTTTTCCGTAT 59.121 36.000 0.00 0.00 0.00 3.06
4883 5788 4.680171 AGTCCGAATTTTAGCTTTTCCG 57.320 40.909 0.00 0.00 0.00 4.30
4884 5789 6.009115 TGAAGTCCGAATTTTAGCTTTTCC 57.991 37.500 0.00 0.00 0.00 3.13
4885 5790 6.072673 TCCTGAAGTCCGAATTTTAGCTTTTC 60.073 38.462 0.00 0.00 0.00 2.29
4886 5791 5.768164 TCCTGAAGTCCGAATTTTAGCTTTT 59.232 36.000 0.00 0.00 0.00 2.27
4887 5792 5.313712 TCCTGAAGTCCGAATTTTAGCTTT 58.686 37.500 0.00 0.00 0.00 3.51
4888 5793 4.906618 TCCTGAAGTCCGAATTTTAGCTT 58.093 39.130 0.00 0.00 0.00 3.74
4889 5794 4.553330 TCCTGAAGTCCGAATTTTAGCT 57.447 40.909 0.00 0.00 0.00 3.32
4890 5795 5.819825 AATCCTGAAGTCCGAATTTTAGC 57.180 39.130 0.00 0.00 0.00 3.09
4891 5796 8.947115 ACTAAAATCCTGAAGTCCGAATTTTAG 58.053 33.333 17.40 17.40 41.90 1.85
4892 5797 8.857694 ACTAAAATCCTGAAGTCCGAATTTTA 57.142 30.769 0.00 0.00 0.00 1.52
4893 5798 7.761038 ACTAAAATCCTGAAGTCCGAATTTT 57.239 32.000 0.00 0.00 0.00 1.82
4894 5799 8.727910 GTTACTAAAATCCTGAAGTCCGAATTT 58.272 33.333 0.00 0.00 0.00 1.82
4895 5800 7.881232 TGTTACTAAAATCCTGAAGTCCGAATT 59.119 33.333 0.00 0.00 0.00 2.17
4896 5801 7.391620 TGTTACTAAAATCCTGAAGTCCGAAT 58.608 34.615 0.00 0.00 0.00 3.34
4897 5802 6.761312 TGTTACTAAAATCCTGAAGTCCGAA 58.239 36.000 0.00 0.00 0.00 4.30
4898 5803 6.209986 TCTGTTACTAAAATCCTGAAGTCCGA 59.790 38.462 0.00 0.00 0.00 4.55
4899 5804 6.395629 TCTGTTACTAAAATCCTGAAGTCCG 58.604 40.000 0.00 0.00 0.00 4.79
4900 5805 7.496263 GGATCTGTTACTAAAATCCTGAAGTCC 59.504 40.741 0.00 0.00 34.35 3.85
4901 5806 7.222999 CGGATCTGTTACTAAAATCCTGAAGTC 59.777 40.741 0.00 0.00 34.90 3.01
4902 5807 7.042335 CGGATCTGTTACTAAAATCCTGAAGT 58.958 38.462 0.00 0.00 34.90 3.01
4903 5808 7.265673 TCGGATCTGTTACTAAAATCCTGAAG 58.734 38.462 0.42 0.00 34.90 3.02
4904 5809 7.177832 TCGGATCTGTTACTAAAATCCTGAA 57.822 36.000 0.42 0.00 34.90 3.02
4905 5810 6.785337 TCGGATCTGTTACTAAAATCCTGA 57.215 37.500 0.42 0.00 34.90 3.86
4906 5811 6.019801 CGTTCGGATCTGTTACTAAAATCCTG 60.020 42.308 0.42 0.00 34.90 3.86
4907 5812 6.040878 CGTTCGGATCTGTTACTAAAATCCT 58.959 40.000 0.42 0.00 34.90 3.24
4908 5813 6.020041 GTCGTTCGGATCTGTTACTAAAATCC 60.020 42.308 0.42 0.00 33.93 3.01
4909 5814 6.750963 AGTCGTTCGGATCTGTTACTAAAATC 59.249 38.462 0.42 0.00 0.00 2.17
