Multiple sequence alignment - TraesCS3B01G447000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G447000 | chr3B | 100.000 | 6743 | 0 | 0 | 1 | 6743 | 686335917 | 686342659 | 0.000000e+00 | 12453.0 |
1 | TraesCS3B01G447000 | chr3B | 84.062 | 320 | 37 | 7 | 1 | 319 | 520455240 | 520455546 | 5.110000e-76 | 296.0 |
2 | TraesCS3B01G447000 | chr3B | 94.444 | 54 | 1 | 2 | 2211 | 2264 | 815456118 | 815456169 | 1.560000e-11 | 82.4 |
3 | TraesCS3B01G447000 | chr3D | 94.221 | 4257 | 185 | 34 | 903 | 5138 | 520713919 | 520718135 | 0.000000e+00 | 6442.0 |
4 | TraesCS3B01G447000 | chr3D | 85.332 | 1534 | 87 | 49 | 5285 | 6740 | 520718243 | 520719716 | 0.000000e+00 | 1459.0 |
5 | TraesCS3B01G447000 | chr3D | 88.922 | 334 | 15 | 10 | 1 | 327 | 520713588 | 520713906 | 6.340000e-105 | 392.0 |
6 | TraesCS3B01G447000 | chr3A | 95.365 | 3711 | 131 | 22 | 903 | 4585 | 656100215 | 656103912 | 0.000000e+00 | 5862.0 |
7 | TraesCS3B01G447000 | chr3A | 82.679 | 1553 | 92 | 74 | 5285 | 6740 | 656104621 | 656106093 | 0.000000e+00 | 1214.0 |
8 | TraesCS3B01G447000 | chr3A | 89.399 | 566 | 37 | 13 | 4522 | 5086 | 656103913 | 656104456 | 0.000000e+00 | 691.0 |
9 | TraesCS3B01G447000 | chr7B | 86.917 | 986 | 85 | 24 | 1241 | 2208 | 624719729 | 624718770 | 0.000000e+00 | 1066.0 |
10 | TraesCS3B01G447000 | chr7B | 87.653 | 899 | 75 | 15 | 2309 | 3194 | 624718706 | 624717831 | 0.000000e+00 | 1013.0 |
11 | TraesCS3B01G447000 | chr7B | 92.377 | 223 | 17 | 0 | 1009 | 1231 | 624722960 | 624722738 | 1.090000e-82 | 318.0 |
12 | TraesCS3B01G447000 | chr7B | 93.939 | 198 | 12 | 0 | 3190 | 3387 | 624712207 | 624712010 | 3.950000e-77 | 300.0 |
13 | TraesCS3B01G447000 | chr7B | 94.792 | 96 | 5 | 0 | 3421 | 3516 | 624711327 | 624711232 | 4.210000e-32 | 150.0 |
14 | TraesCS3B01G447000 | chr2B | 95.985 | 523 | 19 | 2 | 325 | 845 | 366027321 | 366026799 | 0.000000e+00 | 848.0 |
15 | TraesCS3B01G447000 | chr2B | 94.545 | 55 | 1 | 2 | 2210 | 2263 | 136176052 | 136176105 | 4.330000e-12 | 84.2 |
16 | TraesCS3B01G447000 | chrUn | 95.220 | 523 | 23 | 2 | 321 | 841 | 50866132 | 50866654 | 0.000000e+00 | 826.0 |
17 | TraesCS3B01G447000 | chrUn | 95.220 | 523 | 23 | 2 | 321 | 841 | 286938445 | 286938967 | 0.000000e+00 | 826.0 |
18 | TraesCS3B01G447000 | chr4A | 95.712 | 513 | 22 | 0 | 329 | 841 | 714256962 | 714256450 | 0.000000e+00 | 826.0 |
19 | TraesCS3B01G447000 | chr2D | 91.522 | 519 | 42 | 2 | 328 | 846 | 525723662 | 525723146 | 0.000000e+00 | 713.0 |
20 | TraesCS3B01G447000 | chr2A | 89.675 | 523 | 52 | 2 | 321 | 841 | 43128015 | 43128537 | 0.000000e+00 | 665.0 |
21 | TraesCS3B01G447000 | chr2A | 89.017 | 519 | 57 | 0 | 328 | 846 | 759580244 | 759580762 | 1.590000e-180 | 643.0 |
22 | TraesCS3B01G447000 | chr2A | 94.545 | 55 | 1 | 2 | 2210 | 2263 | 84959106 | 84959159 | 4.330000e-12 | 84.2 |
23 | TraesCS3B01G447000 | chr2A | 94.545 | 55 | 1 | 2 | 2210 | 2263 | 84974327 | 84974380 | 4.330000e-12 | 84.2 |
24 | TraesCS3B01G447000 | chr4D | 89.595 | 519 | 52 | 2 | 325 | 841 | 300264530 | 300264012 | 0.000000e+00 | 658.0 |
25 | TraesCS3B01G447000 | chr4D | 89.017 | 519 | 56 | 1 | 329 | 846 | 383769221 | 383769739 | 5.700000e-180 | 641.0 |
26 | TraesCS3B01G447000 | chr4D | 92.683 | 164 | 10 | 1 | 6447 | 6610 | 463693104 | 463693265 | 1.130000e-57 | 235.0 |
27 | TraesCS3B01G447000 | chr4D | 94.340 | 53 | 1 | 2 | 2210 | 2261 | 139045066 | 139045015 | 5.610000e-11 | 80.5 |
28 | TraesCS3B01G447000 | chr7A | 86.585 | 328 | 27 | 8 | 4243 | 4554 | 657423728 | 657423402 | 5.010000e-91 | 346.0 |
29 | TraesCS3B01G447000 | chr7A | 84.790 | 309 | 42 | 3 | 5151 | 5456 | 657422746 | 657422440 | 8.500000e-79 | 305.0 |
30 | TraesCS3B01G447000 | chr7A | 82.090 | 134 | 6 | 6 | 4117 | 4249 | 657423928 | 657423812 | 1.550000e-16 | 99.0 |
31 | TraesCS3B01G447000 | chr7D | 93.069 | 202 | 5 | 2 | 6447 | 6648 | 549768596 | 549768788 | 3.080000e-73 | 287.0 |
32 | TraesCS3B01G447000 | chr6D | 91.558 | 154 | 4 | 4 | 6495 | 6648 | 469343766 | 469343622 | 3.190000e-48 | 204.0 |
33 | TraesCS3B01G447000 | chr5D | 97.917 | 48 | 1 | 0 | 2215 | 2262 | 458811245 | 458811292 | 4.330000e-12 | 84.2 |
34 | TraesCS3B01G447000 | chr5B | 96.000 | 50 | 2 | 0 | 2218 | 2267 | 27821529 | 27821578 | 1.560000e-11 | 82.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G447000 | chr3B | 686335917 | 686342659 | 6742 | False | 12453.000000 | 12453 | 100.000000 | 1 | 6743 | 1 | chr3B.!!$F2 | 6742 |
1 | TraesCS3B01G447000 | chr3D | 520713588 | 520719716 | 6128 | False | 2764.333333 | 6442 | 89.491667 | 1 | 6740 | 3 | chr3D.!!$F1 | 6739 |
2 | TraesCS3B01G447000 | chr3A | 656100215 | 656106093 | 5878 | False | 2589.000000 | 5862 | 89.147667 | 903 | 6740 | 3 | chr3A.!!$F1 | 5837 |
3 | TraesCS3B01G447000 | chr7B | 624717831 | 624722960 | 5129 | True | 799.000000 | 1066 | 88.982333 | 1009 | 3194 | 3 | chr7B.!!$R2 | 2185 |
4 | TraesCS3B01G447000 | chr7B | 624711232 | 624712207 | 975 | True | 225.000000 | 300 | 94.365500 | 3190 | 3516 | 2 | chr7B.!!$R1 | 326 |
5 | TraesCS3B01G447000 | chr2B | 366026799 | 366027321 | 522 | True | 848.000000 | 848 | 95.985000 | 325 | 845 | 1 | chr2B.!!$R1 | 520 |
6 | TraesCS3B01G447000 | chrUn | 50866132 | 50866654 | 522 | False | 826.000000 | 826 | 95.220000 | 321 | 841 | 1 | chrUn.!!$F1 | 520 |
7 | TraesCS3B01G447000 | chrUn | 286938445 | 286938967 | 522 | False | 826.000000 | 826 | 95.220000 | 321 | 841 | 1 | chrUn.!!$F2 | 520 |
8 | TraesCS3B01G447000 | chr4A | 714256450 | 714256962 | 512 | True | 826.000000 | 826 | 95.712000 | 329 | 841 | 1 | chr4A.!!$R1 | 512 |
9 | TraesCS3B01G447000 | chr2D | 525723146 | 525723662 | 516 | True | 713.000000 | 713 | 91.522000 | 328 | 846 | 1 | chr2D.!!$R1 | 518 |
10 | TraesCS3B01G447000 | chr2A | 43128015 | 43128537 | 522 | False | 665.000000 | 665 | 89.675000 | 321 | 841 | 1 | chr2A.!!$F1 | 520 |
11 | TraesCS3B01G447000 | chr2A | 759580244 | 759580762 | 518 | False | 643.000000 | 643 | 89.017000 | 328 | 846 | 1 | chr2A.!!$F4 | 518 |
12 | TraesCS3B01G447000 | chr4D | 300264012 | 300264530 | 518 | True | 658.000000 | 658 | 89.595000 | 325 | 841 | 1 | chr4D.!!$R2 | 516 |
13 | TraesCS3B01G447000 | chr4D | 383769221 | 383769739 | 518 | False | 641.000000 | 641 | 89.017000 | 329 | 846 | 1 | chr4D.!!$F1 | 517 |
14 | TraesCS3B01G447000 | chr7A | 657422440 | 657423928 | 1488 | True | 250.000000 | 346 | 84.488333 | 4117 | 5456 | 3 | chr7A.!!$R1 | 1339 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
211 | 219 | 0.324368 | AGTGGTCTAGTCCATGGCGA | 60.324 | 55.000 | 12.01 | 0.00 | 39.81 | 5.54 | F |
216 | 224 | 0.390492 | TCTAGTCCATGGCGATGCTG | 59.610 | 55.000 | 6.96 | 0.00 | 0.00 | 4.41 | F |
326 | 334 | 0.744414 | GCCTCGCAGGATTAGCAACA | 60.744 | 55.000 | 6.40 | 0.00 | 37.67 | 3.33 | F |
1547 | 4577 | 0.179124 | GCGTCTTCTACTGCTGGGAG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 | F |
2875 | 5927 | 1.965643 | ACTTTGCAAGGCATGTCATGT | 59.034 | 42.857 | 14.26 | 0.00 | 38.76 | 3.21 | F |
4053 | 7758 | 0.307760 | GTTCAAGGTCACAGCCGTTG | 59.692 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 | F |
