Multiple sequence alignment - TraesCS3B01G445900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G445900 chr3B 100.000 3125 0 0 1 3125 685392542 685395666 0.000000e+00 5771.0
1 TraesCS3B01G445900 chr3B 93.946 892 45 6 1389 2272 684638628 684637738 0.000000e+00 1339.0
2 TraesCS3B01G445900 chr3B 85.554 1336 127 26 958 2265 684514036 684512739 0.000000e+00 1338.0
3 TraesCS3B01G445900 chr3B 84.702 889 72 27 2271 3123 684512806 684511946 0.000000e+00 830.0
4 TraesCS3B01G445900 chr3B 93.612 407 18 2 2271 2676 684637811 684637412 4.460000e-168 601.0
5 TraesCS3B01G445900 chr3B 87.464 351 22 13 2705 3033 684637412 684637062 4.890000e-103 385.0
6 TraesCS3B01G445900 chr3B 79.481 424 64 13 2271 2689 773881931 773881526 2.370000e-71 279.0
7 TraesCS3B01G445900 chr3B 95.732 164 7 0 1217 1380 684638848 684638685 6.650000e-67 265.0
8 TraesCS3B01G445900 chr3B 96.250 80 3 0 2265 2344 685394734 685394813 7.030000e-27 132.0
9 TraesCS3B01G445900 chr3B 96.250 80 3 0 2193 2272 685394806 685394885 7.030000e-27 132.0
10 TraesCS3B01G445900 chr3B 90.541 74 7 0 231 304 685399971 685400044 7.130000e-17 99.0
11 TraesCS3B01G445900 chr3B 93.478 46 3 0 2362 2407 752225665 752225620 5.590000e-08 69.4
12 TraesCS3B01G445900 chr3B 93.478 46 3 0 2362 2407 752262520 752262475 5.590000e-08 69.4
13 TraesCS3B01G445900 chr3D 94.348 1557 63 9 799 2344 520426389 520427931 0.000000e+00 2364.0
14 TraesCS3B01G445900 chr3D 88.245 1174 107 18 1127 2272 520097641 520096471 0.000000e+00 1375.0
15 TraesCS3B01G445900 chr3D 89.512 963 64 15 2193 3125 520427852 520428807 0.000000e+00 1184.0
16 TraesCS3B01G445900 chr3D 88.099 563 54 9 2271 2822 520096545 520095985 0.000000e+00 656.0
17 TraesCS3B01G445900 chr3D 76.127 1131 202 36 1030 2126 569119529 569118433 5.930000e-147 531.0
18 TraesCS3B01G445900 chr3D 73.244 1125 228 50 1040 2125 520595042 520596132 2.980000e-90 342.0
19 TraesCS3B01G445900 chr3D 86.817 311 29 9 2823 3125 520082573 520082267 1.390000e-88 337.0
20 TraesCS3B01G445900 chr3D 74.194 744 156 24 1398 2126 567371296 567372018 8.540000e-71 278.0
21 TraesCS3B01G445900 chr3D 90.909 187 17 0 1030 1216 568234942 568235128 5.170000e-63 252.0
22 TraesCS3B01G445900 chr3D 90.476 189 18 0 1030 1218 567664773 567664585 1.860000e-62 250.0
23 TraesCS3B01G445900 chr3D 85.470 234 23 4 694 916 520151936 520151703 1.870000e-57 233.0
24 TraesCS3B01G445900 chr3D 97.500 80 2 0 2265 2344 520427780 520427859 1.510000e-28 137.0
25 TraesCS3B01G445900 chr3D 97.500 80 2 0 2193 2272 520427924 520428003 1.510000e-28 137.0
26 TraesCS3B01G445900 chr3D 86.239 109 13 2 2477 2584 566910217 566910110 1.970000e-22 117.0
27 TraesCS3B01G445900 chr3D 81.132 106 18 2 1626 1730 566629132 566629236 2.000000e-12 84.2
28 TraesCS3B01G445900 chr3A 87.751 1445 123 32 868 2272 655570771 655569341 0.000000e+00 1639.0
29 TraesCS3B01G445900 chr3A 86.584 887 82 16 2271 3125 655569415 655568534 0.000000e+00 944.0
30 TraesCS3B01G445900 chr3A 76.237 1132 214 37 1025 2118 700739294 700740408 1.640000e-152 549.0
31 TraesCS3B01G445900 chr3A 75.867 750 153 19 1397 2126 701643802 701644543 1.070000e-94 357.0
32 TraesCS3B01G445900 chr3A 74.379 523 103 24 1629 2130 157044404 157043892 8.840000e-46 195.0
33 TraesCS3B01G445900 chr3A 81.857 237 17 7 445 656 655571363 655571128 3.200000e-40 176.0
34 TraesCS3B01G445900 chr3A 80.488 246 25 12 655 898 655571069 655570845 1.930000e-37 167.0
35 TraesCS3B01G445900 chr3A 78.636 220 31 7 2843 3049 702387803 702387587 7.030000e-27 132.0
36 TraesCS3B01G445900 chr3A 78.636 220 31 7 2843 3049 702405430 702405214 7.030000e-27 132.0
37 TraesCS3B01G445900 chr3A 82.143 112 20 0 1398 1509 701369634 701369745 2.570000e-16 97.1
38 TraesCS3B01G445900 chr3A 92.157 51 4 0 2830 2880 157040526 157040476 4.320000e-09 73.1
39 TraesCS3B01G445900 chrUn 76.786 1120 198 42 1027 2118 287633319 287634404 3.500000e-159 571.0
40 TraesCS3B01G445900 chrUn 73.294 1011 190 42 1152 2129 41197522 41196559 6.550000e-77 298.0
41 TraesCS3B01G445900 chrUn 78.636 220 31 7 2843 3049 333756220 333756004 7.030000e-27 132.0
42 TraesCS3B01G445900 chrUn 80.198 101 14 5 1632 1729 284162664 284162567 1.550000e-08 71.3
43 TraesCS3B01G445900 chr2A 75.423 769 157 19 1525 2269 45073218 45073978 8.300000e-91 344.0
44 TraesCS3B01G445900 chr6A 72.609 460 103 16 1652 2107 617040112 617040552 2.530000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G445900 chr3B 685392542 685395666 3124 False 2011.666667 5771 97.5000 1 3125 3 chr3B.!!$F2 3124
1 TraesCS3B01G445900 chr3B 684511946 684514036 2090 True 1084.000000 1338 85.1280 958 3123 2 chr3B.!!$R4 2165
2 TraesCS3B01G445900 chr3B 684637062 684638848 1786 True 647.500000 1339 92.6885 1217 3033 4 chr3B.!!$R5 1816
3 TraesCS3B01G445900 chr3D 520095985 520097641 1656 True 1015.500000 1375 88.1720 1127 2822 2 chr3D.!!$R6 1695
4 TraesCS3B01G445900 chr3D 520426389 520428807 2418 False 955.500000 2364 94.7150 799 3125 4 chr3D.!!$F5 2326
5 TraesCS3B01G445900 chr3D 569118433 569119529 1096 True 531.000000 531 76.1270 1030 2126 1 chr3D.!!$R5 1096
6 TraesCS3B01G445900 chr3D 520595042 520596132 1090 False 342.000000 342 73.2440 1040 2125 1 chr3D.!!$F1 1085
7 TraesCS3B01G445900 chr3D 567371296 567372018 722 False 278.000000 278 74.1940 1398 2126 1 chr3D.!!$F3 728
8 TraesCS3B01G445900 chr3A 655568534 655571363 2829 True 731.500000 1639 84.1700 445 3125 4 chr3A.!!$R4 2680
9 TraesCS3B01G445900 chr3A 700739294 700740408 1114 False 549.000000 549 76.2370 1025 2118 1 chr3A.!!$F1 1093
10 TraesCS3B01G445900 chr3A 701643802 701644543 741 False 357.000000 357 75.8670 1397 2126 1 chr3A.!!$F3 729
11 TraesCS3B01G445900 chrUn 287633319 287634404 1085 False 571.000000 571 76.7860 1027 2118 1 chrUn.!!$F1 1091
12 TraesCS3B01G445900 chrUn 41196559 41197522 963 True 298.000000 298 73.2940 1152 2129 1 chrUn.!!$R1 977
13 TraesCS3B01G445900 chr2A 45073218 45073978 760 False 344.000000 344 75.4230 1525 2269 1 chr2A.!!$F1 744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.033504 GAACTTCAGTGCCGGACTCA 59.966 55.0 5.05 0.0 29.75 3.41 F
494 495 0.105401 CTACTTCCTCCCCCTCCCTC 60.105 65.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1836 2162 0.323908 CCCGGTATTTGAAGGCCCAA 60.324 55.000 0.0 0.0 0.00 4.12 R
2190 2534 1.339631 CCGGCTCATAGTGAACCCAAA 60.340 52.381 0.0 0.0 28.91 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 5.852282 TCGAACTGATCAGTATCCAATGA 57.148 39.130 28.10 14.58 41.58 2.57
33 34 6.220726 TCGAACTGATCAGTATCCAATGAA 57.779 37.500 28.10 4.71 41.58 2.57
34 35 6.639563 TCGAACTGATCAGTATCCAATGAAA 58.360 36.000 28.10 3.34 41.58 2.69
35 36 7.102993 TCGAACTGATCAGTATCCAATGAAAA 58.897 34.615 28.10 2.11 41.58 2.29
36 37 7.606073 TCGAACTGATCAGTATCCAATGAAAAA 59.394 33.333 28.10 0.82 41.58 1.94
63 64 8.807667 AAAACATTTCAGACATTAAAGAGCAG 57.192 30.769 0.00 0.00 0.00 4.24
64 65 5.947443 ACATTTCAGACATTAAAGAGCAGC 58.053 37.500 0.00 0.00 0.00 5.25
65 66 5.474532 ACATTTCAGACATTAAAGAGCAGCA 59.525 36.000 0.00 0.00 0.00 4.41
66 67 5.362556 TTTCAGACATTAAAGAGCAGCAC 57.637 39.130 0.00 0.00 0.00 4.40
67 68 4.006780 TCAGACATTAAAGAGCAGCACA 57.993 40.909 0.00 0.00 0.00 4.57
68 69 4.582869 TCAGACATTAAAGAGCAGCACAT 58.417 39.130 0.00 0.00 0.00 3.21
69 70 5.733676 TCAGACATTAAAGAGCAGCACATA 58.266 37.500 0.00 0.00 0.00 2.29
70 71 6.172630 TCAGACATTAAAGAGCAGCACATAA 58.827 36.000 0.00 0.00 0.00 1.90
71 72 6.314648 TCAGACATTAAAGAGCAGCACATAAG 59.685 38.462 0.00 0.00 0.00 1.73
72 73 5.065731 AGACATTAAAGAGCAGCACATAAGC 59.934 40.000 0.00 0.00 0.00 3.09
73 74 4.701651 ACATTAAAGAGCAGCACATAAGCA 59.298 37.500 0.00 0.00 36.85 3.91
74 75 5.183713 ACATTAAAGAGCAGCACATAAGCAA 59.816 36.000 0.00 0.00 36.85 3.91
75 76 3.565905 AAAGAGCAGCACATAAGCAAC 57.434 42.857 0.00 0.00 36.85 4.17
76 77 1.457346 AGAGCAGCACATAAGCAACC 58.543 50.000 0.00 0.00 36.85 3.77
77 78 1.004044 AGAGCAGCACATAAGCAACCT 59.996 47.619 0.00 0.00 36.85 3.50
78 79 1.815003 GAGCAGCACATAAGCAACCTT 59.185 47.619 0.00 0.00 36.85 3.50