4910 5815 6.628185 AGTCGTTCGGATCTGTTACTAAAAT 58.372 36.000 0.42 0.00 0.00 1.82
4911 5816 6.017400 AGTCGTTCGGATCTGTTACTAAAA 57.983 37.500 0.42 0.00 0.00 1.52
4912 5817 5.413833 AGAGTCGTTCGGATCTGTTACTAAA 59.586 40.000 0.42 0.00 0.00 1.85
4913 5818 4.940046 AGAGTCGTTCGGATCTGTTACTAA 59.060 41.667 0.42 0.00 0.00 2.24
4914 5819 4.511527 AGAGTCGTTCGGATCTGTTACTA 58.488 43.478 0.42 0.00 0.00 1.82
4915 5820 3.345414 AGAGTCGTTCGGATCTGTTACT 58.655 45.455 0.42 1.45 0.00 2.24
4916 5821 3.682921 GAGAGTCGTTCGGATCTGTTAC 58.317 50.000 0.42 0.81 0.00 2.50
4917 5822 2.350804 CGAGAGTCGTTCGGATCTGTTA 59.649 50.000 0.42 0.00 34.72 2.41
4918 5823 1.130749 CGAGAGTCGTTCGGATCTGTT 59.869 52.381 0.42 0.00 34.72 3.16
4919 5824 0.727970 CGAGAGTCGTTCGGATCTGT 59.272 55.000 0.42 0.00 34.72 3.41
4920 5825 3.518017 CGAGAGTCGTTCGGATCTG 57.482 57.895 0.00 0.00 34.72 2.90
4933 5838 2.558795 TGGGAAAGAGTGAAGACGAGAG 59.441 50.000 0.00 0.00 0.00 3.20
4934 5839 2.594131 TGGGAAAGAGTGAAGACGAGA 58.406 47.619 0.00 0.00 0.00 4.04
4935 5840 3.386768 TTGGGAAAGAGTGAAGACGAG 57.613 47.619 0.00 0.00 0.00 4.18
4936 5841 4.351874 AATTGGGAAAGAGTGAAGACGA 57.648 40.909 0.00 0.00 0.00 4.20
4937 5842 5.438761 AAAATTGGGAAAGAGTGAAGACG 57.561 39.130 0.00 0.00 0.00 4.18
4938 5843 5.008712 ACGAAAATTGGGAAAGAGTGAAGAC 59.991 40.000 0.00 0.00 0.00 3.01
4939 5844 5.130350 ACGAAAATTGGGAAAGAGTGAAGA 58.870 37.500 0.00 0.00 0.00 2.87
4940 5845 5.239525 AGACGAAAATTGGGAAAGAGTGAAG 59.760 40.000 0.00 0.00 0.00 3.02
4941 5846 5.130350 AGACGAAAATTGGGAAAGAGTGAA 58.870 37.500 0.00 0.00 0.00 3.18
4942 5847 4.714632 AGACGAAAATTGGGAAAGAGTGA 58.285 39.130 0.00 0.00 0.00 3.41
4943 5848 5.438761 AAGACGAAAATTGGGAAAGAGTG 57.561 39.130 0.00 0.00 0.00 3.51
4944 5849 4.519350 GGAAGACGAAAATTGGGAAAGAGT 59.481 41.667 0.00 0.00 0.00 3.24
4945 5850 4.082733 GGGAAGACGAAAATTGGGAAAGAG 60.083 45.833 0.00 0.00 0.00 2.85
4946 5851 3.824443 GGGAAGACGAAAATTGGGAAAGA 59.176 43.478 0.00 0.00 0.00 2.52
4947 5852 3.826729 AGGGAAGACGAAAATTGGGAAAG 59.173 43.478 0.00 0.00 0.00 2.62
4948 5853 3.824443 GAGGGAAGACGAAAATTGGGAAA 59.176 43.478 0.00 0.00 0.00 3.13
4949 5854 3.073946 AGAGGGAAGACGAAAATTGGGAA 59.926 43.478 0.00 0.00 0.00 3.97
