Multiple sequence alignment - TraesCS3B01G446300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G446300 chr3B 100.000 2972 0 0 1 2972 685764569 685761598 0.000000e+00 5489.0
1 TraesCS3B01G446300 chr3B 96.441 1714 59 2 807 2519 685875375 685873663 0.000000e+00 2826.0
2 TraesCS3B01G446300 chr3B 91.466 1160 92 4 961 2120 685910158 685909006 0.000000e+00 1587.0
3 TraesCS3B01G446300 chr3B 87.270 1304 134 12 808 2091 685980270 685978979 0.000000e+00 1459.0
4 TraesCS3B01G446300 chr3B 86.804 1311 136 13 808 2092 685941814 685940515 0.000000e+00 1428.0
5 TraesCS3B01G446300 chr3B 91.784 779 50 9 1 776 685876333 685875566 0.000000e+00 1072.0
6 TraesCS3B01G446300 chr3B 88.386 663 71 5 1857 2519 685698662 685698006 0.000000e+00 793.0
7 TraesCS3B01G446300 chr3B 92.889 450 31 1 2524 2972 685700438 685699989 0.000000e+00 652.0
8 TraesCS3B01G446300 chr3B 91.850 454 34 3 2521 2972 322864792 322865244 5.410000e-177 630.0
9 TraesCS3B01G446300 chr3B 91.832 453 32 3 2521 2972 541684761 541684313 6.990000e-176 627.0
10 TraesCS3B01G446300 chr3B 91.391 453 38 1 2521 2972 167340118 167340570 1.170000e-173 619.0
11 TraesCS3B01G446300 chr3B 84.186 215 25 3 474 686 686045881 686045674 1.810000e-47 200.0
12 TraesCS3B01G446300 chr3B 85.965 57 6 2 175 230 570596730 570596785 3.200000e-05 60.2
13 TraesCS3B01G446300 chr3D 95.329 1520 70 1 1000 2519 520641870 520640352 0.000000e+00 2412.0
14 TraesCS3B01G446300 chr3D 92.500 1160 81 3 961 2120 520678241 520677088 0.000000e+00 1655.0
15 TraesCS3B01G446300 chr3D 87.969 1305 126 13 808 2092 520684333 520683040 0.000000e+00 1511.0
16 TraesCS3B01G446300 chr3D 88.859 1131 117 7 961 2091 520703551 520702430 0.000000e+00 1382.0
17 TraesCS3B01G446300 chr3D 93.179 777 46 6 1 772 520643006 520642232 0.000000e+00 1134.0
18 TraesCS3B01G446300 chr3D 83.784 333 38 8 417 742 520704244 520703921 4.810000e-78 302.0
19 TraesCS3B01G446300 chr3D 98.125 160 2 1 807 965 520642031 520641872 8.110000e-71 278.0
20 TraesCS3B01G446300 chr3D 87.586 145 16 2 819 961 520656991 520656847 1.830000e-37 167.0
21 TraesCS3B01G446300 chr3D 81.538 130 14 3 600 728 520676674 520676554 6.780000e-17 99.0
22 TraesCS3B01G446300 chr3A 95.330 1456 66 2 807 2261 655936810 655935356 0.000000e+00 2311.0
23 TraesCS3B01G446300 chr3A 95.267 1458 68 1 804 2261 658186666 658188122 0.000000e+00 2309.0
24 TraesCS3B01G446300 chr3A 91.207 1160 96 3 961 2120 655994968 655993815 0.000000e+00 1572.0
25 TraesCS3B01G446300 chr3A 92.208 770 49 7 8 772 655937765 655937002 0.000000e+00 1079.0
26 TraesCS3B01G446300 chr3A 91.260 778 52 9 1 772 658185710 658186477 0.000000e+00 1046.0
27 TraesCS3B01G446300 chr3A 94.737 247 13 0 2261 2507 658189163 658189409 4.650000e-103 385.0
28 TraesCS3B01G446300 chr3A 94.332 247 13 1 2261 2507 655934318 655934073 7.780000e-101 377.0
29 TraesCS3B01G446300 chr3A 86.897 145 17 2 819 961 655987460 655987316 8.530000e-36 161.0
30 TraesCS3B01G446300 chr3A 85.455 55 8 0 174 228 450990407 450990461 1.150000e-04 58.4
31 TraesCS3B01G446300 chr7B 92.551 443 32 1 2521 2962 290724917 290724475 4.180000e-178 634.0
32 TraesCS3B01G446300 chr7B 91.630 454 31 4 2521 2972 500257359 500256911 3.250000e-174 621.0
33 TraesCS3B01G446300 chr6B 91.850 454 34 3 2521 2972 319546215 319545763 5.410000e-177 630.0
34 TraesCS3B01G446300 chr2B 91.648 455 37 1 2518 2971 154089739 154090193 1.940000e-176 628.0
35 TraesCS3B01G446300 chr2B 78.529 340 57 13 57 390 568267556 568267885 3.000000e-50 209.0
36 TraesCS3B01G446300 chr4B 91.556 450 37 1 2524 2972 31961024 31960575 1.170000e-173 619.0
37 TraesCS3B01G446300 chr6D 76.825 315 66 7 2 312 33504999 33505310 1.420000e-38 171.0
38 TraesCS3B01G446300 chr1A 80.576 139 27 0 173 311 414910704 414910842 1.130000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G446300 chr3B 685761598 685764569 2971 True 5489.000000 5489 100.000000 1 2972 1 chr3B.!!$R2 2971
1 TraesCS3B01G446300 chr3B 685873663 685876333 2670 True 1949.000000 2826 94.112500 1 2519 2 chr3B.!!$R8 2518
2 TraesCS3B01G446300 chr3B 685909006 685910158 1152 True 1587.000000 1587 91.466000 961 2120 1 chr3B.!!$R3 1159
3 TraesCS3B01G446300 chr3B 685978979 685980270 1291 True 1459.000000 1459 87.270000 808 2091 1 chr3B.!!$R5 1283
4 TraesCS3B01G446300 chr3B 685940515 685941814 1299 True 1428.000000 1428 86.804000 808 2092 1 chr3B.!!$R4 1284
5 TraesCS3B01G446300 chr3B 685698006 685700438 2432 True 722.500000 793 90.637500 1857 2972 2 chr3B.!!$R7 1115
6 TraesCS3B01G446300 chr3D 520683040 520684333 1293 True 1511.000000 1511 87.969000 808 2092 1 chr3D.!!$R2 1284
7 TraesCS3B01G446300 chr3D 520640352 520643006 2654 True 1274.666667 2412 95.544333 1 2519 3 chr3D.!!$R3 2518
8 TraesCS3B01G446300 chr3D 520676554 520678241 1687 True 877.000000 1655 87.019000 600 2120 2 chr3D.!!$R4 1520
9 TraesCS3B01G446300 chr3D 520702430 520704244 1814 True 842.000000 1382 86.321500 417 2091 2 chr3D.!!$R5 1674
10 TraesCS3B01G446300 chr3A 655993815 655994968 1153 True 1572.000000 1572 91.207000 961 2120 1 chr3A.!!$R2 1159
11 TraesCS3B01G446300 chr3A 655934073 655937765 3692 True 1255.666667 2311 93.956667 8 2507 3 chr3A.!!$R3 2499
12 TraesCS3B01G446300 chr3A 658185710 658189409 3699 False 1246.666667 2309 93.754667 1 2507 3 chr3A.!!$F2 2506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
740 751 0.248012 TTAAACTCTGCCCGATCGCA 59.752 50.0 10.32 1.91 37.19 5.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2603 3953 0.031585 TCTCTGTGTCGTTTGTCCCG 59.968 55.0 0.0 0.0 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 96 7.068716 GGACTATTCTGGGTTGATTTGCTATTT 59.931 37.037 0.00 0.00 0.00 1.40
278 282 1.191647 GCACTTCGTGTACAAACCGAG 59.808 52.381 0.00 0.35 35.75 4.63
293 297 1.135731 CGAGCACTCTCTGACGGAC 59.864 63.158 0.00 0.00 37.19 4.79
301 305 2.506231 ACTCTCTGACGGACTATCAGGA 59.494 50.000 2.37 0.00 43.25 3.86
542 553 1.264288 CTTGTTGAAGACTTCCCGTGC 59.736 52.381 12.66 0.00 0.00 5.34
697 708 4.859304 ACTACATACAAAGTCGTCCACA 57.141 40.909 0.00 0.00 0.00 4.17
698 709 5.401531 ACTACATACAAAGTCGTCCACAT 57.598 39.130 0.00 0.00 0.00 3.21
699 710 6.519679 ACTACATACAAAGTCGTCCACATA 57.480 37.500 0.00 0.00 0.00 2.29
700 711 7.108841 ACTACATACAAAGTCGTCCACATAT 57.891 36.000 0.00 0.00 0.00 1.78
701 712 7.201145 ACTACATACAAAGTCGTCCACATATC 58.799 38.462 0.00 0.00 0.00 1.63
703 714 5.810587 ACATACAAAGTCGTCCACATATCAC 59.189 40.000 0.00 0.00 0.00 3.06
707 718 4.471904 AAGTCGTCCACATATCACATGT 57.528 40.909 0.00 0.00 0.00 3.21
710 721 4.081697 AGTCGTCCACATATCACATGTTGA 60.082 41.667 0.00 0.00 39.11 3.18
711 722 4.629634 GTCGTCCACATATCACATGTTGAA 59.370 41.667 0.00 0.00 37.92 2.69
712 723 5.294306 GTCGTCCACATATCACATGTTGAAT 59.706 40.000 0.00 0.00 37.92 2.57
715 726 7.224557 TCGTCCACATATCACATGTTGAATAAG 59.775 37.037 0.00 0.00 37.92 1.73
716 727 7.518848 CGTCCACATATCACATGTTGAATAAGG 60.519 40.741 0.00 0.00 37.92 2.69
718 729 8.052141 TCCACATATCACATGTTGAATAAGGAA 58.948 33.333 0.00 0.00 37.92 3.36
719 730 8.685427 CCACATATCACATGTTGAATAAGGAAA 58.315 33.333 0.00 0.00 37.92 3.13
732 743 9.140286 GTTGAATAAGGAAAATTAAACTCTGCC 57.860 33.333 0.00 0.00 28.72 4.85
733 744 7.836842 TGAATAAGGAAAATTAAACTCTGCCC 58.163 34.615 0.00 0.00 0.00 5.36
734 745 4.783764 AAGGAAAATTAAACTCTGCCCG 57.216 40.909 0.00 0.00 0.00 6.13
735 746 4.028993 AGGAAAATTAAACTCTGCCCGA 57.971 40.909 0.00 0.00 0.00 5.14
740 751 0.248012 TTAAACTCTGCCCGATCGCA 59.752 50.000 10.32 1.91 37.19 5.10
741 752 0.248012 TAAACTCTGCCCGATCGCAA 59.752 50.000 10.32 0.00 38.56 4.85
743 754 0.392998 AACTCTGCCCGATCGCAAAT 60.393 50.000 10.32 0.00 38.56 2.32
744 755 0.811616 ACTCTGCCCGATCGCAAATC 60.812 55.000 10.32 0.00 38.56 2.17
745 756 0.811219 CTCTGCCCGATCGCAAATCA 60.811 55.000 10.32 1.49 38.56 2.57
750 761 2.289631 TGCCCGATCGCAAATCAGATAT 60.290 45.455 10.32 0.00 35.32 1.63
751 762 3.056179 TGCCCGATCGCAAATCAGATATA 60.056 43.478 10.32 0.00 35.32 0.86
756 767 7.517417 GCCCGATCGCAAATCAGATATAATAAG 60.517 40.741 10.32 0.00 0.00 1.73
757 768 7.042456 CCCGATCGCAAATCAGATATAATAAGG 60.042 40.741 10.32 0.00 0.00 2.69
759 770 8.535592 CGATCGCAAATCAGATATAATAAGGTC 58.464 37.037 0.26 0.00 0.00 3.85
761 772 9.950496 ATCGCAAATCAGATATAATAAGGTCTT 57.050 29.630 0.00 0.00 0.00 3.01
789 800 3.459828 TGGAGGGATCCTACATGTTGAA 58.540 45.455 12.58 0.00 39.99 2.69
792 803 5.044179 TGGAGGGATCCTACATGTTGAAAAT 60.044 40.000 12.58 0.00 39.99 1.82