79 80 2.229784 GAGCAGCACATAAGCAACCTTT 59.770 45.455 0.00 0.00 36.85 3.11
80 81 2.629617 AGCAGCACATAAGCAACCTTTT 59.370 40.909 0.00 0.00 36.85 2.27
81 82 2.733026 GCAGCACATAAGCAACCTTTTG 59.267 45.455 0.00 0.00 36.47 2.44
82 83 3.799917 GCAGCACATAAGCAACCTTTTGT 60.800 43.478 0.00 0.00 41.79 2.83
83 84 4.370917 CAGCACATAAGCAACCTTTTGTT 58.629 39.130 0.00 0.00 39.98 2.83
84 85 4.810491 CAGCACATAAGCAACCTTTTGTTT 59.190 37.500 0.00 0.00 39.98 2.83
85 86 5.294060 CAGCACATAAGCAACCTTTTGTTTT 59.706 36.000 0.00 0.00 39.98 2.43
86 87 5.294060 AGCACATAAGCAACCTTTTGTTTTG 59.706 36.000 0.00 0.00 39.98 2.44
87 88 5.503846 GCACATAAGCAACCTTTTGTTTTGG 60.504 40.000 0.00 0.00 39.98 3.28
88 89 5.814705 CACATAAGCAACCTTTTGTTTTGGA 59.185 36.000 0.00 0.00 39.98 3.53
89 90 6.018832 CACATAAGCAACCTTTTGTTTTGGAG 60.019 38.462 0.00 0.00 39.98 3.86
90 91 4.551702 AAGCAACCTTTTGTTTTGGAGT 57.448 36.364 0.00 0.00 32.67 3.85
91 92 3.860641 AGCAACCTTTTGTTTTGGAGTG 58.139 40.909 0.00 0.00 34.00 3.51
92 93 2.935849 GCAACCTTTTGTTTTGGAGTGG 59.064 45.455 0.00 0.00 34.00 4.00
93 94 3.618752 GCAACCTTTTGTTTTGGAGTGGT 60.619 43.478 0.00 0.00 34.00 4.16
94 95 3.885724 ACCTTTTGTTTTGGAGTGGTG 57.114 42.857 0.00 0.00 0.00 4.17
95 96 2.093711 ACCTTTTGTTTTGGAGTGGTGC 60.094 45.455 0.00 0.00 0.00 5.01
96 97 2.093764 CCTTTTGTTTTGGAGTGGTGCA 60.094 45.455 0.00 0.00 0.00 4.57
97 98 2.663826 TTTGTTTTGGAGTGGTGCAC 57.336 45.000 8.80 8.80 34.10 4.57
98 99 1.550327 TTGTTTTGGAGTGGTGCACA 58.450 45.000 20.43 1.62 36.74 4.57
143 144 8.948631 ACAGTAACTATGAACTTGATATGGTG 57.051 34.615 0.00 0.00 0.00 4.17
144 145 8.540388 ACAGTAACTATGAACTTGATATGGTGT 58.460 33.333 0.00 0.00 0.00 4.16
145 146 9.383519 CAGTAACTATGAACTTGATATGGTGTT 57.616 33.333 0.00 0.00 0.00 3.32
146 147 9.601217 AGTAACTATGAACTTGATATGGTGTTC 57.399 33.333 0.00 0.00 39.18 3.18
147 148 9.601217 GTAACTATGAACTTGATATGGTGTTCT 57.399 33.333 0.00 0.00 39.38 3.01
153 154 9.988815 ATGAACTTGATATGGTGTTCTATAGTC 57.011 33.333 0.00 0.00 39.38 2.59
154 155 8.421784 TGAACTTGATATGGTGTTCTATAGTCC 58.578 37.037 0.00 0.21 39.38 3.85
155 156 8.554490 AACTTGATATGGTGTTCTATAGTCCT 57.446 34.615 0.00 0.00 0.00 3.85
156 157 7.957002 ACTTGATATGGTGTTCTATAGTCCTG 58.043 38.462 0.00 0.00 0.00 3.86
157 158 6.918067 TGATATGGTGTTCTATAGTCCTGG 57.082 41.667 0.00 0.00 0.00 4.45
158 159 6.620429 TGATATGGTGTTCTATAGTCCTGGA 58.380 40.000 0.00 0.00 0.00 3.86
159 160 6.493802 TGATATGGTGTTCTATAGTCCTGGAC 59.506 42.308 19.20 19.20 0.00 4.02
160 161 4.055710 TGGTGTTCTATAGTCCTGGACA 57.944 45.455 27.48 14.38 34.60 4.02
161 162 3.767673 TGGTGTTCTATAGTCCTGGACAC 59.232 47.826 27.48 16.11 34.60 3.67
162 163 4.024670 GGTGTTCTATAGTCCTGGACACT 58.975 47.826 27.48 16.36 34.60 3.55
163 164 4.142138 GGTGTTCTATAGTCCTGGACACTG 60.142 50.000 27.48 14.46 34.60 3.66
164 165 4.023980 TGTTCTATAGTCCTGGACACTGG 58.976 47.826 27.48 15.78 34.60 4.00
165 166 4.264217 TGTTCTATAGTCCTGGACACTGGA 60.264 45.833 27.48 17.63 41.79 3.86
166 167 4.171878 TCTATAGTCCTGGACACTGGAG 57.828 50.000 27.48 16.18 44.24 3.86
167 168 3.786450 TCTATAGTCCTGGACACTGGAGA 59.214 47.826 27.48 17.93 44.24 3.71
168 169 2.992847 TAGTCCTGGACACTGGAGAA 57.007 50.000 27.48 1.06 44.24 2.87
169 170 2.103153 AGTCCTGGACACTGGAGAAA 57.897 50.000 27.48 0.00 44.24 2.52
170 171 2.408565 AGTCCTGGACACTGGAGAAAA 58.591 47.619 27.48 0.00 44.24 2.29
171 172 2.777692 AGTCCTGGACACTGGAGAAAAA 59.222 45.455 27.48 0.00 44.24 1.94
172 173 3.142174 GTCCTGGACACTGGAGAAAAAG 58.858 50.000 21.70 0.00 44.24 2.27
173 174 1.882623 CCTGGACACTGGAGAAAAAGC 59.117 52.381 0.00 0.00 37.89 3.51
174 175 2.575532 CTGGACACTGGAGAAAAAGCA 58.424 47.619 0.00 0.00 0.00 3.91
175 176 2.951642 CTGGACACTGGAGAAAAAGCAA 59.048 45.455 0.00 0.00 0.00 3.91
176 177 2.687935 TGGACACTGGAGAAAAAGCAAC 59.312 45.455 0.00 0.00 0.00 4.17
177 178 2.952310 GGACACTGGAGAAAAAGCAACT 59.048 45.455 0.00 0.00 0.00 3.16
178 179 3.243201 GGACACTGGAGAAAAAGCAACTG 60.243 47.826 0.00 0.00 0.00 3.16
179 180 2.099756 ACACTGGAGAAAAAGCAACTGC 59.900 45.455 0.00 0.00 42.49 4.40
180 181 2.099592 CACTGGAGAAAAAGCAACTGCA 59.900 45.455 4.22 0.00 45.16 4.41
181 182 2.961062 ACTGGAGAAAAAGCAACTGCAT 59.039 40.909 4.22 0.00 45.16 3.96
182 183 3.243636 ACTGGAGAAAAAGCAACTGCATG 60.244 43.478 4.22 0.00 45.16 4.06
183 184 2.064014 GGAGAAAAAGCAACTGCATGC 58.936 47.619 11.82 11.82 46.78 4.06
206 207 5.614308 CATAACTAATGCATCAGTCCTCCA 58.386 41.667 2.08 0.00 0.00 3.86
207 208 4.785346 AACTAATGCATCAGTCCTCCAT 57.215 40.909 2.08 0.00 0.00 3.41
208 209 4.348863 ACTAATGCATCAGTCCTCCATC 57.651 45.455 0.00 0.00 0.00 3.51
209 210 2.653234 AATGCATCAGTCCTCCATCC 57.347 50.000 0.00 0.00 0.00 3.51
210 211 0.769873 ATGCATCAGTCCTCCATCCC 59.230 55.000 0.00 0.00 0.00 3.85
211 212 0.621280 TGCATCAGTCCTCCATCCCA 60.621 55.000 0.00 0.00 0.00 4.37
212 213 0.769873 GCATCAGTCCTCCATCCCAT 59.230 55.000 0.00 0.00 0.00 4.00
213 214 1.544982 GCATCAGTCCTCCATCCCATG 60.545 57.143 0.00 0.00 0.00 3.66
223 224 3.483954 CATCCCATGGACACTGGAC 57.516 57.895 15.22 0.00 35.70 4.02
224 225 0.620030 CATCCCATGGACACTGGACA 59.380 55.000 15.22 0.00 35.70 4.02
225 226 0.620556 ATCCCATGGACACTGGACAC 59.379 55.000 15.22 0.00 35.70 3.67
226 227 0.473694 TCCCATGGACACTGGACACT 60.474 55.000 15.22 0.00 35.70 3.55
227 228 0.321919 CCCATGGACACTGGACACTG 60.322 60.000 15.22 0.00 35.70 3.66
228 229 0.321919 CCATGGACACTGGACACTGG 60.322 60.000 5.56 0.00 35.70 4.00
229 230 0.686789 CATGGACACTGGACACTGGA 59.313 55.000 0.00 0.00 0.00 3.86
230 231 0.979665 ATGGACACTGGACACTGGAG 59.020 55.000 0.00 0.00 0.00 3.86
231 232 0.105709 TGGACACTGGACACTGGAGA 60.106 55.000 0.00 0.00 0.00 3.71
232 233 1.048601 GGACACTGGACACTGGAGAA 58.951 55.000 0.00 0.00 0.00 2.87
233 234 1.270358 GGACACTGGACACTGGAGAAC 60.270 57.143 0.00 0.00 0.00 3.01
234 235 1.412710 GACACTGGACACTGGAGAACA 59.587 52.381 0.00 0.00 0.00 3.18
235 236 1.837439 ACACTGGACACTGGAGAACAA 59.163 47.619 0.00 0.00 0.00 2.83
236 237 2.158900 ACACTGGACACTGGAGAACAAG 60.159 50.000 0.00 0.00 0.00 3.16
237 238 1.202698 ACTGGACACTGGAGAACAAGC 60.203 52.381 0.00 0.00 0.00 4.01
238 239 0.836606 TGGACACTGGAGAACAAGCA 59.163 50.000 0.00 0.00 0.00 3.91
239 240 1.421268 TGGACACTGGAGAACAAGCAT 59.579 47.619 0.00 0.00 0.00 3.79
240 241 2.637382 TGGACACTGGAGAACAAGCATA 59.363 45.455 0.00 0.00 0.00 3.14
241 242 3.003480 GGACACTGGAGAACAAGCATAC 58.997 50.000 0.00 0.00 0.00 2.39
242 243 3.307059 GGACACTGGAGAACAAGCATACT 60.307 47.826 0.00 0.00 0.00 2.12
243 244 3.668447 ACACTGGAGAACAAGCATACTG 58.332 45.455 0.00 0.00 0.00 2.74
244 245 2.417933 CACTGGAGAACAAGCATACTGC 59.582 50.000 0.00 0.00 45.46 4.40
257 258 4.621068 GCATACTGCAAACTGAATAGCA 57.379 40.909 0.00 0.00 44.26 3.49
258 259 5.179045 GCATACTGCAAACTGAATAGCAT 57.821 39.130 0.00 0.00 44.26 3.79
259 260 4.974275 GCATACTGCAAACTGAATAGCATG 59.026 41.667 0.00 0.00 44.26 4.06
260 261 5.516996 CATACTGCAAACTGAATAGCATGG 58.483 41.667 0.00 0.00 36.28 3.66
261 262 3.689347 ACTGCAAACTGAATAGCATGGA 58.311 40.909 0.00 0.00 36.28 3.41
262 263 4.081406 ACTGCAAACTGAATAGCATGGAA 58.919 39.130 0.00 0.00 36.28 3.53
263 264 4.523943 ACTGCAAACTGAATAGCATGGAAA 59.476 37.500 0.00 0.00 36.28 3.13
264 265 5.186409 ACTGCAAACTGAATAGCATGGAAAT 59.814 36.000 0.00 0.00 36.28 2.17
265 266 6.377996 ACTGCAAACTGAATAGCATGGAAATA 59.622 34.615 0.00 0.00 36.28 1.40
266 267 7.069085 ACTGCAAACTGAATAGCATGGAAATAT 59.931 33.333 0.00 0.00 36.28 1.28
267 268 8.462589 TGCAAACTGAATAGCATGGAAATATA 57.537 30.769 0.00 0.00 31.05 0.86
268 269 8.570488 TGCAAACTGAATAGCATGGAAATATAG 58.430 33.333 0.00 0.00 31.05 1.31
269 270 8.786898 GCAAACTGAATAGCATGGAAATATAGA 58.213 33.333 0.00 0.00 0.00 1.98
271 272 8.539770 AACTGAATAGCATGGAAATATAGACG 57.460 34.615 0.00 0.00 0.00 4.18
272 273 7.099764 ACTGAATAGCATGGAAATATAGACGG 58.900 38.462 0.00 0.00 0.00 4.79
273 274 5.874810 TGAATAGCATGGAAATATAGACGGC 59.125 40.000 0.00 0.00 0.00 5.68
274 275 3.769739 AGCATGGAAATATAGACGGCA 57.230 42.857 0.00 0.00 0.00 5.69
275 276 4.085357 AGCATGGAAATATAGACGGCAA 57.915 40.909 0.00 0.00 0.00 4.52