4950 5855 2.642807 AGAGGGAAGACGAAAATTGGGA 59.357 45.455 0.00 0.00 0.00 4.37
4951 5856 3.073274 AGAGGGAAGACGAAAATTGGG 57.927 47.619 0.00 0.00 0.00 4.12
4952 5857 4.082733 GGAAAGAGGGAAGACGAAAATTGG 60.083 45.833 0.00 0.00 0.00 3.16
4953 5858 4.762251 AGGAAAGAGGGAAGACGAAAATTG 59.238 41.667 0.00 0.00 0.00 2.32
4954 5859 4.762251 CAGGAAAGAGGGAAGACGAAAATT 59.238 41.667 0.00 0.00 0.00 1.82
4955 5860 4.202472 ACAGGAAAGAGGGAAGACGAAAAT 60.202 41.667 0.00 0.00 0.00 1.82
4956 5861 3.135895 ACAGGAAAGAGGGAAGACGAAAA 59.864 43.478 0.00 0.00 0.00 2.29
4957 5862 2.704065 ACAGGAAAGAGGGAAGACGAAA 59.296 45.455 0.00 0.00 0.00 3.46
4958 5863 2.326428 ACAGGAAAGAGGGAAGACGAA 58.674 47.619 0.00 0.00 0.00 3.85
4959 5864 2.011122 ACAGGAAAGAGGGAAGACGA 57.989 50.000 0.00 0.00 0.00 4.20
4960 5865 2.841442 AACAGGAAAGAGGGAAGACG 57.159 50.000 0.00 0.00 0.00 4.18
4961 5866 5.009110 CAGAAAAACAGGAAAGAGGGAAGAC 59.991 44.000 0.00 0.00 0.00 3.01
4962 5867 5.133221 CAGAAAAACAGGAAAGAGGGAAGA 58.867 41.667 0.00 0.00 0.00 2.87
4963 5868 4.279420 CCAGAAAAACAGGAAAGAGGGAAG 59.721 45.833 0.00 0.00 0.00 3.46
4964 5869 4.215109 CCAGAAAAACAGGAAAGAGGGAA 58.785 43.478 0.00 0.00 0.00 3.97
4965 5870 3.832527 CCAGAAAAACAGGAAAGAGGGA 58.167 45.455 0.00 0.00 0.00 4.20
4966 5871 2.297315 GCCAGAAAAACAGGAAAGAGGG 59.703 50.000 0.00 0.00 0.00 4.30
4967 5872 3.225940 AGCCAGAAAAACAGGAAAGAGG 58.774 45.455 0.00 0.00 0.00 3.69
4968 5873 4.926140 AAGCCAGAAAAACAGGAAAGAG 57.074 40.909 0.00 0.00 0.00 2.85
4969 5874 4.141959 CCAAAGCCAGAAAAACAGGAAAGA 60.142 41.667 0.00 0.00 0.00 2.52
4970 5875 4.122046 CCAAAGCCAGAAAAACAGGAAAG 58.878 43.478 0.00 0.00 0.00 2.62
4971 5876 3.118445 CCCAAAGCCAGAAAAACAGGAAA 60.118 43.478 0.00 0.00 0.00 3.13
4972 5877 2.433970 CCCAAAGCCAGAAAAACAGGAA 59.566 45.455 0.00 0.00 0.00 3.36
4973 5878 2.038659 CCCAAAGCCAGAAAAACAGGA 58.961 47.619 0.00 0.00 0.00 3.86
4974 5879 1.762370 ACCCAAAGCCAGAAAAACAGG 59.238 47.619 0.00 0.00 0.00 4.00
4975 5880 3.541996 AACCCAAAGCCAGAAAAACAG 57.458 42.857 0.00 0.00 0.00 3.16
4976 5881 3.990959 AAACCCAAAGCCAGAAAAACA 57.009 38.095 0.00 0.00 0.00 2.83
4977 5882 6.935741 ATAAAAACCCAAAGCCAGAAAAAC 57.064 33.333 0.00 0.00 0.00 2.43