794 805 7.060421 GGAGGGATCCTACATGTTGAAAATAA 58.940 38.462 12.58 0.00 33.84 1.40
797 808 9.320295 AGGGATCCTACATGTTGAAAATAAAAA 57.680 29.630 12.58 0.00 28.47 1.94
834 845 1.062880 GTCAAACACGCTTCCACGAAA 59.937 47.619 0.00 0.00 36.70 3.46
842 853 1.404986 CGCTTCCACGAAATCCTACCA 60.405 52.381 0.00 0.00 34.06 3.25
843 854 2.706890 GCTTCCACGAAATCCTACCAA 58.293 47.619 0.00 0.00 0.00 3.67
844 855 2.678336 GCTTCCACGAAATCCTACCAAG 59.322 50.000 0.00 0.00 0.00 3.61
857 868 5.560722 TCCTACCAAGAAGTTCAACATCA 57.439 39.130 5.50 0.00 0.00 3.07
858 869 5.935945 TCCTACCAAGAAGTTCAACATCAA 58.064 37.500 5.50 0.00 0.00 2.57
869 880 2.674954 TCAACATCAAGCAAAATGGCG 58.325 42.857 0.00 0.00 39.27 5.69
871 882 2.642139 ACATCAAGCAAAATGGCGAG 57.358 45.000 0.00 0.00 39.27 5.03
917 929 1.065491 TGGTTTCCCTCACATCCATCG 60.065 52.381 0.00 0.00 0.00 3.84
1076 1299 4.403976 GCTGGTACTAGCGCTGAC 57.596 61.111 22.90 15.02 33.46 3.51
1534 1757 3.508840 GCGCCAACAATCTCCCGG 61.509 66.667 0.00 0.00 0.00 5.73
1551 1774 1.889530 CGGGCCCTTTCGACTCTCTT 61.890 60.000 22.43 0.00 0.00 2.85
1782 2005 1.612442 CCCTCTCCCTTCGGACCAA 60.612 63.158 0.00 0.00 33.32 3.67
1878 2101 2.880822 TCTTCAAGAATTTCGCAGCG 57.119 45.000 9.06 9.06 0.00 5.18
2016 2239 4.291540 TGTGAACTCATTGTCTTTGTGC 57.708 40.909 0.00 0.00 0.00 4.57
2112 2336 6.538021 TGTTTAGCATGTGATTTTTGCAAACT 59.462 30.769 12.39 4.92 37.74 2.66
2117 2341 8.470040 AGCATGTGATTTTTGCAAACTAATAG 57.530 30.769 12.39 0.00 38.84 1.73
2337 3686 5.402398 CAATTTCAAGATTTTCCGGACTCC 58.598 41.667 1.83 0.00 0.00 3.85
2481 3831 2.822637 CCATGCACCGCCTCCCTAT 61.823 63.158 0.00 0.00 0.00 2.57
2515 3865 2.027561 TGTGTAGTAGTCCACATTGGCC 60.028 50.000 0.00 0.00 37.47 5.36
2516 3866 1.206132 TGTAGTAGTCCACATTGGCCG 59.794 52.381 0.00 0.00 37.47 6.13
2517 3867 0.177141 TAGTAGTCCACATTGGCCGC 59.823 55.000 0.00 0.00 37.47 6.53
2518 3868 1.078426 GTAGTCCACATTGGCCGCT 60.078 57.895 0.00 0.00 37.47 5.52
2519 3869 1.090052 GTAGTCCACATTGGCCGCTC 61.090 60.000 0.00 0.00 37.47 5.03
2520 3870 1.264749 TAGTCCACATTGGCCGCTCT 61.265 55.000 0.00 0.00 37.47 4.09
2521 3871 2.109126 GTCCACATTGGCCGCTCTC 61.109 63.158 0.00 0.00 37.47 3.20
2522 3872 3.197790 CCACATTGGCCGCTCTCG 61.198 66.667 0.00 0.00 0.00 4.04
2523 3873 2.434884 CACATTGGCCGCTCTCGT 60.435 61.111 0.00 0.00 0.00 4.18
2524 3874 2.434884 ACATTGGCCGCTCTCGTG 60.435 61.111 0.00 0.00 0.00 4.35
2525 3875 3.197790 CATTGGCCGCTCTCGTGG 61.198 66.667 0.00 0.00 43.83 4.94
2526 3876 3.390521 ATTGGCCGCTCTCGTGGA 61.391 61.111 0.00 0.00 43.70 4.02
2527 3877 2.735772 ATTGGCCGCTCTCGTGGAT 61.736 57.895 0.00 0.00 43.70 3.41
2528 3878 2.257409 ATTGGCCGCTCTCGTGGATT 62.257 55.000 0.00 0.00 43.70 3.01
2529 3879 2.125106 GGCCGCTCTCGTGGATTT 60.125 61.111 0.00 0.00 43.70 2.17
2530 3880 1.143183 GGCCGCTCTCGTGGATTTA 59.857 57.895 0.00 0.00 43.70 1.40
2531 3881 0.461339 GGCCGCTCTCGTGGATTTAA 60.461 55.000 0.00 0.00 43.70 1.52
2532 3882 0.651031 GCCGCTCTCGTGGATTTAAC 59.349 55.000 0.00 0.00 43.70 2.01
2533 3883 2.004583 CCGCTCTCGTGGATTTAACA 57.995 50.000 0.00 0.00 43.70 2.41
2534 3884 1.927174 CCGCTCTCGTGGATTTAACAG 59.073 52.381 0.00 0.00 43.70 3.16
2535 3885 1.927174 CGCTCTCGTGGATTTAACAGG 59.073 52.381 0.00 0.00 0.00 4.00
2536 3886 2.280628 GCTCTCGTGGATTTAACAGGG 58.719 52.381 0.00 0.00 0.00 4.45
2537 3887 2.280628 CTCTCGTGGATTTAACAGGGC 58.719 52.381 0.00 0.00 0.00 5.19
2538 3888 1.626321 TCTCGTGGATTTAACAGGGCA 59.374 47.619 0.00 0.00 0.00 5.36
2539 3889 2.009774 CTCGTGGATTTAACAGGGCAG 58.990 52.381 0.00 0.00 0.00 4.85
2540 3890 1.626321 TCGTGGATTTAACAGGGCAGA 59.374 47.619 0.00 0.00 0.00 4.26
2541 3891 2.238646 TCGTGGATTTAACAGGGCAGAT 59.761 45.455 0.00 0.00 0.00 2.90
2542 3892 2.355756 CGTGGATTTAACAGGGCAGATG 59.644 50.000 0.00 0.00 0.00 2.90
2543 3893 2.099756 GTGGATTTAACAGGGCAGATGC 59.900 50.000 0.00 0.00 41.14 3.91
2553 3903 4.540153 GCAGATGCCCTAGCGAAA 57.460 55.556 0.00 0.00 44.31 3.46
2554 3904 2.315246 GCAGATGCCCTAGCGAAAG 58.685 57.895 0.00 0.00 44.31 2.62
2555 3905 1.162800 GCAGATGCCCTAGCGAAAGG 61.163 60.000 0.00 0.00 44.31 3.11
2556 3906 0.465705 CAGATGCCCTAGCGAAAGGA 59.534 55.000 5.12 0.00 44.31 3.36
2557 3907 0.466124 AGATGCCCTAGCGAAAGGAC 59.534 55.000 5.12 0.00 44.31 3.85
2558 3908 0.466124 GATGCCCTAGCGAAAGGACT 59.534 55.000 5.12 0.00 44.31 3.85
2559 3909 0.912486 ATGCCCTAGCGAAAGGACTT 59.088 50.000 5.12 0.00 44.31 3.01
2560 3910 1.563924 TGCCCTAGCGAAAGGACTTA 58.436 50.000 5.12 0.00 44.31 2.24
2561 3911 1.480954 TGCCCTAGCGAAAGGACTTAG 59.519 52.381 5.12 0.00 44.31 2.18
2562 3912 1.202545 GCCCTAGCGAAAGGACTTAGG 60.203 57.143 5.12 0.00 39.15 2.69
2563 3913 2.108970 CCCTAGCGAAAGGACTTAGGT 58.891 52.381 5.12 0.00 39.15 3.08
2564 3914 2.159085 CCCTAGCGAAAGGACTTAGGTG 60.159 54.545 5.12 0.00 39.15 4.00
2565 3915 2.496470 CCTAGCGAAAGGACTTAGGTGT 59.504 50.000 0.00 0.00 39.15 4.16
2566 3916 2.457366 AGCGAAAGGACTTAGGTGTG 57.543 50.000 0.00 0.00 0.00 3.82
2567 3917 1.002087 AGCGAAAGGACTTAGGTGTGG 59.998 52.381 0.00 0.00 0.00 4.17
2568 3918 1.001633 GCGAAAGGACTTAGGTGTGGA 59.998 52.381 0.00 0.00 0.00 4.02
2569 3919 2.931320 GCGAAAGGACTTAGGTGTGGAG 60.931 54.545 0.00 0.00 0.00 3.86
2570 3920 2.701107 GAAAGGACTTAGGTGTGGAGC 58.299 52.381 0.00 0.00 0.00 4.70
2571 3921 0.984995 AAGGACTTAGGTGTGGAGCC 59.015 55.000 0.00 0.00 0.00 4.70
2572 3922 0.178903 AGGACTTAGGTGTGGAGCCA 60.179 55.000 0.00 0.00 0.00 4.75
2573 3923 0.912486 GGACTTAGGTGTGGAGCCAT 59.088 55.000 0.00 0.00 0.00 4.40
2574 3924 1.134371 GGACTTAGGTGTGGAGCCATC 60.134 57.143 0.00 0.00 0.00 3.51
2575 3925 0.537188 ACTTAGGTGTGGAGCCATCG 59.463 55.000 0.00 0.00 0.00 3.84
2576 3926 0.537188 CTTAGGTGTGGAGCCATCGT 59.463 55.000 0.00 0.00 0.00 3.73
2577 3927 1.754803 CTTAGGTGTGGAGCCATCGTA 59.245 52.381 0.00 0.00 0.00 3.43
2578 3928 1.399714 TAGGTGTGGAGCCATCGTAG 58.600 55.000 0.00 0.00 0.00 3.51
2579 3929 1.521681 GGTGTGGAGCCATCGTAGC 60.522 63.158 0.00 0.00 0.00 3.58
2580 3930 1.878522 GTGTGGAGCCATCGTAGCG 60.879 63.158 0.00 0.00 34.64 4.26
2581 3931 2.049767 TGTGGAGCCATCGTAGCGA 61.050 57.895 0.00 0.00 41.13 4.93
2582 3932 1.299468 GTGGAGCCATCGTAGCGAG 60.299 63.158 0.00 0.00 39.91 5.03
2583 3933 2.336809 GGAGCCATCGTAGCGAGG 59.663 66.667 0.00 0.00 39.91 4.63
2584 3934 2.491022 GGAGCCATCGTAGCGAGGT 61.491 63.158 2.71 0.00 39.91 3.85
2585 3935 1.437986 GAGCCATCGTAGCGAGGTT 59.562 57.895 2.71 0.49 39.91 3.50
2586 3936 0.666913 GAGCCATCGTAGCGAGGTTA 59.333 55.000 2.71 0.00 39.91 2.85
2587 3937 0.669077 AGCCATCGTAGCGAGGTTAG 59.331 55.000 2.71 0.00 39.91 2.34
2588 3938 0.940047 GCCATCGTAGCGAGGTTAGC 60.940 60.000 2.71 0.00 39.91 3.09
2590 3940 1.067212 CCATCGTAGCGAGGTTAGCTT 59.933 52.381 0.00 0.00 43.24 3.74
2591 3941 2.292569 CCATCGTAGCGAGGTTAGCTTA 59.707 50.000 0.00 0.00 43.24 3.09
2592 3942 3.243301 CCATCGTAGCGAGGTTAGCTTAA 60.243 47.826 0.00 0.00 43.24 1.85
2593 3943 4.357142 CATCGTAGCGAGGTTAGCTTAAA 58.643 43.478 0.00 0.00 43.24 1.52
2594 3944 4.025015 TCGTAGCGAGGTTAGCTTAAAG 57.975 45.455 0.00 0.00 43.24 1.85
2595 3945 3.114065 CGTAGCGAGGTTAGCTTAAAGG 58.886 50.000 0.00 0.00 43.24 3.11
2596 3946 2.693267 AGCGAGGTTAGCTTAAAGGG 57.307 50.000 0.00 0.00 43.24 3.95
2597 3947 1.209747 AGCGAGGTTAGCTTAAAGGGG 59.790 52.381 0.00 0.00 43.24 4.79
2598 3948 1.065636 GCGAGGTTAGCTTAAAGGGGT 60.066 52.381 0.00 0.00 0.00 4.95
2599 3949 2.617276 GCGAGGTTAGCTTAAAGGGGTT 60.617 50.000 0.00 0.00 0.00 4.11
2600 3950 3.369787 GCGAGGTTAGCTTAAAGGGGTTA 60.370 47.826 0.00 0.00 0.00 2.85
2601 3951 4.835678 CGAGGTTAGCTTAAAGGGGTTAA 58.164 43.478 0.00 0.00 0.00 2.01
2607 3957 2.793288 CTTAAAGGGGTTAAGCGGGA 57.207 50.000 0.00 0.00 41.67 5.14
2608 3958 2.362736 CTTAAAGGGGTTAAGCGGGAC 58.637 52.381 0.00 0.00 41.67 4.46
2609 3959 1.360185 TAAAGGGGTTAAGCGGGACA 58.640 50.000 0.00 0.00 0.00 4.02
2610 3960 0.479378 AAAGGGGTTAAGCGGGACAA 59.521 50.000 0.00 0.00 0.00 3.18
2611 3961 0.479378 AAGGGGTTAAGCGGGACAAA 59.521 50.000 0.00 0.00 0.00 2.83
2612 3962 0.251033 AGGGGTTAAGCGGGACAAAC 60.251 55.000 0.00 0.00 0.00 2.93
2613 3963 1.579964 GGGGTTAAGCGGGACAAACG 61.580 60.000 0.00 0.00 0.00 3.60
2614 3964 0.603439 GGGTTAAGCGGGACAAACGA 60.603 55.000 0.00 0.00 0.00 3.85
2615 3965 0.514255 GGTTAAGCGGGACAAACGAC 59.486 55.000 0.00 0.00 0.00 4.34
2616 3966 1.219646 GTTAAGCGGGACAAACGACA 58.780 50.000 0.00 0.00 0.00 4.35
2617 3967 1.070376 GTTAAGCGGGACAAACGACAC 60.070 52.381 0.00 0.00 0.00 3.67