276 277 4.460263 AGCATGGAAATATAGACGGCAAA 58.540 39.130 0.00 0.00 0.00 3.68
277 278 4.887071 AGCATGGAAATATAGACGGCAAAA 59.113 37.500 0.00 0.00 0.00 2.44
278 279 5.536161 AGCATGGAAATATAGACGGCAAAAT 59.464 36.000 0.00 0.00 0.00 1.82
279 280 6.714810 AGCATGGAAATATAGACGGCAAAATA 59.285 34.615 0.00 0.00 0.00 1.40
280 281 6.801862 GCATGGAAATATAGACGGCAAAATAC 59.198 38.462 0.00 0.00 0.00 1.89
281 282 6.870971 TGGAAATATAGACGGCAAAATACC 57.129 37.500 0.00 0.00 0.00 2.73
282 283 6.358178 TGGAAATATAGACGGCAAAATACCA 58.642 36.000 0.00 0.00 0.00 3.25
283 284 7.001674 TGGAAATATAGACGGCAAAATACCAT 58.998 34.615 0.00 0.00 0.00 3.55
284 285 7.040755 TGGAAATATAGACGGCAAAATACCATG 60.041 37.037 0.00 0.00 0.00 3.66
285 286 7.174253 GGAAATATAGACGGCAAAATACCATGA 59.826 37.037 0.00 0.00 0.00 3.07
286 287 7.435068 AATATAGACGGCAAAATACCATGAC 57.565 36.000 0.00 0.00 0.00 3.06
287 288 3.066291 AGACGGCAAAATACCATGACA 57.934 42.857 0.00 0.00 0.00 3.58
288 289 3.417101 AGACGGCAAAATACCATGACAA 58.583 40.909 0.00 0.00 0.00 3.18
289 290 3.823873 AGACGGCAAAATACCATGACAAA 59.176 39.130 0.00 0.00 0.00 2.83
290 291 4.279671 AGACGGCAAAATACCATGACAAAA 59.720 37.500 0.00 0.00 0.00 2.44
291 292 4.303282 ACGGCAAAATACCATGACAAAAC 58.697 39.130 0.00 0.00 0.00 2.43
292 293 4.202161 ACGGCAAAATACCATGACAAAACA 60.202 37.500 0.00 0.00 0.00 2.83
293 294 4.928615 CGGCAAAATACCATGACAAAACAT 59.071 37.500 0.00 0.00 0.00 2.71
294 295 6.096036 CGGCAAAATACCATGACAAAACATA 58.904 36.000 0.00 0.00 0.00 2.29
295 296 6.587990 CGGCAAAATACCATGACAAAACATAA 59.412 34.615 0.00 0.00 0.00 1.90
296 297 7.116948 CGGCAAAATACCATGACAAAACATAAA 59.883 33.333 0.00 0.00 0.00 1.40
297 298 8.778358 GGCAAAATACCATGACAAAACATAAAA 58.222 29.630 0.00 0.00 0.00 1.52
301 302 9.777297 AAATACCATGACAAAACATAAAAAGCT 57.223 25.926 0.00 0.00 0.00 3.74
305 306 9.855021 ACCATGACAAAACATAAAAAGCTATAC 57.145 29.630 0.00 0.00 0.00 1.47
310 311 9.278734 GACAAAACATAAAAAGCTATACTCAGC 57.721 33.333 0.00 0.00 42.12 4.26
311 312 8.792633 ACAAAACATAAAAAGCTATACTCAGCA 58.207 29.630 0.00 0.00 44.35 4.41
312 313 9.282247 CAAAACATAAAAAGCTATACTCAGCAG 57.718 33.333 0.00 0.00 44.35 4.24
313 314 8.792830 AAACATAAAAAGCTATACTCAGCAGA 57.207 30.769 0.00 0.00 44.35 4.26
314 315 8.792830 AACATAAAAAGCTATACTCAGCAGAA 57.207 30.769 0.00 0.00 44.35 3.02
315 316 8.202745 ACATAAAAAGCTATACTCAGCAGAAC 57.797 34.615 0.00 0.00 44.35 3.01
316 317 8.043710 ACATAAAAAGCTATACTCAGCAGAACT 58.956 33.333 0.00 0.00 44.35 3.01
317 318 8.887717 CATAAAAAGCTATACTCAGCAGAACTT 58.112 33.333 0.00 0.00 44.35 2.66
318 319 6.976636 AAAAGCTATACTCAGCAGAACTTC 57.023 37.500 0.00 0.00 44.35 3.01
319 320 5.667539 AAGCTATACTCAGCAGAACTTCA 57.332 39.130 0.00 0.00 44.35 3.02
320 321 5.261209 AGCTATACTCAGCAGAACTTCAG 57.739 43.478 0.00 0.00 44.35 3.02
321 322 4.709397 AGCTATACTCAGCAGAACTTCAGT 59.291 41.667 0.00 0.00 44.35 3.41
322 323 4.803088 GCTATACTCAGCAGAACTTCAGTG 59.197 45.833 0.00 0.00 41.40 3.66
323 324 1.876322 ACTCAGCAGAACTTCAGTGC 58.124 50.000 0.00 0.00 37.48 4.40
324 325 1.155042 CTCAGCAGAACTTCAGTGCC 58.845 55.000 0.54 0.00 37.98 5.01
325 326 0.601046 TCAGCAGAACTTCAGTGCCG 60.601 55.000 0.54 0.00 37.98 5.69
326 327 1.302033 AGCAGAACTTCAGTGCCGG 60.302 57.895 0.00 0.00 37.98 6.13
327 328 1.301716 GCAGAACTTCAGTGCCGGA 60.302 57.895 5.05 0.00 0.00 5.14
328 329 1.569479 GCAGAACTTCAGTGCCGGAC 61.569 60.000 5.05 0.00 0.00 4.79
329 330 0.034059 CAGAACTTCAGTGCCGGACT 59.966 55.000 5.05 2.62 34.02 3.85
330 331 0.318762 AGAACTTCAGTGCCGGACTC 59.681 55.000 5.05 0.00 29.75 3.36
331 332 0.033504 GAACTTCAGTGCCGGACTCA 59.966 55.000 5.05 0.00 29.75 3.41
332 333 0.468226 AACTTCAGTGCCGGACTCAA 59.532 50.000 5.05 0.00 29.75 3.02
333 334 0.687354 ACTTCAGTGCCGGACTCAAT 59.313 50.000 5.05 0.00 29.75 2.57
334 335 1.072331 ACTTCAGTGCCGGACTCAATT 59.928 47.619 5.05 0.00 29.75 2.32
335 336 1.466167 CTTCAGTGCCGGACTCAATTG 59.534 52.381 5.05 0.00 29.75 2.32
336 337 0.955428 TCAGTGCCGGACTCAATTGC 60.955 55.000 5.05 0.00 29.75 3.56
337 338 1.073025 AGTGCCGGACTCAATTGCA 59.927 52.632 5.05 0.00 0.00 4.08
338 339 0.322816 AGTGCCGGACTCAATTGCAT 60.323 50.000 5.05 0.00 34.04 3.96
339 340 0.527565 GTGCCGGACTCAATTGCATT 59.472 50.000 5.05 0.00 34.04 3.56
340 341 1.742831 GTGCCGGACTCAATTGCATTA 59.257 47.619 5.05 0.00 34.04 1.90
341 342 1.742831 TGCCGGACTCAATTGCATTAC 59.257 47.619 5.05 0.00 0.00 1.89
342 343 1.268032 GCCGGACTCAATTGCATTACG 60.268 52.381 5.05 0.00 0.00 3.18
343 344 2.276201 CCGGACTCAATTGCATTACGA 58.724 47.619 0.00 0.00 0.00 3.43
344 345 2.675844 CCGGACTCAATTGCATTACGAA 59.324 45.455 0.00 0.00 0.00 3.85
345 346 3.126171 CCGGACTCAATTGCATTACGAAA 59.874 43.478 0.00 0.00 0.00 3.46
346 347 4.201910 CCGGACTCAATTGCATTACGAAAT 60.202 41.667 0.00 0.00 0.00 2.17
347 348 5.007234 CCGGACTCAATTGCATTACGAAATA 59.993 40.000 0.00 0.00 0.00 1.40
348 349 5.901884 CGGACTCAATTGCATTACGAAATAC 59.098 40.000 0.00 0.00 0.00 1.89
349 350 6.238103 CGGACTCAATTGCATTACGAAATACT 60.238 38.462 0.00 0.00 0.00 2.12
350 351 7.042992 CGGACTCAATTGCATTACGAAATACTA 60.043 37.037 0.00 0.00 0.00 1.82
351 352 8.062448 GGACTCAATTGCATTACGAAATACTAC 58.938 37.037 0.00 0.00 0.00 2.73
352 353 7.916552 ACTCAATTGCATTACGAAATACTACC 58.083 34.615 0.00 0.00 0.00 3.18
353 354 7.769044 ACTCAATTGCATTACGAAATACTACCT 59.231 33.333 0.00 0.00 0.00 3.08
354 355 8.138365 TCAATTGCATTACGAAATACTACCTC 57.862 34.615 0.00 0.00 0.00 3.85
355 356 7.985184 TCAATTGCATTACGAAATACTACCTCT 59.015 33.333 0.00 0.00 0.00 3.69
356 357 9.256477 CAATTGCATTACGAAATACTACCTCTA 57.744 33.333 0.00 0.00 0.00 2.43
357 358 9.998106 AATTGCATTACGAAATACTACCTCTAT 57.002 29.630 0.00 0.00 0.00 1.98
358 359 9.640963 ATTGCATTACGAAATACTACCTCTATC 57.359 33.333 0.00 0.00 0.00 2.08
359 360 7.600065 TGCATTACGAAATACTACCTCTATCC 58.400 38.462 0.00 0.00 0.00 2.59
360 361 7.034397 GCATTACGAAATACTACCTCTATCCC 58.966 42.308 0.00 0.00 0.00 3.85
361 362 7.309621 GCATTACGAAATACTACCTCTATCCCA 60.310 40.741 0.00 0.00 0.00 4.37
362 363 8.582437 CATTACGAAATACTACCTCTATCCCAA 58.418 37.037 0.00 0.00 0.00 4.12
363 364 8.537728 TTACGAAATACTACCTCTATCCCAAA 57.462 34.615 0.00 0.00 0.00 3.28
364 365 7.613551 ACGAAATACTACCTCTATCCCAAAT 57.386 36.000 0.00 0.00 0.00 2.32
365 366 8.030913 ACGAAATACTACCTCTATCCCAAATT 57.969 34.615 0.00 0.00 0.00 1.82
366 367 9.151177 ACGAAATACTACCTCTATCCCAAATTA 57.849 33.333 0.00 0.00 0.00 1.40
422 423 3.971032 GCGAGTGCTTGCCTTTTATAT 57.029 42.857 0.00 0.00 38.39 0.86
423 424 4.292977 GCGAGTGCTTGCCTTTTATATT 57.707 40.909 0.00 0.00 38.39 1.28
424 425 4.672409 GCGAGTGCTTGCCTTTTATATTT 58.328 39.130 0.00 0.00 38.39 1.40
425 426 5.102313 GCGAGTGCTTGCCTTTTATATTTT 58.898 37.500 0.00 0.00 38.39 1.82
426 427 5.230097 GCGAGTGCTTGCCTTTTATATTTTC 59.770 40.000 0.00 0.00 38.39 2.29
427 428 6.555315 CGAGTGCTTGCCTTTTATATTTTCT 58.445 36.000 0.00 0.00 0.00 2.52
428 429 7.029563 CGAGTGCTTGCCTTTTATATTTTCTT 58.970 34.615 0.00 0.00 0.00 2.52
429 430 8.181573 CGAGTGCTTGCCTTTTATATTTTCTTA 58.818 33.333 0.00 0.00 0.00 2.10
430 431 9.855021 GAGTGCTTGCCTTTTATATTTTCTTAA 57.145 29.630 0.00 0.00 0.00 1.85
462 463 4.572389 CGAATAAGCAAACTAGCCTCACAT 59.428 41.667 0.00 0.00 34.23 3.21
471 472 5.567138 AACTAGCCTCACATGTAAATTGC 57.433 39.130 0.00 0.00 0.00 3.56
472 473 4.588899 ACTAGCCTCACATGTAAATTGCA 58.411 39.130 0.00 0.00 0.00 4.08
473 474 3.855689 AGCCTCACATGTAAATTGCAC 57.144 42.857 0.00 0.00 0.00 4.57
493 494 0.860901 ACTACTTCCTCCCCCTCCCT 60.861 60.000 0.00 0.00 0.00 4.20
494 495 0.105401 CTACTTCCTCCCCCTCCCTC 60.105 65.000 0.00 0.00 0.00 4.30
496 497 1.383803 CTTCCTCCCCCTCCCTCTG 60.384 68.421 0.00 0.00 0.00 3.35
497 498 2.184631 TTCCTCCCCCTCCCTCTGT 61.185 63.158 0.00 0.00 0.00 3.41
500 501 1.275421 CCTCCCCCTCCCTCTGTTTC 61.275 65.000 0.00 0.00 0.00 2.78
503 510 1.076438 CCCCCTCCCTCTGTTTCTTT 58.924 55.000 0.00 0.00 0.00 2.52
515 522 4.074970 TCTGTTTCTTTCATCTTCCCAGC 58.925 43.478 0.00 0.00 0.00 4.85
577 603 3.751175 TGGTGAAAGCTTTCGATTACCTG 59.249 43.478 30.99 0.00 40.01 4.00
