Multiple sequence alignment - TraesCS3B01G447400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G447400 chr3B 100.000 3125 0 0 1 3125 686491157 686494281 0.000000e+00 5771.0
1 TraesCS3B01G447400 chr3B 82.222 2070 192 100 351 2342 686523864 686525835 0.000000e+00 1622.0
2 TraesCS3B01G447400 chr3D 90.890 2810 174 43 250 3020 520823487 520826253 0.000000e+00 3696.0
3 TraesCS3B01G447400 chr3D 83.308 1965 182 85 441 2342 520862232 520864113 0.000000e+00 1677.0
4 TraesCS3B01G447400 chr3D 74.248 998 219 32 1097 2084 454219320 454220289 4.890000e-103 385.0
5 TraesCS3B01G447400 chr3A 94.091 1760 60 15 603 2333 656134429 656136173 0.000000e+00 2634.0
6 TraesCS3B01G447400 chr3A 91.411 1304 85 14 1038 2327 656254299 656255589 0.000000e+00 1762.0
7 TraesCS3B01G447400 chr3A 87.210 1423 118 40 992 2380 656423914 656425306 0.000000e+00 1561.0
8 TraesCS3B01G447400 chr3A 91.248 777 55 5 1564 2327 656339249 656340025 0.000000e+00 1046.0
9 TraesCS3B01G447400 chr3A 91.852 540 36 7 2133 2669 656264227 656264761 0.000000e+00 747.0
10 TraesCS3B01G447400 chr3A 91.822 538 38 5 2135 2669 656260696 656261230 0.000000e+00 745.0
11 TraesCS3B01G447400 chr3A 92.120 533 35 6 2140 2669 656348580 656349108 0.000000e+00 745.0
12 TraesCS3B01G447400 chr3A 91.264 538 41 5 2135 2669 656344887 656345421 0.000000e+00 728.0
13 TraesCS3B01G447400 chr3A 89.665 358 36 1 2663 3020 656176619 656176975 3.670000e-124 455.0
14 TraesCS3B01G447400 chr3A 90.385 312 24 5 2366 2672 656255587 656255897 3.750000e-109 405.0
15 TraesCS3B01G447400 chr3A 91.304 299 21 5 2329 2624 656176313 656176609 1.350000e-108 403.0
16 TraesCS3B01G447400 chr3A 90.064 312 25 5 2366 2672 656340023 656340333 1.750000e-107 399.0
17 TraesCS3B01G447400 chr3A 74.096 996 216 36 1101 2084 597234724 597233759 3.810000e-99 372.0
18 TraesCS3B01G447400 chr3A 89.804 255 22 4 176 427 656133746 656133999 1.080000e-84 324.0
19 TraesCS3B01G447400 chr3A 97.959 98 2 0 433 530 656134288 656134385 1.490000e-38 171.0
20 TraesCS3B01G447400 chr3A 92.381 105 6 2 3020 3124 656345719 656345617 6.980000e-32 148.0
21 TraesCS3B01G447400 chr3A 75.915 328 39 23 441 758 656253796 656254093 7.030000e-27 132.0
22 TraesCS3B01G447400 chr3A 75.915 328 39 23 441 758 656423446 656423743 7.030000e-27 132.0
23 TraesCS3B01G447400 chr3A 78.740 127 26 1 2650 2776 733189932 733189807 2.000000e-12 84.2
24 TraesCS3B01G447400 chrUn 91.373 255 19 3 2420 2672 476916014 476915761 2.310000e-91 346.0
25 TraesCS3B01G447400 chr1B 75.055 453 95 12 1409 1849 16216867 16217313 8.840000e-46 195.0
26 TraesCS3B01G447400 chr5D 77.432 257 55 3 1376 1630 241276445 241276700 1.940000e-32 150.0
27 TraesCS3B01G447400 chr6D 97.143 35 0 1 2381 2414 368736930 368736896 1.210000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G447400 chr3B 686491157 686494281 3124 False 5771.000000 5771 100.000000 1 3125 1 chr3B.!!$F1 3124
1 TraesCS3B01G447400 chr3B 686523864 686525835 1971 False 1622.000000 1622 82.222000 351 2342 1 chr3B.!!$F2 1991
2 TraesCS3B01G447400 chr3D 520823487 520826253 2766 False 3696.000000 3696 90.890000 250 3020 1 chr3D.!!$F2 2770
3 TraesCS3B01G447400 chr3D 520862232 520864113 1881 False 1677.000000 1677 83.308000 441 2342 1 chr3D.!!$F3 1901
4 TraesCS3B01G447400 chr3D 454219320 454220289 969 False 385.000000 385 74.248000 1097 2084 1 chr3D.!!$F1 987
5 TraesCS3B01G447400 chr3A 656133746 656136173 2427 False 1043.000000 2634 93.951333 176 2333 3 chr3A.!!$F1 2157
6 TraesCS3B01G447400 chr3A 656423446 656425306 1860 False 846.500000 1561 81.562500 441 2380 2 chr3A.!!$F7 1939
7 TraesCS3B01G447400 chr3A 656253796 656255897 2101 False 766.333333 1762 85.903667 441 2672 3 chr3A.!!$F3 2231
8 TraesCS3B01G447400 chr3A 656260696 656264761 4065 False 746.000000 747 91.837000 2133 2669 2 chr3A.!!$F4 536
9 TraesCS3B01G447400 chr3A 656344887 656349108 4221 False 736.500000 745 91.692000 2135 2669 2 chr3A.!!$F6 534
10 TraesCS3B01G447400 chr3A 656339249 656340333 1084 False 722.500000 1046 90.656000 1564 2672 2 chr3A.!!$F5 1108
11 TraesCS3B01G447400 chr3A 656176313 656176975 662 False 429.000000 455 90.484500 2329 3020 2 chr3A.!!$F2 691
12 TraesCS3B01G447400 chr3A 597233759 597234724 965 True 372.000000 372 74.096000 1101 2084 1 chr3A.!!$R1 983

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
667 1000 0.036875 AGCAAGCTGTAACCACCTCC 59.963 55.0 0.00 0.0 0.00 4.30 F
989 1350 0.530744 TCGTGGTGCACTGGTAGATC 59.469 55.0 17.98 0.0 31.34 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2109 2510 1.037579 TCGATCACTGCGACTCCCAT 61.038 55.0 0.0 0.0 32.09 4.00 R
2975 7369 1.503818 GCCGGTTTCTTGCTCAACGA 61.504 55.0 1.9 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.519291 AACTTAGCATGGCCCCCA 58.481 55.556 0.00 0.00 38.19 4.96
18 19 1.000359 AACTTAGCATGGCCCCCAC 60.000 57.895 0.00 0.00 35.80 4.61
19 20 2.123726 CTTAGCATGGCCCCCACC 60.124 66.667 0.00 0.00 35.80 4.61
20 21 3.738745 CTTAGCATGGCCCCCACCC 62.739 68.421 0.00 0.00 35.80 4.61
24 25 4.783501 CATGGCCCCCACCCAAGG 62.784 72.222 0.00 0.00 35.80 3.61
27 28 4.463788 GGCCCCCACCCAAGGATG 62.464 72.222 0.00 0.00 0.00 3.51
28 29 3.672503 GCCCCCACCCAAGGATGT 61.673 66.667 0.00 0.00 0.00 3.06
29 30 2.683475 CCCCCACCCAAGGATGTC 59.317 66.667 0.00 0.00 0.00 3.06
30 31 2.237965 CCCCCACCCAAGGATGTCA 61.238 63.158 0.00 0.00 0.00 3.58
31 32 1.304282 CCCCACCCAAGGATGTCAG 59.696 63.158 0.00 0.00 0.00 3.51