2618 3968 0.104487 TAAGCGGGACAAACGACACA 59.896 50.000 0.00 0.00 0.00 3.72
2619 3969 1.157870 AAGCGGGACAAACGACACAG 61.158 55.000 0.00 0.00 0.00 3.66
2620 3970 1.593209 GCGGGACAAACGACACAGA 60.593 57.895 0.00 0.00 0.00 3.41
2621 3971 1.557443 GCGGGACAAACGACACAGAG 61.557 60.000 0.00 0.00 0.00 3.35
2622 3972 0.031585 CGGGACAAACGACACAGAGA 59.968 55.000 0.00 0.00 0.00 3.10
2623 3973 1.784525 GGGACAAACGACACAGAGAG 58.215 55.000 0.00 0.00 0.00 3.20
2624 3974 1.068741 GGGACAAACGACACAGAGAGT 59.931 52.381 0.00 0.00 0.00 3.24
2625 3975 2.295349 GGGACAAACGACACAGAGAGTA 59.705 50.000 0.00 0.00 0.00 2.59
2626 3976 3.056749 GGGACAAACGACACAGAGAGTAT 60.057 47.826 0.00 0.00 0.00 2.12
2627 3977 4.557205 GGACAAACGACACAGAGAGTATT 58.443 43.478 0.00 0.00 0.00 1.89
2628 3978 4.989168 GGACAAACGACACAGAGAGTATTT 59.011 41.667 0.00 0.00 0.00 1.40
2629 3979 6.154445 GGACAAACGACACAGAGAGTATTTA 58.846 40.000 0.00 0.00 0.00 1.40
2630 3980 6.089150 GGACAAACGACACAGAGAGTATTTAC 59.911 42.308 0.00 0.00 0.00 2.01
2631 3981 5.924825 ACAAACGACACAGAGAGTATTTACC 59.075 40.000 0.00 0.00 0.00 2.85
2632 3982 4.715527 ACGACACAGAGAGTATTTACCC 57.284 45.455 0.00 0.00 0.00 3.69
2633 3983 4.084287 ACGACACAGAGAGTATTTACCCA 58.916 43.478 0.00 0.00 0.00 4.51
2634 3984 4.158025 ACGACACAGAGAGTATTTACCCAG 59.842 45.833 0.00 0.00 0.00 4.45
2635 3985 4.440250 CGACACAGAGAGTATTTACCCAGG 60.440 50.000 0.00 0.00 0.00 4.45
2636 3986 4.426704 ACACAGAGAGTATTTACCCAGGT 58.573 43.478 0.00 0.00 0.00 4.00
2637 3987 4.844655 ACACAGAGAGTATTTACCCAGGTT 59.155 41.667 0.00 0.00 0.00 3.50
2638 3988 5.046520 ACACAGAGAGTATTTACCCAGGTTC 60.047 44.000 0.00 0.00 0.00 3.62
2639 3989 4.159879 ACAGAGAGTATTTACCCAGGTTCG 59.840 45.833 0.00 0.00 0.00 3.95
2640 3990 3.705072 AGAGAGTATTTACCCAGGTTCGG 59.295 47.826 0.00 0.00 0.00 4.30
2641 3991 2.169978 AGAGTATTTACCCAGGTTCGGC 59.830 50.000 0.00 0.00 0.00 5.54
2642 3992 1.211212 AGTATTTACCCAGGTTCGGCC 59.789 52.381 0.00 0.00 37.58 6.13
2643 3993 0.547553 TATTTACCCAGGTTCGGCCC 59.452 55.000 0.00 0.00 38.26 5.80
2644 3994 2.219449 ATTTACCCAGGTTCGGCCCC 62.219 60.000 0.00 0.00 38.26 5.80
2645 3995 3.876255 TTACCCAGGTTCGGCCCCT 62.876 63.158 0.00 0.00 38.26 4.79
2648 3998 3.787001 CCAGGTTCGGCCCCTCTC 61.787 72.222 0.00 0.00 38.26 3.20
2649 3999 3.003173 CAGGTTCGGCCCCTCTCA 61.003 66.667 0.00 0.00 38.26 3.27
2650 4000 2.203938 AGGTTCGGCCCCTCTCAA 60.204 61.111 0.00 0.00 38.26 3.02
2651 4001 1.616628 AGGTTCGGCCCCTCTCAAT 60.617 57.895 0.00 0.00 38.26 2.57
2652 4002 1.452108 GGTTCGGCCCCTCTCAATG 60.452 63.158 0.00 0.00 0.00 2.82
2653 4003 1.602237 GTTCGGCCCCTCTCAATGA 59.398 57.895 0.00 0.00 0.00 2.57
2654 4004 0.462759 GTTCGGCCCCTCTCAATGAG 60.463 60.000 3.38 3.38 42.30 2.90
2667 4017 5.983540 CTCTCAATGAGGTAAAAGCCTACT 58.016 41.667 10.71 0.00 39.34 2.57
2668 4018 5.978814 TCTCAATGAGGTAAAAGCCTACTC 58.021 41.667 10.71 0.00 39.34 2.59
2669 4019 5.099042 TCAATGAGGTAAAAGCCTACTCC 57.901 43.478 0.00 0.00 39.34 3.85
2670 4020 4.783227 TCAATGAGGTAAAAGCCTACTCCT 59.217 41.667 0.00 0.00 39.34 3.69
2671 4021 5.962031 TCAATGAGGTAAAAGCCTACTCCTA 59.038 40.000 0.00 0.00 39.34 2.94
2672 4022 5.873146 ATGAGGTAAAAGCCTACTCCTAC 57.127 43.478 0.00 0.00 39.34 3.18
2673 4023 4.944177 TGAGGTAAAAGCCTACTCCTACT 58.056 43.478 0.00 0.00 39.34 2.57
2674 4024 5.339477 TGAGGTAAAAGCCTACTCCTACTT 58.661 41.667 0.00 0.00 39.34 2.24
2675 4025 5.783875 TGAGGTAAAAGCCTACTCCTACTTT 59.216 40.000 0.00 0.00 39.34 2.66
2676 4026 6.070938 TGAGGTAAAAGCCTACTCCTACTTTC 60.071 42.308 0.00 0.00 39.34 2.62
2677 4027 5.105432 AGGTAAAAGCCTACTCCTACTTTCG 60.105 44.000 0.00 0.00 37.04 3.46
2678 4028 5.105595 GGTAAAAGCCTACTCCTACTTTCGA 60.106 44.000 0.00 0.00 31.37 3.71
2679 4029 5.678955 AAAAGCCTACTCCTACTTTCGAT 57.321 39.130 0.00 0.00 31.37 3.59
2680 4030 5.678955 AAAGCCTACTCCTACTTTCGATT 57.321 39.130 0.00 0.00 0.00 3.34
2681 4031 4.657436 AGCCTACTCCTACTTTCGATTG 57.343 45.455 0.00 0.00 0.00 2.67
2682 4032 4.024670 AGCCTACTCCTACTTTCGATTGT 58.975 43.478 0.00 0.00 0.00 2.71
2683 4033 5.198965 AGCCTACTCCTACTTTCGATTGTA 58.801 41.667 0.00 0.00 0.00 2.41
2684 4034 5.834204 AGCCTACTCCTACTTTCGATTGTAT 59.166 40.000 0.00 0.00 0.00 2.29
2685 4035 6.324254 AGCCTACTCCTACTTTCGATTGTATT 59.676 38.462 0.00 0.00 0.00 1.89
2686 4036 6.421202 GCCTACTCCTACTTTCGATTGTATTG 59.579 42.308 0.00 0.00 0.00 1.90
2687 4037 6.421202 CCTACTCCTACTTTCGATTGTATTGC 59.579 42.308 0.00 0.00 0.00 3.56
2688 4038 5.978814 ACTCCTACTTTCGATTGTATTGCT 58.021 37.500 0.00 0.00 0.00 3.91
2689 4039 6.407202 ACTCCTACTTTCGATTGTATTGCTT 58.593 36.000 0.00 0.00 0.00 3.91
2690 4040 6.313905 ACTCCTACTTTCGATTGTATTGCTTG 59.686 38.462 0.00 0.00 0.00 4.01
2691 4041 6.170506 TCCTACTTTCGATTGTATTGCTTGT 58.829 36.000 0.00 0.00 0.00 3.16
2692 4042 6.092122 TCCTACTTTCGATTGTATTGCTTGTG 59.908 38.462 0.00 0.00 0.00 3.33
2693 4043 5.689383 ACTTTCGATTGTATTGCTTGTGT 57.311 34.783 0.00 0.00 0.00 3.72
2694 4044 6.072112 ACTTTCGATTGTATTGCTTGTGTT 57.928 33.333 0.00 0.00 0.00 3.32
2695 4045 6.503524 ACTTTCGATTGTATTGCTTGTGTTT 58.496 32.000 0.00 0.00 0.00 2.83
2696 4046 6.636850 ACTTTCGATTGTATTGCTTGTGTTTC 59.363 34.615 0.00 0.00 0.00 2.78
2697 4047 4.707563 TCGATTGTATTGCTTGTGTTTCG 58.292 39.130 0.00 0.00 0.00 3.46
2698 4048 4.449405 TCGATTGTATTGCTTGTGTTTCGA 59.551 37.500 0.00 0.00 0.00 3.71
2699 4049 5.121611 TCGATTGTATTGCTTGTGTTTCGAT 59.878 36.000 0.00 0.00 0.00 3.59
2700 4050 5.794945 CGATTGTATTGCTTGTGTTTCGATT 59.205 36.000 0.00 0.00 0.00 3.34
2701 4051 6.958752 CGATTGTATTGCTTGTGTTTCGATTA 59.041 34.615 0.00 0.00 0.00 1.75
2702 4052 7.045612 CGATTGTATTGCTTGTGTTTCGATTAC 60.046 37.037 0.00 0.00 0.00 1.89
2703 4053 5.933790 TGTATTGCTTGTGTTTCGATTACC 58.066 37.500 0.00 0.00 0.00 2.85
2704 4054 5.470437 TGTATTGCTTGTGTTTCGATTACCA 59.530 36.000 0.00 0.00 0.00 3.25
2705 4055 4.481930 TTGCTTGTGTTTCGATTACCAG 57.518 40.909 0.00 0.00 0.00 4.00
2706 4056 2.811431 TGCTTGTGTTTCGATTACCAGG 59.189 45.455 0.00 0.00 0.00 4.45
2707 4057 2.161609 GCTTGTGTTTCGATTACCAGGG 59.838 50.000 0.00 0.00 0.00 4.45
2708 4058 3.670625 CTTGTGTTTCGATTACCAGGGA 58.329 45.455 0.00 0.00 0.00 4.20
2709 4059 3.328382 TGTGTTTCGATTACCAGGGAG 57.672 47.619 0.00 0.00 0.00 4.30
2710 4060 2.007608 GTGTTTCGATTACCAGGGAGC 58.992 52.381 0.00 0.00 0.00 4.70
2711 4061 1.287425 GTTTCGATTACCAGGGAGCG 58.713 55.000 0.00 0.00 0.00 5.03
2712 4062 1.134907 GTTTCGATTACCAGGGAGCGA 60.135 52.381 1.72 1.72 0.00 4.93
2713 4063 1.187974 TTCGATTACCAGGGAGCGAA 58.812 50.000 12.50 12.50 35.69 4.70
2714 4064 1.410004 TCGATTACCAGGGAGCGAAT 58.590 50.000 3.26 0.00 0.00 3.34
2715 4065 2.589720 TCGATTACCAGGGAGCGAATA 58.410 47.619 3.26 0.00 0.00 1.75
2716 4066 2.295349 TCGATTACCAGGGAGCGAATAC 59.705 50.000 3.26 0.00 0.00 1.89
2717 4067 2.673833 GATTACCAGGGAGCGAATACG 58.326 52.381 0.00 0.00 42.93 3.06
2730 4080 1.852895 CGAATACGCTTGACCTAGTGC 59.147 52.381 0.00 0.00 0.00 4.40
2731 4081 2.479730 CGAATACGCTTGACCTAGTGCT 60.480 50.000 0.00 0.00 0.00 4.40
2732 4082 2.873133 ATACGCTTGACCTAGTGCTC 57.127 50.000 0.00 0.00 0.00 4.26
2733 4083 0.450583 TACGCTTGACCTAGTGCTCG 59.549 55.000 0.00 0.00 0.00 5.03
2734 4084 1.241990 ACGCTTGACCTAGTGCTCGA 61.242 55.000 0.00 0.00 0.00 4.04
2735 4085 0.101399 CGCTTGACCTAGTGCTCGAT 59.899 55.000 0.00 0.00 0.00 3.59
2736 4086 1.846541 GCTTGACCTAGTGCTCGATC 58.153 55.000 0.00 0.00 0.00 3.69
2737 4087 1.135139 GCTTGACCTAGTGCTCGATCA 59.865 52.381 0.00 0.00 0.00 2.92
2738 4088 2.417379 GCTTGACCTAGTGCTCGATCAA 60.417 50.000 0.00 0.00 0.00 2.57
2739 4089 3.739519 GCTTGACCTAGTGCTCGATCAAT 60.740 47.826 0.00 0.00 0.00 2.57
2740 4090 4.437239 CTTGACCTAGTGCTCGATCAATT 58.563 43.478 0.00 0.00 0.00 2.32
2741 4091 5.592054 CTTGACCTAGTGCTCGATCAATTA 58.408 41.667 0.00 0.00 0.00 1.40
2742 4092 5.791336 TGACCTAGTGCTCGATCAATTAT 57.209 39.130 0.00 0.00 0.00 1.28
2743 4093 6.161855 TGACCTAGTGCTCGATCAATTATT 57.838 37.500 0.00 0.00 0.00 1.40
2744 4094 6.582636 TGACCTAGTGCTCGATCAATTATTT 58.417 36.000 0.00 0.00 0.00 1.40
2745 4095 6.701841 TGACCTAGTGCTCGATCAATTATTTC 59.298 38.462 0.00 0.00 0.00 2.17
2746 4096 6.821388 ACCTAGTGCTCGATCAATTATTTCT 58.179 36.000 0.00 0.00 0.00 2.52
2747 4097 7.275920 ACCTAGTGCTCGATCAATTATTTCTT 58.724 34.615 0.00 0.00 0.00 2.52
2748 4098 7.225538 ACCTAGTGCTCGATCAATTATTTCTTG 59.774 37.037 0.00 0.00 0.00 3.02
2749 4099 7.439356 CCTAGTGCTCGATCAATTATTTCTTGA 59.561 37.037 0.00 0.00 37.06 3.02