603 629 6.401955 GAGCATCTTCACAGTTTTAGTCTC 57.598 41.667 0.00 0.00 0.00 3.36
604 630 6.107901 AGCATCTTCACAGTTTTAGTCTCT 57.892 37.500 0.00 0.00 0.00 3.10
645 671 2.247790 GAGCATCGCACAACCAAGT 58.752 52.632 0.00 0.00 0.00 3.16
646 672 0.166814 GAGCATCGCACAACCAAGTC 59.833 55.000 0.00 0.00 0.00 3.01
647 673 0.534877 AGCATCGCACAACCAAGTCA 60.535 50.000 0.00 0.00 0.00 3.41
648 674 0.110056 GCATCGCACAACCAAGTCAG 60.110 55.000 0.00 0.00 0.00 3.51
650 676 1.603802 CATCGCACAACCAAGTCAGTT 59.396 47.619 0.00 0.00 0.00 3.16
651 677 1.295792 TCGCACAACCAAGTCAGTTC 58.704 50.000 0.00 0.00 0.00 3.01
652 678 1.013596 CGCACAACCAAGTCAGTTCA 58.986 50.000 0.00 0.00 0.00 3.18
653 679 1.003545 CGCACAACCAAGTCAGTTCAG 60.004 52.381 0.00 0.00 0.00 3.02
664 749 1.664649 CAGTTCAGCCGACAAGCGA 60.665 57.895 0.00 0.00 44.57 4.93
665 750 1.016130 CAGTTCAGCCGACAAGCGAT 61.016 55.000 0.00 0.00 44.57 4.58
669 754 1.522355 CAGCCGACAAGCGATCCAT 60.522 57.895 0.00 0.00 44.57 3.41
695 780 2.675423 CCCTCACCGACCTCACGA 60.675 66.667 0.00 0.00 35.09 4.35
706 791 0.540830 ACCTCACGACTGCTCCTCTT 60.541 55.000 0.00 0.00 0.00 2.85
756 841 1.066573 CCCTCGCTGACAGTCATTTCT 60.067 52.381 2.97 0.00 0.00 2.52
764 849 5.566774 CGCTGACAGTCATTTCTTTTCATTC 59.433 40.000 2.97 0.00 0.00 2.67
765 850 5.860716 GCTGACAGTCATTTCTTTTCATTCC 59.139 40.000 2.97 0.00 0.00 3.01
768 854 4.528206 ACAGTCATTTCTTTTCATTCCCCC 59.472 41.667 0.00 0.00 0.00 5.40
781 867 2.375014 TTCCCCCTCGCTTTCTTTTT 57.625 45.000 0.00 0.00 0.00 1.94
805 891 1.161563 ATTCGTCGTTGGTTGCCGTT 61.162 50.000 0.00 0.00 0.00 4.44
827 913 1.152963 ATGGCCCGTGGTATTCAGC 60.153 57.895 0.00 0.00 0.00 4.26
866 952 2.750237 CCCAGCCCGCTTGGTTAC 60.750 66.667 0.00 0.00 36.04 2.50
908 1094 3.207669 CAGCCCGAATGCCTCTGC 61.208 66.667 0.00 0.00 38.26 4.26
987 1184 1.360911 GGAACGGATCGAGAGCTCC 59.639 63.158 10.93 0.68 42.85 4.70
1034 1231 2.284478 AGCAGGAGCAGGAGCAGA 60.284 61.111 0.00 0.00 45.49 4.26
1563 1856 0.994247 ACATCTCCACATTGGGCTCA 59.006 50.000 0.00 0.00 38.32 4.26
1590 1889 1.077716 GCCGAGGCACATAGGGTTT 60.078 57.895 9.58 0.00 41.49 3.27
1836 2162 0.611340 AGGACTACGAAGCCGAGGTT 60.611 55.000 0.00 0.00 39.50 3.50
1920 2249 6.375455 AGTCTGACAATTATTGGAATGTGGTC 59.625 38.462 10.88 0.00 34.12 4.02
2024 2359 1.176619 TCCAGTTTCCGTCGCAGAGA 61.177 55.000 0.00 0.00 36.95 3.10
2190 2534 0.877071 GCGCTGCAATATGTATGCCT 59.123 50.000 0.00 0.00 43.16 4.75
2235 2579 9.202273 GGTTAGTTTCATTTTGATGTATGCAAA 57.798 29.630 0.00 0.00 33.76 3.68
2243 2587 9.955208 TCATTTTGATGTATGCAAACTATGATC 57.045 29.630 0.00 0.00 35.20 2.92
2244 2588 9.738832 CATTTTGATGTATGCAAACTATGATCA 57.261 29.630 0.00 0.00 35.20 2.92
2246 2590 9.791820 TTTTGATGTATGCAAACTATGATCAAG 57.208 29.630 0.00 1.33 35.20 3.02
2247 2591 8.735692 TTGATGTATGCAAACTATGATCAAGA 57.264 30.769 0.00 0.00 0.00 3.02
2248 2592 8.735692 TGATGTATGCAAACTATGATCAAGAA 57.264 30.769 0.00 0.00 0.00 2.52
2249 2593 8.833493 TGATGTATGCAAACTATGATCAAGAAG 58.167 33.333 0.00 0.20 0.00 2.85
2250 2594 8.743085 ATGTATGCAAACTATGATCAAGAAGT 57.257 30.769 0.00 0.89 0.00 3.01
2251 2595 8.565896 TGTATGCAAACTATGATCAAGAAGTT 57.434 30.769 13.01 13.01 33.72 2.66
2252 2596 8.668353 TGTATGCAAACTATGATCAAGAAGTTC 58.332 33.333 17.02 0.00 31.15 3.01
2253 2597 6.500684 TGCAAACTATGATCAAGAAGTTCC 57.499 37.500 17.02 13.06 31.15 3.62
2254 2598 5.122239 TGCAAACTATGATCAAGAAGTTCCG 59.878 40.000 17.02 13.54 31.15 4.30
2255 2599 5.351465 GCAAACTATGATCAAGAAGTTCCGA 59.649 40.000 17.02 0.00 31.15 4.55
2256 2600 6.673316 GCAAACTATGATCAAGAAGTTCCGAC 60.673 42.308 17.02 7.68 31.15 4.79
2257 2601 5.012328 ACTATGATCAAGAAGTTCCGACC 57.988 43.478 0.00 0.00 0.00 4.79
2258 2602 4.712337 ACTATGATCAAGAAGTTCCGACCT 59.288 41.667 0.00 0.00 0.00 3.85
2259 2603 4.559862 ATGATCAAGAAGTTCCGACCTT 57.440 40.909 0.00 0.00 0.00 3.50
2260 2604 4.351874 TGATCAAGAAGTTCCGACCTTT 57.648 40.909 0.00 0.00 0.00 3.11
2261 2605 4.714632 TGATCAAGAAGTTCCGACCTTTT 58.285 39.130 0.00 0.00 0.00 2.27
2262 2606 4.755123 TGATCAAGAAGTTCCGACCTTTTC 59.245 41.667 0.00 0.00 0.00 2.29
2263 2607 4.145365 TCAAGAAGTTCCGACCTTTTCA 57.855 40.909 0.00 0.00 0.00 2.69
2264 2608 4.714632 TCAAGAAGTTCCGACCTTTTCAT 58.285 39.130 0.00 0.00 0.00 2.57
2265 2609 4.515191 TCAAGAAGTTCCGACCTTTTCATG 59.485 41.667 0.00 0.00 0.00 3.07
2266 2610 3.412386 AGAAGTTCCGACCTTTTCATGG 58.588 45.455 0.00 0.00 0.00 3.66
2267 2611 2.951229 AGTTCCGACCTTTTCATGGT 57.049 45.000 0.00 0.00 41.07 3.55
2268 2612 3.223674 AGTTCCGACCTTTTCATGGTT 57.776 42.857 0.00 0.00 38.03 3.67
2269 2613 3.562182 AGTTCCGACCTTTTCATGGTTT 58.438 40.909 0.00 0.00 38.03 3.27
2270 2614 3.568430 AGTTCCGACCTTTTCATGGTTTC 59.432 43.478 0.00 0.00 38.03 2.78
2271 2615 3.216187 TCCGACCTTTTCATGGTTTCA 57.784 42.857 0.00 0.00 38.03 2.69
2272 2616 2.882137 TCCGACCTTTTCATGGTTTCAC 59.118 45.455 0.00 0.00 38.03 3.18
2273 2617 2.884639 CCGACCTTTTCATGGTTTCACT 59.115 45.455 0.00 0.00 38.03 3.41
2274 2618 4.069304 CCGACCTTTTCATGGTTTCACTA 58.931 43.478 0.00 0.00 38.03 2.74
2275 2619 4.700213 CCGACCTTTTCATGGTTTCACTAT 59.300 41.667 0.00 0.00 38.03 2.12
2276 2620 5.391950 CCGACCTTTTCATGGTTTCACTATG 60.392 44.000 0.00 0.00 38.28 2.23
2277 2621 5.411361 CGACCTTTTCATGGTTTCACTATGA 59.589 40.000 0.00 0.00 43.04 2.15
2278 2622 6.402550 CGACCTTTTCATGGTTTCACTATGAG 60.403 42.308 3.53 0.00 44.88 2.90
2279 2623 5.183904 ACCTTTTCATGGTTTCACTATGAGC 59.816 40.000 3.53 0.00 44.88 4.26
2280 2624 5.416952 CCTTTTCATGGTTTCACTATGAGCT 59.583 40.000 3.53 0.00 44.88 4.09
2281 2625 5.885230 TTTCATGGTTTCACTATGAGCTG 57.115 39.130 0.00 0.00 44.88 4.24
2282 2626 3.877559 TCATGGTTTCACTATGAGCTGG 58.122 45.455 0.00 0.00 40.47 4.85
2283 2627 3.264193 TCATGGTTTCACTATGAGCTGGT 59.736 43.478 0.00 0.00 40.47 4.00
2284 2628 3.788227 TGGTTTCACTATGAGCTGGTT 57.212 42.857 0.00 0.00 0.00 3.67
2285 2629 4.901197 TGGTTTCACTATGAGCTGGTTA 57.099 40.909 0.00 0.00 0.00 2.85
2286 2630 4.832248 TGGTTTCACTATGAGCTGGTTAG 58.168 43.478 0.00 0.00 0.00 2.34
2287 2631 4.286032 TGGTTTCACTATGAGCTGGTTAGT 59.714 41.667 0.00 0.00 0.00 2.24
2288 2632 5.221843 TGGTTTCACTATGAGCTGGTTAGTT 60.222 40.000 0.00 0.00 0.00 2.24
2289 2633 5.705905 GGTTTCACTATGAGCTGGTTAGTTT 59.294 40.000 0.00 0.00 0.00 2.66
2290 2634 6.128254 GGTTTCACTATGAGCTGGTTAGTTTC 60.128 42.308 0.00 0.00 0.00 2.78
2291 2635 5.738619 TCACTATGAGCTGGTTAGTTTCA 57.261 39.130 0.00 0.00 0.00 2.69
2292 2636 6.299805 TCACTATGAGCTGGTTAGTTTCAT 57.700 37.500 0.00 0.00 35.75 2.57
2293 2637 6.711277 TCACTATGAGCTGGTTAGTTTCATT 58.289 36.000 0.00 0.00 34.47 2.57
2294 2638 7.168219 TCACTATGAGCTGGTTAGTTTCATTT 58.832 34.615 0.00 0.00 34.47 2.32
2295 2639 7.665559 TCACTATGAGCTGGTTAGTTTCATTTT 59.334 33.333 0.00 0.00 34.47 1.82
2296 2640 7.752239 CACTATGAGCTGGTTAGTTTCATTTTG 59.248 37.037 0.00 0.00 34.47 2.44
2297 2641 6.899393 ATGAGCTGGTTAGTTTCATTTTGA 57.101 33.333 0.00 0.00 31.03 2.69
2298 2642 6.899393 TGAGCTGGTTAGTTTCATTTTGAT 57.101 33.333 0.00 0.00 0.00 2.57
2299 2643 6.680810 TGAGCTGGTTAGTTTCATTTTGATG 58.319 36.000 0.00 0.00 0.00 3.07
2300 2644 6.265196 TGAGCTGGTTAGTTTCATTTTGATGT 59.735 34.615 0.00 0.00 0.00 3.06
2301 2645 7.446931 TGAGCTGGTTAGTTTCATTTTGATGTA 59.553 33.333 0.00 0.00 0.00 2.29
2302 2646 8.353423 AGCTGGTTAGTTTCATTTTGATGTAT 57.647 30.769 0.00 0.00 0.00 2.29
2303 2647 8.246180 AGCTGGTTAGTTTCATTTTGATGTATG 58.754 33.333 0.00 0.00 0.00 2.39
2304 2648 7.009540 GCTGGTTAGTTTCATTTTGATGTATGC 59.990 37.037 0.00 0.00 0.00 3.14
2467 2966 6.019748 ACTCTTCCTTTGATAGAGGTCTTCA 58.980 40.000 0.00 0.00 39.73 3.02
2702 3206 1.657094 CTTCCTTTTGCATTGCATCGC 59.343 47.619 12.95 1.03 38.76 4.58
2703 3207 0.602060 TCCTTTTGCATTGCATCGCA 59.398 45.000 12.95 6.46 38.76 5.10
2750 3254 6.667848 ACTTTATCTCCCAACATTTTAAGGGG 59.332 38.462 0.00 0.00 41.77 4.79
2763 3267 6.014584 ACATTTTAAGGGGTGGAGAAATGAAC 60.015 38.462 12.05 0.00 37.70 3.18
2783 3290 6.115446 TGAACCCTGTATTGATAAGCAGAAG 58.885 40.000 0.00 0.00 0.00 2.85
2784 3291 5.957771 ACCCTGTATTGATAAGCAGAAGA 57.042 39.130 0.00 0.00 0.00 2.87