32 33 1.379044 CCCACCCAAGGATGTCAGC 60.379 63.158 0.00 0.00 0.00 4.26
33 34 1.379916 CCACCCAAGGATGTCAGCA 59.620 57.895 0.00 0.00 0.00 4.41
34 35 0.962356 CCACCCAAGGATGTCAGCAC 60.962 60.000 0.00 0.00 0.00 4.40
35 36 0.250858 CACCCAAGGATGTCAGCACA 60.251 55.000 0.00 0.00 36.78 4.57
36 37 0.478072 ACCCAAGGATGTCAGCACAA 59.522 50.000 0.00 0.00 35.64 3.33
37 38 1.133513 ACCCAAGGATGTCAGCACAAA 60.134 47.619 0.00 0.00 35.64 2.83
38 39 2.173519 CCCAAGGATGTCAGCACAAAT 58.826 47.619 0.00 0.00 35.64 2.32
39 40 2.165030 CCCAAGGATGTCAGCACAAATC 59.835 50.000 0.00 0.00 35.64 2.17
40 41 2.159476 CCAAGGATGTCAGCACAAATCG 60.159 50.000 0.00 0.00 35.64 3.34
41 42 2.743664 CAAGGATGTCAGCACAAATCGA 59.256 45.455 0.00 0.00 35.64 3.59
42 43 2.625737 AGGATGTCAGCACAAATCGAG 58.374 47.619 0.00 0.00 35.64 4.04
43 44 2.234661 AGGATGTCAGCACAAATCGAGA 59.765 45.455 0.00 0.00 35.64 4.04
44 45 3.002791 GGATGTCAGCACAAATCGAGAA 58.997 45.455 0.00 0.00 35.64 2.87
45 46 3.436704 GGATGTCAGCACAAATCGAGAAA 59.563 43.478 0.00 0.00 35.64 2.52
46 47 4.083324 GGATGTCAGCACAAATCGAGAAAA 60.083 41.667 0.00 0.00 35.64 2.29
47 48 4.891627 TGTCAGCACAAATCGAGAAAAA 57.108 36.364 0.00 0.00 0.00 1.94
71 72 7.772332 AAATCATAACTTCTACTGTTAGGCG 57.228 36.000 0.00 0.00 33.42 5.52
72 73 4.679662 TCATAACTTCTACTGTTAGGCGC 58.320 43.478 0.00 0.00 33.42 6.53
73 74 4.401519 TCATAACTTCTACTGTTAGGCGCT 59.598 41.667 7.64 0.00 33.42 5.92
74 75 2.656560 ACTTCTACTGTTAGGCGCTG 57.343 50.000 7.64 0.00 0.00 5.18
75 76 2.168496 ACTTCTACTGTTAGGCGCTGA 58.832 47.619 7.64 0.00 0.00 4.26
76 77 2.561419 ACTTCTACTGTTAGGCGCTGAA 59.439 45.455 7.64 0.00 0.00 3.02
77 78 3.195825 ACTTCTACTGTTAGGCGCTGAAT 59.804 43.478 7.64 0.00 0.00 2.57
78 79 3.165058 TCTACTGTTAGGCGCTGAATG 57.835 47.619 7.64 2.24 0.00 2.67
79 80 2.496070 TCTACTGTTAGGCGCTGAATGT 59.504 45.455 7.64 7.80 0.00 2.71
80 81 2.185004 ACTGTTAGGCGCTGAATGTT 57.815 45.000 7.64 0.00 0.00 2.71
81 82 2.504367 ACTGTTAGGCGCTGAATGTTT 58.496 42.857 7.64 0.00 0.00 2.83
82 83 2.884639 ACTGTTAGGCGCTGAATGTTTT 59.115 40.909 7.64 0.00 0.00 2.43
83 84 3.236816 CTGTTAGGCGCTGAATGTTTTG 58.763 45.455 7.64 0.00 0.00 2.44
84 85 2.881513 TGTTAGGCGCTGAATGTTTTGA 59.118 40.909 7.64 0.00 0.00 2.69
85 86 3.505680 TGTTAGGCGCTGAATGTTTTGAT 59.494 39.130 7.64 0.00 0.00 2.57
86 87 4.022416 TGTTAGGCGCTGAATGTTTTGATT 60.022 37.500 7.64 0.00 0.00 2.57
87 88 3.665745 AGGCGCTGAATGTTTTGATTT 57.334 38.095 7.64 0.00 0.00 2.17
88 89 3.993920 AGGCGCTGAATGTTTTGATTTT 58.006 36.364 7.64 0.00 0.00 1.82
89 90 3.742369 AGGCGCTGAATGTTTTGATTTTG 59.258 39.130 7.64 0.00 0.00 2.44
90 91 3.120580 GGCGCTGAATGTTTTGATTTTGG 60.121 43.478 7.64 0.00 0.00 3.28
91 92 3.494251 GCGCTGAATGTTTTGATTTTGGT 59.506 39.130 0.00 0.00 0.00 3.67
92 93 4.024977 GCGCTGAATGTTTTGATTTTGGTT 60.025 37.500 0.00 0.00 0.00 3.67
93 94 5.503846 GCGCTGAATGTTTTGATTTTGGTTT 60.504 36.000 0.00 0.00 0.00 3.27
94 95 5.902981 CGCTGAATGTTTTGATTTTGGTTTG 59.097 36.000 0.00 0.00 0.00 2.93
95 96 6.238049 CGCTGAATGTTTTGATTTTGGTTTGA 60.238 34.615 0.00 0.00 0.00 2.69
96 97 7.518689 CGCTGAATGTTTTGATTTTGGTTTGAT 60.519 33.333 0.00 0.00 0.00 2.57
97 98 8.130469 GCTGAATGTTTTGATTTTGGTTTGATT 58.870 29.630 0.00 0.00 0.00 2.57
132 133 8.428186 AATAATTAATTGACAGCAATGCCTTG 57.572 30.769 11.05 0.00 43.71 3.61
133 134 4.870123 TTAATTGACAGCAATGCCTTGT 57.130 36.364 0.00 0.00 43.71 3.16
134 135 3.756933 AATTGACAGCAATGCCTTGTT 57.243 38.095 0.00 0.00 43.71 2.83
135 136 2.798976 TTGACAGCAATGCCTTGTTC 57.201 45.000 0.00 0.00 34.69 3.18
136 137 0.592637 TGACAGCAATGCCTTGTTCG 59.407 50.000 0.00 0.00 34.69 3.95
137 138 0.593128 GACAGCAATGCCTTGTTCGT 59.407 50.000 0.00 0.00 34.69 3.85
138 139 1.804151 GACAGCAATGCCTTGTTCGTA 59.196 47.619 0.00 0.00 34.69 3.43
139 140 2.225491 GACAGCAATGCCTTGTTCGTAA 59.775 45.455 0.00 0.00 34.69 3.18
140 141 2.819608 ACAGCAATGCCTTGTTCGTAAT 59.180 40.909 0.00 0.00 34.69 1.89
141 142 3.255642 ACAGCAATGCCTTGTTCGTAATT 59.744 39.130 0.00 0.00 34.69 1.40
142 143 4.457603 ACAGCAATGCCTTGTTCGTAATTA 59.542 37.500 0.00 0.00 34.69 1.40
143 144 5.030295 CAGCAATGCCTTGTTCGTAATTAG 58.970 41.667 0.00 0.00 34.69 1.73
144 145 4.700213 AGCAATGCCTTGTTCGTAATTAGT 59.300 37.500 0.00 0.00 34.69 2.24
145 146 4.793216 GCAATGCCTTGTTCGTAATTAGTG 59.207 41.667 3.59 0.00 34.69 2.74
146 147 5.331902 CAATGCCTTGTTCGTAATTAGTGG 58.668 41.667 0.00 0.00 0.00 4.00
147 148 4.274602 TGCCTTGTTCGTAATTAGTGGA 57.725 40.909 0.00 0.00 0.00 4.02
148 149 4.643463 TGCCTTGTTCGTAATTAGTGGAA 58.357 39.130 0.00 0.00 0.00 3.53
149 150 4.453136 TGCCTTGTTCGTAATTAGTGGAAC 59.547 41.667 13.27 13.27 39.29 3.62
150 151 4.453136 GCCTTGTTCGTAATTAGTGGAACA 59.547 41.667 16.67 16.67 44.87 3.18
155 156 7.789273 TGTTCGTAATTAGTGGAACAAAGAA 57.211 32.000 17.63 2.59 43.94 2.52
156 157 8.211116 TGTTCGTAATTAGTGGAACAAAGAAA 57.789 30.769 17.63 2.10 43.94 2.52
157 158 8.339714 TGTTCGTAATTAGTGGAACAAAGAAAG 58.660 33.333 17.63 0.00 43.94 2.62
158 159 6.894828 TCGTAATTAGTGGAACAAAGAAAGC 58.105 36.000 0.00 0.00 44.16 3.51
159 160 6.708949 TCGTAATTAGTGGAACAAAGAAAGCT 59.291 34.615 0.00 0.00 44.16 3.74
160 161 7.874016 TCGTAATTAGTGGAACAAAGAAAGCTA 59.126 33.333 0.00 0.00 44.16 3.32
161 162 8.665685 CGTAATTAGTGGAACAAAGAAAGCTAT 58.334 33.333 0.00 0.00 44.16 2.97
206 207 5.533903 AGAAGGAAAACAGTGTACTAGACGA 59.466 40.000 0.00 0.00 0.00 4.20
211 212 4.785511 AACAGTGTACTAGACGAAGCAT 57.214 40.909 0.00 0.00 0.00 3.79
214 215 2.688958 AGTGTACTAGACGAAGCATCCC 59.311 50.000 0.00 0.00 0.00 3.85