2750 4100 7.244166 AGTGCTCGATCAATTATTTCTTGAG 57.756 36.000 0.00 0.00 36.16 3.02
2751 4101 6.820656 AGTGCTCGATCAATTATTTCTTGAGT 59.179 34.615 0.00 0.00 36.16 3.41
2752 4102 7.335422 AGTGCTCGATCAATTATTTCTTGAGTT 59.665 33.333 0.00 0.00 36.16 3.01
2753 4103 8.604035 GTGCTCGATCAATTATTTCTTGAGTTA 58.396 33.333 0.00 0.00 36.16 2.24
2754 4104 9.161629 TGCTCGATCAATTATTTCTTGAGTTAA 57.838 29.630 0.00 0.00 36.16 2.01
2755 4105 9.427127 GCTCGATCAATTATTTCTTGAGTTAAC 57.573 33.333 0.00 0.00 36.16 2.01
2756 4106 9.922305 CTCGATCAATTATTTCTTGAGTTAACC 57.078 33.333 0.88 0.00 36.16 2.85
2757 4107 8.889717 TCGATCAATTATTTCTTGAGTTAACCC 58.110 33.333 0.88 0.00 36.16 4.11
2758 4108 8.673711 CGATCAATTATTTCTTGAGTTAACCCA 58.326 33.333 0.88 0.00 36.16 4.51
2759 4109 9.788960 GATCAATTATTTCTTGAGTTAACCCAC 57.211 33.333 0.88 0.00 36.16 4.61
2760 4110 8.117813 TCAATTATTTCTTGAGTTAACCCACC 57.882 34.615 0.88 0.00 0.00 4.61
2761 4111 6.753107 ATTATTTCTTGAGTTAACCCACCG 57.247 37.500 0.88 0.00 0.00 4.94
2762 4112 1.886886 TTCTTGAGTTAACCCACCGC 58.113 50.000 0.88 0.00 0.00 5.68
2763 4113 0.035739 TCTTGAGTTAACCCACCGCC 59.964 55.000 0.88 0.00 0.00 6.13
2764 4114 0.958876 CTTGAGTTAACCCACCGCCC 60.959 60.000 0.88 0.00 0.00 6.13
2765 4115 2.435410 GAGTTAACCCACCGCCCG 60.435 66.667 0.88 0.00 0.00 6.13
2766 4116 3.963687 GAGTTAACCCACCGCCCGG 62.964 68.421 4.96 4.96 42.03 5.73
2776 4126 4.016706 CCGCCCGGTCTCACCTTT 62.017 66.667 0.00 0.00 35.66 3.11
2777 4127 2.652095 CCGCCCGGTCTCACCTTTA 61.652 63.158 0.00 0.00 35.66 1.85
2778 4128 1.520666 CGCCCGGTCTCACCTTTAT 59.479 57.895 0.00 0.00 35.66 1.40
2779 4129 0.748450 CGCCCGGTCTCACCTTTATA 59.252 55.000 0.00 0.00 35.66 0.98
2780 4130 1.343465 CGCCCGGTCTCACCTTTATAT 59.657 52.381 0.00 0.00 35.66 0.86
2781 4131 2.559668 CGCCCGGTCTCACCTTTATATA 59.440 50.000 0.00 0.00 35.66 0.86
2782 4132 3.613432 CGCCCGGTCTCACCTTTATATAC 60.613 52.174 0.00 0.00 35.66 1.47
2783 4133 3.322828 GCCCGGTCTCACCTTTATATACA 59.677 47.826 0.00 0.00 35.66 2.29
2784 4134 4.798593 GCCCGGTCTCACCTTTATATACAC 60.799 50.000 0.00 0.00 35.66 2.90
2785 4135 4.342951 CCCGGTCTCACCTTTATATACACA 59.657 45.833 0.00 0.00 35.66 3.72
2786 4136 5.509163 CCCGGTCTCACCTTTATATACACAG 60.509 48.000 0.00 0.00 35.66 3.66
2787 4137 5.509163 CCGGTCTCACCTTTATATACACAGG 60.509 48.000 0.00 1.66 35.66 4.00
2788 4138 5.068723 CGGTCTCACCTTTATATACACAGGT 59.931 44.000 2.70 2.70 40.50 4.00
2789 4139 6.406624 CGGTCTCACCTTTATATACACAGGTT 60.407 42.308 5.14 0.00 37.56 3.50
2790 4140 6.761714 GGTCTCACCTTTATATACACAGGTTG 59.238 42.308 5.14 3.19 37.56 3.77
2791 4141 7.364408 GGTCTCACCTTTATATACACAGGTTGA 60.364 40.741 5.14 4.88 37.56 3.18
2792 4142 7.707035 GTCTCACCTTTATATACACAGGTTGAG 59.293 40.741 16.78 16.78 37.56 3.02
2793 4143 6.884832 TCACCTTTATATACACAGGTTGAGG 58.115 40.000 5.14 0.00 37.56 3.86
2794 4144 5.527582 CACCTTTATATACACAGGTTGAGGC 59.472 44.000 5.14 0.00 37.56 4.70
2795 4145 5.063880 CCTTTATATACACAGGTTGAGGCC 58.936 45.833 0.00 0.00 0.00 5.19
2796 4146 5.163195 CCTTTATATACACAGGTTGAGGCCT 60.163 44.000 3.86 3.86 39.99 5.19
2797 4147 5.546621 TTATATACACAGGTTGAGGCCTC 57.453 43.478 26.78 26.78 36.58 4.70
2798 4148 0.537188 ATACACAGGTTGAGGCCTCG 59.463 55.000 27.43 15.16 36.58 4.63
2799 4149 2.167398 TACACAGGTTGAGGCCTCGC 62.167 60.000 27.43 21.36 36.58 5.03
2800 4150 3.241530 ACAGGTTGAGGCCTCGCA 61.242 61.111 27.43 14.30 36.58 5.10
2801 4151 2.435586 CAGGTTGAGGCCTCGCAG 60.436 66.667 27.43 14.52 36.58 5.18
2802 4152 4.400961 AGGTTGAGGCCTCGCAGC 62.401 66.667 27.43 23.88 32.39 5.25
2803 4153 4.400961 GGTTGAGGCCTCGCAGCT 62.401 66.667 27.43 0.00 0.00 4.24
2804 4154 2.359230 GTTGAGGCCTCGCAGCTT 60.359 61.111 27.43 0.00 0.00 3.74
2805 4155 1.079127 GTTGAGGCCTCGCAGCTTA 60.079 57.895 27.43 5.35 0.00 3.09
2806 4156 1.079127 TTGAGGCCTCGCAGCTTAC 60.079 57.895 27.43 1.45 0.00 2.34
2807 4157 2.583593 GAGGCCTCGCAGCTTACG 60.584 66.667 19.06 0.00 0.00 3.18
2808 4158 3.064987 GAGGCCTCGCAGCTTACGA 62.065 63.158 19.06 8.23 38.02 3.43
2809 4159 2.125673 GGCCTCGCAGCTTACGAA 60.126 61.111 9.66 0.00 39.39 3.85
2810 4160 2.167861 GGCCTCGCAGCTTACGAAG 61.168 63.158 9.66 5.29 39.39 3.79
2812 4162 1.414527 GCCTCGCAGCTTACGAAGTC 61.415 60.000 9.66 0.00 43.93 3.01
2813 4163 0.802607 CCTCGCAGCTTACGAAGTCC 60.803 60.000 9.66 0.00 43.93 3.85
2814 4164 1.134530 CTCGCAGCTTACGAAGTCCG 61.135 60.000 9.66 0.00 43.93 4.79
2815 4165 2.158959 CGCAGCTTACGAAGTCCGG 61.159 63.158 0.00 0.00 43.93 5.14
2816 4166 2.453638 GCAGCTTACGAAGTCCGGC 61.454 63.158 0.00 0.00 43.93 6.13
2817 4167 1.810030 CAGCTTACGAAGTCCGGCC 60.810 63.158 0.00 0.00 43.93 6.13
2820 4170 2.990967 TTACGAAGTCCGGCCGGT 60.991 61.111 41.57 25.47 43.93 5.28
2829 4179 3.656045 CCGGCCGGTTCACACAAC 61.656 66.667 36.64 0.00 0.00 3.32
2844 4194 0.458669 ACAACGTGACTGACTCGGTT 59.541 50.000 6.55 0.00 39.38 4.44
2847 4197 1.030457 ACGTGACTGACTCGGTTTCT 58.970 50.000 6.55 0.00 39.38 2.52
2848 4198 2.224606 ACGTGACTGACTCGGTTTCTA 58.775 47.619 6.55 0.00 39.38 2.10
2849 4199 2.620115 ACGTGACTGACTCGGTTTCTAA 59.380 45.455 6.55 0.00 39.38 2.10
2851 4201 3.549423 CGTGACTGACTCGGTTTCTAACA 60.549 47.826 0.00 0.00 32.81 2.41
2853 4203 4.208666 GTGACTGACTCGGTTTCTAACAAC 59.791 45.833 0.00 0.00 0.00 3.32
2854 4204 4.142116 TGACTGACTCGGTTTCTAACAACA 60.142 41.667 0.00 0.00 0.00 3.33
2856 4206 4.142004 ACTGACTCGGTTTCTAACAACACT 60.142 41.667 0.00 0.00 0.00 3.55
2859 4209 3.311596 ACTCGGTTTCTAACAACACTTGC 59.688 43.478 0.00 0.00 0.00 4.01
2861 4211 2.616842 CGGTTTCTAACAACACTTGCCT 59.383 45.455 0.00 0.00 0.00 4.75
2862 4212 3.066203 CGGTTTCTAACAACACTTGCCTT 59.934 43.478 0.00 0.00 0.00 4.35
2863 4213 4.273969 CGGTTTCTAACAACACTTGCCTTA 59.726 41.667 0.00 0.00 0.00 2.69
2864 4214 5.516996 GGTTTCTAACAACACTTGCCTTAC 58.483 41.667 0.00 0.00 0.00 2.34
2865 4215 5.066764 GGTTTCTAACAACACTTGCCTTACA 59.933 40.000 0.00 0.00 0.00 2.41
2867 4217 5.284861 TCTAACAACACTTGCCTTACAGA 57.715 39.130 0.00 0.00 0.00 3.41
2869 4219 4.632538 AACAACACTTGCCTTACAGAAC 57.367 40.909 0.00 0.00 0.00 3.01
2870 4220 3.616219 ACAACACTTGCCTTACAGAACA 58.384 40.909 0.00 0.00 0.00 3.18
2871 4221 4.013728 ACAACACTTGCCTTACAGAACAA 58.986 39.130 0.00 0.00 0.00 2.83
2872 4222 4.096382 ACAACACTTGCCTTACAGAACAAG 59.904 41.667 0.00 0.00 43.99 3.16
2880 4230 6.952773 TGCCTTACAGAACAAGTTAAACAT 57.047 33.333 0.00 0.00 0.00 2.71
2881 4231 8.453238 TTGCCTTACAGAACAAGTTAAACATA 57.547 30.769 0.00 0.00 0.00 2.29
2883 4233 8.511321 TGCCTTACAGAACAAGTTAAACATATG 58.489 33.333 0.00 0.00 0.00 1.78
2884 4234 7.968405 GCCTTACAGAACAAGTTAAACATATGG 59.032 37.037 7.80 0.00 0.00 2.74
2887 4237 5.106317 ACAGAACAAGTTAAACATATGGCGG 60.106 40.000 7.80 0.00 0.00 6.13
2888 4238 3.775661 ACAAGTTAAACATATGGCGGC 57.224 42.857 7.80 0.00 0.00 6.53
2889 4239 3.352648 ACAAGTTAAACATATGGCGGCT 58.647 40.909 11.43 0.00 0.00 5.52
2890 4240 3.377172 ACAAGTTAAACATATGGCGGCTC 59.623 43.478 11.43 0.00 0.00 4.70
2894 4244 1.609208 AAACATATGGCGGCTCATCC 58.391 50.000 11.43 0.00 0.00 3.51
2896 4246 1.130054 ACATATGGCGGCTCATCCCT 61.130 55.000 11.43 0.00 0.00 4.20
2898 4248 0.773644 ATATGGCGGCTCATCCCTTT 59.226 50.000 11.43 0.00 0.00 3.11
2899 4249 0.179020 TATGGCGGCTCATCCCTTTG 60.179 55.000 11.43 0.00 0.00 2.77
2900 4250 2.830370 GGCGGCTCATCCCTTTGG 60.830 66.667 0.00 0.00 0.00 3.28
2902 4252 2.830370 CGGCTCATCCCTTTGGGC 60.830 66.667 0.00 0.00 43.94 5.36
2905 4255 1.454663 GCTCATCCCTTTGGGCCTC 60.455 63.158 4.53 0.00 43.94 4.70
2907 4257 0.332632 CTCATCCCTTTGGGCCTCAA 59.667 55.000 4.53 2.07 43.94 3.02
2908 4258 0.332632 TCATCCCTTTGGGCCTCAAG 59.667 55.000 4.53 7.09 43.94 3.02
2909 4259 0.040204 CATCCCTTTGGGCCTCAAGT 59.960 55.000 4.53 0.00 43.94 3.16
2910 4260 0.332972 ATCCCTTTGGGCCTCAAGTC 59.667 55.000 4.53 0.00 43.94 3.01
2912 4262 0.895559 CCCTTTGGGCCTCAAGTCAC 60.896 60.000 4.53 0.00 35.35 3.67
2913 4263 0.895559 CCTTTGGGCCTCAAGTCACC 60.896 60.000 4.53 0.00 36.62 4.02
2915 4265 0.110486 TTTGGGCCTCAAGTCACCTC 59.890 55.000 4.53 0.00 36.62 3.85
2916 4266 1.779061 TTGGGCCTCAAGTCACCTCC 61.779 60.000 4.53 0.00 0.00 4.30
2917 4267 2.266055 GGCCTCAAGTCACCTCCG 59.734 66.667 0.00 0.00 0.00 4.63
2918 4268 2.266055 GCCTCAAGTCACCTCCGG 59.734 66.667 0.00 0.00 0.00 5.14
2919 4269 2.982130 CCTCAAGTCACCTCCGGG 59.018 66.667 0.00 0.00 38.88 5.73
2921 4271 1.592223 CTCAAGTCACCTCCGGGTC 59.408 63.158 0.00 0.00 45.41 4.46