2796 3303 8.635765 TGATAAGCAGAAGAAAGGTTATTGTT 57.364 30.769 0.00 0.00 38.22 2.83
2814 3321 0.842030 TTGTCAGGCTCAGGTCCCAT 60.842 55.000 0.00 0.00 0.00 4.00
2920 3449 6.688637 TCTTTGATGGTTATGATCAAGCTG 57.311 37.500 0.00 0.00 40.15 4.24
2998 3527 1.211212 AGTGGCTAGCATGCTGATTCA 59.789 47.619 30.42 18.45 0.00 2.57
3025 3557 0.110486 ATGGAGTCGTTTTGGCCAGT 59.890 50.000 5.11 0.00 31.23 4.00
3053 3585 7.936496 TTGAATAGTTGCCAATTGATCTGTA 57.064 32.000 7.12 0.00 0.00 2.74
3055 3587 7.112122 TGAATAGTTGCCAATTGATCTGTACT 58.888 34.615 7.12 4.28 0.00 2.73
3060 3592 5.159273 TGCCAATTGATCTGTACTGTGTA 57.841 39.130 7.12 0.00 0.00 2.90
3063 3595 6.051717 GCCAATTGATCTGTACTGTGTATCT 58.948 40.000 7.12 0.00 0.00 1.98
3064 3596 6.018425 GCCAATTGATCTGTACTGTGTATCTG 60.018 42.308 7.12 0.00 0.00 2.90
3068 3601 9.507329 AATTGATCTGTACTGTGTATCTGTTTT 57.493 29.630 0.00 0.00 0.00 2.43
3077 3610 7.264373 ACTGTGTATCTGTTTTCCTTTGAAG 57.736 36.000 0.00 0.00 0.00 3.02
3085 3618 6.852664 TCTGTTTTCCTTTGAAGTGAAGAAC 58.147 36.000 0.00 0.00 0.00 3.01
3089 3622 6.683974 TTTCCTTTGAAGTGAAGAACTGAG 57.316 37.500 0.00 0.00 39.81 3.35
3090 3623 5.359194 TCCTTTGAAGTGAAGAACTGAGT 57.641 39.130 0.00 0.00 39.81 3.41
3100 3633 6.389906 AGTGAAGAACTGAGTTTGGTTTTTG 58.610 36.000 0.00 0.00 37.88 2.44
3107 3640 5.821204 ACTGAGTTTGGTTTTTGAATCGAG 58.179 37.500 0.00 0.00 0.00 4.04
3111 3644 7.138736 TGAGTTTGGTTTTTGAATCGAGATTC 58.861 34.615 16.52 16.52 45.55 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 5.852282 TCATTGGATACTGATCAGTTCGA 57.148 39.130 32.14 21.42 42.54 3.71
11 12 6.908870 TTTCATTGGATACTGATCAGTTCG 57.091 37.500 32.14 15.53 42.54 3.95
37 38 9.252962 CTGCTCTTTAATGTCTGAAATGTTTTT 57.747 29.630 0.00 0.00 0.00 1.94
38 39 7.383300 GCTGCTCTTTAATGTCTGAAATGTTTT 59.617 33.333 0.00 0.00 0.00 2.43
39 40 6.865205 GCTGCTCTTTAATGTCTGAAATGTTT 59.135 34.615 0.00 0.00 0.00 2.83
40 41 6.016024 TGCTGCTCTTTAATGTCTGAAATGTT 60.016 34.615 0.00 0.00 0.00 2.71
41 42 5.474532 TGCTGCTCTTTAATGTCTGAAATGT 59.525 36.000 0.00 0.00 0.00 2.71
42 43 5.798934 GTGCTGCTCTTTAATGTCTGAAATG 59.201 40.000 0.00 0.00 0.00 2.32
43 44 5.474532 TGTGCTGCTCTTTAATGTCTGAAAT 59.525 36.000 0.00 0.00 0.00 2.17
44 45 4.821260 TGTGCTGCTCTTTAATGTCTGAAA 59.179 37.500 0.00 0.00 0.00 2.69
45 46 4.388485 TGTGCTGCTCTTTAATGTCTGAA 58.612 39.130 0.00 0.00 0.00 3.02
46 47 4.006780 TGTGCTGCTCTTTAATGTCTGA 57.993 40.909 0.00 0.00 0.00 3.27
47 48 4.959596 ATGTGCTGCTCTTTAATGTCTG 57.040 40.909 0.00 0.00 0.00 3.51
48 49 5.065731 GCTTATGTGCTGCTCTTTAATGTCT 59.934 40.000 0.00 0.00 0.00 3.41
49 50 5.163723 TGCTTATGTGCTGCTCTTTAATGTC 60.164 40.000 0.00 0.00 0.00 3.06
50 51 4.701651 TGCTTATGTGCTGCTCTTTAATGT 59.298 37.500 0.00 0.00 0.00 2.71
51 52 5.239359 TGCTTATGTGCTGCTCTTTAATG 57.761 39.130 0.00 0.00 0.00 1.90
52 53 5.393461 GGTTGCTTATGTGCTGCTCTTTAAT 60.393 40.000 0.00 0.00 0.00 1.40
53 54 4.082787 GGTTGCTTATGTGCTGCTCTTTAA 60.083 41.667 0.00 0.13 0.00 1.52
54 55 3.440173 GGTTGCTTATGTGCTGCTCTTTA 59.560 43.478 0.00 0.00 0.00 1.85
55 56 2.229784 GGTTGCTTATGTGCTGCTCTTT 59.770 45.455 0.00 0.00 0.00 2.52
56 57 1.815003 GGTTGCTTATGTGCTGCTCTT 59.185 47.619 0.00 0.00 0.00 2.85
57 58 1.004044 AGGTTGCTTATGTGCTGCTCT 59.996 47.619 0.00 0.00 0.00 4.09
58 59 1.457346 AGGTTGCTTATGTGCTGCTC 58.543 50.000 0.00 0.00 0.00 4.26
59 60 1.915141 AAGGTTGCTTATGTGCTGCT 58.085 45.000 0.00 0.00 0.00 4.24
60 61 2.730550 AAAGGTTGCTTATGTGCTGC 57.269 45.000 0.00 0.00 0.00 5.25
61 62 3.981211 ACAAAAGGTTGCTTATGTGCTG 58.019 40.909 0.00 0.00 38.39 4.41
62 63 4.670896 AACAAAAGGTTGCTTATGTGCT 57.329 36.364 0.00 0.00 38.60 4.40
63 64 5.500825 CAAAACAAAAGGTTGCTTATGTGC 58.499 37.500 0.00 0.00 40.35 4.57
64 65 5.814705 TCCAAAACAAAAGGTTGCTTATGTG 59.185 36.000 0.00 0.00 40.35 3.21
65 66 5.983540 TCCAAAACAAAAGGTTGCTTATGT 58.016 33.333 0.00 0.00 40.35 2.29
66 67 6.018832 CACTCCAAAACAAAAGGTTGCTTATG 60.019 38.462 0.00 0.00 40.35 1.90
67 68 6.048509 CACTCCAAAACAAAAGGTTGCTTAT 58.951 36.000 0.00 0.00 40.35 1.73
68 69 5.415221 CACTCCAAAACAAAAGGTTGCTTA 58.585 37.500 0.00 0.00 40.35 3.09
69 70 4.252878 CACTCCAAAACAAAAGGTTGCTT 58.747 39.130 0.00 0.00 40.35 3.91
70 71 3.369366 CCACTCCAAAACAAAAGGTTGCT 60.369 43.478 0.00 0.00 40.35 3.91
71 72 2.935849 CCACTCCAAAACAAAAGGTTGC 59.064 45.455 0.00 0.00 40.35 4.17
72 73 3.932089 CACCACTCCAAAACAAAAGGTTG 59.068 43.478 0.00 0.00 40.35 3.77
73 74 3.618752 GCACCACTCCAAAACAAAAGGTT 60.619 43.478 0.00 0.00 42.98 3.50
74 75 2.093711 GCACCACTCCAAAACAAAAGGT 60.094 45.455 0.00 0.00 0.00 3.50
75 76 2.093764 TGCACCACTCCAAAACAAAAGG 60.094 45.455 0.00 0.00 0.00 3.11
76 77 2.929398 GTGCACCACTCCAAAACAAAAG 59.071 45.455 5.22 0.00 0.00 2.27
77 78 2.300152 TGTGCACCACTCCAAAACAAAA 59.700 40.909 15.69 0.00 35.11 2.44
78 79 1.895798 TGTGCACCACTCCAAAACAAA 59.104 42.857 15.69 0.00 35.11 2.83
79 80 1.203523 GTGTGCACCACTCCAAAACAA 59.796 47.619 15.69 0.00 41.11 2.83
80 81 0.814457 GTGTGCACCACTCCAAAACA 59.186 50.000 15.69 0.00 41.11 2.83
81 82 3.641031 GTGTGCACCACTCCAAAAC 57.359 52.632 15.69 0.00 41.11 2.43
118 119 8.540388 ACACCATATCAAGTTCATAGTTACTGT 58.460 33.333 0.00 0.00 0.00 3.55
119 120 8.948631 ACACCATATCAAGTTCATAGTTACTG 57.051 34.615 0.00 0.00 0.00 2.74
120 121 9.601217 GAACACCATATCAAGTTCATAGTTACT 57.399 33.333 0.00 0.00 39.95 2.24
121 122 9.601217 AGAACACCATATCAAGTTCATAGTTAC 57.399 33.333 0.00 0.00 42.01 2.50
127 128 9.988815 GACTATAGAACACCATATCAAGTTCAT 57.011 33.333 6.78 0.00 42.01 2.57
128 129 8.421784 GGACTATAGAACACCATATCAAGTTCA 58.578 37.037 6.78 0.00 42.01 3.18
129 130 8.643324 AGGACTATAGAACACCATATCAAGTTC 58.357 37.037 6.78 0.00 40.37 3.01
130 131 8.424918 CAGGACTATAGAACACCATATCAAGTT 58.575 37.037 6.78 0.00 0.00 2.66
131 132 7.015682 CCAGGACTATAGAACACCATATCAAGT 59.984 40.741 6.78 0.00 0.00 3.16
132 133 7.233553 TCCAGGACTATAGAACACCATATCAAG 59.766 40.741 6.78 0.00 0.00 3.02
133 134 7.015292 GTCCAGGACTATAGAACACCATATCAA 59.985 40.741 12.94 0.00 0.00 2.57
134 135 6.493802 GTCCAGGACTATAGAACACCATATCA 59.506 42.308 12.94 0.00 0.00 2.15
135 136 6.493802 TGTCCAGGACTATAGAACACCATATC 59.506 42.308 20.82 0.00 33.15 1.63
136 137 6.267928 GTGTCCAGGACTATAGAACACCATAT 59.732 42.308 20.82 0.00 33.15 1.78
137 138 5.597182 GTGTCCAGGACTATAGAACACCATA 59.403 44.000 20.82 0.00 33.15 2.74
138 139 4.406003 GTGTCCAGGACTATAGAACACCAT 59.594 45.833 20.82 0.00 33.15 3.55
139 140 3.767673 GTGTCCAGGACTATAGAACACCA 59.232 47.826 20.82 0.00 33.15 4.17
140 141 4.024670 AGTGTCCAGGACTATAGAACACC 58.975 47.826 20.82 4.57 33.15 4.16
141 142 4.142138 CCAGTGTCCAGGACTATAGAACAC 60.142 50.000 20.82 8.30 33.15 3.32
142 143 4.023980 CCAGTGTCCAGGACTATAGAACA 58.976 47.826 20.82 0.00 33.15 3.18
143 144 4.279145 TCCAGTGTCCAGGACTATAGAAC 58.721 47.826 20.82 9.11 33.15 3.01
144 145 4.229812 TCTCCAGTGTCCAGGACTATAGAA 59.770 45.833 20.82 0.00 33.15 2.10
145 146 3.786450 TCTCCAGTGTCCAGGACTATAGA 59.214 47.826 20.82 12.49 33.15 1.98
146 147 4.171878 TCTCCAGTGTCCAGGACTATAG 57.828 50.000 20.82 10.56 33.15 1.31
147 148 4.603094 TTCTCCAGTGTCCAGGACTATA 57.397 45.455 20.82 0.00 33.15 1.31
148 149 3.474798 TTCTCCAGTGTCCAGGACTAT 57.525 47.619 20.82 6.23 33.15 2.12
149 150 2.992847 TTCTCCAGTGTCCAGGACTA 57.007 50.000 20.82 4.45 33.15 2.59
150 151 2.103153 TTTCTCCAGTGTCCAGGACT 57.897 50.000 20.82 0.00 33.15 3.85
151 152 2.930826 TTTTCTCCAGTGTCCAGGAC 57.069 50.000 13.35 13.35 0.00 3.85
152 153 2.487265 GCTTTTTCTCCAGTGTCCAGGA 60.487 50.000 0.00 0.00 0.00 3.86
153 154 1.882623 GCTTTTTCTCCAGTGTCCAGG 59.117 52.381 0.00 0.00 0.00 4.45
154 155 2.575532 TGCTTTTTCTCCAGTGTCCAG 58.424 47.619 0.00 0.00 0.00 3.86
155 156 2.687935 GTTGCTTTTTCTCCAGTGTCCA 59.312 45.455 0.00 0.00 0.00 4.02
156 157 2.952310 AGTTGCTTTTTCTCCAGTGTCC 59.048 45.455 0.00 0.00 0.00 4.02
157 158 3.793465 GCAGTTGCTTTTTCTCCAGTGTC 60.793 47.826 0.00 0.00 38.21 3.67
158 159 2.099756 GCAGTTGCTTTTTCTCCAGTGT 59.900 45.455 0.00 0.00 38.21 3.55
159 160 2.099592 TGCAGTTGCTTTTTCTCCAGTG 59.900 45.455 5.62 0.00 42.66 3.66