5090 | 8986 | 0.031314 | ATCATAGTCAGCAGCGACGG | 59.969 | 55.000 | 10.45 | 6.24 | 40.98 | 4.79 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1212 | 1229 | 0.731994 | GTACCGACGAGGAAGGAGAC | 59.268 | 60.000 | 8.56 | 0.00 | 45.00 | 3.36 | R |
1425 | 4455 | 2.915659 | AAGACCGCGTGGAGACCA | 60.916 | 61.111 | 24.59 | 0.00 | 39.21 | 4.02 | R |
2306 | 5347 | 0.991146 | TGCATGTGGGAGGCTTAAGA | 59.009 | 50.000 | 6.67 | 0.00 | 30.62 | 2.10 | R |
3278 | 6333 | 1.035932 | CCCCATCTGGAAGCTGCAAG | 61.036 | 60.000 | 1.02 | 0.00 | 37.39 | 4.01 | R |
4505 | 8314 | 1.099879 | GGTCATGAGGCATGTGGAGC | 61.100 | 60.000 | 0.00 | 0.00 | 41.98 | 4.70 | R |
5154 | 9051 | 0.033796 | AGGAACCATGCACCATGAGG | 60.034 | 55.000 | 6.77 | 0.00 | 43.81 | 3.86 | R |
6236 | 10335 | 0.103208 | AGTTTCCGCCTCGATGCTAG | 59.897 | 55.000 | 11.00 | 2.51 | 0.00 | 3.42 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 2.040043 | CTCCCTGCCTCCTCCCAT | 60.040 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
26 | 27 | 0.563173 | CCTCCTCCCATCCTACTCCA | 59.437 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
30 | 31 | 0.755686 | CTCCCATCCTACTCCAGCAC | 59.244 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
71 | 72 | 4.740822 | AGGCCACCCCAACATCGC | 62.741 | 66.667 | 5.01 | 0.00 | 35.39 | 4.58 |
90 | 91 | 1.738099 | GTTGCGCATCCTCGTCAGT | 60.738 | 57.895 | 12.75 | 0.00 | 0.00 | 3.41 |
94 | 95 | 0.807667 | GCGCATCCTCGTCAGTGAAT | 60.808 | 55.000 | 0.30 | 0.00 | 0.00 | 2.57 |
96 | 97 | 1.293924 | GCATCCTCGTCAGTGAATGG | 58.706 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
100 | 101 | 1.296392 | CTCGTCAGTGAATGGGCCA | 59.704 | 57.895 | 9.61 | 9.61 | 0.00 | 5.36 |
206 | 214 | 4.799715 | AGCTAGTAGTGGTCTAGTCCAT | 57.200 | 45.455 | 12.01 | 4.48 | 39.81 | 3.41 |
208 | 216 | 3.570550 | GCTAGTAGTGGTCTAGTCCATGG | 59.429 | 52.174 | 12.01 | 4.97 | 39.81 | 3.66 |
209 | 217 | 2.389715 | AGTAGTGGTCTAGTCCATGGC | 58.610 | 52.381 | 12.01 | 2.00 | 39.81 | 4.40 |
210 | 218 | 1.067212 | GTAGTGGTCTAGTCCATGGCG | 59.933 | 57.143 | 12.01 | 0.00 | 39.81 | 5.69 |
211 | 219 | 0.324368 | AGTGGTCTAGTCCATGGCGA | 60.324 | 55.000 | 12.01 | 0.00 | 39.81 | 5.54 |
212 | 220 | 0.753262 | GTGGTCTAGTCCATGGCGAT | 59.247 | 55.000 | 12.01 | 0.00 | 39.81 | 4.58 |
213 | 221 | 0.752658 | TGGTCTAGTCCATGGCGATG | 59.247 | 55.000 | 6.96 | 1.01 | 31.96 | 3.84 |
214 | 222 | 0.601311 | GGTCTAGTCCATGGCGATGC | 60.601 | 60.000 | 6.96 | 0.00 | 0.00 | 3.91 |
215 | 223 | 0.390860 | GTCTAGTCCATGGCGATGCT | 59.609 | 55.000 | 6.96 | 2.55 | 0.00 | 3.79 |
216 | 224 | 0.390492 | TCTAGTCCATGGCGATGCTG | 59.610 | 55.000 | 6.96 | 0.00 | 0.00 | 4.41 |
227 | 235 | 1.363744 | GCGATGCTGCCACTATATCC | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
228 | 236 | 1.066573 | GCGATGCTGCCACTATATCCT | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
229 | 237 | 2.886081 | CGATGCTGCCACTATATCCTC | 58.114 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
230 | 238 | 2.232208 | CGATGCTGCCACTATATCCTCA | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
231 | 239 | 3.118847 | CGATGCTGCCACTATATCCTCAT | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
232 | 240 | 3.969287 | TGCTGCCACTATATCCTCATC | 57.031 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
233 | 241 | 2.568956 | TGCTGCCACTATATCCTCATCC | 59.431 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
234 | 242 | 2.836981 | GCTGCCACTATATCCTCATCCT | 59.163 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
235 | 243 | 3.262915 | GCTGCCACTATATCCTCATCCTT | 59.737 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
305 | 313 | 3.350377 | CGATCTCCTCGCCTCCTC | 58.650 | 66.667 | 0.00 | 0.00 | 41.14 | 3.71 |
318 | 326 | 4.841617 | TCCTCGGCCTCGCAGGAT | 62.842 | 66.667 | 0.00 | 0.00 | 37.67 | 3.24 |
319 | 327 | 3.854669 | CCTCGGCCTCGCAGGATT | 61.855 | 66.667 | 0.00 | 0.00 | 37.67 | 3.01 |
320 | 328 | 2.498941 | CCTCGGCCTCGCAGGATTA | 61.499 | 63.158 | 0.00 | 0.00 | 37.67 | 1.75 |
321 | 329 | 1.006805 | CTCGGCCTCGCAGGATTAG | 60.007 | 63.158 | 0.00 | 0.00 | 37.67 | 1.73 |
322 | 330 | 2.663188 | CGGCCTCGCAGGATTAGC | 60.663 | 66.667 | 0.00 | 0.00 | 37.67 | 3.09 |
323 | 331 | 2.505982 | GGCCTCGCAGGATTAGCA | 59.494 | 61.111 | 0.00 | 0.00 | 37.67 | 3.49 |
324 | 332 | 1.153168 | GGCCTCGCAGGATTAGCAA | 60.153 | 57.895 | 0.00 | 0.00 | 37.67 | 3.91 |
325 | 333 | 1.440145 | GGCCTCGCAGGATTAGCAAC | 61.440 | 60.000 | 0.00 | 0.00 | 37.67 | 4.17 |
326 | 334 | 0.744414 | GCCTCGCAGGATTAGCAACA | 60.744 | 55.000 | 6.40 | 0.00 | 37.67 | 3.33 |
487 | 497 | 4.689612 | TTGCTTCCCTACACTCATATCC | 57.310 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
583 | 593 | 1.559219 | TCCATTGATGTCGGACACCAT | 59.441 | 47.619 | 13.92 | 2.94 | 0.00 | 3.55 |
675 | 686 | 0.883833 | CGCATGGGCTTCAAGACTTT | 59.116 | 50.000 | 0.00 | 0.00 | 38.10 | 2.66 |
728 | 739 | 1.799157 | ATGCCCCCAAGTAGTTGCCA | 61.799 | 55.000 | 4.65 | 0.14 | 31.64 | 4.92 |
841 | 852 | 1.278985 | AGGAATCCAGCGATGAACACA | 59.721 | 47.619 | 0.06 | 0.00 | 0.00 | 3.72 |
846 | 857 | 1.229975 | CCAGCGATGAACACACTGCA | 61.230 | 55.000 | 0.06 | 0.00 | 0.00 | 4.41 |
847 | 858 | 0.800631 | CAGCGATGAACACACTGCAT | 59.199 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
848 | 859 | 1.081892 | AGCGATGAACACACTGCATC | 58.918 | 50.000 | 0.00 | 0.00 | 36.07 | 3.91 |
849 | 860 | 1.081892 | GCGATGAACACACTGCATCT | 58.918 | 50.000 | 0.00 | 0.00 | 37.00 | 2.90 |
850 | 861 | 1.466167 | GCGATGAACACACTGCATCTT | 59.534 | 47.619 | 0.00 | 0.00 | 37.00 | 2.40 |
851 | 862 | 2.475187 | GCGATGAACACACTGCATCTTC | 60.475 | 50.000 | 0.00 | 0.00 | 37.00 | 2.87 |
852 | 863 | 2.738314 | CGATGAACACACTGCATCTTCA | 59.262 | 45.455 | 0.00 | 0.00 | 37.00 | 3.02 |
853 | 864 | 3.424039 | CGATGAACACACTGCATCTTCAC | 60.424 | 47.826 | 0.00 | 0.00 | 37.00 | 3.18 |
854 | 865 | 2.221169 | TGAACACACTGCATCTTCACC | 58.779 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
855 | 866 | 2.221169 | GAACACACTGCATCTTCACCA | 58.779 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
856 | 867 | 1.888215 | ACACACTGCATCTTCACCAG | 58.112 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
857 | 868 | 1.417517 | ACACACTGCATCTTCACCAGA | 59.582 | 47.619 | 0.00 | 0.00 | 35.33 | 3.86 |
858 | 869 | 2.158769 | ACACACTGCATCTTCACCAGAA | 60.159 | 45.455 | 0.00 | 0.00 | 34.16 | 3.02 |
859 | 870 | 3.079578 | CACACTGCATCTTCACCAGAAT | 58.920 | 45.455 | 0.00 | 0.00 | 34.16 | 2.40 |
860 | 871 | 3.079578 | ACACTGCATCTTCACCAGAATG | 58.920 | 45.455 | 0.00 | 0.00 | 34.16 | 2.67 |
861 | 872 | 3.079578 | CACTGCATCTTCACCAGAATGT | 58.920 | 45.455 | 0.00 | 0.00 | 34.16 | 2.71 |
862 | 873 | 3.079578 | ACTGCATCTTCACCAGAATGTG | 58.920 | 45.455 | 0.00 | 0.00 | 34.16 | 3.21 |
863 | 874 | 1.814394 | TGCATCTTCACCAGAATGTGC | 59.186 | 47.619 | 0.00 | 0.00 | 41.01 | 4.57 |
864 | 875 | 2.089980 | GCATCTTCACCAGAATGTGCT | 58.910 | 47.619 | 0.00 | 0.00 | 39.22 | 4.40 |
865 | 876 | 2.490903 | GCATCTTCACCAGAATGTGCTT | 59.509 | 45.455 | 0.00 | 0.00 | 39.22 | 3.91 |
866 | 877 | 3.427233 | GCATCTTCACCAGAATGTGCTTC | 60.427 | 47.826 | 0.00 | 0.00 | 39.22 | 3.86 |
867 | 878 | 2.783135 | TCTTCACCAGAATGTGCTTCC | 58.217 | 47.619 | 0.00 | 0.00 | 36.17 | 3.46 |
868 | 879 | 2.106338 | TCTTCACCAGAATGTGCTTCCA | 59.894 | 45.455 | 0.00 | 0.00 | 36.17 | 3.53 |