2922 4272 0.900647 CTCAAGTCACCTCCGGGTCT 60.901 60.000 0.00 0.00 45.41 3.85
2923 4273 0.471211 TCAAGTCACCTCCGGGTCTT 60.471 55.000 0.00 0.00 45.41 3.01
2924 4274 0.320771 CAAGTCACCTCCGGGTCTTG 60.321 60.000 0.00 1.17 45.41 3.02
2925 4275 1.481056 AAGTCACCTCCGGGTCTTGG 61.481 60.000 0.00 0.00 45.41 3.61
2926 4276 2.606519 TCACCTCCGGGTCTTGGG 60.607 66.667 0.00 0.00 45.41 4.12
2927 4277 4.410400 CACCTCCGGGTCTTGGGC 62.410 72.222 0.00 0.00 45.41 5.36
2930 4280 3.330720 CTCCGGGTCTTGGGCCTT 61.331 66.667 4.53 0.00 0.00 4.35
2931 4281 3.327404 TCCGGGTCTTGGGCCTTC 61.327 66.667 4.53 0.00 0.00 3.46
2932 4282 3.646715 CCGGGTCTTGGGCCTTCA 61.647 66.667 4.53 0.00 0.00 3.02
2933 4283 2.434331 CGGGTCTTGGGCCTTCAA 59.566 61.111 4.53 0.00 0.00 2.69
2934 4284 1.000896 CGGGTCTTGGGCCTTCAAT 60.001 57.895 4.53 0.00 0.00 2.57
2935 4285 0.254747 CGGGTCTTGGGCCTTCAATA 59.745 55.000 4.53 0.00 0.00 1.90
2936 4286 1.340600 CGGGTCTTGGGCCTTCAATAA 60.341 52.381 4.53 0.00 0.00 1.40
2937 4287 2.379005 GGGTCTTGGGCCTTCAATAAG 58.621 52.381 4.53 0.00 0.00 1.73
2938 4288 1.751351 GGTCTTGGGCCTTCAATAAGC 59.249 52.381 4.53 0.00 0.00 3.09
2939 4289 2.621668 GGTCTTGGGCCTTCAATAAGCT 60.622 50.000 4.53 0.00 0.00 3.74
2940 4290 3.092301 GTCTTGGGCCTTCAATAAGCTT 58.908 45.455 4.53 3.48 0.00 3.74
2941 4291 3.091545 TCTTGGGCCTTCAATAAGCTTG 58.908 45.455 9.86 0.00 0.00 4.01
2942 4292 1.185315 TGGGCCTTCAATAAGCTTGC 58.815 50.000 9.86 1.18 0.00 4.01
2943 4293 1.272648 TGGGCCTTCAATAAGCTTGCT 60.273 47.619 9.86 0.00 0.00 3.91
2944 4294 1.827344 GGGCCTTCAATAAGCTTGCTT 59.173 47.619 9.86 12.65 0.00 3.91
2945 4295 2.234661 GGGCCTTCAATAAGCTTGCTTT 59.765 45.455 13.27 0.00 0.00 3.51
2946 4296 3.447229 GGGCCTTCAATAAGCTTGCTTTA 59.553 43.478 13.27 0.80 0.00 1.85
2947 4297 4.100035 GGGCCTTCAATAAGCTTGCTTTAT 59.900 41.667 13.27 0.38 0.00 1.40
2948 4298 5.045872 GGCCTTCAATAAGCTTGCTTTATG 58.954 41.667 13.27 12.12 0.00 1.90
2949 4299 5.163519 GGCCTTCAATAAGCTTGCTTTATGA 60.164 40.000 13.27 13.98 0.00 2.15
2950 4300 6.332630 GCCTTCAATAAGCTTGCTTTATGAA 58.667 36.000 22.18 22.18 0.00 2.57
2951 4301 6.254373 GCCTTCAATAAGCTTGCTTTATGAAC 59.746 38.462 20.91 13.88 0.00 3.18
2952 4302 6.753744 CCTTCAATAAGCTTGCTTTATGAACC 59.246 38.462 20.91 0.00 0.00 3.62
2953 4303 5.879237 TCAATAAGCTTGCTTTATGAACCG 58.121 37.500 13.27 0.00 0.00 4.44
2954 4304 2.636768 AAGCTTGCTTTATGAACCGC 57.363 45.000 0.00 0.00 0.00 5.68
2955 4305 0.811281 AGCTTGCTTTATGAACCGCC 59.189 50.000 0.00 0.00 0.00 6.13
2956 4306 0.525761 GCTTGCTTTATGAACCGCCA 59.474 50.000 0.00 0.00 0.00 5.69
2957 4307 1.134946 GCTTGCTTTATGAACCGCCAT 59.865 47.619 0.00 0.00 0.00 4.40
2958 4308 2.796032 GCTTGCTTTATGAACCGCCATC 60.796 50.000 0.00 0.00 0.00 3.51
2959 4309 2.418368 TGCTTTATGAACCGCCATCT 57.582 45.000 0.00 0.00 0.00 2.90
2960 4310 2.722094 TGCTTTATGAACCGCCATCTT 58.278 42.857 0.00 0.00 0.00 2.40
2961 4311 2.682856 TGCTTTATGAACCGCCATCTTC 59.317 45.455 0.00 0.00 0.00 2.87
2962 4312 2.682856 GCTTTATGAACCGCCATCTTCA 59.317 45.455 0.00 0.00 0.00 3.02
2963 4313 3.316308 GCTTTATGAACCGCCATCTTCAT 59.684 43.478 0.00 0.00 39.79 2.57
2964 4314 4.515191 GCTTTATGAACCGCCATCTTCATA 59.485 41.667 0.00 0.00 38.01 2.15
2965 4315 5.182001 GCTTTATGAACCGCCATCTTCATAT 59.818 40.000 0.00 0.00 38.54 1.78
2966 4316 6.621596 GCTTTATGAACCGCCATCTTCATATC 60.622 42.308 0.00 0.00 38.54 1.63
2967 4317 4.630644 ATGAACCGCCATCTTCATATCT 57.369 40.909 0.00 0.00 35.72 1.98
2968 4318 4.422073 TGAACCGCCATCTTCATATCTT 57.578 40.909 0.00 0.00 0.00 2.40
2969 4319 4.380531 TGAACCGCCATCTTCATATCTTC 58.619 43.478 0.00 0.00 0.00 2.87
2970 4320 4.101585 TGAACCGCCATCTTCATATCTTCT 59.898 41.667 0.00 0.00 0.00 2.85
2971 4321 4.696479 ACCGCCATCTTCATATCTTCTT 57.304 40.909 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
128 130 2.685897 TGAACCAAGGAGTGTTTTTCCG 59.314 45.455 0.00 0.00 39.77 4.30
177 181 2.557924 GACACCATGCCAAGTTTCATCA 59.442 45.455 0.00 0.00 0.00 3.07
278 282 2.017782 TGATAGTCCGTCAGAGAGTGC 58.982 52.381 0.00 0.00 0.00 4.40
293 297 5.459107 CACTTACCGTTCGAAATCCTGATAG 59.541 44.000 0.00 0.00 0.00 2.08
301 305 3.389925 TCCACACTTACCGTTCGAAAT 57.610 42.857 0.00 0.00 0.00 2.17
372 380 8.780846 ATTTCGAGTGGTGTGTGTTAAATATA 57.219 30.769 0.00 0.00 0.00 0.86
393 401 5.299279 TGTGTGGAAAGTCTCCTTTGATTTC 59.701 40.000 0.00 0.00 45.64 2.17
542 553 8.273780 AGAGACCTTTTGCTTCTATTTGTATG 57.726 34.615 0.00 0.00 0.00 2.39
588 599 3.815507 TCTTCTATCCTTCCCCCACTTT 58.184 45.455 0.00 0.00 0.00 2.66
591 602 4.079730 ACATTTCTTCTATCCTTCCCCCAC 60.080 45.833 0.00 0.00 0.00 4.61
707 718 8.311109 GGGCAGAGTTTAATTTTCCTTATTCAA 58.689 33.333 0.00 0.00 0.00 2.69
710 721 6.661805 TCGGGCAGAGTTTAATTTTCCTTATT 59.338 34.615 0.00 0.00 0.00 1.40
711 722 6.184789 TCGGGCAGAGTTTAATTTTCCTTAT 58.815 36.000 0.00 0.00 0.00 1.73
712 723 5.562635 TCGGGCAGAGTTTAATTTTCCTTA 58.437 37.500 0.00 0.00 0.00 2.69
715 726 4.495844 CGATCGGGCAGAGTTTAATTTTCC 60.496 45.833 7.38 0.00 0.00 3.13
716 727 4.588278 CGATCGGGCAGAGTTTAATTTTC 58.412 43.478 7.38 0.00 0.00 2.29
718 729 2.354821 GCGATCGGGCAGAGTTTAATTT 59.645 45.455 18.30 0.00 0.00 1.82
719 730 1.940613 GCGATCGGGCAGAGTTTAATT 59.059 47.619 18.30 0.00 0.00 1.40
721 732 0.248012 TGCGATCGGGCAGAGTTTAA 59.752 50.000 18.30 0.00 38.17 1.52
722 733 0.248012 TTGCGATCGGGCAGAGTTTA 59.752 50.000 18.30 0.00 44.94 2.01
725 736 0.811616 GATTTGCGATCGGGCAGAGT 60.812 55.000 18.30 0.00 44.94 3.24
726 737 0.811219 TGATTTGCGATCGGGCAGAG 60.811 55.000 18.30 0.00 44.94 3.35
728 739 0.811219 TCTGATTTGCGATCGGGCAG 60.811 55.000 18.30 0.00 44.94 4.85
729 740 0.179048 ATCTGATTTGCGATCGGGCA 60.179 50.000 18.30 3.96 42.12 5.36
732 743 7.492669 ACCTTATTATATCTGATTTGCGATCGG 59.507 37.037 18.30 0.00 0.00 4.18
733 744 8.412608 ACCTTATTATATCTGATTTGCGATCG 57.587 34.615 11.69 11.69 0.00 3.69
734 745 9.593134 AGACCTTATTATATCTGATTTGCGATC 57.407 33.333 0.00 0.00 0.00 3.69
735 746 9.950496 AAGACCTTATTATATCTGATTTGCGAT 57.050 29.630 0.00 0.00 0.00 4.58
756 767 7.844779 TGTAGGATCCCTCCATAATATAAGACC 59.155 40.741 8.55 0.00 44.79 3.85
757 768 8.840200 TGTAGGATCCCTCCATAATATAAGAC 57.160 38.462 8.55 0.00 44.79 3.01
759 770 9.218525 ACATGTAGGATCCCTCCATAATATAAG 57.781 37.037 8.55 0.00 44.79 1.73
761 772 8.992349 CAACATGTAGGATCCCTCCATAATATA 58.008 37.037 8.55 0.00 44.79 0.86
762 773 7.684186 TCAACATGTAGGATCCCTCCATAATAT 59.316 37.037 8.55 0.00 44.79 1.28
769 780 4.503714 TTTCAACATGTAGGATCCCTCC 57.496 45.455 8.55 0.00 42.43 4.30
770 781 8.519799 TTTATTTTCAACATGTAGGATCCCTC 57.480 34.615 8.55 2.19 34.61 4.30
771 782 8.893563 TTTTATTTTCAACATGTAGGATCCCT 57.106 30.769 8.55 0.00 37.71 4.20
797 808 7.967854 CGTGTTTGACATGTTCCATATACAATT 59.032 33.333 0.00 0.00 30.72 2.32
834 845 6.126863 TGATGTTGAACTTCTTGGTAGGAT 57.873 37.500 11.71 0.00 0.00 3.24
842 853 6.480981 CCATTTTGCTTGATGTTGAACTTCTT 59.519 34.615 11.71 0.00 0.00 2.52
843 854 5.987347 CCATTTTGCTTGATGTTGAACTTCT 59.013 36.000 11.71 0.00 0.00 2.85
844 855 5.333568 GCCATTTTGCTTGATGTTGAACTTC 60.334 40.000 4.44 4.44 0.00 3.01
857 868 7.278868 GCTATATATAGTCTCGCCATTTTGCTT 59.721 37.037 18.81 0.00 32.96 3.91
858 869 6.758886 GCTATATATAGTCTCGCCATTTTGCT 59.241 38.462 18.81 0.00 32.96 3.91
869 880 8.680039 ACGGTATGGAAGCTATATATAGTCTC 57.320 38.462 18.81 14.88 32.96 3.36
871 882 9.122779 AGAACGGTATGGAAGCTATATATAGTC 57.877 37.037 18.81 10.63 32.96 2.59
917 929 4.723309 AGGGAATGAAGGAATATCACAGC 58.277 43.478 0.00 0.00 0.00 4.40
924 936 5.455326 GCTGCTAGAAGGGAATGAAGGAATA 60.455 44.000 0.00 0.00 0.00 1.75
1443 1666 1.754621 CCCTCCAGCTAGCTCGACA 60.755 63.158 16.15 0.00 0.00 4.35
1502 1725 3.084579 CGCTCTCGATGTTGGTGC 58.915 61.111 0.00 0.00 38.10 5.01
1534 1757 0.608640 TCAAGAGAGTCGAAAGGGCC 59.391 55.000 0.00 0.00 0.00 5.80
1551 1774 2.244486 ACTTCTCCTGGAGCATCTCA 57.756 50.000 19.08 0.00 33.73 3.27
1675 1898 0.681564 ACGAGCGTCTCCTCATCCTT 60.682 55.000 0.00 0.00 0.00 3.36
1782 2005 4.697352 GCAACAGGATCAGACAACATTACT 59.303 41.667 0.00 0.00 0.00 2.24
1818 2041 2.809174 CTGCGAACGATCCGTGCA 60.809 61.111 0.00 4.83 39.99 4.57
1878 2101 2.122783 TCCCCATTTTGACCATCGAC 57.877 50.000 0.00 0.00 0.00 4.20
2117 2341 7.307694 TGAAGACAAGTCATTTGATATGCAAC 58.692 34.615 2.72 0.00 39.21 4.17
2153 2378 2.213499 AGCAGTGGTAAAGCGATATGC 58.787 47.619 0.00 0.00 46.98 3.14
2287 3636 3.888930 CACAAAAACTTGCCTCCTTCCTA 59.111 43.478 0.00 0.00 0.00 2.94