219 220 1.672854 TAGACGAAGCATCCCACCCG 61.673 60.000 0.00 0.00 0.00 5.28
220 221 3.310860 GACGAAGCATCCCACCCGT 62.311 63.158 0.00 0.00 0.00 5.28
228 229 1.035932 CATCCCACCCGTAGTCGTCT 61.036 60.000 0.00 0.00 35.01 4.18
241 242 1.169577 GTCGTCTGCCTCTTGAGAGA 58.830 55.000 9.55 0.00 44.74 3.10
259 260 1.006102 AGGGAACAGAGTGAACGCG 60.006 57.895 3.53 3.53 0.00 6.01
362 363 1.019673 CTCCTCAACCGCCATCAATG 58.980 55.000 0.00 0.00 0.00 2.82
415 427 2.337532 CCCAAGCACAACAGCAGC 59.662 61.111 0.00 0.00 36.85 5.25
418 430 1.660575 CAAGCACAACAGCAGCAGC 60.661 57.895 0.00 0.00 42.56 5.25
551 881 0.685458 AATGAATCAGGCCTGCACCC 60.685 55.000 28.91 16.24 0.00 4.61
561 891 2.597340 CTGCACCCCGGGAATGAT 59.403 61.111 26.32 0.00 0.00 2.45
562 892 1.076777 CTGCACCCCGGGAATGATT 60.077 57.895 26.32 0.00 0.00 2.57
588 918 2.961721 CCGTCGGCATGATCGGTG 60.962 66.667 0.00 0.00 36.87 4.94
617 947 1.521681 CCCTGAATCTTCGTCGCCC 60.522 63.158 0.00 0.00 0.00 6.13
620 950 2.238847 CTGAATCTTCGTCGCCCCCA 62.239 60.000 0.00 0.00 0.00 4.96
657 990 1.458639 GCAACTTGGGAGCAAGCTGT 61.459 55.000 0.00 0.00 35.70 4.40
667 1000 0.036875 AGCAAGCTGTAACCACCTCC 59.963 55.000 0.00 0.00 0.00 4.30
683 1016 0.964700 CTCCAGCAGAGTCTGACACA 59.035 55.000 24.55 3.41 37.87 3.72
866 1213 3.928727 TCTCCACCTATAAATACGCCG 57.071 47.619 0.00 0.00 0.00 6.46
878 1225 3.949885 TACGCCGCCTCCCTTCTCA 62.950 63.158 0.00 0.00 0.00 3.27
879 1226 4.082523 CGCCGCCTCCCTTCTCAA 62.083 66.667 0.00 0.00 0.00 3.02
883 1230 1.604378 CGCCTCCCTTCTCAACCAT 59.396 57.895 0.00 0.00 0.00 3.55
919 1274 3.648694 GCTAGCTAGCCCCCAAGT 58.351 61.111 31.67 0.00 43.39 3.16
929 1285 1.147153 CCCCCAAGTAGCTGCTAGC 59.853 63.158 10.13 8.10 42.84 3.42
961 1322 1.790755 CACTGCGTACAAAGGTAGCA 58.209 50.000 0.00 0.00 34.63 3.49
965 1326 2.139917 TGCGTACAAAGGTAGCAACTG 58.860 47.619 0.00 0.00 33.63 3.16
987 1348 1.964448 CTCGTGGTGCACTGGTAGA 59.036 57.895 17.98 8.58 31.34 2.59
989 1350 0.530744 TCGTGGTGCACTGGTAGATC 59.469 55.000 17.98 0.00 31.34 2.75
1125 1499 3.894947 GAGTCGGAGGAGGCGCTC 61.895 72.222 7.64 2.45 0.00 5.03
1636 2010 1.069378 GGACAACGCCTTCGAGTACG 61.069 60.000 2.08 2.08 39.41 3.67
2065 2460 1.146263 GCATCCTACCCCGTCAAGG 59.854 63.158 0.00 0.00 40.63 3.61
2087 2482 1.382420 ACAGCAAACCCAAGCCCAA 60.382 52.632 0.00 0.00 0.00 4.12
2138 2546 1.679305 AGTGATCGACCCGTCTGCT 60.679 57.895 0.00 0.00 0.00 4.24
2157 2565 7.394872 GTCTGCTTGTCTGAATTATTTCTACG 58.605 38.462 0.00 0.00 32.78 3.51
2214 2628 3.244491 ACAGCTGAATCAAGTGCTTCTCT 60.244 43.478 23.35 0.00 33.03 3.10
2235 2656 2.224426 TGTCCACACGCAAGAATTAGGT 60.224 45.455 0.00 0.00 43.62 3.08
2345 2773 4.545610 TGTTTGTAAGCTTGCTAATGTGC 58.454 39.130 15.83 3.58 0.00 4.57
2372 2800 5.069516 TGTTCTACTCCGAGTTGGTTAGTTT 59.930 40.000 6.31 0.00 39.52 2.66
2437 6828 9.771534 GAAGCAGATGGAGTACTTTATTTAGAT 57.228 33.333 0.00 0.00 0.00 1.98
2454 6845 9.731819 TTATTTAGATTAGACGATATGATCCGC 57.268 33.333 0.00 0.00 0.00 5.54
2455 6846 6.753107 TTAGATTAGACGATATGATCCGCA 57.247 37.500 0.00 0.00 0.00 5.69
2461 6854 0.792640 CGATATGATCCGCAGTTGCC 59.207 55.000 0.00 0.00 37.91 4.52
2465 6858 0.106708 ATGATCCGCAGTTGCCGTAT 59.893 50.000 0.00 0.00 37.91 3.06
2480 6873 8.869897 CAGTTGCCGTATAAATGGTATATAGTG 58.130 37.037 0.00 0.00 33.88 2.74
2701 7095 7.793927 AGTGGATCAAGCTAGTAAATTTAGC 57.206 36.000 0.00 0.45 42.99 3.09
2714 7108 7.153217 AGTAAATTTAGCGGCTACAACAATT 57.847 32.000 9.68 10.01 0.00 2.32
2731 7125 5.471556 ACAATTTTGATGATGTGGAAGCA 57.528 34.783 0.00 0.00 0.00 3.91
2742 7136 1.948834 TGTGGAAGCACACATGTCAAG 59.051 47.619 0.00 0.00 45.70 3.02
2752 7146 7.545362 AGCACACATGTCAAGATAATTAGAC 57.455 36.000 0.00 0.00 0.00 2.59
2755 7149 7.413000 GCACACATGTCAAGATAATTAGACGTT 60.413 37.037 0.00 0.00 33.83 3.99
2757 7151 7.602644 ACACATGTCAAGATAATTAGACGTTGT 59.397 33.333 0.00 0.00 33.24 3.32
2767 7161 8.142551 AGATAATTAGACGTTGTGGAGATAACC 58.857 37.037 0.00 0.00 0.00 2.85
2768 7162 5.934402 ATTAGACGTTGTGGAGATAACCT 57.066 39.130 0.00 0.00 0.00 3.50
2769 7163 5.733620 TTAGACGTTGTGGAGATAACCTT 57.266 39.130 0.00 0.00 0.00 3.50
2853 7247 8.204160 TCTAAAGAACTCATCTGACAAAACTCA 58.796 33.333 0.00 0.00 38.79 3.41
2878 7272 9.419297 CAGTTTGTCAATTTCATCAATCTCAAT 57.581 29.630 0.00 0.00 0.00 2.57
2891 7285 9.288576 TCATCAATCTCAATCTTTGTTTACTGT 57.711 29.630 0.00 0.00 0.00 3.55
2909 7303 7.751047 TTACTGTCGCATAAGTATTGACTTC 57.249 36.000 0.00 0.00 42.50 3.01
2914 7308 8.407457 TGTCGCATAAGTATTGACTTCTTAAG 57.593 34.615 0.00 0.00 42.50 1.85
2915 7309 7.010183 TGTCGCATAAGTATTGACTTCTTAAGC 59.990 37.037 0.00 0.00 42.50 3.09
2929 7323 8.939929 TGACTTCTTAAGCAGATACAAATTCTG 58.060 33.333 9.23 0.00 42.83 3.02
2930 7324 8.273780 ACTTCTTAAGCAGATACAAATTCTGG 57.726 34.615 9.23 0.00 40.77 3.86
2937 7331 5.821470 AGCAGATACAAATTCTGGTCATGAG 59.179 40.000 0.00 0.00 46.06 2.90
2944 7338 0.250234 TTCTGGTCATGAGGGCTTCG 59.750 55.000 0.00 0.00 0.00 3.79
2969 7363 3.465742 TCTCAAGTGAGATGCATAGGC 57.534 47.619 6.92 0.00 45.48 3.93
2975 7369 2.169352 AGTGAGATGCATAGGCGAAGTT 59.831 45.455 0.00 0.00 45.35 2.66
3000 7394 1.215382 GCAAGAAACCGGCAATCCC 59.785 57.895 0.00 0.00 0.00 3.85
3004 7398 2.052782 AGAAACCGGCAATCCCATAC 57.947 50.000 0.00 0.00 0.00 2.39
3020 7414 3.498397 CCCATACCATCAAAGTGATACGC 59.502 47.826 0.00 0.00 34.28 4.42
3021 7415 4.126437 CCATACCATCAAAGTGATACGCA 58.874 43.478 0.00 0.00 34.28 5.24
3022 7416 4.756642 CCATACCATCAAAGTGATACGCAT 59.243 41.667 0.00 0.00 34.28 4.73