869 | 880 | 2.885135 | TCACCAGAATGTGCTTCCAT | 57.115 | 45.000 | 0.00 | 0.00 | 36.17 | 3.41 |
870 | 881 | 3.998913 | TCACCAGAATGTGCTTCCATA | 57.001 | 42.857 | 0.00 | 0.00 | 36.17 | 2.74 |
871 | 882 | 4.508551 | TCACCAGAATGTGCTTCCATAT | 57.491 | 40.909 | 0.00 | 0.00 | 36.17 | 1.78 |
872 | 883 | 4.858850 | TCACCAGAATGTGCTTCCATATT | 58.141 | 39.130 | 0.00 | 0.00 | 35.76 | 1.28 |
873 | 884 | 4.883585 | TCACCAGAATGTGCTTCCATATTC | 59.116 | 41.667 | 5.39 | 5.39 | 44.93 | 1.75 |
879 | 890 | 6.690194 | GAATGTGCTTCCATATTCTGTCTT | 57.310 | 37.500 | 6.08 | 0.00 | 42.74 | 3.01 |
880 | 891 | 7.093322 | GAATGTGCTTCCATATTCTGTCTTT | 57.907 | 36.000 | 6.08 | 0.00 | 42.74 | 2.52 |
881 | 892 | 6.690194 | ATGTGCTTCCATATTCTGTCTTTC | 57.310 | 37.500 | 0.00 | 0.00 | 0.00 | 2.62 |
882 | 893 | 5.559770 | TGTGCTTCCATATTCTGTCTTTCA | 58.440 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
883 | 894 | 5.645067 | TGTGCTTCCATATTCTGTCTTTCAG | 59.355 | 40.000 | 0.00 | 0.00 | 44.85 | 3.02 |
925 | 936 | 2.765807 | CCTCCTCGGCCCATCACT | 60.766 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
928 | 939 | 1.306141 | TCCTCGGCCCATCACTCTT | 60.306 | 57.895 | 0.00 | 0.00 | 0.00 | 2.85 |
930 | 941 | 0.745845 | CCTCGGCCCATCACTCTTTG | 60.746 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
931 | 942 | 0.745845 | CTCGGCCCATCACTCTTTGG | 60.746 | 60.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1025 | 1042 | 0.849417 | AGCTGATCCCTTCCCCAATC | 59.151 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1052 | 1069 | 2.210116 | GCTCGAAAAATGGCGGAGATA | 58.790 | 47.619 | 0.00 | 0.00 | 0.00 | 1.98 |
1263 | 4280 | 3.181439 | CCTCCCCAAATCTCCATAGTTCC | 60.181 | 52.174 | 0.00 | 0.00 | 0.00 | 3.62 |
1298 | 4328 | 6.178324 | TCTCTTCTCTTCGTGTAACCATCTA | 58.822 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1425 | 4455 | 2.456840 | CCTCCCTCCTTCCCCTGT | 59.543 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
1547 | 4577 | 0.179124 | GCGTCTTCTACTGCTGGGAG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1729 | 4765 | 3.947834 | GGATGGGATGAAGGTTTACACTG | 59.052 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
1842 | 4881 | 2.297597 | CGAGGCTCTGTCCCTTATTAGG | 59.702 | 54.545 | 13.50 | 0.00 | 41.60 | 2.69 |
2092 | 5132 | 6.912082 | TGTCCTGTGATGTGATAAATTGTTG | 58.088 | 36.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2095 | 5135 | 7.538678 | GTCCTGTGATGTGATAAATTGTTGAAC | 59.461 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
2114 | 5154 | 9.037737 | TGTTGAACTAAAGTACAATCACAGTAC | 57.962 | 33.333 | 0.00 | 0.00 | 41.59 | 2.73 |
2227 | 5268 | 4.476113 | TGTAGTTAGCTAGTACTCCCTCCA | 59.524 | 45.833 | 0.00 | 0.00 | 34.35 | 3.86 |
2268 | 5309 | 8.550376 | TCGTGGTTTTAGTTCAAATTAGTACAC | 58.450 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2282 | 5323 | 8.765219 | CAAATTAGTACACGCTATTATTGCTCT | 58.235 | 33.333 | 0.00 | 0.00 | 0.00 | 4.09 |
2306 | 5347 | 9.609346 | TCTTGCTGTTAGAAACTTTACTTTACT | 57.391 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
2345 | 5386 | 4.837860 | TGCAGGGAGTTCAAAAATATTGGT | 59.162 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
2399 | 5440 | 2.030946 | GCGACCAGTTGCTGATATCAAC | 59.969 | 50.000 | 6.90 | 2.74 | 42.92 | 3.18 |
2652 | 5703 | 3.515630 | TCTAGTCTTGCTCATTGCTTCG | 58.484 | 45.455 | 0.00 | 0.00 | 43.37 | 3.79 |
2830 | 5882 | 9.042008 | GTGTATGTTTATTTAGATCACATCCGT | 57.958 | 33.333 | 0.00 | 0.00 | 30.70 | 4.69 |
2875 | 5927 | 1.965643 | ACTTTGCAAGGCATGTCATGT | 59.034 | 42.857 | 14.26 | 0.00 | 38.76 | 3.21 |
2877 | 5929 | 3.573538 | ACTTTGCAAGGCATGTCATGTTA | 59.426 | 39.130 | 14.26 | 0.00 | 38.76 | 2.41 |
2878 | 5930 | 4.221262 | ACTTTGCAAGGCATGTCATGTTAT | 59.779 | 37.500 | 14.26 | 0.00 | 38.76 | 1.89 |
2879 | 5931 | 3.786516 | TGCAAGGCATGTCATGTTATG | 57.213 | 42.857 | 14.26 | 10.95 | 31.71 | 1.90 |
2991 | 6046 | 3.005155 | ACTTTTCATCTGCCAAACTGCTC | 59.995 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
3147 | 6202 | 4.753610 | CCAAGCATACACAGACATAGGATG | 59.246 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
3650 | 7355 | 6.037172 | GTCTAAAACCGAACTATCATGCACAT | 59.963 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
3698 | 7403 | 3.637769 | AGTTAGTGAAAAGGGGTTTGCA | 58.362 | 40.909 | 0.00 | 0.00 | 0.00 | 4.08 |
3776 | 7481 | 6.922957 | ACATTTTGTTATGACAGCACGATTTT | 59.077 | 30.769 | 0.00 | 0.00 | 37.04 | 1.82 |
3905 | 7610 | 5.335113 | CCAAATCATCGGCATTGTAGTATGG | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4053 | 7758 | 0.307760 | GTTCAAGGTCACAGCCGTTG | 59.692 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
4077 | 7783 | 5.815740 | GTGAGTTCAGACACTTAGTTTTGGA | 59.184 | 40.000 | 0.00 | 0.00 | 34.65 | 3.53 |
4080 | 7786 | 7.656137 | TGAGTTCAGACACTTAGTTTTGGATAC | 59.344 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
4134 | 7843 | 5.570234 | ACAGGAGTTATCTTCGAAGACTC | 57.430 | 43.478 | 29.24 | 27.30 | 37.98 | 3.36 |
4135 | 7844 | 5.258051 | ACAGGAGTTATCTTCGAAGACTCT | 58.742 | 41.667 | 29.59 | 25.38 | 37.98 | 3.24 |
4136 | 7845 | 5.712917 | ACAGGAGTTATCTTCGAAGACTCTT | 59.287 | 40.000 | 29.59 | 24.45 | 37.98 | 2.85 |
4418 | 8218 | 3.196469 | CCTCTACCACTCTTGCTGAATGA | 59.804 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
4442 | 8246 | 7.654923 | TGAATAGTTCATGATCATCTGTAGCAC | 59.345 | 37.037 | 4.86 | 0.00 | 34.08 | 4.40 |
4449 | 8254 | 6.322201 | TCATGATCATCTGTAGCACTACTTCA | 59.678 | 38.462 | 4.86 | 3.95 | 37.00 | 3.02 |
4452 | 8257 | 7.559486 | TGATCATCTGTAGCACTACTTCATTT | 58.441 | 34.615 | 9.12 | 0.00 | 37.00 | 2.32 |
4453 | 8258 | 8.695456 | TGATCATCTGTAGCACTACTTCATTTA | 58.305 | 33.333 | 9.12 | 0.00 | 37.00 | 1.40 |
4474 | 8283 | 9.139174 | CATTTATTTTCCGCTACTGTTTTTGAT | 57.861 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
4505 | 8314 | 5.814764 | AGCAGCAGAATATTCAGACAAAG | 57.185 | 39.130 | 17.56 | 2.33 | 0.00 | 2.77 |
4544 | 8360 | 2.283298 | CCTGAACATTCATGGAGTCCG | 58.717 | 52.381 | 4.30 | 0.00 | 36.46 | 4.79 |
4620 | 8500 | 7.074653 | AGTTCATAGTGAGGTCAGGTTTTTA | 57.925 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
4621 | 8501 | 7.690256 | AGTTCATAGTGAGGTCAGGTTTTTAT | 58.310 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
4756 | 8640 | 6.365789 | GCACACATTTTATTGCACATGTTACT | 59.634 | 34.615 | 0.00 | 0.00 | 34.97 | 2.24 |
4762 | 8646 | 5.895636 | TTATTGCACATGTTACTTGGAGG | 57.104 | 39.130 | 0.00 | 0.00 | 0.00 | 4.30 |
4763 | 8647 | 2.198827 | TGCACATGTTACTTGGAGGG | 57.801 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4764 | 8648 | 1.702401 | TGCACATGTTACTTGGAGGGA | 59.298 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
4765 | 8649 | 2.084546 | GCACATGTTACTTGGAGGGAC | 58.915 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
4766 | 8650 | 2.552155 | GCACATGTTACTTGGAGGGACA | 60.552 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4767 | 8651 | 3.338249 | CACATGTTACTTGGAGGGACAG | 58.662 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4899 | 8786 | 3.768632 | GTGGAGCACTACTTCGCG | 58.231 | 61.111 | 0.00 | 0.00 | 0.00 | 5.87 |
4922 | 8809 | 6.700081 | GCGATTTACATGGTCAGTATTCACTA | 59.300 | 38.462 | 0.00 | 0.00 | 32.21 | 2.74 |
4954 | 8841 | 8.747538 | AGTCCTCACTTTAAGTTTACAATTGT | 57.252 | 30.769 | 16.68 | 16.68 | 0.00 | 2.71 |