160 161 2.378038 TGCAGTTGCTTTTTCTCCAGT 58.622 42.857 5.62 0.00 42.66 4.00
161 162 3.314553 CATGCAGTTGCTTTTTCTCCAG 58.685 45.455 5.62 0.00 42.66 3.86
162 163 2.546373 GCATGCAGTTGCTTTTTCTCCA 60.546 45.455 14.21 0.00 42.66 3.86
163 164 2.064014 GCATGCAGTTGCTTTTTCTCC 58.936 47.619 14.21 0.00 42.66 3.71
164 165 2.746269 TGCATGCAGTTGCTTTTTCTC 58.254 42.857 18.46 0.00 43.18 2.87
165 166 2.894763 TGCATGCAGTTGCTTTTTCT 57.105 40.000 18.46 0.00 43.18 2.52
166 167 4.687483 AGTTATGCATGCAGTTGCTTTTTC 59.313 37.500 26.69 6.98 43.18 2.29
167 168 4.634199 AGTTATGCATGCAGTTGCTTTTT 58.366 34.783 26.69 8.22 43.18 1.94
168 169 4.261578 AGTTATGCATGCAGTTGCTTTT 57.738 36.364 26.69 9.00 43.18 2.27
169 170 3.947910 AGTTATGCATGCAGTTGCTTT 57.052 38.095 26.69 9.79 43.18 3.51
170 171 5.345702 CATTAGTTATGCATGCAGTTGCTT 58.654 37.500 26.69 10.57 43.18 3.91
171 172 4.928601 CATTAGTTATGCATGCAGTTGCT 58.071 39.130 26.69 20.84 43.18 3.91
183 184 5.614308 TGGAGGACTGATGCATTAGTTATG 58.386 41.667 23.41 0.00 37.31 1.90
184 185 5.894298 TGGAGGACTGATGCATTAGTTAT 57.106 39.130 23.41 15.51 0.00 1.89
185 186 5.221722 GGATGGAGGACTGATGCATTAGTTA 60.222 44.000 23.41 9.83 0.00 2.24
186 187 4.445448 GGATGGAGGACTGATGCATTAGTT 60.445 45.833 23.41 10.26 0.00 2.24
187 188 3.072184 GGATGGAGGACTGATGCATTAGT 59.928 47.826 22.87 22.87 0.00 2.24
188 189 3.558746 GGGATGGAGGACTGATGCATTAG 60.559 52.174 16.41 16.41 0.00 1.73
189 190 2.373169 GGGATGGAGGACTGATGCATTA 59.627 50.000 0.00 0.00 0.00 1.90
190 191 1.144503 GGGATGGAGGACTGATGCATT 59.855 52.381 0.00 0.00 0.00 3.56
191 192 0.769873 GGGATGGAGGACTGATGCAT 59.230 55.000 0.00 0.00 0.00 3.96
192 193 0.621280 TGGGATGGAGGACTGATGCA 60.621 55.000 0.00 0.00 0.00 3.96
193 194 0.769873 ATGGGATGGAGGACTGATGC 59.230 55.000 0.00 0.00 0.00 3.91
194 195 2.563261 CATGGGATGGAGGACTGATG 57.437 55.000 0.00 0.00 0.00 3.07
205 206 0.620030 TGTCCAGTGTCCATGGGATG 59.380 55.000 13.02 5.71 38.44 3.51
206 207 0.620556 GTGTCCAGTGTCCATGGGAT 59.379 55.000 13.02 0.00 38.44 3.85
207 208 0.473694 AGTGTCCAGTGTCCATGGGA 60.474 55.000 13.02 0.00 38.44 4.37
208 209 0.321919 CAGTGTCCAGTGTCCATGGG 60.322 60.000 13.02 0.00 38.44 4.00
209 210 0.321919 CCAGTGTCCAGTGTCCATGG 60.322 60.000 4.97 4.97 39.33 3.66
210 211 0.686789 TCCAGTGTCCAGTGTCCATG 59.313 55.000 1.74 0.00 0.00 3.66
211 212 0.979665 CTCCAGTGTCCAGTGTCCAT 59.020 55.000 1.74 0.00 0.00 3.41
212 213 0.105709 TCTCCAGTGTCCAGTGTCCA 60.106 55.000 1.74 0.00 0.00 4.02
213 214 1.048601 TTCTCCAGTGTCCAGTGTCC 58.951 55.000 1.74 0.00 0.00 4.02
214 215 1.412710 TGTTCTCCAGTGTCCAGTGTC 59.587 52.381 1.74 0.00 0.00 3.67
215 216 1.496060 TGTTCTCCAGTGTCCAGTGT 58.504 50.000 1.74 0.00 0.00 3.55
216 217 2.487934 CTTGTTCTCCAGTGTCCAGTG 58.512 52.381 0.00 0.00 0.00 3.66
217 218 1.202698 GCTTGTTCTCCAGTGTCCAGT 60.203 52.381 0.00 0.00 0.00 4.00
218 219 1.202687 TGCTTGTTCTCCAGTGTCCAG 60.203 52.381 0.00 0.00 0.00 3.86
219 220 0.836606 TGCTTGTTCTCCAGTGTCCA 59.163 50.000 0.00 0.00 0.00 4.02
220 221 2.191128 ATGCTTGTTCTCCAGTGTCC 57.809 50.000 0.00 0.00 0.00 4.02
221 222 3.681897 CAGTATGCTTGTTCTCCAGTGTC 59.318 47.826 0.00 0.00 0.00 3.67
222 223 3.668447 CAGTATGCTTGTTCTCCAGTGT 58.332 45.455 0.00 0.00 0.00 3.55
237 238 5.297527 TCCATGCTATTCAGTTTGCAGTATG 59.702 40.000 0.00 0.00 38.87 2.39
238 239 5.439721 TCCATGCTATTCAGTTTGCAGTAT 58.560 37.500 0.00 0.00 38.87 2.12
239 240 4.842574 TCCATGCTATTCAGTTTGCAGTA 58.157 39.130 0.00 0.00 38.87 2.74
240 241 3.689347 TCCATGCTATTCAGTTTGCAGT 58.311 40.909 0.00 0.00 38.87 4.40
241 242 4.707030 TTCCATGCTATTCAGTTTGCAG 57.293 40.909 0.00 0.00 38.87 4.41
242 243 5.664294 ATTTCCATGCTATTCAGTTTGCA 57.336 34.783 0.00 0.00 39.83 4.08
243 244 8.786898 TCTATATTTCCATGCTATTCAGTTTGC 58.213 33.333 0.00 0.00 0.00 3.68
245 246 8.993121 CGTCTATATTTCCATGCTATTCAGTTT 58.007 33.333 0.00 0.00 0.00 2.66
246 247 7.604164 CCGTCTATATTTCCATGCTATTCAGTT 59.396 37.037 0.00 0.00 0.00 3.16
247 248 7.099764 CCGTCTATATTTCCATGCTATTCAGT 58.900 38.462 0.00 0.00 0.00 3.41
248 249 6.036517 GCCGTCTATATTTCCATGCTATTCAG 59.963 42.308 0.00 0.00 0.00 3.02
249 250 5.874810 GCCGTCTATATTTCCATGCTATTCA 59.125 40.000 0.00 0.00 0.00 2.57
250 251 5.874810 TGCCGTCTATATTTCCATGCTATTC 59.125 40.000 0.00 0.00 0.00 1.75
251 252 5.804639 TGCCGTCTATATTTCCATGCTATT 58.195 37.500 0.00 0.00 0.00 1.73
252 253 5.420725 TGCCGTCTATATTTCCATGCTAT 57.579 39.130 0.00 0.00 0.00 2.97
253 254 4.882842 TGCCGTCTATATTTCCATGCTA 57.117 40.909 0.00 0.00 0.00 3.49
254 255 3.769739 TGCCGTCTATATTTCCATGCT 57.230 42.857 0.00 0.00 0.00 3.79
255 256 4.829064 TTTGCCGTCTATATTTCCATGC 57.171 40.909 0.00 0.00 0.00 4.06
256 257 7.040755 TGGTATTTTGCCGTCTATATTTCCATG 60.041 37.037 0.00 0.00 0.00 3.66
257 258 7.001674 TGGTATTTTGCCGTCTATATTTCCAT 58.998 34.615 0.00 0.00 0.00 3.41
258 259 6.358178 TGGTATTTTGCCGTCTATATTTCCA 58.642 36.000 0.00 0.00 0.00 3.53
259 260 6.870971 TGGTATTTTGCCGTCTATATTTCC 57.129 37.500 0.00 0.00 0.00 3.13
260 261 8.015658 GTCATGGTATTTTGCCGTCTATATTTC 58.984 37.037 0.00 0.00 0.00 2.17
261 262 7.500892 TGTCATGGTATTTTGCCGTCTATATTT 59.499 33.333 0.00 0.00 0.00 1.40
262 263 6.995686 TGTCATGGTATTTTGCCGTCTATATT 59.004 34.615 0.00 0.00 0.00 1.28
263 264 6.530120 TGTCATGGTATTTTGCCGTCTATAT 58.470 36.000 0.00 0.00 0.00 0.86
264 265 5.919755 TGTCATGGTATTTTGCCGTCTATA 58.080 37.500 0.00 0.00 0.00 1.31
265 266 4.776349 TGTCATGGTATTTTGCCGTCTAT 58.224 39.130 0.00 0.00 0.00 1.98
266 267 4.209307 TGTCATGGTATTTTGCCGTCTA 57.791 40.909 0.00 0.00 0.00 2.59
267 268 3.066291 TGTCATGGTATTTTGCCGTCT 57.934 42.857 0.00 0.00 0.00 4.18
268 269 3.840890 TTGTCATGGTATTTTGCCGTC 57.159 42.857 0.00 0.00 0.00 4.79
269 270 4.202161 TGTTTTGTCATGGTATTTTGCCGT 60.202 37.500 0.00 0.00 0.00 5.68
270 271 4.302455 TGTTTTGTCATGGTATTTTGCCG 58.698 39.130 0.00 0.00 0.00 5.69
271 272 7.897575 TTATGTTTTGTCATGGTATTTTGCC 57.102 32.000 0.00 0.00 0.00 4.52
275 276 9.777297 AGCTTTTTATGTTTTGTCATGGTATTT 57.223 25.926 0.00 0.00 0.00 1.40
279 280 9.855021 GTATAGCTTTTTATGTTTTGTCATGGT 57.145 29.630 0.00 0.00 0.00 3.55
284 285 9.278734 GCTGAGTATAGCTTTTTATGTTTTGTC 57.721 33.333 0.00 0.00 40.52 3.18
285 286 8.792633 TGCTGAGTATAGCTTTTTATGTTTTGT 58.207 29.630 0.00 0.00 44.01 2.83
286 287 9.282247 CTGCTGAGTATAGCTTTTTATGTTTTG 57.718 33.333 0.00 0.00 44.01 2.44
287 288 9.231297 TCTGCTGAGTATAGCTTTTTATGTTTT 57.769 29.630 0.00 0.00 44.01 2.43
288 289 8.792830 TCTGCTGAGTATAGCTTTTTATGTTT 57.207 30.769 0.00 0.00 44.01 2.83
289 290 8.669243 GTTCTGCTGAGTATAGCTTTTTATGTT 58.331 33.333 0.00 0.00 44.01 2.71
290 291 8.043710 AGTTCTGCTGAGTATAGCTTTTTATGT 58.956 33.333 0.00 0.00 44.01 2.29
291 292 8.430801 AGTTCTGCTGAGTATAGCTTTTTATG 57.569 34.615 0.00 0.00 44.01 1.90
292 293 9.103861 GAAGTTCTGCTGAGTATAGCTTTTTAT 57.896 33.333 0.00 0.00 44.01 1.40
293 294 8.094548 TGAAGTTCTGCTGAGTATAGCTTTTTA 58.905 33.333 4.17 0.00 44.01 1.52
294 295 6.936900 TGAAGTTCTGCTGAGTATAGCTTTTT 59.063 34.615 4.17 0.00 44.01 1.94
295 296 6.467677 TGAAGTTCTGCTGAGTATAGCTTTT 58.532 36.000 4.17 0.00 44.01 2.27
296 297 6.042638 TGAAGTTCTGCTGAGTATAGCTTT 57.957 37.500 4.17 0.00 44.01 3.51
297 298 5.186797 ACTGAAGTTCTGCTGAGTATAGCTT 59.813 40.000 9.48 0.00 44.01 3.74
298 299 4.709397 ACTGAAGTTCTGCTGAGTATAGCT 59.291 41.667 9.48 0.00 44.01 3.32
299 300 4.803088 CACTGAAGTTCTGCTGAGTATAGC 59.197 45.833 9.48 0.00 43.95 2.97
300 301 4.803088 GCACTGAAGTTCTGCTGAGTATAG 59.197 45.833 9.48 0.00 0.00 1.31
301 302 4.382040 GGCACTGAAGTTCTGCTGAGTATA 60.382 45.833 14.62 0.00 0.00 1.47
302 303 3.594134 GCACTGAAGTTCTGCTGAGTAT 58.406 45.455 9.48 0.00 0.00 2.12
303 304 2.289072 GGCACTGAAGTTCTGCTGAGTA 60.289 50.000 14.62 0.00 0.00 2.59
304 305 1.542108 GGCACTGAAGTTCTGCTGAGT 60.542 52.381 14.62 2.64 0.00 3.41
305 306 1.155042 GGCACTGAAGTTCTGCTGAG 58.845 55.000 14.62 2.06 0.00 3.35
306 307 0.601046 CGGCACTGAAGTTCTGCTGA 60.601 55.000 17.05 0.00 34.08 4.26
307 308 1.572085 CCGGCACTGAAGTTCTGCTG 61.572 60.000 15.66 15.66 0.00 4.41
308 309 1.302033 CCGGCACTGAAGTTCTGCT 60.302 57.895 14.62 0.00 0.00 4.24