3023 7417 5.106948 CCATACCATCAAAGTGATACGCATC 60.107 44.000 0.00 0.00 34.28 3.91
3024 7418 4.142609 ACCATCAAAGTGATACGCATCT 57.857 40.909 0.00 0.00 34.28 2.90
3025 7419 5.276461 ACCATCAAAGTGATACGCATCTA 57.724 39.130 0.00 0.00 34.28 1.98
3026 7420 5.670485 ACCATCAAAGTGATACGCATCTAA 58.330 37.500 0.00 0.00 34.28 2.10
3027 7421 5.523916 ACCATCAAAGTGATACGCATCTAAC 59.476 40.000 0.00 0.00 34.28 2.34
3028 7422 5.755375 CCATCAAAGTGATACGCATCTAACT 59.245 40.000 0.00 0.00 34.28 2.24
3029 7423 6.923508 CCATCAAAGTGATACGCATCTAACTA 59.076 38.462 0.00 0.00 34.28 2.24
3030 7424 7.115520 CCATCAAAGTGATACGCATCTAACTAG 59.884 40.741 0.00 0.00 34.28 2.57
3031 7425 6.504398 TCAAAGTGATACGCATCTAACTAGG 58.496 40.000 0.00 0.00 31.93 3.02
3032 7426 4.506886 AGTGATACGCATCTAACTAGGC 57.493 45.455 0.00 0.00 31.93 3.93
3033 7427 3.889538 AGTGATACGCATCTAACTAGGCA 59.110 43.478 0.00 0.00 31.93 4.75
3034 7428 4.341235 AGTGATACGCATCTAACTAGGCAA 59.659 41.667 0.00 0.00 31.93 4.52
3035 7429 5.011125 AGTGATACGCATCTAACTAGGCAAT 59.989 40.000 0.00 0.00 31.93 3.56
3036 7430 5.696724 GTGATACGCATCTAACTAGGCAATT 59.303 40.000 0.00 0.00 31.93 2.32
3037 7431 5.696270 TGATACGCATCTAACTAGGCAATTG 59.304 40.000 0.00 0.00 31.93 2.32
3038 7432 2.614057 ACGCATCTAACTAGGCAATTGC 59.386 45.455 22.47 22.47 41.14 3.56
3039 7433 2.613595 CGCATCTAACTAGGCAATTGCA 59.386 45.455 30.32 11.40 44.36 4.08
3040 7434 3.546815 CGCATCTAACTAGGCAATTGCAC 60.547 47.826 30.32 19.57 44.36 4.57
3041 7435 3.378112 GCATCTAACTAGGCAATTGCACA 59.622 43.478 30.32 16.59 44.36 4.57
3042 7436 4.142403 GCATCTAACTAGGCAATTGCACAA 60.142 41.667 30.32 14.48 44.36 3.33
3043 7437 5.575957 CATCTAACTAGGCAATTGCACAAG 58.424 41.667 30.32 23.76 44.36 3.16
3044 7438 4.009675 TCTAACTAGGCAATTGCACAAGG 58.990 43.478 30.32 17.01 44.36 3.61
3045 7439 2.292828 ACTAGGCAATTGCACAAGGT 57.707 45.000 30.32 17.59 44.36 3.50
3046 7440 2.597455 ACTAGGCAATTGCACAAGGTT 58.403 42.857 30.32 9.81 44.36 3.50
3047 7441 2.297033 ACTAGGCAATTGCACAAGGTTG 59.703 45.455 30.32 13.49 44.36 3.77
3048 7442 0.393820 AGGCAATTGCACAAGGTTGG 59.606 50.000 30.32 0.00 44.36 3.77
3049 7443 0.106521 GGCAATTGCACAAGGTTGGT 59.893 50.000 30.32 0.00 44.36 3.67
3050 7444 1.342819 GGCAATTGCACAAGGTTGGTA 59.657 47.619 30.32 0.00 44.36 3.25
3051 7445 2.224161 GGCAATTGCACAAGGTTGGTAA 60.224 45.455 30.32 0.00 44.36 2.85
3052 7446 3.462021 GCAATTGCACAAGGTTGGTAAA 58.538 40.909 25.36 0.00 41.59 2.01
3053 7447 4.064388 GCAATTGCACAAGGTTGGTAAAT 58.936 39.130 25.36 0.00 41.59 1.40
3054 7448 4.083908 GCAATTGCACAAGGTTGGTAAATG 60.084 41.667 25.36 0.00 41.59 2.32
3055 7449 5.295950 CAATTGCACAAGGTTGGTAAATGA 58.704 37.500 0.00 0.00 0.00 2.57
3056 7450 4.582701 TTGCACAAGGTTGGTAAATGAG 57.417 40.909 0.00 0.00 0.00 2.90
3057 7451 3.826524 TGCACAAGGTTGGTAAATGAGA 58.173 40.909 0.00 0.00 0.00 3.27
3058 7452 4.211125 TGCACAAGGTTGGTAAATGAGAA 58.789 39.130 0.00 0.00 0.00 2.87
3059 7453 4.832266 TGCACAAGGTTGGTAAATGAGAAT 59.168 37.500 0.00 0.00 0.00 2.40
3060 7454 5.304101 TGCACAAGGTTGGTAAATGAGAATT 59.696 36.000 0.00 0.00 0.00 2.17
3061 7455 5.863935 GCACAAGGTTGGTAAATGAGAATTC 59.136 40.000 0.00 0.00 0.00 2.17
3062 7456 6.294731 GCACAAGGTTGGTAAATGAGAATTCT 60.295 38.462 7.95 7.95 0.00 2.40
3063 7457 7.094377 GCACAAGGTTGGTAAATGAGAATTCTA 60.094 37.037 8.25 0.00 0.00 2.10
3064 7458 8.237267 CACAAGGTTGGTAAATGAGAATTCTAC 58.763 37.037 8.25 2.19 0.00 2.59
3065 7459 7.942341 ACAAGGTTGGTAAATGAGAATTCTACA 59.058 33.333 8.25 8.82 0.00 2.74
3066 7460 8.792633 CAAGGTTGGTAAATGAGAATTCTACAA 58.207 33.333 8.25 0.00 0.00 2.41
3067 7461 8.934023 AGGTTGGTAAATGAGAATTCTACAAA 57.066 30.769 8.25 0.00 0.00 2.83
3068 7462 9.533831 AGGTTGGTAAATGAGAATTCTACAAAT 57.466 29.630 8.25 4.92 0.00 2.32
3069 7463 9.573133 GGTTGGTAAATGAGAATTCTACAAATG 57.427 33.333 8.25 0.00 0.00 2.32
3070 7464 9.573133 GTTGGTAAATGAGAATTCTACAAATGG 57.427 33.333 8.25 0.00 0.00 3.16
3071 7465 8.292444 TGGTAAATGAGAATTCTACAAATGGG 57.708 34.615 8.25 0.00 0.00 4.00
3072 7466 7.147915 TGGTAAATGAGAATTCTACAAATGGGC 60.148 37.037 8.25 0.00 0.00 5.36
3073 7467 5.859205 AATGAGAATTCTACAAATGGGCC 57.141 39.130 8.25 0.00 0.00 5.80
3074 7468 4.591321 TGAGAATTCTACAAATGGGCCT 57.409 40.909 8.25 0.00 0.00 5.19
3075 7469 5.708736 TGAGAATTCTACAAATGGGCCTA 57.291 39.130 8.25 0.00 0.00 3.93
3076 7470 6.073447 TGAGAATTCTACAAATGGGCCTAA 57.927 37.500 8.25 0.00 0.00 2.69
3077 7471 6.489603 TGAGAATTCTACAAATGGGCCTAAA 58.510 36.000 8.25 0.00 0.00 1.85
3078 7472 6.951198 TGAGAATTCTACAAATGGGCCTAAAA 59.049 34.615 8.25 0.00 0.00 1.52
3079 7473 7.619302 TGAGAATTCTACAAATGGGCCTAAAAT 59.381 33.333 8.25 0.00 0.00 1.82
3080 7474 7.785033 AGAATTCTACAAATGGGCCTAAAATG 58.215 34.615 6.06 0.00 0.00 2.32
3081 7475 5.337578 TTCTACAAATGGGCCTAAAATGC 57.662 39.130 4.53 0.00 0.00 3.56
3082 7476 4.609301 TCTACAAATGGGCCTAAAATGCT 58.391 39.130 4.53 0.00 0.00 3.79
3083 7477 3.615224 ACAAATGGGCCTAAAATGCTG 57.385 42.857 4.53 0.00 0.00 4.41
3084 7478 2.905736 ACAAATGGGCCTAAAATGCTGT 59.094 40.909 4.53 0.00 0.00 4.40
3085 7479 3.264104 CAAATGGGCCTAAAATGCTGTG 58.736 45.455 4.53 0.00 0.00 3.66
3086 7480 2.530460 ATGGGCCTAAAATGCTGTGA 57.470 45.000 4.53 0.00 0.00 3.58
3087 7481 1.838112 TGGGCCTAAAATGCTGTGAG 58.162 50.000 4.53 0.00 0.00 3.51
3088 7482 1.354031 TGGGCCTAAAATGCTGTGAGA 59.646 47.619 4.53 0.00 0.00 3.27
3089 7483 2.224992 TGGGCCTAAAATGCTGTGAGAA 60.225 45.455 4.53 0.00 0.00 2.87
3090 7484 2.164422 GGGCCTAAAATGCTGTGAGAAC 59.836 50.000 0.84 0.00 0.00 3.01