4955 | 8842 | 8.621286 | AGTCCTCACTTTAAGTTTACAATTGTG | 58.379 | 33.333 | 21.42 | 3.37 | 0.00 | 3.33 |
4961 | 8848 | 9.581099 | CACTTTAAGTTTACAATTGTGAGGTTT | 57.419 | 29.630 | 21.42 | 10.88 | 0.00 | 3.27 |
4963 | 8850 | 8.934507 | TTTAAGTTTACAATTGTGAGGTTTGG | 57.065 | 30.769 | 21.42 | 0.00 | 0.00 | 3.28 |
4964 | 8851 | 6.538945 | AAGTTTACAATTGTGAGGTTTGGT | 57.461 | 33.333 | 21.42 | 0.00 | 0.00 | 3.67 |
4965 | 8855 | 7.648039 | AAGTTTACAATTGTGAGGTTTGGTA | 57.352 | 32.000 | 21.42 | 0.00 | 0.00 | 3.25 |
4966 | 8856 | 7.034685 | AGTTTACAATTGTGAGGTTTGGTAC | 57.965 | 36.000 | 21.42 | 5.50 | 0.00 | 3.34 |
4969 | 8859 | 7.648039 | TTACAATTGTGAGGTTTGGTACTTT | 57.352 | 32.000 | 21.42 | 0.00 | 0.00 | 2.66 |
4970 | 8860 | 6.144078 | ACAATTGTGAGGTTTGGTACTTTC | 57.856 | 37.500 | 11.07 | 0.00 | 0.00 | 2.62 |
4985 | 8875 | 8.472007 | TTGGTACTTTCAATTGTTTGTCCTAT | 57.528 | 30.769 | 5.13 | 0.00 | 34.32 | 2.57 |
4987 | 8877 | 9.575868 | TGGTACTTTCAATTGTTTGTCCTATAA | 57.424 | 29.630 | 5.13 | 0.00 | 34.32 | 0.98 |
5020 | 8910 | 5.564550 | AGAAAACTAAGTCAGCATCATGGT | 58.435 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
5026 | 8916 | 6.109359 | ACTAAGTCAGCATCATGGTACTTTC | 58.891 | 40.000 | 13.41 | 0.00 | 30.52 | 2.62 |
5027 | 8917 | 3.525537 | AGTCAGCATCATGGTACTTTCG | 58.474 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
5028 | 8918 | 3.195610 | AGTCAGCATCATGGTACTTTCGA | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
5034 | 8924 | 5.237996 | AGCATCATGGTACTTTCGAATCATG | 59.762 | 40.000 | 0.00 | 8.74 | 34.89 | 3.07 |
5052 | 8942 | 2.163818 | TGTGTCTTCAACCGTGGATC | 57.836 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5086 | 8982 | 2.428888 | TAGCATCATAGTCAGCAGCG | 57.571 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
5087 | 8983 | 0.749049 | AGCATCATAGTCAGCAGCGA | 59.251 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
5088 | 8984 | 0.857935 | GCATCATAGTCAGCAGCGAC | 59.142 | 55.000 | 8.75 | 8.75 | 36.08 | 5.19 |
5089 | 8985 | 1.126890 | CATCATAGTCAGCAGCGACG | 58.873 | 55.000 | 10.45 | 0.00 | 40.98 | 5.12 |
5090 | 8986 | 0.031314 | ATCATAGTCAGCAGCGACGG | 59.969 | 55.000 | 10.45 | 6.24 | 40.98 | 4.79 |
5091 | 8987 | 2.105128 | ATAGTCAGCAGCGACGGC | 59.895 | 61.111 | 10.45 | 0.00 | 40.98 | 5.68 |
5092 | 8988 | 3.758088 | ATAGTCAGCAGCGACGGCG | 62.758 | 63.158 | 6.12 | 6.12 | 46.35 | 6.46 |
5126 | 9023 | 5.065218 | CCCTCTTATGTGAGTTGTGTAATGC | 59.935 | 44.000 | 0.00 | 0.00 | 32.50 | 3.56 |
5147 | 9044 | 1.993369 | GCATGAAAGCCCTACACGCC | 61.993 | 60.000 | 0.00 | 0.00 | 0.00 | 5.68 |
5149 | 9046 | 0.392998 | ATGAAAGCCCTACACGCCAG | 60.393 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
5154 | 9051 | 1.449070 | GCCCTACACGCCAGTAACC | 60.449 | 63.158 | 0.00 | 0.00 | 0.00 | 2.85 |
5156 | 9053 | 1.262640 | CCCTACACGCCAGTAACCCT | 61.263 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
5161 | 9058 | 0.744414 | CACGCCAGTAACCCTCATGG | 60.744 | 60.000 | 0.00 | 0.00 | 41.37 | 3.66 |
5191 | 9130 | 2.019984 | CCTTCCATGCTAGGACTTTGC | 58.980 | 52.381 | 5.62 | 0.00 | 37.42 | 3.68 |
5199 | 9138 | 2.302733 | TGCTAGGACTTTGCATCACTCA | 59.697 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
5214 | 9153 | 3.501950 | TCACTCATTCTGTCATTCGACG | 58.498 | 45.455 | 0.00 | 0.00 | 45.80 | 5.12 |
5216 | 9155 | 1.590238 | CTCATTCTGTCATTCGACGGC | 59.410 | 52.381 | 0.00 | 0.00 | 46.51 | 5.68 |
5235 | 9174 | 1.671328 | GCTCCGCCTTAGGAAAATGTC | 59.329 | 52.381 | 0.69 | 0.00 | 40.25 | 3.06 |
5238 | 9177 | 4.372656 | CTCCGCCTTAGGAAAATGTCTAG | 58.627 | 47.826 | 0.69 | 0.00 | 40.25 | 2.43 |
5265 | 9210 | 3.444916 | ACGCAGTTGATCTAACCATACG | 58.555 | 45.455 | 0.00 | 2.24 | 37.78 | 3.06 |
5283 | 9228 | 2.787723 | CGTGGAGCGTTATTGAAGTG | 57.212 | 50.000 | 0.00 | 0.00 | 35.54 | 3.16 |
5299 | 9257 | 0.607489 | AGTGCAAGCTGCCCTGTAAG | 60.607 | 55.000 | 0.00 | 0.00 | 44.23 | 2.34 |
5427 | 9385 | 1.668419 | CCAAATACTCGGCCTTCCTG | 58.332 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5463 | 9424 | 0.382515 | CGACGACTTCCTCCTGATCC | 59.617 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5464 | 9425 | 1.475403 | GACGACTTCCTCCTGATCCA | 58.525 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5465 | 9426 | 2.035632 | GACGACTTCCTCCTGATCCAT | 58.964 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
5466 | 9427 | 2.035321 | GACGACTTCCTCCTGATCCATC | 59.965 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
5467 | 9428 | 1.342819 | CGACTTCCTCCTGATCCATCC | 59.657 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
5479 | 9440 | 3.261962 | TGATCCATCCATCCATCCATCA | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
5521 | 9482 | 3.446570 | AGGCTGCAAAGCATCGCC | 61.447 | 61.111 | 12.70 | 12.70 | 46.06 | 5.54 |
5623 | 9585 | 2.691996 | TGGCATCCTAGGCAGGCA | 60.692 | 61.111 | 20.56 | 20.56 | 42.30 | 4.75 |
5624 | 9586 | 2.112718 | GGCATCCTAGGCAGGCAG | 59.887 | 66.667 | 17.98 | 1.08 | 42.30 | 4.85 |
5625 | 9587 | 2.446848 | GGCATCCTAGGCAGGCAGA | 61.447 | 63.158 | 17.98 | 0.00 | 42.30 | 4.26 |
5626 | 9588 | 1.227793 | GCATCCTAGGCAGGCAGAC | 60.228 | 63.158 | 2.96 | 0.00 | 42.30 | 3.51 |
5627 | 9589 | 1.068753 | CATCCTAGGCAGGCAGACG | 59.931 | 63.158 | 2.96 | 0.00 | 42.30 | 4.18 |
5628 | 9590 | 1.075970 | ATCCTAGGCAGGCAGACGA | 60.076 | 57.895 | 2.96 | 0.00 | 42.30 | 4.20 |
5630 | 9592 | 2.055042 | CCTAGGCAGGCAGACGAGT | 61.055 | 63.158 | 0.00 | 0.00 | 34.35 | 4.18 |
5631 | 9593 | 0.752009 | CCTAGGCAGGCAGACGAGTA | 60.752 | 60.000 | 0.00 | 0.00 | 34.35 | 2.59 |
5636 | 9598 | 2.042843 | AGGCAGACGAGTAGGGGG | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
5722 | 9725 | 6.431198 | TTTGTTCGTAAAAGAAGACTTGCT | 57.569 | 33.333 | 0.00 | 0.00 | 36.39 | 3.91 |
5723 | 9726 | 6.431198 | TTGTTCGTAAAAGAAGACTTGCTT | 57.569 | 33.333 | 0.00 | 0.00 | 40.25 | 3.91 |
5724 | 9727 | 5.806286 | TGTTCGTAAAAGAAGACTTGCTTG | 58.194 | 37.500 | 0.00 | 0.00 | 36.83 | 4.01 |
5725 | 9728 | 4.468095 | TCGTAAAAGAAGACTTGCTTGC | 57.532 | 40.909 | 0.00 | 0.00 | 36.83 | 4.01 |
5734 | 9737 | 0.036022 | GACTTGCTTGCCCTCTCACT | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5764 | 9767 | 3.546724 | TCCGTGTCAATTTCCAAGTTCA | 58.453 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
5767 | 9770 | 3.066064 | CGTGTCAATTTCCAAGTTCACCA | 59.934 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
5770 | 9784 | 5.691754 | GTGTCAATTTCCAAGTTCACCATTC | 59.308 | 40.000 | 0.00 | 0.00 | 0.00 | 2.67 |
5795 | 9812 | 4.782019 | TCCCTTTTGGTTGAATCAATCG | 57.218 | 40.909 | 0.00 | 0.00 | 38.10 | 3.34 |
5860 | 9883 | 1.356938 | GCGTCTTCGTTAGGGGAAAG | 58.643 | 55.000 | 0.00 | 0.00 | 39.49 | 2.62 |
5884 | 9909 | 2.275380 | GGAAAATGGCACTGGGCGT | 61.275 | 57.895 | 0.00 | 0.00 | 46.16 | 5.68 |
5920 | 9953 | 2.743126 | TGAAAGGGCCGTTACGTATTTG | 59.257 | 45.455 | 11.83 | 0.00 | 0.00 | 2.32 |
5921 | 9954 | 1.089112 | AAGGGCCGTTACGTATTTGC | 58.911 | 50.000 | 9.42 | 0.00 | 0.00 | 3.68 |
5923 | 9956 | 1.083242 | GGGCCGTTACGTATTTGCGA | 61.083 | 55.000 | 3.52 | 0.00 | 35.59 | 5.10 |
5924 | 9957 | 0.720590 | GGCCGTTACGTATTTGCGAA | 59.279 | 50.000 | 3.52 | 0.00 | 35.59 | 4.70 |