2356 3705 6.781138 TGTCTCCAACGTTATTCATTAATGC 58.219 36.000 10.76 0.00 31.07 3.56
2481 3831 7.618117 TGGACTACTACACATTTAGAAGGATGA 59.382 37.037 0.00 0.00 0.00 2.92
2511 3861 1.609635 TAAATCCACGAGAGCGGCCA 61.610 55.000 2.24 0.00 43.17 5.36
2515 3865 1.927174 CCTGTTAAATCCACGAGAGCG 59.073 52.381 0.00 0.00 44.79 5.03
2516 3866 2.280628 CCCTGTTAAATCCACGAGAGC 58.719 52.381 0.00 0.00 0.00 4.09
2517 3867 2.280628 GCCCTGTTAAATCCACGAGAG 58.719 52.381 0.00 0.00 0.00 3.20
2518 3868 1.626321 TGCCCTGTTAAATCCACGAGA 59.374 47.619 0.00 0.00 0.00 4.04
2519 3869 2.009774 CTGCCCTGTTAAATCCACGAG 58.990 52.381 0.00 0.00 0.00 4.18
2520 3870 1.626321 TCTGCCCTGTTAAATCCACGA 59.374 47.619 0.00 0.00 0.00 4.35
2521 3871 2.107950 TCTGCCCTGTTAAATCCACG 57.892 50.000 0.00 0.00 0.00 4.94
2522 3872 2.099756 GCATCTGCCCTGTTAAATCCAC 59.900 50.000 0.00 0.00 34.31 4.02
2523 3873 2.378038 GCATCTGCCCTGTTAAATCCA 58.622 47.619 0.00 0.00 34.31 3.41
2536 3886 1.162800 CCTTTCGCTAGGGCATCTGC 61.163 60.000 1.02 0.00 38.60 4.26
2537 3887 0.465705 TCCTTTCGCTAGGGCATCTG 59.534 55.000 1.02 0.00 38.60 2.90
2538 3888 0.466124 GTCCTTTCGCTAGGGCATCT 59.534 55.000 1.02 0.00 39.78 2.90
2539 3889 0.466124 AGTCCTTTCGCTAGGGCATC 59.534 55.000 9.47 0.00 42.56 3.91
2540 3890 0.912486 AAGTCCTTTCGCTAGGGCAT 59.088 50.000 9.47 0.00 42.56 4.40
2541 3891 1.480954 CTAAGTCCTTTCGCTAGGGCA 59.519 52.381 9.47 0.00 42.56 5.36
2542 3892 1.202545 CCTAAGTCCTTTCGCTAGGGC 60.203 57.143 1.02 0.00 40.33 5.19
2543 3893 2.108970 ACCTAAGTCCTTTCGCTAGGG 58.891 52.381 0.00 0.00 35.90 3.53
2544 3894 2.496470 ACACCTAAGTCCTTTCGCTAGG 59.504 50.000 0.00 0.00 36.59 3.02
2545 3895 3.512680 CACACCTAAGTCCTTTCGCTAG 58.487 50.000 0.00 0.00 0.00 3.42
2546 3896 2.232941 CCACACCTAAGTCCTTTCGCTA 59.767 50.000 0.00 0.00 0.00 4.26
2547 3897 1.002087 CCACACCTAAGTCCTTTCGCT 59.998 52.381 0.00 0.00 0.00 4.93
2548 3898 1.001633 TCCACACCTAAGTCCTTTCGC 59.998 52.381 0.00 0.00 0.00 4.70
2549 3899 2.931320 GCTCCACACCTAAGTCCTTTCG 60.931 54.545 0.00 0.00 0.00 3.46
2550 3900 2.615747 GGCTCCACACCTAAGTCCTTTC 60.616 54.545 0.00 0.00 0.00 2.62
2551 3901 1.351350 GGCTCCACACCTAAGTCCTTT 59.649 52.381 0.00 0.00 0.00 3.11
2552 3902 0.984995 GGCTCCACACCTAAGTCCTT 59.015 55.000 0.00 0.00 0.00 3.36
2553 3903 0.178903 TGGCTCCACACCTAAGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
2554 3904 0.912486 ATGGCTCCACACCTAAGTCC 59.088 55.000 0.00 0.00 0.00 3.85
2555 3905 1.471676 CGATGGCTCCACACCTAAGTC 60.472 57.143 0.00 0.00 0.00 3.01
2556 3906 0.537188 CGATGGCTCCACACCTAAGT 59.463 55.000 0.00 0.00 0.00 2.24
2557 3907 0.537188 ACGATGGCTCCACACCTAAG 59.463 55.000 0.00 0.00 0.00 2.18
2558 3908 1.754803 CTACGATGGCTCCACACCTAA 59.245 52.381 0.00 0.00 0.00 2.69
2559 3909 1.399714 CTACGATGGCTCCACACCTA 58.600 55.000 0.00 0.00 0.00 3.08
2560 3910 1.961180 GCTACGATGGCTCCACACCT 61.961 60.000 0.00 0.00 0.00 4.00
2561 3911 1.521681 GCTACGATGGCTCCACACC 60.522 63.158 0.00 0.00 0.00 4.16
2562 3912 1.878522 CGCTACGATGGCTCCACAC 60.879 63.158 0.00 0.00 0.00 3.82
2563 3913 2.004808 CTCGCTACGATGGCTCCACA 62.005 60.000 0.00 0.00 34.61 4.17
2564 3914 1.299468 CTCGCTACGATGGCTCCAC 60.299 63.158 0.00 0.00 34.61 4.02
2565 3915 2.490148 CCTCGCTACGATGGCTCCA 61.490 63.158 0.00 0.00 34.61 3.86
2566 3916 2.017559 AACCTCGCTACGATGGCTCC 62.018 60.000 0.00 0.00 34.61 4.70
2567 3917 0.666913 TAACCTCGCTACGATGGCTC 59.333 55.000 0.00 0.00 34.61 4.70
2568 3918 0.669077 CTAACCTCGCTACGATGGCT 59.331 55.000 0.00 0.00 34.61 4.75
2569 3919 0.940047 GCTAACCTCGCTACGATGGC 60.940 60.000 0.00 0.00 34.61 4.40
2570 3920 0.669077 AGCTAACCTCGCTACGATGG 59.331 55.000 0.00 0.00 35.63 3.51
2571 3921 2.493713 AAGCTAACCTCGCTACGATG 57.506 50.000 0.00 0.00 36.56 3.84
2572 3922 4.499357 CCTTTAAGCTAACCTCGCTACGAT 60.499 45.833 0.00 0.00 36.56 3.73
2573 3923 3.181493 CCTTTAAGCTAACCTCGCTACGA 60.181 47.826 0.00 0.00 36.56 3.43
2574 3924 3.114065 CCTTTAAGCTAACCTCGCTACG 58.886 50.000 0.00 0.00 36.56 3.51
2575 3925 3.455327 CCCTTTAAGCTAACCTCGCTAC 58.545 50.000 0.00 0.00 36.56 3.58
2576 3926 2.433239 CCCCTTTAAGCTAACCTCGCTA 59.567 50.000 0.00 0.00 36.56 4.26
2577 3927 1.209747 CCCCTTTAAGCTAACCTCGCT 59.790 52.381 0.00 0.00 39.94 4.93
2578 3928 1.065636 ACCCCTTTAAGCTAACCTCGC 60.066 52.381 0.00 0.00 0.00 5.03
2579 3929 3.345508 AACCCCTTTAAGCTAACCTCG 57.654 47.619 0.00 0.00 0.00 4.63
2588 3938 2.290450 TGTCCCGCTTAACCCCTTTAAG 60.290 50.000 0.28 0.28 46.75 1.85
2589 3939 1.704070 TGTCCCGCTTAACCCCTTTAA 59.296 47.619 0.00 0.00 0.00 1.52
2590 3940 1.360185 TGTCCCGCTTAACCCCTTTA 58.640 50.000 0.00 0.00 0.00 1.85
2591 3941 0.479378 TTGTCCCGCTTAACCCCTTT 59.521 50.000 0.00 0.00 0.00 3.11
2592 3942 0.479378 TTTGTCCCGCTTAACCCCTT 59.521 50.000 0.00 0.00 0.00 3.95
2593 3943 0.251033 GTTTGTCCCGCTTAACCCCT 60.251 55.000 0.00 0.00 0.00 4.79
2594 3944 1.579964 CGTTTGTCCCGCTTAACCCC 61.580 60.000 0.00 0.00 0.00 4.95
2595 3945 0.603439 TCGTTTGTCCCGCTTAACCC 60.603 55.000 0.00 0.00 0.00 4.11
2596 3946 0.514255 GTCGTTTGTCCCGCTTAACC 59.486 55.000 0.00 0.00 0.00 2.85
2597 3947 1.070376 GTGTCGTTTGTCCCGCTTAAC 60.070 52.381 0.00 0.00 0.00 2.01
2598 3948 1.219646 GTGTCGTTTGTCCCGCTTAA 58.780 50.000 0.00 0.00 0.00 1.85
2599 3949 0.104487 TGTGTCGTTTGTCCCGCTTA 59.896 50.000 0.00 0.00 0.00 3.09
2600 3950 1.153329 TGTGTCGTTTGTCCCGCTT 60.153 52.632 0.00 0.00 0.00 4.68
2601 3951 1.594293 CTGTGTCGTTTGTCCCGCT 60.594 57.895 0.00 0.00 0.00 5.52
2602 3952 1.557443 CTCTGTGTCGTTTGTCCCGC 61.557 60.000 0.00 0.00 0.00 6.13
2603 3953 0.031585 TCTCTGTGTCGTTTGTCCCG 59.968 55.000 0.00 0.00 0.00 5.14
2604 3954 1.068741 ACTCTCTGTGTCGTTTGTCCC 59.931 52.381 0.00 0.00 0.00 4.46
2605 3955 2.510768 ACTCTCTGTGTCGTTTGTCC 57.489 50.000 0.00 0.00 0.00 4.02
2606 3956 6.089150 GGTAAATACTCTCTGTGTCGTTTGTC 59.911 42.308 0.00 0.00 0.00 3.18
2607 3957 5.924825 GGTAAATACTCTCTGTGTCGTTTGT 59.075 40.000 0.00 0.00 0.00 2.83
2608 3958 5.347907 GGGTAAATACTCTCTGTGTCGTTTG 59.652 44.000 0.00 0.00 0.00 2.93
2609 3959 5.011329 TGGGTAAATACTCTCTGTGTCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
2610 3960 4.525487 TGGGTAAATACTCTCTGTGTCGTT 59.475 41.667 0.00 0.00 0.00 3.85
2611 3961 4.084287 TGGGTAAATACTCTCTGTGTCGT 58.916 43.478 0.00 0.00 0.00 4.34
2612 3962 4.440250 CCTGGGTAAATACTCTCTGTGTCG 60.440 50.000 0.00 0.00 0.00 4.35
2613 3963 4.466726 ACCTGGGTAAATACTCTCTGTGTC 59.533 45.833 0.00 0.00 0.00 3.67
2614 3964 4.426704 ACCTGGGTAAATACTCTCTGTGT 58.573 43.478 0.00 0.00 0.00 3.72
2615 3965 5.420409 GAACCTGGGTAAATACTCTCTGTG 58.580 45.833 0.00 0.00 0.00 3.66
2616 3966 4.159879 CGAACCTGGGTAAATACTCTCTGT 59.840 45.833 0.00 0.00 0.00 3.41
2617 3967 4.441634 CCGAACCTGGGTAAATACTCTCTG 60.442 50.000 0.00 0.00 0.00 3.35
2618 3968 3.705072 CCGAACCTGGGTAAATACTCTCT 59.295 47.826 0.00 0.00 0.00 3.10
2619 3969 3.740452 GCCGAACCTGGGTAAATACTCTC 60.740 52.174 0.00 0.00 0.00 3.20
2620 3970 2.169978 GCCGAACCTGGGTAAATACTCT 59.830 50.000 0.00 0.00 0.00 3.24
2621 3971 2.558378 GCCGAACCTGGGTAAATACTC 58.442 52.381 0.00 0.00 0.00 2.59
2622 3972 1.211212 GGCCGAACCTGGGTAAATACT 59.789 52.381 0.00 0.00 34.51 2.12
2623 3973 1.671979 GGCCGAACCTGGGTAAATAC 58.328 55.000 0.00 0.00 34.51 1.89
2624 3974 0.547553 GGGCCGAACCTGGGTAAATA 59.452 55.000 0.00 0.00 39.10 1.40
2625 3975 1.305287 GGGCCGAACCTGGGTAAAT 59.695 57.895 0.00 0.00 39.10 1.40
2626 3976 2.758434 GGGCCGAACCTGGGTAAA 59.242 61.111 0.00 0.00 39.10 2.01
2627 3977 3.332385 GGGGCCGAACCTGGGTAA 61.332 66.667 0.00 0.00 39.10 2.85
2628 3978 4.342086 AGGGGCCGAACCTGGGTA 62.342 66.667 0.00 0.00 36.85 3.69
2631 3981 3.787001 GAGAGGGGCCGAACCTGG 61.787 72.222 3.42 0.00 38.79 4.45
2632 3982 1.915078 ATTGAGAGGGGCCGAACCTG 61.915 60.000 3.42 0.00 38.79 4.00
2633 3983 1.616628 ATTGAGAGGGGCCGAACCT 60.617 57.895 0.00 0.00 42.18 3.50
2634 3984 1.452108 CATTGAGAGGGGCCGAACC 60.452 63.158 0.00 0.00 37.93 3.62
2635 3985 0.462759 CTCATTGAGAGGGGCCGAAC 60.463 60.000 8.00 0.00 40.84 3.95
2636 3986 1.907739 CTCATTGAGAGGGGCCGAA 59.092 57.895 8.00 0.00 40.84 4.30
2637 3987 3.634202 CTCATTGAGAGGGGCCGA 58.366 61.111 8.00 0.00 40.84 5.54
2644 3994 5.983540 AGTAGGCTTTTACCTCATTGAGAG 58.016 41.667 15.36 7.77 41.50 3.20
2645 3995 5.104900 GGAGTAGGCTTTTACCTCATTGAGA 60.105 44.000 15.36 0.00 41.50 3.27
2646 3996 5.104735 AGGAGTAGGCTTTTACCTCATTGAG 60.105 44.000 6.70 6.70 41.50 3.02
2647 3997 4.783227 AGGAGTAGGCTTTTACCTCATTGA 59.217 41.667 0.00 0.00 41.50 2.57