3091 7485 3.084786 GGCCTAAAATGCTGTGAGAACT 58.915 45.455 0.00 0.00 0.00 3.01
3092 7486 3.127721 GGCCTAAAATGCTGTGAGAACTC 59.872 47.826 0.00 0.00 0.00 3.01
3093 7487 3.127721 GCCTAAAATGCTGTGAGAACTCC 59.872 47.826 0.00 0.00 0.00 3.85
3094 7488 4.326826 CCTAAAATGCTGTGAGAACTCCA 58.673 43.478 0.00 0.00 0.00 3.86
3095 7489 4.761739 CCTAAAATGCTGTGAGAACTCCAA 59.238 41.667 0.00 0.00 0.00 3.53
3096 7490 4.843220 AAAATGCTGTGAGAACTCCAAG 57.157 40.909 0.00 0.00 0.00 3.61
3097 7491 3.777106 AATGCTGTGAGAACTCCAAGA 57.223 42.857 0.00 0.00 0.00 3.02
3098 7492 3.777106 ATGCTGTGAGAACTCCAAGAA 57.223 42.857 0.00 0.00 0.00 2.52
3099 7493 3.558931 TGCTGTGAGAACTCCAAGAAA 57.441 42.857 0.00 0.00 0.00 2.52
3100 7494 3.884895 TGCTGTGAGAACTCCAAGAAAA 58.115 40.909 0.00 0.00 0.00 2.29
3101 7495 4.269183 TGCTGTGAGAACTCCAAGAAAAA 58.731 39.130 0.00 0.00 0.00 1.94
3102 7496 4.336433 TGCTGTGAGAACTCCAAGAAAAAG 59.664 41.667 0.00 0.00 0.00 2.27
3103 7497 4.576463 GCTGTGAGAACTCCAAGAAAAAGA 59.424 41.667 0.00 0.00 0.00 2.52
3104 7498 5.277731 GCTGTGAGAACTCCAAGAAAAAGAG 60.278 44.000 0.00 0.00 0.00 2.85
3105 7499 5.745227 TGTGAGAACTCCAAGAAAAAGAGT 58.255 37.500 0.00 0.00 42.58 3.24
3106 7500 6.884832 TGTGAGAACTCCAAGAAAAAGAGTA 58.115 36.000 0.00 0.00 39.92 2.59
3107 7501 6.986817 TGTGAGAACTCCAAGAAAAAGAGTAG 59.013 38.462 0.00 0.00 39.92 2.57
3108 7502 7.147724 TGTGAGAACTCCAAGAAAAAGAGTAGA 60.148 37.037 0.00 0.00 39.92 2.59
3109 7503 7.711339 GTGAGAACTCCAAGAAAAAGAGTAGAA 59.289 37.037 0.00 0.00 39.92 2.10
3110 7504 8.265055 TGAGAACTCCAAGAAAAAGAGTAGAAA 58.735 33.333 0.00 0.00 39.92 2.52
3111 7505 8.439993 AGAACTCCAAGAAAAAGAGTAGAAAC 57.560 34.615 0.00 0.00 39.92 2.78
3112 7506 8.047310 AGAACTCCAAGAAAAAGAGTAGAAACA 58.953 33.333 0.00 0.00 39.92 2.83
3113 7507 8.575649 AACTCCAAGAAAAAGAGTAGAAACAA 57.424 30.769 0.00 0.00 39.92 2.83
3114 7508 7.986562 ACTCCAAGAAAAAGAGTAGAAACAAC 58.013 34.615 0.00 0.00 39.06 3.32
3115 7509 7.067129 ACTCCAAGAAAAAGAGTAGAAACAACC 59.933 37.037 0.00 0.00 39.06 3.77
3116 7510 6.320418 TCCAAGAAAAAGAGTAGAAACAACCC 59.680 38.462 0.00 0.00 0.00 4.11
3117 7511 6.096282 CCAAGAAAAAGAGTAGAAACAACCCA 59.904 38.462 0.00 0.00 0.00 4.51
3118 7512 7.363443 CCAAGAAAAAGAGTAGAAACAACCCAA 60.363 37.037 0.00 0.00 0.00 4.12
3119 7513 7.898014 AGAAAAAGAGTAGAAACAACCCAAT 57.102 32.000 0.00 0.00 0.00 3.16
3120 7514 7.941919 AGAAAAAGAGTAGAAACAACCCAATC 58.058 34.615 0.00 0.00 0.00 2.67
3121 7515 7.780271 AGAAAAAGAGTAGAAACAACCCAATCT 59.220 33.333 0.00 0.00 0.00 2.40
3122 7516 7.511959 AAAAGAGTAGAAACAACCCAATCTC 57.488 36.000 0.00 0.00 0.00 2.75
3123 7517 6.441088 AAGAGTAGAAACAACCCAATCTCT 57.559 37.500 0.00 0.00 0.00 3.10
3124 7518 6.043854 AGAGTAGAAACAACCCAATCTCTC 57.956 41.667 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.749870 GGGTGGGGGCCATGCTAA 61.750 66.667 4.39 0.00 35.28 3.09
7 8 4.783501 CCTTGGGTGGGGGCCATG 62.784 72.222 4.39 0.00 35.28 3.66
10 11 4.463788 CATCCTTGGGTGGGGGCC 62.464 72.222 0.00 0.00 0.00 5.80
12 13 2.215451 CTGACATCCTTGGGTGGGGG 62.215 65.000 4.82 0.00 0.00 5.40
13 14 1.304282 CTGACATCCTTGGGTGGGG 59.696 63.158 4.82 0.00 0.00 4.96
14 15 1.379044 GCTGACATCCTTGGGTGGG 60.379 63.158 4.82 0.00 0.00 4.61
15 16 0.962356 GTGCTGACATCCTTGGGTGG 60.962 60.000 4.82 0.00 0.00 4.61
16 17 0.250858 TGTGCTGACATCCTTGGGTG 60.251 55.000 0.00 0.00 0.00 4.61
17 18 0.478072 TTGTGCTGACATCCTTGGGT 59.522 50.000 0.00 0.00 30.13 4.51
18 19 1.619654 TTTGTGCTGACATCCTTGGG 58.380 50.000 0.00 0.00 30.13 4.12
19 20 2.159476 CGATTTGTGCTGACATCCTTGG 60.159 50.000 0.00 0.00 30.13 3.61
20 21 2.743664 TCGATTTGTGCTGACATCCTTG 59.256 45.455 0.00 0.00 30.13 3.61
21 22 3.005554 CTCGATTTGTGCTGACATCCTT 58.994 45.455 0.00 0.00 30.13 3.36
23 24 2.621338 TCTCGATTTGTGCTGACATCC 58.379 47.619 0.00 0.00 30.13 3.51
24 25 4.668576 TTTCTCGATTTGTGCTGACATC 57.331 40.909 0.00 0.00 30.13 3.06
25 26 5.437289 TTTTTCTCGATTTGTGCTGACAT 57.563 34.783 0.00 0.00 30.13 3.06
26 27 4.891627 TTTTTCTCGATTTGTGCTGACA 57.108 36.364 0.00 0.00 0.00 3.58
45 46 8.665685 CGCCTAACAGTAGAAGTTATGATTTTT 58.334 33.333 0.00 0.00 31.64 1.94
46 47 7.201617 GCGCCTAACAGTAGAAGTTATGATTTT 60.202 37.037 0.00 0.00 31.64 1.82
47 48 6.258068 GCGCCTAACAGTAGAAGTTATGATTT 59.742 38.462 0.00 0.00 31.64 2.17
48 49 5.753921 GCGCCTAACAGTAGAAGTTATGATT 59.246 40.000 0.00 0.00 31.64 2.57
49 50 5.069251 AGCGCCTAACAGTAGAAGTTATGAT 59.931 40.000 2.29 0.00 31.64 2.45
50 51 4.401519 AGCGCCTAACAGTAGAAGTTATGA 59.598 41.667 2.29 0.00 31.64 2.15
51 52 4.504461 CAGCGCCTAACAGTAGAAGTTATG 59.496 45.833 2.29 0.00 31.64 1.90
52 53 4.401519 TCAGCGCCTAACAGTAGAAGTTAT 59.598 41.667 2.29 0.00 31.64 1.89
53 54 3.760151 TCAGCGCCTAACAGTAGAAGTTA 59.240 43.478 2.29 0.00 0.00 2.24
54 55 2.561419 TCAGCGCCTAACAGTAGAAGTT 59.439 45.455 2.29 0.00 0.00 2.66
55 56 2.168496 TCAGCGCCTAACAGTAGAAGT 58.832 47.619 2.29 0.00 0.00 3.01
56 57 2.941453 TCAGCGCCTAACAGTAGAAG 57.059 50.000 2.29 0.00 0.00 2.85
57 58 3.056107 ACATTCAGCGCCTAACAGTAGAA 60.056 43.478 2.29 0.00 0.00 2.10
58 59 2.496070 ACATTCAGCGCCTAACAGTAGA 59.504 45.455 2.29 0.00 0.00 2.59
59 60 2.893637 ACATTCAGCGCCTAACAGTAG 58.106 47.619 2.29 0.00 0.00 2.57
60 61 3.328382 AACATTCAGCGCCTAACAGTA 57.672 42.857 2.29 0.00 0.00 2.74
61 62 2.185004 AACATTCAGCGCCTAACAGT 57.815 45.000 2.29 0.00 0.00 3.55
62 63 3.058293 TCAAAACATTCAGCGCCTAACAG 60.058 43.478 2.29 0.00 0.00 3.16
63 64 2.881513 TCAAAACATTCAGCGCCTAACA 59.118 40.909 2.29 0.00 0.00 2.41