5925 | 9958 | 1.267186 | GGCCGTTACGTATTTGCGAAG | 60.267 | 52.381 | 3.52 | 0.00 | 35.59 | 3.79 |
5926 | 9959 | 1.267186 | GCCGTTACGTATTTGCGAAGG | 60.267 | 52.381 | 3.52 | 0.00 | 35.59 | 3.46 |
5927 | 9960 | 1.267186 | CCGTTACGTATTTGCGAAGGC | 60.267 | 52.381 | 3.52 | 0.00 | 40.52 | 4.35 |
5928 | 9961 | 1.657094 | CGTTACGTATTTGCGAAGGCT | 59.343 | 47.619 | 0.00 | 0.00 | 40.82 | 4.58 |
5929 | 9962 | 2.284855 | CGTTACGTATTTGCGAAGGCTC | 60.285 | 50.000 | 0.00 | 0.00 | 40.82 | 4.70 |
5930 | 9963 | 1.930567 | TACGTATTTGCGAAGGCTCC | 58.069 | 50.000 | 0.00 | 0.00 | 40.82 | 4.70 |
5931 | 9964 | 1.082117 | ACGTATTTGCGAAGGCTCCG | 61.082 | 55.000 | 0.00 | 0.00 | 40.82 | 4.63 |
5934 | 9988 | 0.810031 | TATTTGCGAAGGCTCCGAGC | 60.810 | 55.000 | 12.27 | 12.27 | 41.46 | 5.03 |
5952 | 10006 | 2.203422 | CCCCAACCAACCGCAAGA | 60.203 | 61.111 | 0.00 | 0.00 | 43.02 | 3.02 |
5953 | 10007 | 1.830408 | CCCCAACCAACCGCAAGAA | 60.830 | 57.895 | 0.00 | 0.00 | 43.02 | 2.52 |
5954 | 10008 | 1.659794 | CCCAACCAACCGCAAGAAG | 59.340 | 57.895 | 0.00 | 0.00 | 43.02 | 2.85 |
6039 | 10098 | 1.527611 | AGTGACAGACGGACGGACA | 60.528 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
6056 | 10115 | 4.636435 | AGGCAAACGACCCACCCG | 62.636 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
6075 | 10150 | 1.939769 | GAGACTCGAGTCCACAGGCC | 61.940 | 65.000 | 35.83 | 14.40 | 45.85 | 5.19 |
6076 | 10151 | 2.203640 | ACTCGAGTCCACAGGCCA | 60.204 | 61.111 | 13.58 | 0.00 | 0.00 | 5.36 |
6077 | 10152 | 2.262915 | CTCGAGTCCACAGGCCAC | 59.737 | 66.667 | 5.01 | 0.00 | 0.00 | 5.01 |
6078 | 10153 | 3.633094 | CTCGAGTCCACAGGCCACG | 62.633 | 68.421 | 5.01 | 0.00 | 0.00 | 4.94 |
6079 | 10154 | 3.680786 | CGAGTCCACAGGCCACGA | 61.681 | 66.667 | 5.01 | 0.00 | 0.00 | 4.35 |
6080 | 10155 | 2.048127 | GAGTCCACAGGCCACGAC | 60.048 | 66.667 | 5.01 | 4.34 | 0.00 | 4.34 |
6081 | 10156 | 3.916392 | GAGTCCACAGGCCACGACG | 62.916 | 68.421 | 5.01 | 0.00 | 0.00 | 5.12 |
6082 | 10157 | 3.986006 | GTCCACAGGCCACGACGA | 61.986 | 66.667 | 5.01 | 0.00 | 0.00 | 4.20 |
6083 | 10158 | 3.228017 | TCCACAGGCCACGACGAA | 61.228 | 61.111 | 5.01 | 0.00 | 0.00 | 3.85 |
6084 | 10159 | 3.041940 | CCACAGGCCACGACGAAC | 61.042 | 66.667 | 5.01 | 0.00 | 0.00 | 3.95 |
6085 | 10160 | 3.041940 | CACAGGCCACGACGAACC | 61.042 | 66.667 | 5.01 | 0.00 | 0.00 | 3.62 |
6086 | 10161 | 4.657824 | ACAGGCCACGACGAACCG | 62.658 | 66.667 | 5.01 | 0.00 | 0.00 | 4.44 |
6130 | 10205 | 0.720027 | GCTTTACTTTCGACGCTCCC | 59.280 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6131 | 10206 | 1.672145 | GCTTTACTTTCGACGCTCCCT | 60.672 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
6143 | 10218 | 3.368501 | CTCCCTCCTCCCCTCCCA | 61.369 | 72.222 | 0.00 | 0.00 | 0.00 | 4.37 |
6163 | 10238 | 3.764466 | CGCCTTCCTCCTCTGCGT | 61.764 | 66.667 | 0.00 | 0.00 | 40.33 | 5.24 |
6166 | 10241 | 1.153745 | CCTTCCTCCTCTGCGTTCG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
6167 | 10242 | 1.587054 | CTTCCTCCTCTGCGTTCGT | 59.413 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
6206 | 10290 | 1.681264 | CAAAACGGCAAAACCTCTCCT | 59.319 | 47.619 | 0.00 | 0.00 | 35.61 | 3.69 |
6209 | 10293 | 0.035458 | ACGGCAAAACCTCTCCTCTG | 59.965 | 55.000 | 0.00 | 0.00 | 35.61 | 3.35 |
6211 | 10295 | 0.962855 | GGCAAAACCTCTCCTCTGCC | 60.963 | 60.000 | 0.00 | 0.00 | 42.28 | 4.85 |
6212 | 10296 | 0.250901 | GCAAAACCTCTCCTCTGCCA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
6213 | 10297 | 1.819305 | GCAAAACCTCTCCTCTGCCAA | 60.819 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
6214 | 10298 | 2.157738 | CAAAACCTCTCCTCTGCCAAG | 58.842 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
6216 | 10300 | 1.846712 | AACCTCTCCTCTGCCAAGCC | 61.847 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
6217 | 10301 | 1.994507 | CCTCTCCTCTGCCAAGCCT | 60.995 | 63.158 | 0.00 | 0.00 | 0.00 | 4.58 |
6218 | 10302 | 1.521616 | CTCTCCTCTGCCAAGCCTC | 59.478 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
6219 | 10303 | 1.970352 | CTCTCCTCTGCCAAGCCTCC | 61.970 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6220 | 10304 | 2.203983 | TCCTCTGCCAAGCCTCCA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
6221 | 10305 | 1.845627 | CTCCTCTGCCAAGCCTCCAA | 61.846 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6224 | 10323 | 0.815734 | CTCTGCCAAGCCTCCAAATG | 59.184 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
6226 | 10325 | 2.182537 | GCCAAGCCTCCAAATGCG | 59.817 | 61.111 | 0.00 | 0.00 | 0.00 | 4.73 |
6255 | 10354 | 0.103208 | CTAGCATCGAGGCGGAAACT | 59.897 | 55.000 | 17.28 | 0.00 | 39.27 | 2.66 |
6561 | 10669 | 4.736896 | GACGACCACGCCCAGTCC | 62.737 | 72.222 | 0.00 | 0.00 | 43.96 | 3.85 |
6684 | 10807 | 4.796231 | CAGTTCGAGTCCCGGGCG | 62.796 | 72.222 | 18.49 | 14.88 | 39.14 | 6.13 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 1.306141 | CCTGGGTGCTGGAGTAGGA | 60.306 | 63.158 | 0.00 | 0.00 | 0.00 | 2.94 |
26 | 27 | 4.335647 | CCAAGCGACCTGGGTGCT | 62.336 | 66.667 | 8.88 | 8.88 | 41.60 | 4.40 |
30 | 31 | 4.785453 | GGAGCCAAGCGACCTGGG | 62.785 | 72.222 | 0.00 | 0.00 | 35.02 | 4.45 |
71 | 72 | 2.792290 | CTGACGAGGATGCGCAACG | 61.792 | 63.158 | 17.11 | 19.80 | 33.86 | 4.10 |
153 | 161 | 2.819117 | TAGGAACGTGCAGCTGAGCG | 62.819 | 60.000 | 20.43 | 21.85 | 37.31 | 5.03 |
168 | 176 | 1.987855 | CTTGCCTCCGGGTGTAGGA | 60.988 | 63.158 | 11.04 | 0.00 | 34.58 | 2.94 |
191 | 199 | 1.064240 | TCGCCATGGACTAGACCACTA | 60.064 | 52.381 | 18.40 | 0.00 | 43.03 | 2.74 |
208 | 216 | 1.066573 | AGGATATAGTGGCAGCATCGC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 4.58 |
209 | 217 | 2.232208 | TGAGGATATAGTGGCAGCATCG | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 3.84 |
210 | 218 | 3.969287 | TGAGGATATAGTGGCAGCATC | 57.031 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
211 | 219 | 3.199508 | GGATGAGGATATAGTGGCAGCAT | 59.800 | 47.826 | 0.00 | 0.00 | 0.00 | 3.79 |
212 | 220 | 2.568956 | GGATGAGGATATAGTGGCAGCA | 59.431 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
213 | 221 | 2.836981 | AGGATGAGGATATAGTGGCAGC | 59.163 | 50.000 | 0.00 | 0.00 | 0.00 | 5.25 |
214 | 222 | 4.285517 | ACAAGGATGAGGATATAGTGGCAG | 59.714 | 45.833 | 0.00 | 0.00 | 0.00 | 4.85 |
215 | 223 | 4.234550 | ACAAGGATGAGGATATAGTGGCA | 58.765 | 43.478 | 0.00 | 0.00 | 0.00 | 4.92 |
216 | 224 | 4.899352 | ACAAGGATGAGGATATAGTGGC | 57.101 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
219 | 227 | 5.012561 | GGAGCAACAAGGATGAGGATATAGT | 59.987 | 44.000 | 0.00 | 0.00 | 0.00 | 2.12 |
221 | 229 | 5.158141 | AGGAGCAACAAGGATGAGGATATA | 58.842 | 41.667 | 0.00 | 0.00 | 0.00 | 0.86 |
222 | 230 | 3.979347 | AGGAGCAACAAGGATGAGGATAT | 59.021 | 43.478 | 0.00 | 0.00 | 0.00 | 1.63 |
223 | 231 | 3.387962 | AGGAGCAACAAGGATGAGGATA | 58.612 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
224 | 232 | 2.203584 | AGGAGCAACAAGGATGAGGAT | 58.796 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
225 | 233 | 1.661463 | AGGAGCAACAAGGATGAGGA | 58.339 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
226 | 234 | 2.768527 | TCTAGGAGCAACAAGGATGAGG | 59.231 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
227 | 235 | 4.502950 | GGATCTAGGAGCAACAAGGATGAG | 60.503 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