309 310 1.301716 TCCGGCACTGAAGTTCTGC 60.302 57.895 9.48 8.84 0.00 4.26
310 311 0.034059 AGTCCGGCACTGAAGTTCTG 59.966 55.000 8.11 8.11 32.26 3.02
311 312 0.318762 GAGTCCGGCACTGAAGTTCT 59.681 55.000 10.72 0.00 34.41 3.01
312 313 0.033504 TGAGTCCGGCACTGAAGTTC 59.966 55.000 10.72 0.00 34.41 3.01
313 314 0.468226 TTGAGTCCGGCACTGAAGTT 59.532 50.000 10.72 0.00 34.41 2.66
314 315 0.687354 ATTGAGTCCGGCACTGAAGT 59.313 50.000 10.72 0.00 31.01 3.01
315 316 1.466167 CAATTGAGTCCGGCACTGAAG 59.534 52.381 10.72 0.00 31.01 3.02
316 317 1.522668 CAATTGAGTCCGGCACTGAA 58.477 50.000 10.72 9.27 34.41 3.02
317 318 0.955428 GCAATTGAGTCCGGCACTGA 60.955 55.000 10.34 0.71 34.41 3.41
318 319 1.236616 TGCAATTGAGTCCGGCACTG 61.237 55.000 10.34 0.00 34.41 3.66
319 320 0.322816 ATGCAATTGAGTCCGGCACT 60.323 50.000 10.34 0.47 37.30 4.40
320 321 0.527565 AATGCAATTGAGTCCGGCAC 59.472 50.000 10.34 0.00 37.30 5.01
321 322 1.742831 GTAATGCAATTGAGTCCGGCA 59.257 47.619 10.34 0.00 36.99 5.69
322 323 1.268032 CGTAATGCAATTGAGTCCGGC 60.268 52.381 10.34 0.00 36.99 6.13
323 324 2.276201 TCGTAATGCAATTGAGTCCGG 58.724 47.619 10.34 0.00 36.99 5.14
324 325 4.335082 TTTCGTAATGCAATTGAGTCCG 57.665 40.909 10.34 4.25 36.99 4.79
325 326 7.016361 AGTATTTCGTAATGCAATTGAGTCC 57.984 36.000 10.34 0.00 36.99 3.85
326 327 8.062448 GGTAGTATTTCGTAATGCAATTGAGTC 58.938 37.037 10.34 0.00 36.99 3.36
327 328 7.769044 AGGTAGTATTTCGTAATGCAATTGAGT 59.231 33.333 10.34 0.00 36.99 3.41
328 329 8.142994 AGGTAGTATTTCGTAATGCAATTGAG 57.857 34.615 10.34 0.00 36.99 3.02
329 330 7.985184 AGAGGTAGTATTTCGTAATGCAATTGA 59.015 33.333 10.34 0.00 36.99 2.57
330 331 8.142994 AGAGGTAGTATTTCGTAATGCAATTG 57.857 34.615 0.00 0.00 36.99 2.32
331 332 9.998106 ATAGAGGTAGTATTTCGTAATGCAATT 57.002 29.630 5.72 0.00 41.28 2.32
332 333 9.640963 GATAGAGGTAGTATTTCGTAATGCAAT 57.359 33.333 5.72 0.00 0.00 3.56
333 334 8.086522 GGATAGAGGTAGTATTTCGTAATGCAA 58.913 37.037 5.72 0.00 0.00 4.08
334 335 7.309621 GGGATAGAGGTAGTATTTCGTAATGCA 60.310 40.741 5.72 0.00 0.00 3.96
335 336 7.034397 GGGATAGAGGTAGTATTTCGTAATGC 58.966 42.308 0.00 0.00 0.00 3.56
336 337 8.118976 TGGGATAGAGGTAGTATTTCGTAATG 57.881 38.462 0.00 0.00 0.00 1.90
337 338 8.716674 TTGGGATAGAGGTAGTATTTCGTAAT 57.283 34.615 0.00 0.00 0.00 1.89
338 339 8.537728 TTTGGGATAGAGGTAGTATTTCGTAA 57.462 34.615 0.00 0.00 0.00 3.18
339 340 8.716674 ATTTGGGATAGAGGTAGTATTTCGTA 57.283 34.615 0.00 0.00 0.00 3.43
340 341 7.613551 ATTTGGGATAGAGGTAGTATTTCGT 57.386 36.000 0.00 0.00 0.00 3.85
402 403 3.971032 ATATAAAAGGCAAGCACTCGC 57.029 42.857 0.00 0.00 38.99 5.03
403 404 6.555315 AGAAAATATAAAAGGCAAGCACTCG 58.445 36.000 0.00 0.00 0.00 4.18
404 405 9.855021 TTAAGAAAATATAAAAGGCAAGCACTC 57.145 29.630 0.00 0.00 0.00 3.51
434 435 6.016610 TGAGGCTAGTTTGCTTATTCGTTTTT 60.017 34.615 0.00 0.00 0.00 1.94
435 436 5.472137 TGAGGCTAGTTTGCTTATTCGTTTT 59.528 36.000 0.00 0.00 0.00 2.43
436 437 5.001232 TGAGGCTAGTTTGCTTATTCGTTT 58.999 37.500 0.00 0.00 0.00 3.60
437 438 4.392138 GTGAGGCTAGTTTGCTTATTCGTT 59.608 41.667 0.00 0.00 0.00 3.85
438 439 3.933332 GTGAGGCTAGTTTGCTTATTCGT 59.067 43.478 0.00 0.00 0.00 3.85
439 440 3.932710 TGTGAGGCTAGTTTGCTTATTCG 59.067 43.478 0.00 0.00 0.00 3.34
440 441 5.355350 ACATGTGAGGCTAGTTTGCTTATTC 59.645 40.000 0.00 0.00 0.00 1.75
441 442 5.256474 ACATGTGAGGCTAGTTTGCTTATT 58.744 37.500 0.00 0.00 0.00 1.40
442 443 4.848357 ACATGTGAGGCTAGTTTGCTTAT 58.152 39.130 0.00 0.00 0.00 1.73
443 444 4.286297 ACATGTGAGGCTAGTTTGCTTA 57.714 40.909 0.00 0.00 0.00 3.09
444 445 3.146104 ACATGTGAGGCTAGTTTGCTT 57.854 42.857 0.00 0.00 0.00 3.91
445 446 2.867109 ACATGTGAGGCTAGTTTGCT 57.133 45.000 0.00 0.00 0.00 3.91
446 447 5.567138 ATTTACATGTGAGGCTAGTTTGC 57.433 39.130 9.11 0.00 0.00 3.68
447 448 5.801947 GCAATTTACATGTGAGGCTAGTTTG 59.198 40.000 9.11 1.26 0.00 2.93
448 449 5.476599 TGCAATTTACATGTGAGGCTAGTTT 59.523 36.000 9.11 0.00 0.00 2.66
449 450 5.009631 TGCAATTTACATGTGAGGCTAGTT 58.990 37.500 9.11 0.00 0.00 2.24
450 451 4.396166 GTGCAATTTACATGTGAGGCTAGT 59.604 41.667 9.11 0.00 0.00 2.57
451 452 4.395854 TGTGCAATTTACATGTGAGGCTAG 59.604 41.667 9.11 0.00 0.00 3.42
452 453 4.155826 GTGTGCAATTTACATGTGAGGCTA 59.844 41.667 9.11 0.00 0.00 3.93
453 454 3.057315 GTGTGCAATTTACATGTGAGGCT 60.057 43.478 9.11 0.00 0.00 4.58
454 455 3.057315 AGTGTGCAATTTACATGTGAGGC 60.057 43.478 9.11 6.35 0.00 4.70
462 463 5.001232 GGAGGAAGTAGTGTGCAATTTACA 58.999 41.667 0.00 0.00 0.00 2.41
471 472 1.196012 GAGGGGGAGGAAGTAGTGTG 58.804 60.000 0.00 0.00 0.00 3.82
472 473 0.042881 GGAGGGGGAGGAAGTAGTGT 59.957 60.000 0.00 0.00 0.00 3.55
473 474 0.691413 GGGAGGGGGAGGAAGTAGTG 60.691 65.000 0.00 0.00 0.00 2.74
493 494 4.074970 GCTGGGAAGATGAAAGAAACAGA 58.925 43.478 0.00 0.00 0.00 3.41
494 495 4.077822 AGCTGGGAAGATGAAAGAAACAG 58.922 43.478 0.00 0.00 0.00 3.16
496 497 4.321527 CCAAGCTGGGAAGATGAAAGAAAC 60.322 45.833 0.00 0.00 32.67 2.78
497 498 3.828451 CCAAGCTGGGAAGATGAAAGAAA 59.172 43.478 0.00 0.00 32.67 2.52
500 501 1.475682 GCCAAGCTGGGAAGATGAAAG 59.524 52.381 12.85 0.00 38.19 2.62
503 510 0.627451 ATGCCAAGCTGGGAAGATGA 59.373 50.000 12.85 0.00 42.59 2.92
515 522 0.392863 TGACGTCCATGGATGCCAAG 60.393 55.000 30.24 14.33 36.95 3.61
593 619 4.670221 CGAGCAAATGCCAGAGACTAAAAC 60.670 45.833 0.94 0.00 43.38 2.43
600 626 0.742281 GCTCGAGCAAATGCCAGAGA 60.742 55.000 31.91 9.55 43.24 3.10
602 628 3.895025 GCTCGAGCAAATGCCAGA 58.105 55.556 31.91 1.25 43.38 3.86
645 671 1.664649 CGCTTGTCGGCTGAACTGA 60.665 57.895 0.00 0.00 33.78 3.41
646 672 1.016130 ATCGCTTGTCGGCTGAACTG 61.016 55.000 0.00 0.00 39.05 3.16
647 673 0.737715 GATCGCTTGTCGGCTGAACT 60.738 55.000 0.00 0.00 39.05 3.01
648 674 1.696832 GGATCGCTTGTCGGCTGAAC 61.697 60.000 0.00 0.00 39.05 3.18
650 676 1.960040 ATGGATCGCTTGTCGGCTGA 61.960 55.000 0.00 0.00 39.05 4.26
651 677 1.493950 GATGGATCGCTTGTCGGCTG 61.494 60.000 0.00 0.00 39.05 4.85
652 678 1.227380 GATGGATCGCTTGTCGGCT 60.227 57.895 0.00 0.00 39.05 5.52
653 679 2.247437 GGATGGATCGCTTGTCGGC 61.247 63.158 0.00 0.00 39.05 5.54
682 767 2.430921 GCAGTCGTGAGGTCGGTG 60.431 66.667 0.00 0.00 0.00 4.94
687 772 0.540830 AAGAGGAGCAGTCGTGAGGT 60.541 55.000 0.00 0.00 0.00 3.85
695 780 0.957362 GCAAGCAAAAGAGGAGCAGT 59.043 50.000 0.00 0.00 0.00 4.40
736 821 1.066573 AGAAATGACTGTCAGCGAGGG 60.067 52.381 16.46 0.00 0.00 4.30
749 834 4.016444 CGAGGGGGAATGAAAAGAAATGA 58.984 43.478 0.00 0.00 0.00 2.57
756 841 2.167662 GAAAGCGAGGGGGAATGAAAA 58.832 47.619 0.00 0.00 0.00 2.29
781 867 1.456544 GCAACCAACGACGAATACGAA 59.543 47.619 0.00 0.00 42.66 3.85
782 868 1.062258 GCAACCAACGACGAATACGA 58.938 50.000 0.00 0.00 42.66 3.43
783 869 0.094046 GGCAACCAACGACGAATACG 59.906 55.000 0.00 0.00 45.75 3.06
785 871 0.319727 ACGGCAACCAACGACGAATA 60.320 50.000 0.00 0.00 0.00 1.75
786 872 1.161563 AACGGCAACCAACGACGAAT 61.162 50.000 0.00 0.00 0.00 3.34
787 873 1.814586 AACGGCAACCAACGACGAA 60.815 52.632 0.00 0.00 0.00 3.85
788 874 2.202905 AACGGCAACCAACGACGA 60.203 55.556 0.00 0.00 0.00 4.20
789 875 2.052590 CAACGGCAACCAACGACG 60.053 61.111 0.00 0.00 0.00 5.12
790 876 1.155424 TCTCAACGGCAACCAACGAC 61.155 55.000 0.00 0.00 0.00 4.34
793 879 0.240945 CCATCTCAACGGCAACCAAC 59.759 55.000 0.00 0.00 0.00 3.77
805 891 0.468226 GAATACCACGGGCCATCTCA 59.532 55.000 4.39 0.00 0.00 3.27
813 899 2.676342 GTTTACAGCTGAATACCACGGG 59.324 50.000 23.35 0.00 0.00 5.28
827 913 0.250124 TGGCCCACACTCGTTTACAG 60.250 55.000 0.00 0.00 0.00 2.74
866 952 0.539051 AGGCCACCTCTTCTCATTCG 59.461 55.000 5.01 0.00 0.00 3.34
908 1094 5.024785 AGCTAGGTCTTTCCCGAAAATAG 57.975 43.478 0.00 0.00 36.75 1.73
944 1137 1.805869 CAGAGCAAAGAGGAGTGGTG 58.194 55.000 0.00 0.00 0.00 4.17
1012 1209 3.388703 CTCCTGCTCCTGCTCCTGC 62.389 68.421 0.00 0.00 40.48 4.85
1013 1210 2.901813 CTCCTGCTCCTGCTCCTG 59.098 66.667 0.00 0.00 40.48 3.86
1014 1211 3.082701 GCTCCTGCTCCTGCTCCT 61.083 66.667 0.00 0.00 40.48 3.69
1015 1212 3.388703 CTGCTCCTGCTCCTGCTCC 62.389 68.421 0.00 0.00 40.48 4.70