2648 3998 5.104259 AGGAGTAGGCTTTTACCTCATTG 57.896 43.478 0.00 0.00 41.50 2.82
2649 3999 5.965091 AGTAGGAGTAGGCTTTTACCTCATT 59.035 40.000 0.00 0.00 41.50 2.57
2650 4000 5.530243 AGTAGGAGTAGGCTTTTACCTCAT 58.470 41.667 0.00 0.00 41.50 2.90
2651 4001 4.944177 AGTAGGAGTAGGCTTTTACCTCA 58.056 43.478 0.00 0.00 41.50 3.86
2652 4002 5.936187 AAGTAGGAGTAGGCTTTTACCTC 57.064 43.478 0.00 0.00 41.50 3.85
2653 4003 5.105432 CGAAAGTAGGAGTAGGCTTTTACCT 60.105 44.000 0.00 0.00 44.31 3.08
2654 4004 5.105595 TCGAAAGTAGGAGTAGGCTTTTACC 60.106 44.000 0.00 0.00 32.14 2.85
2655 4005 5.958955 TCGAAAGTAGGAGTAGGCTTTTAC 58.041 41.667 0.00 0.00 32.14 2.01
2656 4006 6.786967 ATCGAAAGTAGGAGTAGGCTTTTA 57.213 37.500 0.00 0.00 32.14 1.52
2657 4007 5.678955 ATCGAAAGTAGGAGTAGGCTTTT 57.321 39.130 0.00 0.00 32.14 2.27
2658 4008 5.046520 ACAATCGAAAGTAGGAGTAGGCTTT 60.047 40.000 0.00 0.00 34.34 3.51
2659 4009 4.466726 ACAATCGAAAGTAGGAGTAGGCTT 59.533 41.667 0.00 0.00 0.00 4.35
2660 4010 4.024670 ACAATCGAAAGTAGGAGTAGGCT 58.975 43.478 0.00 0.00 0.00 4.58
2661 4011 4.388378 ACAATCGAAAGTAGGAGTAGGC 57.612 45.455 0.00 0.00 0.00 3.93
2662 4012 6.421202 GCAATACAATCGAAAGTAGGAGTAGG 59.579 42.308 0.00 0.00 0.00 3.18
2663 4013 7.203910 AGCAATACAATCGAAAGTAGGAGTAG 58.796 38.462 0.00 0.00 0.00 2.57
2664 4014 7.108841 AGCAATACAATCGAAAGTAGGAGTA 57.891 36.000 0.00 0.00 0.00 2.59
2665 4015 5.978814 AGCAATACAATCGAAAGTAGGAGT 58.021 37.500 0.00 0.00 0.00 3.85
2666 4016 6.313905 ACAAGCAATACAATCGAAAGTAGGAG 59.686 38.462 0.00 0.00 0.00 3.69
2667 4017 6.092122 CACAAGCAATACAATCGAAAGTAGGA 59.908 38.462 0.00 0.00 0.00 2.94
2668 4018 6.128282 ACACAAGCAATACAATCGAAAGTAGG 60.128 38.462 0.00 0.00 0.00 3.18
2669 4019 6.831769 ACACAAGCAATACAATCGAAAGTAG 58.168 36.000 0.00 0.00 0.00 2.57
2670 4020 6.795098 ACACAAGCAATACAATCGAAAGTA 57.205 33.333 0.00 0.00 0.00 2.24
2671 4021 5.689383 ACACAAGCAATACAATCGAAAGT 57.311 34.783 0.00 0.00 0.00 2.66
2672 4022 6.183359 CGAAACACAAGCAATACAATCGAAAG 60.183 38.462 0.00 0.00 0.00 2.62
2673 4023 5.623264 CGAAACACAAGCAATACAATCGAAA 59.377 36.000 0.00 0.00 0.00 3.46
2674 4024 5.050023 TCGAAACACAAGCAATACAATCGAA 60.050 36.000 0.00 0.00 33.29 3.71
2675 4025 4.449405 TCGAAACACAAGCAATACAATCGA 59.551 37.500 0.00 0.00 33.74 3.59
2676 4026 4.707563 TCGAAACACAAGCAATACAATCG 58.292 39.130 0.00 0.00 0.00 3.34
2677 4027 7.218204 GGTAATCGAAACACAAGCAATACAATC 59.782 37.037 0.00 0.00 0.00 2.67
2678 4028 7.027161 GGTAATCGAAACACAAGCAATACAAT 58.973 34.615 0.00 0.00 0.00 2.71
2679 4029 6.017026 TGGTAATCGAAACACAAGCAATACAA 60.017 34.615 0.00 0.00 0.00 2.41
2680 4030 5.470437 TGGTAATCGAAACACAAGCAATACA 59.530 36.000 0.00 0.00 0.00 2.29
2681 4031 5.933790 TGGTAATCGAAACACAAGCAATAC 58.066 37.500 0.00 0.00 0.00 1.89
2682 4032 5.123186 CCTGGTAATCGAAACACAAGCAATA 59.877 40.000 0.00 0.00 0.00 1.90
2683 4033 4.082787 CCTGGTAATCGAAACACAAGCAAT 60.083 41.667 0.00 0.00 0.00 3.56
2684 4034 3.252215 CCTGGTAATCGAAACACAAGCAA 59.748 43.478 0.00 0.00 0.00 3.91
2685 4035 2.811431 CCTGGTAATCGAAACACAAGCA 59.189 45.455 0.00 0.00 0.00 3.91
2686 4036 2.161609 CCCTGGTAATCGAAACACAAGC 59.838 50.000 0.00 0.00 0.00 4.01
2687 4037 3.670625 TCCCTGGTAATCGAAACACAAG 58.329 45.455 0.00 0.00 0.00 3.16
2688 4038 3.670625 CTCCCTGGTAATCGAAACACAA 58.329 45.455 0.00 0.00 0.00 3.33
2689 4039 2.614481 GCTCCCTGGTAATCGAAACACA 60.614 50.000 0.00 0.00 0.00 3.72
2690 4040 2.007608 GCTCCCTGGTAATCGAAACAC 58.992 52.381 0.00 0.00 0.00 3.32
2691 4041 1.404986 CGCTCCCTGGTAATCGAAACA 60.405 52.381 0.00 0.00 0.00 2.83
2692 4042 1.134907 TCGCTCCCTGGTAATCGAAAC 60.135 52.381 0.00 0.00 0.00 2.78
2693 4043 1.187974 TCGCTCCCTGGTAATCGAAA 58.812 50.000 0.00 0.00 0.00 3.46
2694 4044 1.187974 TTCGCTCCCTGGTAATCGAA 58.812 50.000 0.00 0.00 34.22 3.71
2695 4045 1.410004 ATTCGCTCCCTGGTAATCGA 58.590 50.000 0.00 0.00 0.00 3.59
2696 4046 2.673833 GTATTCGCTCCCTGGTAATCG 58.326 52.381 0.00 0.00 0.00 3.34
2697 4047 2.673833 CGTATTCGCTCCCTGGTAATC 58.326 52.381 0.00 0.00 0.00 1.75
2698 4048 2.814280 CGTATTCGCTCCCTGGTAAT 57.186 50.000 0.00 0.00 0.00 1.89
2710 4060 1.852895 GCACTAGGTCAAGCGTATTCG 59.147 52.381 0.00 0.00 40.37 3.34
2711 4061 3.117046 GAGCACTAGGTCAAGCGTATTC 58.883 50.000 0.00 0.00 41.81 1.75
2712 4062 2.479730 CGAGCACTAGGTCAAGCGTATT 60.480 50.000 0.00 0.00 42.32 1.89
2713 4063 1.065701 CGAGCACTAGGTCAAGCGTAT 59.934 52.381 0.00 0.00 42.32 3.06
2714 4064 0.450583 CGAGCACTAGGTCAAGCGTA 59.549 55.000 0.00 0.00 42.32 4.42
2715 4065 1.213013 CGAGCACTAGGTCAAGCGT 59.787 57.895 0.00 0.00 42.32 5.07
2716 4066 0.101399 ATCGAGCACTAGGTCAAGCG 59.899 55.000 0.00 0.00 42.32 4.68
2717 4067 1.135139 TGATCGAGCACTAGGTCAAGC 59.865 52.381 0.00 0.00 42.32 4.01
2718 4068 3.510388 TTGATCGAGCACTAGGTCAAG 57.490 47.619 1.08 0.00 42.32 3.02
2719 4069 4.471904 AATTGATCGAGCACTAGGTCAA 57.528 40.909 1.08 8.60 42.32 3.18
2720 4070 5.791336 ATAATTGATCGAGCACTAGGTCA 57.209 39.130 1.08 0.00 42.32 4.02
2721 4071 6.926272 AGAAATAATTGATCGAGCACTAGGTC 59.074 38.462 1.08 0.00 38.87 3.85
2722 4072 6.821388 AGAAATAATTGATCGAGCACTAGGT 58.179 36.000 1.08 0.00 0.00 3.08
2723 4073 7.439356 TCAAGAAATAATTGATCGAGCACTAGG 59.561 37.037 1.08 0.00 31.86 3.02
2724 4074 8.357796 TCAAGAAATAATTGATCGAGCACTAG 57.642 34.615 1.08 0.00 31.86 2.57
2725 4075 7.981789 ACTCAAGAAATAATTGATCGAGCACTA 59.018 33.333 1.08 0.00 36.16 2.74
2726 4076 6.820656 ACTCAAGAAATAATTGATCGAGCACT 59.179 34.615 1.08 0.00 36.16 4.40
2727 4077 7.009568 ACTCAAGAAATAATTGATCGAGCAC 57.990 36.000 1.08 0.00 36.16 4.40
2728 4078 7.615582 AACTCAAGAAATAATTGATCGAGCA 57.384 32.000 0.00 0.00 36.16 4.26
2729 4079 9.427127 GTTAACTCAAGAAATAATTGATCGAGC 57.573 33.333 0.00 0.00 36.16 5.03
2730 4080 9.922305 GGTTAACTCAAGAAATAATTGATCGAG 57.078 33.333 5.42 0.00 36.16 4.04
2731 4081 8.889717 GGGTTAACTCAAGAAATAATTGATCGA 58.110 33.333 5.42 0.00 36.16 3.59
2732 4082 8.673711 TGGGTTAACTCAAGAAATAATTGATCG 58.326 33.333 5.47 0.00 36.16 3.69
2733 4083 9.788960 GTGGGTTAACTCAAGAAATAATTGATC 57.211 33.333 10.42 0.00 36.16 2.92
2734 4084 8.749354 GGTGGGTTAACTCAAGAAATAATTGAT 58.251 33.333 10.42 0.00 36.16 2.57
2735 4085 7.094549 CGGTGGGTTAACTCAAGAAATAATTGA 60.095 37.037 10.42 0.00 35.45 2.57
2736 4086 7.027161 CGGTGGGTTAACTCAAGAAATAATTG 58.973 38.462 10.42 0.00 0.00 2.32
2737 4087 6.349860 GCGGTGGGTTAACTCAAGAAATAATT 60.350 38.462 10.42 0.00 0.00 1.40
2738 4088 5.124936 GCGGTGGGTTAACTCAAGAAATAAT 59.875 40.000 10.42 0.00 0.00 1.28
2739 4089 4.456566 GCGGTGGGTTAACTCAAGAAATAA 59.543 41.667 10.42 0.00 0.00 1.40
2740 4090 4.004982 GCGGTGGGTTAACTCAAGAAATA 58.995 43.478 10.42 0.00 0.00 1.40
2741 4091 2.817844 GCGGTGGGTTAACTCAAGAAAT 59.182 45.455 10.42 0.00 0.00 2.17
2742 4092 2.223745 GCGGTGGGTTAACTCAAGAAA 58.776 47.619 10.42 0.00 0.00 2.52
2743 4093 1.543871 GGCGGTGGGTTAACTCAAGAA 60.544 52.381 10.42 0.00 0.00 2.52
2744 4094 0.035739 GGCGGTGGGTTAACTCAAGA 59.964 55.000 10.42 0.00 0.00 3.02
2745 4095 0.958876 GGGCGGTGGGTTAACTCAAG 60.959 60.000 10.42 8.74 0.00 3.02
2746 4096 1.073548 GGGCGGTGGGTTAACTCAA 59.926 57.895 10.42 0.00 0.00 3.02
2747 4097 2.751688 GGGCGGTGGGTTAACTCA 59.248 61.111 3.38 3.38 0.00 3.41
2748 4098 2.435410 CGGGCGGTGGGTTAACTC 60.435 66.667 5.42 1.05 0.00 3.01
2749 4099 4.024545 CCGGGCGGTGGGTTAACT 62.025 66.667 5.42 0.00 0.00 2.24
2759 4109 1.968050 ATAAAGGTGAGACCGGGCGG 61.968 60.000 6.32 0.00 44.90 6.13
2760 4110 0.748450 TATAAAGGTGAGACCGGGCG 59.252 55.000 6.32 0.00 44.90 6.13
2761 4111 3.322828 TGTATATAAAGGTGAGACCGGGC 59.677 47.826 6.32 0.52 44.90 6.13
2762 4112 4.342951 TGTGTATATAAAGGTGAGACCGGG 59.657 45.833 6.32 0.00 44.90 5.73
2763 4113 5.509163 CCTGTGTATATAAAGGTGAGACCGG 60.509 48.000 0.00 0.00 44.90 5.28
2764 4114 5.068723 ACCTGTGTATATAAAGGTGAGACCG 59.931 44.000 10.43 0.00 44.90 4.79
2765 4115 6.481434 ACCTGTGTATATAAAGGTGAGACC 57.519 41.667 10.43 0.00 41.52 3.85
2766 4116 7.553334 TCAACCTGTGTATATAAAGGTGAGAC 58.447 38.462 11.85 0.00 42.25 3.36
2767 4117 7.147724 CCTCAACCTGTGTATATAAAGGTGAGA 60.148 40.741 24.27 18.49 42.25 3.27
2768 4118 6.986817 CCTCAACCTGTGTATATAAAGGTGAG 59.013 42.308 19.96 19.96 42.25 3.51
2769 4119 6.631766 GCCTCAACCTGTGTATATAAAGGTGA 60.632 42.308 11.85 10.26 42.25 4.02
2770 4120 5.527582 GCCTCAACCTGTGTATATAAAGGTG 59.472 44.000 11.85 6.94 42.25 4.00
2771 4121 5.397559 GGCCTCAACCTGTGTATATAAAGGT 60.398 44.000 5.53 5.53 45.01 3.50
2772 4122 5.063880 GGCCTCAACCTGTGTATATAAAGG 58.936 45.833 4.18 4.18 35.82 3.11