228 | 236 | 3.389329 | GGATCTAGGAGCAACAAGGATGA | 59.611 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
229 | 237 | 3.135348 | TGGATCTAGGAGCAACAAGGATG | 59.865 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
230 | 238 | 3.387962 | TGGATCTAGGAGCAACAAGGAT | 58.612 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
231 | 239 | 2.768527 | CTGGATCTAGGAGCAACAAGGA | 59.231 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
232 | 240 | 2.744494 | GCTGGATCTAGGAGCAACAAGG | 60.744 | 54.545 | 8.31 | 0.00 | 32.70 | 3.61 |
233 | 241 | 2.093288 | TGCTGGATCTAGGAGCAACAAG | 60.093 | 50.000 | 8.31 | 0.00 | 39.75 | 3.16 |
234 | 242 | 1.908619 | TGCTGGATCTAGGAGCAACAA | 59.091 | 47.619 | 8.31 | 0.00 | 39.75 | 2.83 |
235 | 243 | 1.571955 | TGCTGGATCTAGGAGCAACA | 58.428 | 50.000 | 8.31 | 0.00 | 39.75 | 3.33 |
277 | 285 | 2.711922 | GGAGATCGAGCACCACCGT | 61.712 | 63.158 | 12.50 | 0.00 | 0.00 | 4.83 |
305 | 313 | 2.663188 | GCTAATCCTGCGAGGCCG | 60.663 | 66.667 | 0.00 | 0.00 | 34.61 | 6.13 |
583 | 593 | 0.252197 | AGCATCTGACTGCATGCAGA | 59.748 | 50.000 | 45.50 | 28.48 | 46.70 | 4.26 |
675 | 686 | 1.758440 | GATGGCCTAGTGGATGCGGA | 61.758 | 60.000 | 3.32 | 0.00 | 34.57 | 5.54 |
841 | 852 | 3.079578 | CACATTCTGGTGAAGATGCAGT | 58.920 | 45.455 | 0.00 | 0.00 | 41.32 | 4.40 |
846 | 857 | 3.245016 | TGGAAGCACATTCTGGTGAAGAT | 60.245 | 43.478 | 0.00 | 0.00 | 41.32 | 2.40 |
847 | 858 | 2.106338 | TGGAAGCACATTCTGGTGAAGA | 59.894 | 45.455 | 0.00 | 0.00 | 41.32 | 2.87 |
848 | 859 | 2.507484 | TGGAAGCACATTCTGGTGAAG | 58.493 | 47.619 | 0.00 | 0.00 | 41.32 | 3.02 |
849 | 860 | 2.655090 | TGGAAGCACATTCTGGTGAA | 57.345 | 45.000 | 0.00 | 0.00 | 41.32 | 3.18 |
850 | 861 | 2.885135 | ATGGAAGCACATTCTGGTGA | 57.115 | 45.000 | 0.00 | 0.00 | 41.32 | 4.02 |
851 | 862 | 4.885907 | AGAATATGGAAGCACATTCTGGTG | 59.114 | 41.667 | 0.00 | 0.00 | 36.60 | 4.17 |
852 | 863 | 4.885907 | CAGAATATGGAAGCACATTCTGGT | 59.114 | 41.667 | 13.01 | 0.00 | 45.44 | 4.00 |
853 | 864 | 5.434352 | CAGAATATGGAAGCACATTCTGG | 57.566 | 43.478 | 13.01 | 0.00 | 45.44 | 3.86 |
855 | 866 | 5.999044 | AGACAGAATATGGAAGCACATTCT | 58.001 | 37.500 | 0.00 | 0.00 | 38.06 | 2.40 |
856 | 867 | 6.690194 | AAGACAGAATATGGAAGCACATTC | 57.310 | 37.500 | 0.00 | 0.00 | 37.17 | 2.67 |
857 | 868 | 6.660521 | TGAAAGACAGAATATGGAAGCACATT | 59.339 | 34.615 | 0.00 | 0.00 | 32.39 | 2.71 |
858 | 869 | 6.182627 | TGAAAGACAGAATATGGAAGCACAT | 58.817 | 36.000 | 0.00 | 0.00 | 34.90 | 3.21 |
859 | 870 | 5.559770 | TGAAAGACAGAATATGGAAGCACA | 58.440 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
881 | 892 | 5.486735 | AAGAGGGATGCTTCAGATATCTG | 57.513 | 43.478 | 24.32 | 24.32 | 45.08 | 2.90 |
882 | 893 | 5.845614 | AGAAAGAGGGATGCTTCAGATATCT | 59.154 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
883 | 894 | 6.112927 | AGAAAGAGGGATGCTTCAGATATC | 57.887 | 41.667 | 0.00 | 0.00 | 0.00 | 1.63 |
884 | 895 | 5.012975 | GGAGAAAGAGGGATGCTTCAGATAT | 59.987 | 44.000 | 0.00 | 0.00 | 0.00 | 1.63 |
885 | 896 | 4.346418 | GGAGAAAGAGGGATGCTTCAGATA | 59.654 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
886 | 897 | 3.136260 | GGAGAAAGAGGGATGCTTCAGAT | 59.864 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
887 | 898 | 2.503356 | GGAGAAAGAGGGATGCTTCAGA | 59.497 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
888 | 899 | 2.421248 | GGGAGAAAGAGGGATGCTTCAG | 60.421 | 54.545 | 0.00 | 0.00 | 0.00 | 3.02 |
889 | 900 | 1.561542 | GGGAGAAAGAGGGATGCTTCA | 59.438 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
890 | 901 | 1.843206 | AGGGAGAAAGAGGGATGCTTC | 59.157 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
891 | 902 | 1.843206 | GAGGGAGAAAGAGGGATGCTT | 59.157 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
892 | 903 | 1.506025 | GAGGGAGAAAGAGGGATGCT | 58.494 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
893 | 904 | 0.472044 | GGAGGGAGAAAGAGGGATGC | 59.528 | 60.000 | 0.00 | 0.00 | 0.00 | 3.91 |
894 | 905 | 2.046292 | GAGGAGGGAGAAAGAGGGATG | 58.954 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
895 | 906 | 1.412361 | CGAGGAGGGAGAAAGAGGGAT | 60.412 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
896 | 907 | 0.033011 | CGAGGAGGGAGAAAGAGGGA | 60.033 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
897 | 908 | 1.045911 | CCGAGGAGGGAGAAAGAGGG | 61.046 | 65.000 | 0.00 | 0.00 | 35.97 | 4.30 |
898 | 909 | 1.681486 | GCCGAGGAGGGAGAAAGAGG | 61.681 | 65.000 | 0.00 | 0.00 | 41.48 | 3.69 |
899 | 910 | 1.681486 | GGCCGAGGAGGGAGAAAGAG | 61.681 | 65.000 | 0.00 | 0.00 | 41.48 | 2.85 |
900 | 911 | 1.686110 | GGCCGAGGAGGGAGAAAGA | 60.686 | 63.158 | 0.00 | 0.00 | 41.48 | 2.52 |
901 | 912 | 2.736826 | GGGCCGAGGAGGGAGAAAG | 61.737 | 68.421 | 0.00 | 0.00 | 41.48 | 2.62 |
964 | 976 | 0.756442 | GCCTGCTGAAATATGGGCCA | 60.756 | 55.000 | 9.61 | 9.61 | 34.19 | 5.36 |
1025 | 1042 | 3.131478 | ATTTTTCGAGCGGCCGGG | 61.131 | 61.111 | 29.38 | 0.00 | 0.00 | 5.73 |
1212 | 1229 | 0.731994 | GTACCGACGAGGAAGGAGAC | 59.268 | 60.000 | 8.56 | 0.00 | 45.00 | 3.36 |
1286 | 4306 | 6.215495 | AGAGAGAAAGCTAGATGGTTACAC | 57.785 | 41.667 | 0.00 | 0.00 | 35.02 | 2.90 |
1288 | 4308 | 5.361285 | TGGAGAGAGAAAGCTAGATGGTTAC | 59.639 | 44.000 | 0.00 | 0.00 | 35.02 | 2.50 |
1289 | 4309 | 5.519808 | TGGAGAGAGAAAGCTAGATGGTTA | 58.480 | 41.667 | 0.00 | 0.00 | 35.02 | 2.85 |
1290 | 4310 | 4.357325 | TGGAGAGAGAAAGCTAGATGGTT | 58.643 | 43.478 | 0.00 | 0.00 | 38.10 | 3.67 |
1292 | 4312 | 5.185635 | CCTATGGAGAGAGAAAGCTAGATGG | 59.814 | 48.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1298 | 4328 | 3.960102 | CAGTCCTATGGAGAGAGAAAGCT | 59.040 | 47.826 | 0.00 | 0.00 | 29.39 | 3.74 |
1425 | 4455 | 2.915659 | AAGACCGCGTGGAGACCA | 60.916 | 61.111 | 24.59 | 0.00 | 39.21 | 4.02 |
1729 | 4765 | 3.943381 | TCATCATCCTCAGCAATGACAAC | 59.057 | 43.478 | 0.00 | 0.00 | 34.88 | 3.32 |
1842 | 4881 | 8.044060 | TCATGAAATACTTGATGAACACCTTC | 57.956 | 34.615 | 0.00 | 0.00 | 32.95 | 3.46 |
2034 | 5073 | 5.199723 | TCAAACCCATAGCAGAAATGCATA | 58.800 | 37.500 | 0.00 | 0.00 | 37.25 | 3.14 |
2035 | 5074 | 4.025360 | TCAAACCCATAGCAGAAATGCAT | 58.975 | 39.130 | 0.00 | 0.00 | 37.25 | 3.96 |
2055 | 5094 | 8.729756 | CACATCACAGGACAAAGTTATATTTCA | 58.270 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2056 | 5095 | 8.946085 | TCACATCACAGGACAAAGTTATATTTC | 58.054 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2114 | 5154 | 7.361457 | TGTTCCCATACTTCCTCAGTAATAG | 57.639 | 40.000 | 0.00 | 0.00 | 41.56 | 1.73 |
2128 | 5168 | 4.512944 | CAGTGCTGACATATGTTCCCATAC | 59.487 | 45.833 | 10.30 | 6.22 | 36.40 | 2.39 |
2160 | 5200 | 6.412362 | TTCTAATGAGGGAGCTAACAGATC | 57.588 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
2227 | 5268 | 6.834168 | AAACCACGACAAGAATTATGGAAT | 57.166 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2268 | 5309 | 4.542662 | AACAGCAAGAGCAATAATAGCG | 57.457 | 40.909 | 0.00 | 0.00 | 45.49 | 4.26 |
2282 | 5323 | 9.609346 | AGAGTAAAGTAAAGTTTCTAACAGCAA | 57.391 | 29.630 | 0.00 | 0.00 | 0.00 | 3.91 |
2306 | 5347 | 0.991146 | TGCATGTGGGAGGCTTAAGA | 59.009 | 50.000 | 6.67 | 0.00 | 30.62 | 2.10 |