1016 1213 1.897225 TTCTGCTCCTGCTCCTGCTC 61.897 60.000 0.00 0.00 40.48 4.26
1017 1214 1.901654 CTTCTGCTCCTGCTCCTGCT 61.902 60.000 0.00 0.00 40.48 4.24
1018 1215 1.449956 CTTCTGCTCCTGCTCCTGC 60.450 63.158 0.00 0.00 40.48 4.85
1019 1216 1.449956 GCTTCTGCTCCTGCTCCTG 60.450 63.158 0.00 0.00 40.48 3.86
1020 1217 2.988800 GCTTCTGCTCCTGCTCCT 59.011 61.111 0.00 0.00 40.48 3.69
1021 1218 2.511145 CGCTTCTGCTCCTGCTCC 60.511 66.667 0.00 0.00 40.48 4.70
1022 1219 1.809209 GTCGCTTCTGCTCCTGCTC 60.809 63.158 0.00 0.00 40.48 4.26
1023 1220 2.264166 GTCGCTTCTGCTCCTGCT 59.736 61.111 0.00 0.00 40.48 4.24
1034 1231 3.453679 GGAGGAGAGGCGTCGCTT 61.454 66.667 18.11 9.97 32.24 4.68
1101 1298 3.508840 CGGAGGACGCATTTGGGC 61.509 66.667 0.00 0.00 34.82 5.36
1590 1889 0.473694 TCAGTTCCTTGGCCTCAGGA 60.474 55.000 17.85 17.85 0.00 3.86
1836 2162 0.323908 CCCGGTATTTGAAGGCCCAA 60.324 55.000 0.00 0.00 0.00 4.12
2024 2359 4.597507 TCTGAAGATTTGTAGGACCAAGGT 59.402 41.667 0.00 0.00 0.00 3.50
2190 2534 1.339631 CCGGCTCATAGTGAACCCAAA 60.340 52.381 0.00 0.00 28.91 3.28
2235 2579 4.712337 AGGTCGGAACTTCTTGATCATAGT 59.288 41.667 0.00 0.00 0.00 2.12
2236 2580 5.269505 AGGTCGGAACTTCTTGATCATAG 57.730 43.478 0.00 0.00 0.00 2.23
2238 2582 4.559862 AAGGTCGGAACTTCTTGATCAT 57.440 40.909 1.57 0.00 0.00 2.45
2239 2583 4.351874 AAAGGTCGGAACTTCTTGATCA 57.648 40.909 9.05 0.00 0.00 2.92
2240 2584 4.755123 TGAAAAGGTCGGAACTTCTTGATC 59.245 41.667 9.05 4.09 0.00 2.92
2241 2585 4.714632 TGAAAAGGTCGGAACTTCTTGAT 58.285 39.130 9.05 0.00 0.00 2.57
2242 2586 4.145365 TGAAAAGGTCGGAACTTCTTGA 57.855 40.909 9.05 0.00 0.00 3.02
2243 2587 4.320494 CCATGAAAAGGTCGGAACTTCTTG 60.320 45.833 9.05 6.25 0.00 3.02
2244 2588 3.821033 CCATGAAAAGGTCGGAACTTCTT 59.179 43.478 9.05 5.91 0.00 2.52
2245 2589 3.181443 ACCATGAAAAGGTCGGAACTTCT 60.181 43.478 9.05 0.00 32.90 2.85
2246 2590 3.146847 ACCATGAAAAGGTCGGAACTTC 58.853 45.455 9.05 0.00 32.90 3.01
2247 2591 3.223674 ACCATGAAAAGGTCGGAACTT 57.776 42.857 1.57 1.57 32.90 2.66
2248 2592 2.951229 ACCATGAAAAGGTCGGAACT 57.049 45.000 0.00 0.00 32.90 3.01
2249 2593 3.316868 TGAAACCATGAAAAGGTCGGAAC 59.683 43.478 0.00 0.00 38.76 3.62
2250 2594 3.316868 GTGAAACCATGAAAAGGTCGGAA 59.683 43.478 0.00 0.00 38.76 4.30
2251 2595 2.882137 GTGAAACCATGAAAAGGTCGGA 59.118 45.455 0.00 0.00 38.76 4.55
2252 2596 2.884639 AGTGAAACCATGAAAAGGTCGG 59.115 45.455 0.00 0.00 38.76 4.79
2253 2597 5.411361 TCATAGTGAAACCATGAAAAGGTCG 59.589 40.000 0.00 0.00 38.76 4.79
2254 2598 6.623767 GCTCATAGTGAAACCATGAAAAGGTC 60.624 42.308 0.00 0.00 38.76 3.85
2255 2599 5.183904 GCTCATAGTGAAACCATGAAAAGGT 59.816 40.000 0.00 0.00 42.34 3.50
2256 2600 5.416952 AGCTCATAGTGAAACCATGAAAAGG 59.583 40.000 0.00 0.00 37.80 3.11
2257 2601 6.320171 CAGCTCATAGTGAAACCATGAAAAG 58.680 40.000 0.00 0.00 37.80 2.27
2258 2602 5.183713 CCAGCTCATAGTGAAACCATGAAAA 59.816 40.000 0.00 0.00 37.80 2.29
2259 2603 4.701651 CCAGCTCATAGTGAAACCATGAAA 59.298 41.667 0.00 0.00 37.80 2.69
2260 2604 4.263462 ACCAGCTCATAGTGAAACCATGAA 60.263 41.667 0.00 0.00 37.80 2.57
2261 2605 3.264193 ACCAGCTCATAGTGAAACCATGA 59.736 43.478 0.00 0.00 37.80 3.07
2262 2606 3.614092 ACCAGCTCATAGTGAAACCATG 58.386 45.455 0.00 0.00 37.80 3.66
2263 2607 4.307032 AACCAGCTCATAGTGAAACCAT 57.693 40.909 0.00 0.00 37.80 3.55
2264 2608 3.788227 AACCAGCTCATAGTGAAACCA 57.212 42.857 0.00 0.00 37.80 3.67
2265 2609 4.833390 ACTAACCAGCTCATAGTGAAACC 58.167 43.478 2.62 0.00 37.80 3.27
2266 2610 6.426937 TGAAACTAACCAGCTCATAGTGAAAC 59.573 38.462 3.96 0.00 30.61 2.78
2267 2611 6.530120 TGAAACTAACCAGCTCATAGTGAAA 58.470 36.000 3.96 0.00 30.61 2.69
2268 2612 6.109156 TGAAACTAACCAGCTCATAGTGAA 57.891 37.500 3.96 0.00 30.61 3.18
2269 2613 5.738619 TGAAACTAACCAGCTCATAGTGA 57.261 39.130 3.96 0.00 30.61 3.41
2270 2614 6.992063 AATGAAACTAACCAGCTCATAGTG 57.008 37.500 3.96 0.00 30.93 2.74
2271 2615 7.665559 TCAAAATGAAACTAACCAGCTCATAGT 59.334 33.333 0.00 0.00 30.93 2.12
2272 2616 8.044060 TCAAAATGAAACTAACCAGCTCATAG 57.956 34.615 0.00 0.00 30.93 2.23
2273 2617 7.994425 TCAAAATGAAACTAACCAGCTCATA 57.006 32.000 0.00 0.00 30.93 2.15
2274 2618 6.899393 TCAAAATGAAACTAACCAGCTCAT 57.101 33.333 0.00 0.00 31.91 2.90
2275 2619 6.265196 ACATCAAAATGAAACTAACCAGCTCA 59.735 34.615 0.00 0.00 36.67 4.26
2276 2620 6.681777 ACATCAAAATGAAACTAACCAGCTC 58.318 36.000 0.00 0.00 36.67 4.09
2277 2621 6.655078 ACATCAAAATGAAACTAACCAGCT 57.345 33.333 0.00 0.00 36.67 4.24
2278 2622 7.009540 GCATACATCAAAATGAAACTAACCAGC 59.990 37.037 0.00 0.00 36.67 4.85
2279 2623 8.028354 TGCATACATCAAAATGAAACTAACCAG 58.972 33.333 0.00 0.00 36.67 4.00
2280 2624 7.890515 TGCATACATCAAAATGAAACTAACCA 58.109 30.769 0.00 0.00 36.67 3.67
2281 2625 8.755696 TTGCATACATCAAAATGAAACTAACC 57.244 30.769 0.00 0.00 36.67 2.85
2283 2627 9.979578 AGTTTGCATACATCAAAATGAAACTAA 57.020 25.926 10.02 0.00 34.90 2.24
2289 2633 9.955208 GATCATAGTTTGCATACATCAAAATGA 57.045 29.630 10.02 8.38 36.21 2.57
2290 2634 9.738832 TGATCATAGTTTGCATACATCAAAATG 57.261 29.630 10.02 4.00 35.49 2.32
2292 2636 9.791820 CTTGATCATAGTTTGCATACATCAAAA 57.208 29.630 16.09 2.87 35.49 2.44
2293 2637 9.176460 TCTTGATCATAGTTTGCATACATCAAA 57.824 29.630 16.09 8.87 30.65 2.69
2294 2638 8.735692 TCTTGATCATAGTTTGCATACATCAA 57.264 30.769 15.15 15.15 0.00 2.57
2295 2639 8.735692 TTCTTGATCATAGTTTGCATACATCA 57.264 30.769 10.02 6.94 0.00 3.07
2296 2640 8.834465 ACTTCTTGATCATAGTTTGCATACATC 58.166 33.333 10.02 4.56 0.00 3.06
2297 2641 8.743085 ACTTCTTGATCATAGTTTGCATACAT 57.257 30.769 10.02 0.00 0.00 2.29
2298 2642 8.565896 AACTTCTTGATCATAGTTTGCATACA 57.434 30.769 10.02 0.00 0.00 2.29
2299 2643 8.125448 GGAACTTCTTGATCATAGTTTGCATAC 58.875 37.037 15.39 0.00 31.41 2.39
2300 2644 7.011389 CGGAACTTCTTGATCATAGTTTGCATA 59.989 37.037 15.39 0.00 31.41 3.14
2301 2645 6.183360 CGGAACTTCTTGATCATAGTTTGCAT 60.183 38.462 15.39 0.00 31.41 3.96
2302 2646 5.122239 CGGAACTTCTTGATCATAGTTTGCA 59.878 40.000 15.39 0.00 31.41 4.08
2303 2647 5.351465 TCGGAACTTCTTGATCATAGTTTGC 59.649 40.000 15.39 7.46 31.41 3.68
2304 2648 6.183360 GGTCGGAACTTCTTGATCATAGTTTG 60.183 42.308 15.39 12.40 31.41 2.93
2467 2966 4.595986 AGCACCGGGTAATCAGTAAAAAT 58.404 39.130 6.32 0.00 0.00 1.82
2599 3102 3.561310 TGCAACAGAACATCTCACTGAAC 59.439 43.478 0.00 0.00 35.85 3.18
2680 3184 3.777478 CGATGCAATGCAAAAGGAAGAT 58.223 40.909 13.45 0.00 43.62 2.40
2684 3188 0.602060 TGCGATGCAATGCAAAAGGA 59.398 45.000 13.45 4.98 43.62 3.36
2689 3193 0.531200 TTCCATGCGATGCAATGCAA 59.469 45.000 13.45 0.00 45.45 4.08
2716 3220 6.644347 TGTTGGGAGATAAAGTGAAGAGATC 58.356 40.000 0.00 0.00 0.00 2.75
2750 3254 5.253330 TCAATACAGGGTTCATTTCTCCAC 58.747 41.667 0.00 0.00 0.00 4.02
2763 3267 6.261826 CCTTTCTTCTGCTTATCAATACAGGG 59.738 42.308 0.00 0.00 0.00 4.45
2783 3290 4.518970 TGAGCCTGACAACAATAACCTTTC 59.481 41.667 0.00 0.00 0.00 2.62
2784 3291 4.469657 TGAGCCTGACAACAATAACCTTT 58.530 39.130 0.00 0.00 0.00 3.11
2796 3303 0.042581 TATGGGACCTGAGCCTGACA 59.957 55.000 0.00 0.00 0.00 3.58
2814 3321 2.869101 TGGCTGGCAGTTACACAATA 57.131 45.000 17.16 0.00 0.00 1.90
2965 3494 1.720781 AGCCACTTCAGCCCAAAAAT 58.279 45.000 0.00 0.00 0.00 1.82
3030 3562 7.066163 CAGTACAGATCAATTGGCAACTATTCA 59.934 37.037 0.00 0.00 40.12 2.57
3050 3582 7.276658 TCAAAGGAAAACAGATACACAGTACA 58.723 34.615 0.00 0.00 0.00 2.90
3053 3585 6.828785 ACTTCAAAGGAAAACAGATACACAGT 59.171 34.615 0.00 0.00 31.35 3.55
3055 3587 6.826231 TCACTTCAAAGGAAAACAGATACACA 59.174 34.615 0.00 0.00 31.35 3.72
3060 3592 7.340487 AGTTCTTCACTTCAAAGGAAAACAGAT 59.660 33.333 0.00 0.00 27.32 2.90
3063 3595 6.432783 TCAGTTCTTCACTTCAAAGGAAAACA 59.567 34.615 0.00 0.00 30.92 2.83
3064 3596 6.852664 TCAGTTCTTCACTTCAAAGGAAAAC 58.147 36.000 0.00 4.09 30.92 2.43
3068 3601 5.359194 ACTCAGTTCTTCACTTCAAAGGA 57.641 39.130 0.00 0.00 30.92 3.36
3077 3610 6.386654 TCAAAAACCAAACTCAGTTCTTCAC 58.613 36.000 0.00 0.00 0.00 3.18
3085 3618 6.060028 TCTCGATTCAAAAACCAAACTCAG 57.940 37.500 0.00 0.00 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.