64 65 3.552604 TCAAAACATTCAGCGCCTAAC 57.447 42.857 2.29 0.00 0.00 2.34
65 66 4.782019 AATCAAAACATTCAGCGCCTAA 57.218 36.364 2.29 0.00 0.00 2.69
66 67 4.782019 AAATCAAAACATTCAGCGCCTA 57.218 36.364 2.29 0.00 0.00 3.93
67 68 3.665745 AAATCAAAACATTCAGCGCCT 57.334 38.095 2.29 0.00 0.00 5.52
68 69 3.120580 CCAAAATCAAAACATTCAGCGCC 60.121 43.478 2.29 0.00 0.00 6.53
69 70 3.494251 ACCAAAATCAAAACATTCAGCGC 59.506 39.130 0.00 0.00 0.00 5.92
70 71 5.655893 AACCAAAATCAAAACATTCAGCG 57.344 34.783 0.00 0.00 0.00 5.18
71 72 7.014092 TCAAACCAAAATCAAAACATTCAGC 57.986 32.000 0.00 0.00 0.00 4.26
106 107 9.531942 CAAGGCATTGCTGTCAATTAATTATTA 57.468 29.630 8.82 0.00 40.74 0.98
107 108 8.042515 ACAAGGCATTGCTGTCAATTAATTATT 58.957 29.630 11.69 0.00 40.74 1.40
108 109 7.558604 ACAAGGCATTGCTGTCAATTAATTAT 58.441 30.769 11.69 0.00 40.74 1.28
109 110 6.934056 ACAAGGCATTGCTGTCAATTAATTA 58.066 32.000 11.69 0.00 40.74 1.40
110 111 5.797051 ACAAGGCATTGCTGTCAATTAATT 58.203 33.333 11.69 0.00 40.74 1.40
111 112 5.410355 ACAAGGCATTGCTGTCAATTAAT 57.590 34.783 11.69 0.00 40.74 1.40
112 113 4.870123 ACAAGGCATTGCTGTCAATTAA 57.130 36.364 11.69 0.00 40.74 1.40
113 114 4.615682 CGAACAAGGCATTGCTGTCAATTA 60.616 41.667 11.69 0.00 40.74 1.40
114 115 3.656559 GAACAAGGCATTGCTGTCAATT 58.343 40.909 11.69 0.00 40.74 2.32
115 116 2.352030 CGAACAAGGCATTGCTGTCAAT 60.352 45.455 11.69 0.00 43.31 2.57
116 117 1.001487 CGAACAAGGCATTGCTGTCAA 60.001 47.619 11.69 0.00 40.27 3.18
117 118 0.592637 CGAACAAGGCATTGCTGTCA 59.407 50.000 11.69 0.00 40.27 3.58
118 119 0.593128 ACGAACAAGGCATTGCTGTC 59.407 50.000 11.69 5.54 40.27 3.51
119 120 1.890876 TACGAACAAGGCATTGCTGT 58.109 45.000 11.69 9.63 40.27 4.40
120 121 2.987413 TTACGAACAAGGCATTGCTG 57.013 45.000 11.69 3.63 40.27 4.41
121 122 4.700213 ACTAATTACGAACAAGGCATTGCT 59.300 37.500 11.69 0.00 40.27 3.91
122 123 4.793216 CACTAATTACGAACAAGGCATTGC 59.207 41.667 11.69 0.00 40.27 3.56
123 124 5.123186 TCCACTAATTACGAACAAGGCATTG 59.877 40.000 10.01 10.01 42.46 2.82
124 125 5.250200 TCCACTAATTACGAACAAGGCATT 58.750 37.500 0.00 0.00 0.00 3.56
125 126 4.839121 TCCACTAATTACGAACAAGGCAT 58.161 39.130 0.00 0.00 0.00 4.40
126 127 4.274602 TCCACTAATTACGAACAAGGCA 57.725 40.909 0.00 0.00 0.00 4.75
127 128 4.453136 TGTTCCACTAATTACGAACAAGGC 59.547 41.667 12.40 0.00 41.08 4.35
128 129 6.548441 TTGTTCCACTAATTACGAACAAGG 57.452 37.500 18.20 0.00 45.45 3.61
131 132 7.789273 TTCTTTGTTCCACTAATTACGAACA 57.211 32.000 11.37 11.37 42.01 3.18
132 133 7.322938 GCTTTCTTTGTTCCACTAATTACGAAC 59.677 37.037 0.00 7.78 36.09 3.95
133 134 7.227910 AGCTTTCTTTGTTCCACTAATTACGAA 59.772 33.333 0.00 0.00 0.00 3.85
134 135 6.708949 AGCTTTCTTTGTTCCACTAATTACGA 59.291 34.615 0.00 0.00 0.00 3.43
135 136 6.899114 AGCTTTCTTTGTTCCACTAATTACG 58.101 36.000 0.00 0.00 0.00 3.18
175 176 8.293699 AGTACACTGTTTTCCTTCTCATTTTT 57.706 30.769 0.00 0.00 0.00 1.94
176 177 7.881775 AGTACACTGTTTTCCTTCTCATTTT 57.118 32.000 0.00 0.00 0.00 1.82
177 178 8.429641 TCTAGTACACTGTTTTCCTTCTCATTT 58.570 33.333 0.00 0.00 0.00 2.32
178 179 7.873505 GTCTAGTACACTGTTTTCCTTCTCATT 59.126 37.037 0.00 0.00 0.00 2.57
179 180 7.379750 GTCTAGTACACTGTTTTCCTTCTCAT 58.620 38.462 0.00 0.00 0.00 2.90
180 181 6.514541 CGTCTAGTACACTGTTTTCCTTCTCA 60.515 42.308 0.00 0.00 0.00 3.27
181 182 5.857517 CGTCTAGTACACTGTTTTCCTTCTC 59.142 44.000 0.00 0.00 0.00 2.87
182 183 5.533903 TCGTCTAGTACACTGTTTTCCTTCT 59.466 40.000 0.00 0.00 0.00 2.85
183 184 5.766222 TCGTCTAGTACACTGTTTTCCTTC 58.234 41.667 0.00 0.00 0.00 3.46
184 185 5.779529 TCGTCTAGTACACTGTTTTCCTT 57.220 39.130 0.00 0.00 0.00 3.36
185 186 5.770417 CTTCGTCTAGTACACTGTTTTCCT 58.230 41.667 0.00 0.00 0.00 3.36
186 187 4.385146 GCTTCGTCTAGTACACTGTTTTCC 59.615 45.833 0.00 0.00 0.00 3.13
187 188 4.980434 TGCTTCGTCTAGTACACTGTTTTC 59.020 41.667 0.00 0.00 0.00 2.29
188 189 4.940463 TGCTTCGTCTAGTACACTGTTTT 58.060 39.130 0.00 0.00 0.00 2.43
189 190 4.579454 TGCTTCGTCTAGTACACTGTTT 57.421 40.909 0.00 0.00 0.00 2.83
190 191 4.380655 GGATGCTTCGTCTAGTACACTGTT 60.381 45.833 0.00 0.00 0.00 3.16
191 192 3.128938 GGATGCTTCGTCTAGTACACTGT 59.871 47.826 0.00 0.00 0.00 3.55
192 193 3.489398 GGGATGCTTCGTCTAGTACACTG 60.489 52.174 0.00 0.00 0.00 3.66
193 194 2.688958 GGGATGCTTCGTCTAGTACACT 59.311 50.000 0.00 0.00 0.00 3.55
194 195 2.426024 TGGGATGCTTCGTCTAGTACAC 59.574 50.000 0.00 0.00 0.00 2.90
195 196 2.426024 GTGGGATGCTTCGTCTAGTACA 59.574 50.000 0.00 0.00 0.00 2.90
206 207 1.905512 GACTACGGGTGGGATGCTT 59.094 57.895 0.00 0.00 0.00 3.91
211 212 1.676635 CAGACGACTACGGGTGGGA 60.677 63.158 0.00 0.00 44.46 4.37
214 215 2.181021 GGCAGACGACTACGGGTG 59.819 66.667 0.00 0.00 44.46 4.61
219 220 2.085320 TCTCAAGAGGCAGACGACTAC 58.915 52.381 0.00 0.00 0.00 2.73
220 221 2.027100 TCTCTCAAGAGGCAGACGACTA 60.027 50.000 7.17 0.00 42.30 2.59
241 242 1.006102 CGCGTTCACTCTGTTCCCT 60.006 57.895 0.00 0.00 0.00 4.20
362 363 0.108804 TCGAGAGGATCAAACACGGC 60.109 55.000 0.00 0.00 37.82 5.68
415 427 0.317519 TCATCGCATACGTACCGCTG 60.318 55.000 14.79 13.55 41.18 5.18
418 430 0.776451 GCTTCATCGCATACGTACCG 59.224 55.000 0.00 4.13 41.18 4.02
551 881 2.594592 GGGCCGAATCATTCCCGG 60.595 66.667 0.00 0.00 45.51 5.73
579 909 3.144506 GGCAGATTCATTCACCGATCAT 58.855 45.455 0.00 0.00 0.00 2.45
580 910 2.564771 GGCAGATTCATTCACCGATCA 58.435 47.619 0.00 0.00 0.00 2.92
581 911 1.876156 GGGCAGATTCATTCACCGATC 59.124 52.381 0.00 0.00 0.00 3.69