2345 | 5386 | 4.026744 | CCACAGGAGTAAGGATTCTCTCA | 58.973 | 47.826 | 0.00 | 0.00 | 33.09 | 3.27 |
2399 | 5440 | 7.187244 | CAAAATATGCACCTGACTCTCTATG | 57.813 | 40.000 | 0.00 | 0.00 | 0.00 | 2.23 |
2498 | 5549 | 3.326880 | GGTAGAGAACCTGGAAAGGACAA | 59.673 | 47.826 | 0.00 | 0.00 | 45.75 | 3.18 |
2652 | 5703 | 8.807581 | GCATTAACAAGCAGTTATCCAAATAAC | 58.192 | 33.333 | 3.09 | 1.00 | 45.09 | 1.89 |
2752 | 5804 | 6.345298 | TGTAGCTGAAATCGATGTATCCAAA | 58.655 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2991 | 6046 | 7.776107 | AGACAATGGGATCACATATATCTACG | 58.224 | 38.462 | 11.76 | 0.00 | 0.00 | 3.51 |
3199 | 6254 | 5.955961 | TCAGATGACTAATGACCATCCAA | 57.044 | 39.130 | 0.00 | 0.00 | 37.88 | 3.53 |
3278 | 6333 | 1.035932 | CCCCATCTGGAAGCTGCAAG | 61.036 | 60.000 | 1.02 | 0.00 | 37.39 | 4.01 |
3650 | 7355 | 0.330941 | TAGTTGCCACATCCATGCCA | 59.669 | 50.000 | 0.00 | 0.00 | 0.00 | 4.92 |
3717 | 7422 | 8.713271 | GTCATAGTATCCTATTAAACAAGCAGC | 58.287 | 37.037 | 0.00 | 0.00 | 31.29 | 5.25 |
3751 | 7456 | 5.627499 | ATCGTGCTGTCATAACAAAATGT | 57.373 | 34.783 | 0.00 | 0.00 | 34.24 | 2.71 |
3800 | 7505 | 6.525578 | AGTCCGATGTGACTACAGATAAAA | 57.474 | 37.500 | 0.00 | 0.00 | 43.65 | 1.52 |
3905 | 7610 | 6.882610 | TGAATGTGTTCCCTGATATTATGC | 57.117 | 37.500 | 0.00 | 0.00 | 33.26 | 3.14 |
3969 | 7674 | 6.207810 | TCCCACACCAATTACAAAGTAATCAC | 59.792 | 38.462 | 3.16 | 0.00 | 0.00 | 3.06 |
4018 | 7723 | 5.713861 | ACCTTGAACCGTGTAGTTATAGAGT | 59.286 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
4019 | 7724 | 6.127814 | TGACCTTGAACCGTGTAGTTATAGAG | 60.128 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
4020 | 7725 | 5.711506 | TGACCTTGAACCGTGTAGTTATAGA | 59.288 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4021 | 7726 | 5.803967 | GTGACCTTGAACCGTGTAGTTATAG | 59.196 | 44.000 | 0.00 | 0.00 | 0.00 | 1.31 |
4053 | 7758 | 5.815740 | TCCAAAACTAAGTGTCTGAACTCAC | 59.184 | 40.000 | 0.00 | 0.00 | 35.13 | 3.51 |
4055 | 7760 | 7.117956 | GGTATCCAAAACTAAGTGTCTGAACTC | 59.882 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
4077 | 7783 | 5.249393 | AGAGATCAACAGGTTCAACAGGTAT | 59.751 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4080 | 7786 | 4.013267 | AGAGATCAACAGGTTCAACAGG | 57.987 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
4418 | 8218 | 7.733969 | AGTGCTACAGATGATCATGAACTATT | 58.266 | 34.615 | 14.30 | 0.00 | 0.00 | 1.73 |
4427 | 8231 | 6.721704 | ATGAAGTAGTGCTACAGATGATCA | 57.278 | 37.500 | 11.39 | 0.00 | 38.48 | 2.92 |
4442 | 8246 | 8.197988 | ACAGTAGCGGAAAATAAATGAAGTAG | 57.802 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
4449 | 8254 | 9.705290 | AATCAAAAACAGTAGCGGAAAATAAAT | 57.295 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
4452 | 8257 | 8.020819 | CAGAATCAAAAACAGTAGCGGAAAATA | 58.979 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
4453 | 8258 | 6.863126 | CAGAATCAAAAACAGTAGCGGAAAAT | 59.137 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
4474 | 8283 | 4.778213 | ATATTCTGCTGCTTACCCAGAA | 57.222 | 40.909 | 0.00 | 4.97 | 46.10 | 3.02 |
4505 | 8314 | 1.099879 | GGTCATGAGGCATGTGGAGC | 61.100 | 60.000 | 0.00 | 0.00 | 41.98 | 4.70 |
4544 | 8360 | 9.570488 | ACGTGAAGAACTAGAGATAATAACAAC | 57.430 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
4620 | 8500 | 6.861065 | AAACATTACTTGTCAGACGTCAAT | 57.139 | 33.333 | 19.50 | 2.93 | 37.68 | 2.57 |
4621 | 8501 | 6.238266 | GGAAAACATTACTTGTCAGACGTCAA | 60.238 | 38.462 | 19.50 | 1.95 | 37.68 | 3.18 |
4756 | 8640 | 2.637872 | CCTTTACAGTCTGTCCCTCCAA | 59.362 | 50.000 | 9.26 | 0.00 | 0.00 | 3.53 |
4762 | 8646 | 5.830000 | AACAAAACCTTTACAGTCTGTCC | 57.170 | 39.130 | 9.26 | 0.00 | 0.00 | 4.02 |
4763 | 8647 | 7.695201 | GTGTTAACAAAACCTTTACAGTCTGTC | 59.305 | 37.037 | 10.51 | 0.00 | 0.00 | 3.51 |
4764 | 8648 | 7.392393 | AGTGTTAACAAAACCTTTACAGTCTGT | 59.608 | 33.333 | 10.51 | 10.99 | 0.00 | 3.41 |
4765 | 8649 | 7.758495 | AGTGTTAACAAAACCTTTACAGTCTG | 58.242 | 34.615 | 10.51 | 0.00 | 0.00 | 3.51 |
4766 | 8650 | 7.933215 | AGTGTTAACAAAACCTTTACAGTCT | 57.067 | 32.000 | 10.51 | 0.00 | 0.00 | 3.24 |
4767 | 8651 | 9.659830 | CATAGTGTTAACAAAACCTTTACAGTC | 57.340 | 33.333 | 10.51 | 0.00 | 0.00 | 3.51 |
4854 | 8741 | 8.701908 | AAGCATAACTGATTGACATAATGGAT | 57.298 | 30.769 | 0.00 | 0.00 | 27.73 | 3.41 |
4931 | 8818 | 8.740123 | TCACAATTGTAAACTTAAAGTGAGGA | 57.260 | 30.769 | 11.53 | 0.00 | 0.00 | 3.71 |
4940 | 8827 | 7.648039 | ACCAAACCTCACAATTGTAAACTTA | 57.352 | 32.000 | 11.53 | 0.00 | 0.00 | 2.24 |
4954 | 8841 | 6.783708 | AACAATTGAAAGTACCAAACCTCA | 57.216 | 33.333 | 13.59 | 0.00 | 0.00 | 3.86 |
4955 | 8842 | 7.039270 | ACAAACAATTGAAAGTACCAAACCTC | 58.961 | 34.615 | 13.59 | 0.00 | 38.94 | 3.85 |
4961 | 8848 | 9.575868 | TTATAGGACAAACAATTGAAAGTACCA | 57.424 | 29.630 | 13.59 | 0.00 | 38.94 | 3.25 |
4992 | 8882 | 9.897744 | CATGATGCTGACTTAGTTTTCTTTTTA | 57.102 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
4996 | 8886 | 6.006449 | ACCATGATGCTGACTTAGTTTTCTT | 58.994 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4998 | 8888 | 5.886960 | ACCATGATGCTGACTTAGTTTTC | 57.113 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
5002 | 8892 | 5.683876 | AAGTACCATGATGCTGACTTAGT | 57.316 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
5003 | 8893 | 5.233050 | CGAAAGTACCATGATGCTGACTTAG | 59.767 | 44.000 | 0.00 | 1.71 | 0.00 | 2.18 |
5004 | 8894 | 5.105513 | TCGAAAGTACCATGATGCTGACTTA | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5006 | 8896 | 3.195610 | TCGAAAGTACCATGATGCTGACT | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
5007 | 8897 | 3.521560 | TCGAAAGTACCATGATGCTGAC | 58.478 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
5008 | 8898 | 3.885724 | TCGAAAGTACCATGATGCTGA | 57.114 | 42.857 | 0.00 | 0.00 | 0.00 | 4.26 |
5009 | 8899 | 4.571984 | TGATTCGAAAGTACCATGATGCTG | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 4.41 |
5015 | 8905 | 5.582269 | AGACACATGATTCGAAAGTACCATG | 59.418 | 40.000 | 0.00 | 12.76 | 37.69 | 3.66 |
5020 | 8910 | 6.147164 | GGTTGAAGACACATGATTCGAAAGTA | 59.853 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
5026 | 8916 | 2.736721 | ACGGTTGAAGACACATGATTCG | 59.263 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
5027 | 8917 | 3.120199 | CCACGGTTGAAGACACATGATTC | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
5028 | 8918 | 2.813754 | CCACGGTTGAAGACACATGATT | 59.186 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
5034 | 8924 | 2.457366 | AGATCCACGGTTGAAGACAC | 57.543 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5052 | 8942 | 9.561069 | ACTATGATGCTATAACCTTGGTTTAAG | 57.439 | 33.333 | 10.52 | 9.32 | 36.11 | 1.85 |
5086 | 8982 | 3.195698 | GGGATTGCTGTCGCCGTC | 61.196 | 66.667 | 0.00 | 0.00 | 34.43 | 4.79 |
5087 | 8983 | 4.778143 | GGGGATTGCTGTCGCCGT | 62.778 | 66.667 | 8.73 | 0.00 | 40.74 | 5.68 |
5090 | 8986 | 0.178068 | TAAGAGGGGATTGCTGTCGC | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
5091 | 8987 | 2.158900 | ACATAAGAGGGGATTGCTGTCG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
5092 | 8988 | 3.118261 | TCACATAAGAGGGGATTGCTGTC | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