4978 5883 7.342581 AGAATAAAAACCCAAAGCCAGAAAAA 58.657 30.769 0.00 0.00 0.00 1.94
4979 5884 6.894682 AGAATAAAAACCCAAAGCCAGAAAA 58.105 32.000 0.00 0.00 0.00 2.29
4980 5885 6.493189 AGAATAAAAACCCAAAGCCAGAAA 57.507 33.333 0.00 0.00 0.00 2.52
4981 5886 7.362574 CGATAGAATAAAAACCCAAAGCCAGAA 60.363 37.037 0.00 0.00 39.76 3.02
4982 5887 6.094881 CGATAGAATAAAAACCCAAAGCCAGA 59.905 38.462 0.00 0.00 39.76 3.86
4983 5888 6.265577 CGATAGAATAAAAACCCAAAGCCAG 58.734 40.000 0.00 0.00 39.76 4.85
4984 5889 5.126384 CCGATAGAATAAAAACCCAAAGCCA 59.874 40.000 0.00 0.00 39.76 4.75
4985 5890 5.126545 ACCGATAGAATAAAAACCCAAAGCC 59.873 40.000 0.00 0.00 39.76 4.35
4986 5891 6.203808 ACCGATAGAATAAAAACCCAAAGC 57.796 37.500 0.00 0.00 39.76 3.51
4987 5892 8.502105 ACTACCGATAGAATAAAAACCCAAAG 57.498 34.615 0.00 0.00 39.76 2.77
4988 5893 9.956640 TTACTACCGATAGAATAAAAACCCAAA 57.043 29.630 0.00 0.00 39.76 3.28
4995 5900 9.563748 CCCCAAATTACTACCGATAGAATAAAA 57.436 33.333 0.00 0.00 39.76 1.52
4996 5901 8.716779 ACCCCAAATTACTACCGATAGAATAAA 58.283 33.333 0.00 0.00 39.76 1.40
4997 5902 8.266363 ACCCCAAATTACTACCGATAGAATAA 57.734 34.615 0.00 0.00 39.76 1.40
4998 5903 7.510001 TGACCCCAAATTACTACCGATAGAATA 59.490 37.037 0.00 0.00 39.76 1.75
4999 5904 6.328148 TGACCCCAAATTACTACCGATAGAAT 59.672 38.462 0.00 0.00 39.76 2.40
5000 5905 5.662208 TGACCCCAAATTACTACCGATAGAA 59.338 40.000 0.00 0.00 39.76 2.10
5001 5906 5.210430 TGACCCCAAATTACTACCGATAGA 58.790 41.667 0.00 0.00 39.76 1.98
5002 5907 5.303589 TCTGACCCCAAATTACTACCGATAG 59.696 44.000 0.00 0.00 34.25 2.08
5003 5908 5.210430 TCTGACCCCAAATTACTACCGATA 58.790 41.667 0.00 0.00 0.00 2.92
5004 5909 4.035112 TCTGACCCCAAATTACTACCGAT 58.965 43.478 0.00 0.00 0.00 4.18
5005 5910 3.443052 TCTGACCCCAAATTACTACCGA 58.557 45.455 0.00 0.00 0.00 4.69
5006 5911 3.793559 CTCTGACCCCAAATTACTACCG 58.206 50.000 0.00 0.00 0.00 4.02
5007 5912 3.542648 GCTCTGACCCCAAATTACTACC 58.457 50.000 0.00 0.00 0.00 3.18
5008 5913 3.054655 TGGCTCTGACCCCAAATTACTAC 60.055 47.826 0.00 0.00 0.00 2.73
5009 5914 3.186283 TGGCTCTGACCCCAAATTACTA 58.814 45.455 0.00 0.00 0.00 1.82
5010 5915 1.992557 TGGCTCTGACCCCAAATTACT 59.007 47.619 0.00 0.00 0.00 2.24
5011 5916 2.507407 TGGCTCTGACCCCAAATTAC 57.493 50.000 0.00 0.00 0.00 1.89