582 912 1.492176 AGGGCAGATTCATTCACCGAT 59.508 47.619 0.00 0.00 0.00 4.18
583 913 0.911769 AGGGCAGATTCATTCACCGA 59.088 50.000 0.00 0.00 0.00 4.69
584 914 1.019673 CAGGGCAGATTCATTCACCG 58.980 55.000 0.00 0.00 0.00 4.94
588 918 4.024218 CGAAGATTCAGGGCAGATTCATTC 60.024 45.833 0.00 0.00 0.00 2.67
617 947 1.358759 GCGGCGGTGATATTTTGGG 59.641 57.895 9.78 0.00 0.00 4.12
620 950 1.719117 CGTGCGGCGGTGATATTTT 59.281 52.632 9.78 0.00 36.85 1.82
657 990 1.203187 AGACTCTGCTGGAGGTGGTTA 60.203 52.381 10.91 0.00 45.83 2.85
667 1000 0.678395 AGGTGTGTCAGACTCTGCTG 59.322 55.000 1.31 0.00 37.24 4.41
683 1016 1.294780 CAGAAAGCTGAGCGGAGGT 59.705 57.895 0.00 0.00 45.17 3.85
866 1213 0.620556 TGATGGTTGAGAAGGGAGGC 59.379 55.000 0.00 0.00 0.00 4.70
878 1225 3.448660 TCGAGTGTGAGATGATGATGGTT 59.551 43.478 0.00 0.00 0.00 3.67
879 1226 3.026694 TCGAGTGTGAGATGATGATGGT 58.973 45.455 0.00 0.00 0.00 3.55
883 1230 2.757314 AGCTTCGAGTGTGAGATGATGA 59.243 45.455 0.00 0.00 0.00 2.92
961 1322 2.974698 GCACCACGAGCTGCAGTT 60.975 61.111 16.64 9.79 33.31 3.16
965 1326 3.720193 CAGTGCACCACGAGCTGC 61.720 66.667 14.63 0.00 39.64 5.25
987 1348 2.107750 CCCATCGTGCTGCTCGAT 59.892 61.111 27.72 27.72 46.70 3.59
1125 1499 2.490217 CGCTCGTACAGGTCCCAG 59.510 66.667 0.00 0.00 0.00 4.45
1263 1637 3.296709 GAAGCGGTTGAGGCGGAGA 62.297 63.158 3.70 0.00 35.00 3.71
1636 2010 1.371267 GCCCGCCGTTTTTCTTGAC 60.371 57.895 0.00 0.00 0.00 3.18
1806 2201 2.969238 GCATCGATGGCCACGGAG 60.969 66.667 26.00 16.72 0.00 4.63
2065 2460 2.644992 CTTGGGTTTGCTGTCCGC 59.355 61.111 0.00 0.00 39.77 5.54
2109 2510 1.037579 TCGATCACTGCGACTCCCAT 61.038 55.000 0.00 0.00 32.09 4.00
2132 2540 7.275779 TCGTAGAAATAATTCAGACAAGCAGAC 59.724 37.037 0.00 0.00 38.06 3.51
2157 2565 9.847224 TTCACCCTAATTTAACTAGGAATGATC 57.153 33.333 0.52 0.00 38.63 2.92
2214 2628 2.224426 ACCTAATTCTTGCGTGTGGACA 60.224 45.455 0.00 0.00 0.00 4.02
2235 2656 2.094757 CTGGTCCCACGCTACACACA 62.095 60.000 0.00 0.00 0.00 3.72
2345 2773 2.296471 ACCAACTCGGAGTAGAACACAG 59.704 50.000 11.71 0.00 38.63 3.66
2437 6828 4.546570 CAACTGCGGATCATATCGTCTAA 58.453 43.478 0.00 0.00 0.00 2.10
2453 6844 6.737254 ATATACCATTTATACGGCAACTGC 57.263 37.500 0.00 0.00 41.14 4.40
2454 6845 8.869897 CACTATATACCATTTATACGGCAACTG 58.130 37.037 0.00 0.00 0.00 3.16
2455 6846 8.591072 ACACTATATACCATTTATACGGCAACT 58.409 33.333 0.00 0.00 0.00 3.16
2561 6954 8.242085 TGTGACATGCATAATTTTTCATGTTC 57.758 30.769 13.44 10.89 46.45 3.18
2638 7031 4.626042 ACGCATGAGAATTCTCTACCATC 58.374 43.478 30.45 15.25 43.25 3.51
2700 7094 3.832276 TCATCAAAATTGTTGTAGCCGC 58.168 40.909 4.62 0.00 31.53 6.53
2701 7095 5.286797 CACATCATCAAAATTGTTGTAGCCG 59.713 40.000 4.62 0.00 31.53 5.52
2731 7125 7.602644 ACAACGTCTAATTATCTTGACATGTGT 59.397 33.333 1.15 0.00 32.10 3.72
2742 7136 8.142551 AGGTTATCTCCACAACGTCTAATTATC 58.857 37.037 0.00 0.00 0.00 1.75
2752 7146 5.962433 TCTAAGAAGGTTATCTCCACAACG 58.038 41.667 0.00 0.00 0.00 4.10
2820 7214 9.784531 TGTCAGATGAGTTCTTTAGAAAGATTT 57.215 29.630 5.57 0.00 43.92 2.17
2827 7221 8.204160 TGAGTTTTGTCAGATGAGTTCTTTAGA 58.796 33.333 0.00 0.00 29.93 2.10
2848 7242 8.636213 AGATTGATGAAATTGACAAACTGAGTT 58.364 29.630 0.00 0.00 0.00 3.01
2853 7247 9.635520 GATTGAGATTGATGAAATTGACAAACT 57.364 29.630 0.00 0.00 0.00 2.66
2878 7272 8.440059 CAATACTTATGCGACAGTAAACAAAGA 58.560 33.333 0.00 0.00 0.00 2.52
2888 7282 6.893958 AAGAAGTCAATACTTATGCGACAG 57.106 37.500 0.00 0.00 46.09 3.51
2891 7285 7.039270 TGCTTAAGAAGTCAATACTTATGCGA 58.961 34.615 6.67 0.00 46.09 5.10
2909 7303 7.615582 TGACCAGAATTTGTATCTGCTTAAG 57.384 36.000 0.00 0.00 42.36 1.85
2914 7308 5.008415 CCTCATGACCAGAATTTGTATCTGC 59.992 44.000 0.00 0.00 42.36 4.26
2915 7309 5.530171 CCCTCATGACCAGAATTTGTATCTG 59.470 44.000 0.00 0.00 43.15 2.90
2926 7320 1.900351 CGAAGCCCTCATGACCAGA 59.100 57.895 0.00 0.00 0.00 3.86
2960 7354 1.665679 CAACGAACTTCGCCTATGCAT 59.334 47.619 11.15 3.79 45.12 3.96
2969 7363 3.280775 GTTTCTTGCTCAACGAACTTCG 58.719 45.455 9.68 9.68 46.93 3.79
2975 7369 1.503818 GCCGGTTTCTTGCTCAACGA 61.504 55.000 1.90 0.00 0.00 3.85
3000 7394 5.698089 AGATGCGTATCACTTTGATGGTATG 59.302 40.000 16.11 0.00 37.70 2.39
3004 7398 5.755375 AGTTAGATGCGTATCACTTTGATGG 59.245 40.000 16.11 0.00 37.70 3.51
3020 7414 5.449588 CCTTGTGCAATTGCCTAGTTAGATG 60.450 44.000 26.94 8.30 41.18 2.90
3021 7415 4.641989 CCTTGTGCAATTGCCTAGTTAGAT 59.358 41.667 26.94 0.00 41.18 1.98
3022 7416 4.009675 CCTTGTGCAATTGCCTAGTTAGA 58.990 43.478 26.94 3.39 41.18 2.10
3023 7417 3.758554 ACCTTGTGCAATTGCCTAGTTAG 59.241 43.478 26.94 14.49 41.18 2.34
3024 7418 3.761897 ACCTTGTGCAATTGCCTAGTTA 58.238 40.909 26.94 4.79 41.18 2.24
3025 7419 2.597455 ACCTTGTGCAATTGCCTAGTT 58.403 42.857 26.94 10.55 41.18 2.24
3026 7420 2.292828 ACCTTGTGCAATTGCCTAGT 57.707 45.000 26.94 14.17 41.18 2.57
3027 7421 2.353011 CCAACCTTGTGCAATTGCCTAG 60.353 50.000 26.94 21.02 41.18 3.02
3028 7422 1.617850 CCAACCTTGTGCAATTGCCTA 59.382 47.619 26.94 13.38 41.18 3.93
3029 7423 0.393820 CCAACCTTGTGCAATTGCCT 59.606 50.000 26.94 0.79 41.18 4.75
3030 7424 0.106521 ACCAACCTTGTGCAATTGCC 59.893 50.000 26.94 18.11 41.18 4.52
3031 7425 2.810439 TACCAACCTTGTGCAATTGC 57.190 45.000 23.69 23.69 42.50 3.56
3032 7426 5.295950 TCATTTACCAACCTTGTGCAATTG 58.704 37.500 0.00 0.00 0.00 2.32
3033 7427 5.304101 TCTCATTTACCAACCTTGTGCAATT 59.696 36.000 0.00 0.00 0.00 2.32
3034 7428 4.832266 TCTCATTTACCAACCTTGTGCAAT 59.168 37.500 0.00 0.00 0.00 3.56