2773 4123 5.930135 AGGCCTCAACCTGTGTATATAAAG 58.070 41.667 0.00 0.00 39.13 1.85
2774 4124 5.452776 CGAGGCCTCAACCTGTGTATATAAA 60.453 44.000 31.67 0.00 41.32 1.40
2775 4125 4.038763 CGAGGCCTCAACCTGTGTATATAA 59.961 45.833 31.67 0.00 41.32 0.98
2776 4126 3.572682 CGAGGCCTCAACCTGTGTATATA 59.427 47.826 31.67 0.00 41.32 0.86
2777 4127 2.365617 CGAGGCCTCAACCTGTGTATAT 59.634 50.000 31.67 0.00 41.32 0.86
2778 4128 1.754803 CGAGGCCTCAACCTGTGTATA 59.245 52.381 31.67 0.00 41.32 1.47
2779 4129 0.537188 CGAGGCCTCAACCTGTGTAT 59.463 55.000 31.67 0.00 41.32 2.29
2780 4130 1.972198 CGAGGCCTCAACCTGTGTA 59.028 57.895 31.67 0.00 41.32 2.90
2781 4131 2.743718 CGAGGCCTCAACCTGTGT 59.256 61.111 31.67 0.00 41.32 3.72
2782 4132 2.743928 GCGAGGCCTCAACCTGTG 60.744 66.667 31.67 14.82 41.32 3.66
2783 4133 3.241530 TGCGAGGCCTCAACCTGT 61.242 61.111 31.67 0.00 41.32 4.00
2784 4134 2.435586 CTGCGAGGCCTCAACCTG 60.436 66.667 31.67 16.29 41.32 4.00
2785 4135 4.400961 GCTGCGAGGCCTCAACCT 62.401 66.667 31.67 0.00 45.04 3.50
2786 4136 2.521958 TAAGCTGCGAGGCCTCAACC 62.522 60.000 31.67 19.05 0.00 3.77
2787 4137 1.079127 TAAGCTGCGAGGCCTCAAC 60.079 57.895 31.67 22.77 0.00 3.18
2788 4138 1.079127 GTAAGCTGCGAGGCCTCAA 60.079 57.895 31.67 18.31 0.00 3.02
2789 4139 2.579201 GTAAGCTGCGAGGCCTCA 59.421 61.111 31.67 13.79 0.00 3.86
2790 4140 2.558554 TTCGTAAGCTGCGAGGCCTC 62.559 60.000 23.79 23.79 39.61 4.70
2791 4141 2.564553 CTTCGTAAGCTGCGAGGCCT 62.565 60.000 3.86 3.86 39.61 5.19
2792 4142 2.125673 TTCGTAAGCTGCGAGGCC 60.126 61.111 12.36 0.00 39.61 5.19
2793 4143 1.414527 GACTTCGTAAGCTGCGAGGC 61.415 60.000 18.34 10.20 38.70 4.70
2794 4144 0.802607 GGACTTCGTAAGCTGCGAGG 60.803 60.000 17.30 17.30 39.61 4.63
2795 4145 1.134530 CGGACTTCGTAAGCTGCGAG 61.135 60.000 12.36 9.89 39.61 5.03
2796 4146 1.154093 CGGACTTCGTAAGCTGCGA 60.154 57.895 9.22 9.22 36.51 5.10
2797 4147 2.158959 CCGGACTTCGTAAGCTGCG 61.159 63.158 0.00 4.76 37.11 5.18
2798 4148 2.453638 GCCGGACTTCGTAAGCTGC 61.454 63.158 5.05 0.00 37.11 5.25
2799 4149 1.810030 GGCCGGACTTCGTAAGCTG 60.810 63.158 5.05 0.00 37.11 4.24
2800 4150 2.577593 GGCCGGACTTCGTAAGCT 59.422 61.111 5.05 0.00 37.11 3.74
2801 4151 2.884207 CGGCCGGACTTCGTAAGC 60.884 66.667 20.10 0.00 37.11 3.09
2802 4152 2.202703 CCGGCCGGACTTCGTAAG 60.203 66.667 41.82 7.45 37.50 2.34
2812 4162 3.656045 GTTGTGTGAACCGGCCGG 61.656 66.667 42.17 42.17 42.03 6.13
2813 4163 4.007940 CGTTGTGTGAACCGGCCG 62.008 66.667 21.04 21.04 0.00 6.13
2814 4164 2.898343 ACGTTGTGTGAACCGGCC 60.898 61.111 0.00 0.00 0.00 6.13
2829 4179 2.978489 GTTAGAAACCGAGTCAGTCACG 59.022 50.000 0.00 0.00 0.00 4.35
2833 4183 4.117685 GTGTTGTTAGAAACCGAGTCAGT 58.882 43.478 0.00 0.00 0.00 3.41
2837 4187 3.311596 GCAAGTGTTGTTAGAAACCGAGT 59.688 43.478 0.00 0.00 0.00 4.18
2838 4188 3.303791 GGCAAGTGTTGTTAGAAACCGAG 60.304 47.826 0.00 0.00 0.00 4.63
2839 4189 2.614983 GGCAAGTGTTGTTAGAAACCGA 59.385 45.455 0.00 0.00 0.00 4.69
2844 4194 5.676552 TCTGTAAGGCAAGTGTTGTTAGAA 58.323 37.500 0.00 0.00 0.00 2.10
2847 4197 5.186942 TGTTCTGTAAGGCAAGTGTTGTTA 58.813 37.500 0.00 0.00 0.00 2.41
2848 4198 4.013728 TGTTCTGTAAGGCAAGTGTTGTT 58.986 39.130 0.00 0.00 0.00 2.83
2849 4199 3.616219 TGTTCTGTAAGGCAAGTGTTGT 58.384 40.909 0.00 0.00 0.00 3.32
2851 4201 4.900635 CTTGTTCTGTAAGGCAAGTGTT 57.099 40.909 0.00 0.00 40.12 3.32
2856 4206 6.761099 TGTTTAACTTGTTCTGTAAGGCAA 57.239 33.333 0.00 0.00 0.00 4.52
2859 4209 7.968405 GCCATATGTTTAACTTGTTCTGTAAGG 59.032 37.037 1.24 0.00 0.00 2.69
2861 4211 7.361371 CCGCCATATGTTTAACTTGTTCTGTAA 60.361 37.037 1.24 0.00 0.00 2.41
2862 4212 6.092944 CCGCCATATGTTTAACTTGTTCTGTA 59.907 38.462 1.24 0.00 0.00 2.74
2863 4213 5.106317 CCGCCATATGTTTAACTTGTTCTGT 60.106 40.000 1.24 0.00 0.00 3.41
2864 4214 5.331902 CCGCCATATGTTTAACTTGTTCTG 58.668 41.667 1.24 0.00 0.00 3.02
2865 4215 4.142469 GCCGCCATATGTTTAACTTGTTCT 60.142 41.667 1.24 0.00 0.00 3.01
2867 4217 3.761752 AGCCGCCATATGTTTAACTTGTT 59.238 39.130 1.24 0.00 0.00 2.83
2869 4219 3.376859 TGAGCCGCCATATGTTTAACTTG 59.623 43.478 1.24 0.00 0.00 3.16
2870 4220 3.616219 TGAGCCGCCATATGTTTAACTT 58.384 40.909 1.24 0.00 0.00 2.66
2871 4221 3.275617 TGAGCCGCCATATGTTTAACT 57.724 42.857 1.24 0.00 0.00 2.24
2872 4222 3.058224 GGATGAGCCGCCATATGTTTAAC 60.058 47.826 1.24 0.00 0.00 2.01
2873 4223 3.146066 GGATGAGCCGCCATATGTTTAA 58.854 45.455 1.24 0.00 0.00 1.52
2874 4224 2.552155 GGGATGAGCCGCCATATGTTTA 60.552 50.000 1.24 0.00 37.63 2.01
2875 4225 1.609208 GGATGAGCCGCCATATGTTT 58.391 50.000 1.24 0.00 0.00 2.83
2876 4226 0.250901 GGGATGAGCCGCCATATGTT 60.251 55.000 1.24 0.00 37.63 2.71
2877 4227 1.130054 AGGGATGAGCCGCCATATGT 61.130 55.000 1.24 0.00 37.63 2.29
2878 4228 0.037303 AAGGGATGAGCCGCCATATG 59.963 55.000 0.00 0.00 37.63 1.78
2880 4230 0.179020 CAAAGGGATGAGCCGCCATA 60.179 55.000 0.00 0.00 37.63 2.74
2881 4231 1.454479 CAAAGGGATGAGCCGCCAT 60.454 57.895 0.00 0.00 37.63 4.40
2883 4233 2.830370 CCAAAGGGATGAGCCGCC 60.830 66.667 0.00 0.00 37.63 6.13
2894 4244 0.895559 GGTGACTTGAGGCCCAAAGG 60.896 60.000 17.06 6.00 33.76 3.11
2896 4246 0.110486 GAGGTGACTTGAGGCCCAAA 59.890 55.000 0.00 0.00 44.43 3.28
2898 4248 2.224159 GGAGGTGACTTGAGGCCCA 61.224 63.158 0.00 0.00 44.43 5.36
2899 4249 2.671682 GGAGGTGACTTGAGGCCC 59.328 66.667 0.00 0.00 44.43 5.80
2900 4250 2.266055 CGGAGGTGACTTGAGGCC 59.734 66.667 0.00 0.00 44.43 5.19
2913 4263 3.330720 AAGGCCCAAGACCCGGAG 61.331 66.667 0.73 0.00 0.00 4.63
2915 4265 2.499303 ATTGAAGGCCCAAGACCCGG 62.499 60.000 0.00 0.00 0.00 5.73
2916 4266 0.254747 TATTGAAGGCCCAAGACCCG 59.745 55.000 0.00 0.00 0.00 5.28
2917 4267 2.379005 CTTATTGAAGGCCCAAGACCC 58.621 52.381 0.00 0.00 0.00 4.46
2918 4268 1.751351 GCTTATTGAAGGCCCAAGACC 59.249 52.381 0.00 0.00 32.84 3.85
2919 4269 2.728007 AGCTTATTGAAGGCCCAAGAC 58.272 47.619 0.00 0.00 32.84 3.01
2920 4270 3.091545 CAAGCTTATTGAAGGCCCAAGA 58.908 45.455 0.00 0.00 32.84 3.02
2921 4271 2.417787 GCAAGCTTATTGAAGGCCCAAG 60.418 50.000 0.00 0.00 32.84 3.61
2922 4272 1.550072 GCAAGCTTATTGAAGGCCCAA 59.450 47.619 0.00 0.00 32.84 4.12
2923 4273 1.185315 GCAAGCTTATTGAAGGCCCA 58.815 50.000 0.00 0.00 32.84 5.36
2924 4274 1.478631 AGCAAGCTTATTGAAGGCCC 58.521 50.000 0.00 0.00 32.84 5.80
2925 4275 3.599730 AAAGCAAGCTTATTGAAGGCC 57.400 42.857 7.85 0.00 34.84 5.19
2926 4276 5.894807 TCATAAAGCAAGCTTATTGAAGGC 58.105 37.500 7.85 0.00 34.84 4.35
2927 4277 6.753744 GGTTCATAAAGCAAGCTTATTGAAGG 59.246 38.462 22.19 6.17 37.54 3.46
2928 4278 6.470235 CGGTTCATAAAGCAAGCTTATTGAAG 59.530 38.462 22.19 13.62 37.54 3.02
2929 4279 6.321717 CGGTTCATAAAGCAAGCTTATTGAA 58.678 36.000 19.72 19.72 36.05 2.69
2930 4280 5.676079 GCGGTTCATAAAGCAAGCTTATTGA 60.676 40.000 7.85 10.85 34.84 2.57
2931 4281 4.500477 GCGGTTCATAAAGCAAGCTTATTG 59.500 41.667 7.85 8.80 34.84 1.90
2932 4282 4.440112 GGCGGTTCATAAAGCAAGCTTATT 60.440 41.667 7.85 0.00 34.84 1.40
2933 4283 3.066760 GGCGGTTCATAAAGCAAGCTTAT 59.933 43.478 7.85 1.78 34.84 1.73
2934 4284 2.422127 GGCGGTTCATAAAGCAAGCTTA 59.578 45.455 7.85 0.00 34.84 3.09
2935 4285 1.202348 GGCGGTTCATAAAGCAAGCTT 59.798 47.619 0.59 0.59 37.98 3.74
2936 4286 0.811281 GGCGGTTCATAAAGCAAGCT 59.189 50.000 0.00 0.00 33.03 3.74
2937 4287 0.525761 TGGCGGTTCATAAAGCAAGC 59.474 50.000 0.00 0.00 33.03 4.01
2938 4288 2.684881 AGATGGCGGTTCATAAAGCAAG 59.315 45.455 0.00 0.00 33.03 4.01
2939 4289 2.722094 AGATGGCGGTTCATAAAGCAA 58.278 42.857 0.00 0.00 33.03 3.91
2940 4290 2.418368 AGATGGCGGTTCATAAAGCA 57.582 45.000 0.00 0.00 33.03 3.91
2941 4291 2.682856 TGAAGATGGCGGTTCATAAAGC 59.317 45.455 0.00 0.00 0.00 3.51
2942 4292 6.652481 AGATATGAAGATGGCGGTTCATAAAG 59.348 38.462 15.61 0.00 44.71 1.85
2943 4293 6.533730 AGATATGAAGATGGCGGTTCATAAA 58.466 36.000 15.61 2.30 44.71 1.40
2944 4294 6.114187 AGATATGAAGATGGCGGTTCATAA 57.886 37.500 15.61 4.92 44.71 1.90
2945 4295 5.745312 AGATATGAAGATGGCGGTTCATA 57.255 39.130 14.57 14.57 45.29 2.15
2946 4296 4.630644 AGATATGAAGATGGCGGTTCAT 57.369 40.909 11.88 11.88 44.00 2.57
2947 4297 4.101585 AGAAGATATGAAGATGGCGGTTCA 59.898 41.667 0.00 0.00 37.10 3.18
2948 4298 4.636249 AGAAGATATGAAGATGGCGGTTC 58.364 43.478 0.00 0.00 0.00 3.62
2949 4299 4.696479 AGAAGATATGAAGATGGCGGTT 57.304 40.909 0.00 0.00 0.00 4.44
2950 4300 4.696479 AAGAAGATATGAAGATGGCGGT 57.304 40.909 0.00 0.00 0.00 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.