5012 5917 3.534357 TTTGGCTCTGACCCCAAATTA 57.466 42.857 11.64 0.00 43.95 1.40
5013 5918 2.397044 TTTGGCTCTGACCCCAAATT 57.603 45.000 11.64 0.00 43.95 1.82
5014 5919 2.250924 CTTTTGGCTCTGACCCCAAAT 58.749 47.619 14.83 0.00 46.93 2.32
5015 5920 1.703411 CTTTTGGCTCTGACCCCAAA 58.297 50.000 11.64 11.64 46.31 3.28
5016 5921 0.178964 CCTTTTGGCTCTGACCCCAA 60.179 55.000 1.93 1.93 39.23 4.12
5017 5922 1.460255 CCTTTTGGCTCTGACCCCA 59.540 57.895 0.00 0.00 0.00 4.96
5018 5923 4.423231 CCTTTTGGCTCTGACCCC 57.577 61.111 0.00 0.00 0.00 4.95
5028 5933 0.598065 CTTCACGAAGGGCCTTTTGG 59.402 55.000 21.92 15.03 37.43 3.28
5045 5950 8.598041 ACATCTCTACAAATCACTACTTTCCTT 58.402 33.333 0.00 0.00 0.00 3.36
5049 5954 8.807118 TCTGACATCTCTACAAATCACTACTTT 58.193 33.333 0.00 0.00 0.00 2.66
5116 6022 6.293027 CGTTTTCGTTGGTAGGAAAAGTATGT 60.293 38.462 6.13 0.00 44.29 2.29
5221 6128 4.139859 TGGAAAGTGAAAGTTACGGTGA 57.860 40.909 0.00 0.00 0.00 4.02
5226 6133 5.392057 GCTAGCCATGGAAAGTGAAAGTTAC 60.392 44.000 18.40 0.00 0.00 2.50
5317 6224 5.359576 CCCAGTCCCGAAATGAATAAATGAA 59.640 40.000 0.00 0.00 0.00 2.57
5319 6226 4.499696 GCCCAGTCCCGAAATGAATAAATG 60.500 45.833 0.00 0.00 0.00 2.32
5320 6227 3.636764 GCCCAGTCCCGAAATGAATAAAT 59.363 43.478 0.00 0.00 0.00 1.40
5321 6228 3.020984 GCCCAGTCCCGAAATGAATAAA 58.979 45.455 0.00 0.00 0.00 1.40
5351 6259 0.677842 ACGAGAGTACGGCAAAGGTT 59.322 50.000 0.00 0.00 46.88 3.50
5376 6284 3.859961 CGATGAGCGTCTATTCACTTGTT 59.140 43.478 0.00 0.00 34.64 2.83
5391 6299 6.111768 AGATGTGTTATTTTCACGATGAGC 57.888 37.500 0.00 0.00 38.48 4.26
5493 6401 3.520290 CAAATCTGCATGTGCCATCTT 57.480 42.857 2.07 0.00 41.18 2.40
5522 6430 9.453572 CATACCTATATGTGGTATTTTCATGCT 57.546 33.333 15.39 0.00 45.48 3.79
5547 6455 6.553953 TTTGCCTTATGAGTCCACTATACA 57.446 37.500 0.00 0.00 0.00 2.29
5573 6481 3.067040 TGCGTCCAAAACTCTTTAAACCC 59.933 43.478 0.00 0.00 0.00 4.11
5609 6517 4.510038 AGCCTTCATTTTGCACTAAGTG 57.490 40.909 0.00 0.00 36.51 3.16
5654 6564 3.186613 ACGAGATTTTTCGCTCTTTGGTC 59.813 43.478 0.00 0.00 44.15 4.02
5661 6571 2.613691 TGGGTACGAGATTTTTCGCTC 58.386 47.619 0.00 0.00 44.15 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.