3035 7429 4.211125 TCTCATTTACCAACCTTGTGCAA 58.789 39.130 0.00 0.00 0.00 4.08
3036 7430 3.826524 TCTCATTTACCAACCTTGTGCA 58.173 40.909 0.00 0.00 0.00 4.57
3037 7431 4.846779 TTCTCATTTACCAACCTTGTGC 57.153 40.909 0.00 0.00 0.00 4.57
3038 7432 7.219484 AGAATTCTCATTTACCAACCTTGTG 57.781 36.000 0.88 0.00 0.00 3.33
3039 7433 7.942341 TGTAGAATTCTCATTTACCAACCTTGT 59.058 33.333 12.24 0.00 0.00 3.16
3040 7434 8.335532 TGTAGAATTCTCATTTACCAACCTTG 57.664 34.615 12.24 0.00 0.00 3.61
3041 7435 8.934023 TTGTAGAATTCTCATTTACCAACCTT 57.066 30.769 12.24 0.00 0.00 3.50
3042 7436 8.934023 TTTGTAGAATTCTCATTTACCAACCT 57.066 30.769 12.24 0.00 0.00 3.50
3043 7437 9.573133 CATTTGTAGAATTCTCATTTACCAACC 57.427 33.333 12.24 0.00 0.00 3.77
3044 7438 9.573133 CCATTTGTAGAATTCTCATTTACCAAC 57.427 33.333 12.24 1.69 0.00 3.77
3045 7439 8.748412 CCCATTTGTAGAATTCTCATTTACCAA 58.252 33.333 12.24 2.90 0.00 3.67
3046 7440 7.147915 GCCCATTTGTAGAATTCTCATTTACCA 60.148 37.037 12.24 0.00 0.00 3.25
3047 7441 7.203218 GCCCATTTGTAGAATTCTCATTTACC 58.797 38.462 12.24 0.00 0.00 2.85
3048 7442 7.068716 AGGCCCATTTGTAGAATTCTCATTTAC 59.931 37.037 12.24 4.76 0.00 2.01
3049 7443 7.125391 AGGCCCATTTGTAGAATTCTCATTTA 58.875 34.615 12.24 0.00 0.00 1.40
3050 7444 5.960202 AGGCCCATTTGTAGAATTCTCATTT 59.040 36.000 12.24 0.00 0.00 2.32
3051 7445 5.522641 AGGCCCATTTGTAGAATTCTCATT 58.477 37.500 12.24 0.00 0.00 2.57
3052 7446 5.134725 AGGCCCATTTGTAGAATTCTCAT 57.865 39.130 12.24 0.00 0.00 2.90
3053 7447 4.591321 AGGCCCATTTGTAGAATTCTCA 57.409 40.909 12.24 7.33 0.00 3.27
3054 7448 7.404671 TTTTAGGCCCATTTGTAGAATTCTC 57.595 36.000 12.24 4.68 0.00 2.87
3055 7449 7.633553 GCATTTTAGGCCCATTTGTAGAATTCT 60.634 37.037 13.56 13.56 0.00 2.40
3056 7450 6.479990 GCATTTTAGGCCCATTTGTAGAATTC 59.520 38.462 0.00 0.00 0.00 2.17
3057 7451 6.156775 AGCATTTTAGGCCCATTTGTAGAATT 59.843 34.615 0.00 0.00 0.00 2.17
3058 7452 5.662657 AGCATTTTAGGCCCATTTGTAGAAT 59.337 36.000 0.00 0.00 0.00 2.40
3059 7453 5.022787 AGCATTTTAGGCCCATTTGTAGAA 58.977 37.500 0.00 0.00 0.00 2.10
3060 7454 4.402155 CAGCATTTTAGGCCCATTTGTAGA 59.598 41.667 0.00 0.00 0.00 2.59
3061 7455 4.160252 ACAGCATTTTAGGCCCATTTGTAG 59.840 41.667 0.00 0.00 0.00 2.74
3062 7456 4.081752 CACAGCATTTTAGGCCCATTTGTA 60.082 41.667 0.00 0.00 0.00 2.41
3063 7457 2.905736 ACAGCATTTTAGGCCCATTTGT 59.094 40.909 0.00 0.00 0.00 2.83
3064 7458 3.055963 TCACAGCATTTTAGGCCCATTTG 60.056 43.478 0.00 0.00 0.00 2.32
3065 7459 3.172339 TCACAGCATTTTAGGCCCATTT 58.828 40.909 0.00 0.00 0.00 2.32
3066 7460 2.762327 CTCACAGCATTTTAGGCCCATT 59.238 45.455 0.00 0.00 0.00 3.16
3067 7461 2.025037 TCTCACAGCATTTTAGGCCCAT 60.025 45.455 0.00 0.00 0.00 4.00
3068 7462 1.354031 TCTCACAGCATTTTAGGCCCA 59.646 47.619 0.00 0.00 0.00 5.36
3069 7463 2.128771 TCTCACAGCATTTTAGGCCC 57.871 50.000 0.00 0.00 0.00 5.80
3070 7464 3.084786 AGTTCTCACAGCATTTTAGGCC 58.915 45.455 0.00 0.00 0.00 5.19
3071 7465 3.127721 GGAGTTCTCACAGCATTTTAGGC 59.872 47.826 2.24 0.00 0.00 3.93
3072 7466 4.326826 TGGAGTTCTCACAGCATTTTAGG 58.673 43.478 2.24 0.00 0.00 2.69
3073 7467 5.702670 TCTTGGAGTTCTCACAGCATTTTAG 59.297 40.000 2.24 0.00 0.00 1.85
3074 7468 5.620206 TCTTGGAGTTCTCACAGCATTTTA 58.380 37.500 2.24 0.00 0.00 1.52
3075 7469 4.464008 TCTTGGAGTTCTCACAGCATTTT 58.536 39.130 2.24 0.00 0.00 1.82
3076 7470 4.090761 TCTTGGAGTTCTCACAGCATTT 57.909 40.909 2.24 0.00 0.00 2.32
3077 7471 3.777106 TCTTGGAGTTCTCACAGCATT 57.223 42.857 2.24 0.00 0.00 3.56
3078 7472 3.777106 TTCTTGGAGTTCTCACAGCAT 57.223 42.857 2.24 0.00 0.00 3.79
3079 7473 3.558931 TTTCTTGGAGTTCTCACAGCA 57.441 42.857 2.24 0.00 0.00 4.41
3080 7474 4.576463 TCTTTTTCTTGGAGTTCTCACAGC 59.424 41.667 2.24 0.00 0.00 4.40
3081 7475 5.819901 ACTCTTTTTCTTGGAGTTCTCACAG 59.180 40.000 2.24 0.00 37.04 3.66
3082 7476 5.745227 ACTCTTTTTCTTGGAGTTCTCACA 58.255 37.500 2.24 0.00 37.04 3.58
3083 7477 7.210873 TCTACTCTTTTTCTTGGAGTTCTCAC 58.789 38.462 0.00 0.00 40.29 3.51
3084 7478 7.361457 TCTACTCTTTTTCTTGGAGTTCTCA 57.639 36.000 0.00 0.00 40.29 3.27
3085 7479 8.552865 GTTTCTACTCTTTTTCTTGGAGTTCTC 58.447 37.037 0.00 0.00 40.29 2.87
3086 7480 8.047310 TGTTTCTACTCTTTTTCTTGGAGTTCT 58.953 33.333 0.00 0.00 40.29 3.01
3087 7481 8.209917 TGTTTCTACTCTTTTTCTTGGAGTTC 57.790 34.615 0.00 0.00 40.29 3.01
3088 7482 8.459635 GTTGTTTCTACTCTTTTTCTTGGAGTT 58.540 33.333 0.00 0.00 40.29 3.01
3089 7483 7.067129 GGTTGTTTCTACTCTTTTTCTTGGAGT 59.933 37.037 0.00 0.00 42.13 3.85
3090 7484 7.418408 GGTTGTTTCTACTCTTTTTCTTGGAG 58.582 38.462 0.00 0.00 0.00 3.86
3091 7485 6.320418 GGGTTGTTTCTACTCTTTTTCTTGGA 59.680 38.462 0.00 0.00 0.00 3.53
3092 7486 6.096282 TGGGTTGTTTCTACTCTTTTTCTTGG 59.904 38.462 0.00 0.00 0.00 3.61
3093 7487 7.095695 TGGGTTGTTTCTACTCTTTTTCTTG 57.904 36.000 0.00 0.00 0.00 3.02
3094 7488 7.712204 TTGGGTTGTTTCTACTCTTTTTCTT 57.288 32.000 0.00 0.00 0.00 2.52
3095 7489 7.780271 AGATTGGGTTGTTTCTACTCTTTTTCT 59.220 33.333 0.00 0.00 0.00 2.52
3096 7490 7.941919 AGATTGGGTTGTTTCTACTCTTTTTC 58.058 34.615 0.00 0.00 0.00 2.29
3097 7491 7.780271 AGAGATTGGGTTGTTTCTACTCTTTTT 59.220 33.333 0.00 0.00 0.00 1.94
3098 7492 7.290813 AGAGATTGGGTTGTTTCTACTCTTTT 58.709 34.615 0.00 0.00 0.00 2.27
3099 7493 6.842676 AGAGATTGGGTTGTTTCTACTCTTT 58.157 36.000 0.00 0.00 0.00 2.52
3100 7494 6.441088 AGAGATTGGGTTGTTTCTACTCTT 57.559 37.500 0.00 0.00 0.00 2.85
3101 7495 6.043854 GAGAGATTGGGTTGTTTCTACTCT 57.956 41.667 0.00 0.00 35.39 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.