5093 | 8989 | 2.846206 | TCACATAAGAGGGGATTGCTGT | 59.154 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
5102 | 8998 | 5.065218 | GCATTACACAACTCACATAAGAGGG | 59.935 | 44.000 | 0.00 | 0.00 | 39.97 | 4.30 |
5126 | 9023 | 0.729116 | CGTGTAGGGCTTTCATGCAG | 59.271 | 55.000 | 0.00 | 0.00 | 34.04 | 4.41 |
5154 | 9051 | 0.033796 | AGGAACCATGCACCATGAGG | 60.034 | 55.000 | 6.77 | 0.00 | 43.81 | 3.86 |
5156 | 9053 | 1.616725 | GGAAGGAACCATGCACCATGA | 60.617 | 52.381 | 6.77 | 0.00 | 43.81 | 3.07 |
5166 | 9063 | 1.559682 | GTCCTAGCATGGAAGGAACCA | 59.440 | 52.381 | 0.00 | 0.00 | 43.44 | 3.67 |
5167 | 9064 | 1.840635 | AGTCCTAGCATGGAAGGAACC | 59.159 | 52.381 | 0.00 | 0.00 | 43.44 | 3.62 |
5179 | 9115 | 2.977914 | TGAGTGATGCAAAGTCCTAGC | 58.022 | 47.619 | 0.00 | 0.00 | 0.00 | 3.42 |
5191 | 9130 | 4.027050 | CGTCGAATGACAGAATGAGTGATG | 60.027 | 45.833 | 0.00 | 0.00 | 45.80 | 3.07 |
5199 | 9138 | 1.471676 | GGAGCCGTCGAATGACAGAAT | 60.472 | 52.381 | 0.00 | 0.00 | 45.80 | 2.40 |
5216 | 9155 | 3.268023 | AGACATTTTCCTAAGGCGGAG | 57.732 | 47.619 | 0.00 | 0.00 | 33.89 | 4.63 |
5225 | 9164 | 5.730550 | TGCGTTATCACTAGACATTTTCCT | 58.269 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
5231 | 9170 | 5.324784 | TCAACTGCGTTATCACTAGACAT | 57.675 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
5235 | 9174 | 6.418226 | GGTTAGATCAACTGCGTTATCACTAG | 59.582 | 42.308 | 0.00 | 0.00 | 37.30 | 2.57 |
5238 | 9177 | 4.868171 | TGGTTAGATCAACTGCGTTATCAC | 59.132 | 41.667 | 0.00 | 0.00 | 37.30 | 3.06 |
5265 | 9210 | 1.804151 | TGCACTTCAATAACGCTCCAC | 59.196 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
5274 | 9219 | 1.176527 | GGGCAGCTTGCACTTCAATA | 58.823 | 50.000 | 9.78 | 0.00 | 45.01 | 1.90 |
5283 | 9228 | 0.242017 | CAACTTACAGGGCAGCTTGC | 59.758 | 55.000 | 0.00 | 0.00 | 44.08 | 4.01 |
5314 | 9272 | 7.662604 | AGAATGGCTGCAAAAAGATTTAAAG | 57.337 | 32.000 | 0.50 | 0.00 | 0.00 | 1.85 |
5315 | 9273 | 8.344098 | CAAAGAATGGCTGCAAAAAGATTTAAA | 58.656 | 29.630 | 0.50 | 0.00 | 0.00 | 1.52 |
5316 | 9274 | 7.520292 | GCAAAGAATGGCTGCAAAAAGATTTAA | 60.520 | 33.333 | 0.50 | 0.00 | 36.09 | 1.52 |
5421 | 9379 | 1.301293 | GGACTGGGAAGCCAGGAAG | 59.699 | 63.158 | 0.00 | 0.00 | 41.67 | 3.46 |
5427 | 9385 | 2.361737 | GCTTGGGACTGGGAAGCC | 60.362 | 66.667 | 0.00 | 0.00 | 36.84 | 4.35 |
5442 | 9403 | 0.681564 | ATCAGGAGGAAGTCGTCGCT | 60.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
5463 | 9424 | 5.714806 | TGATTGATTGATGGATGGATGGATG | 59.285 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5464 | 9425 | 5.899278 | TGATTGATTGATGGATGGATGGAT | 58.101 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
5465 | 9426 | 5.327737 | TGATTGATTGATGGATGGATGGA | 57.672 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
5466 | 9427 | 6.351033 | GGATTGATTGATTGATGGATGGATGG | 60.351 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
5467 | 9428 | 6.210584 | TGGATTGATTGATTGATGGATGGATG | 59.789 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
5479 | 9440 | 5.240183 | GTCACCGATGATGGATTGATTGATT | 59.760 | 40.000 | 0.00 | 0.00 | 37.14 | 2.57 |
5591 | 9553 | 4.020396 | AGGATGCCACTACAGATCATCATC | 60.020 | 45.833 | 0.00 | 0.00 | 36.25 | 2.92 |
5638 | 9600 | 6.948353 | AGTTATACAGATTTACATGCGCAAG | 58.052 | 36.000 | 17.11 | 14.15 | 43.44 | 4.01 |
5639 | 9601 | 6.918892 | AGTTATACAGATTTACATGCGCAA | 57.081 | 33.333 | 17.11 | 0.00 | 0.00 | 4.85 |
5640 | 9602 | 6.714492 | CAAGTTATACAGATTTACATGCGCA | 58.286 | 36.000 | 14.96 | 14.96 | 0.00 | 6.09 |
5722 | 9725 | 3.576078 | TTTCTTCAAGTGAGAGGGCAA | 57.424 | 42.857 | 0.00 | 0.00 | 0.00 | 4.52 |
5723 | 9726 | 3.560025 | GGATTTCTTCAAGTGAGAGGGCA | 60.560 | 47.826 | 0.00 | 0.00 | 0.00 | 5.36 |
5724 | 9727 | 3.013219 | GGATTTCTTCAAGTGAGAGGGC | 58.987 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
5725 | 9728 | 3.265791 | CGGATTTCTTCAAGTGAGAGGG | 58.734 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5734 | 9737 | 5.300539 | TGGAAATTGACACGGATTTCTTCAA | 59.699 | 36.000 | 9.74 | 0.00 | 40.43 | 2.69 |
5764 | 9767 | 4.719273 | TCAACCAAAAGGGAAAAGAATGGT | 59.281 | 37.500 | 0.00 | 0.00 | 41.23 | 3.55 |
5767 | 9770 | 7.135591 | TGATTCAACCAAAAGGGAAAAGAAT | 57.864 | 32.000 | 0.00 | 0.00 | 41.15 | 2.40 |
5770 | 9784 | 6.146021 | CGATTGATTCAACCAAAAGGGAAAAG | 59.854 | 38.462 | 0.15 | 0.00 | 41.15 | 2.27 |
5795 | 9812 | 2.349912 | GCGCCAGTTTCTTTTCAGAGAC | 60.350 | 50.000 | 0.00 | 0.00 | 34.86 | 3.36 |
5829 | 9849 | 1.701704 | GAAGACGCCTTGCCATTTTG | 58.298 | 50.000 | 0.00 | 0.00 | 31.62 | 2.44 |
5843 | 9863 | 3.690475 | TTCCTTTCCCCTAACGAAGAC | 57.310 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
5860 | 9883 | 2.289631 | CCCAGTGCCATTTTCCTTTTCC | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
5898 | 9923 | 2.014335 | ATACGTAACGGCCCTTTCAC | 57.986 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5927 | 9960 | 3.646715 | TTGGTTGGGGGCTCGGAG | 61.647 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
5928 | 9961 | 3.961414 | GTTGGTTGGGGGCTCGGA | 61.961 | 66.667 | 0.00 | 0.00 | 0.00 | 4.55 |
5934 | 9988 | 3.302344 | CTTGCGGTTGGTTGGGGG | 61.302 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
6030 | 10089 | 3.411351 | CGTTTGCCTGTCCGTCCG | 61.411 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
6031 | 10090 | 2.029964 | TCGTTTGCCTGTCCGTCC | 59.970 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
6039 | 10098 | 4.636435 | CGGGTGGGTCGTTTGCCT | 62.636 | 66.667 | 0.00 | 0.00 | 0.00 | 4.75 |
6056 | 10115 | 1.509004 | GCCTGTGGACTCGAGTCTC | 59.491 | 63.158 | 36.98 | 29.60 | 44.20 | 3.36 |
6085 | 10160 | 1.440353 | CTTTTTCCGAACCGCAGCG | 60.440 | 57.895 | 8.18 | 8.18 | 0.00 | 5.18 |
6086 | 10161 | 1.729484 | GCTTTTTCCGAACCGCAGC | 60.729 | 57.895 | 0.00 | 0.00 | 0.00 | 5.25 |
6087 | 10162 | 1.440353 | CGCTTTTTCCGAACCGCAG | 60.440 | 57.895 | 0.00 | 0.00 | 0.00 | 5.18 |
6130 | 10205 | 2.812619 | GCGAATGGGAGGGGAGGAG | 61.813 | 68.421 | 0.00 | 0.00 | 0.00 | 3.69 |
6131 | 10206 | 2.768344 | GCGAATGGGAGGGGAGGA | 60.768 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
6143 | 10218 | 1.524482 | GCAGAGGAGGAAGGCGAAT | 59.476 | 57.895 | 0.00 | 0.00 | 0.00 | 3.34 |
6163 | 10238 | 4.992511 | CCGGGGGTTTGCGACGAA | 62.993 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
6206 | 10290 | 1.252904 | GCATTTGGAGGCTTGGCAGA | 61.253 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
6209 | 10293 | 1.876497 | TTCGCATTTGGAGGCTTGGC | 61.876 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
6211 | 10295 | 1.917273 | CATTCGCATTTGGAGGCTTG | 58.083 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
6212 | 10296 | 0.174162 | GCATTCGCATTTGGAGGCTT | 59.826 | 50.000 | 0.00 | 0.00 | 38.36 | 4.35 |
6213 | 10297 | 1.811860 | GCATTCGCATTTGGAGGCT | 59.188 | 52.632 | 0.00 | 0.00 | 38.36 | 4.58 |
6214 | 10298 | 1.587088 | CGCATTCGCATTTGGAGGC | 60.587 | 57.895 | 0.00 | 0.00 | 38.40 | 4.70 |
6236 | 10335 | 0.103208 | AGTTTCCGCCTCGATGCTAG | 59.897 | 55.000 | 11.00 | 2.51 | 0.00 | 3.42 |
6241 | 10340 | 2.125106 | GGCAGTTTCCGCCTCGAT | 60.125 | 61.111 | 0.00 | 0.00 | 46.56 | 3.59 |
6556 | 10664 | 4.452733 | GAAGGACGGCGGGGACTG | 62.453 | 72.222 | 13.24 | 0.00 | 38.10 | 3.51 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.