Multiple sequence alignment - TraesCS3B01G445700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G445700 chr3B 100.000 2540 0 0 1 2540 685226556 685229095 0.000000e+00 4691.0
1 TraesCS3B01G445700 chr3B 87.302 945 70 25 1 932 503983721 503984628 0.000000e+00 1035.0
2 TraesCS3B01G445700 chr1A 97.524 929 19 2 1 929 493732021 493732945 0.000000e+00 1585.0
3 TraesCS3B01G445700 chr1A 92.250 529 36 4 404 929 517326775 517327301 0.000000e+00 745.0
4 TraesCS3B01G445700 chr1A 88.732 355 17 6 1 343 517326395 517326738 1.820000e-111 412.0
5 TraesCS3B01G445700 chr2B 97.306 928 23 2 1 928 791285165 791284240 0.000000e+00 1574.0
6 TraesCS3B01G445700 chr2B 94.755 286 15 0 1711 1996 111009126 111009411 1.790000e-121 446.0
7 TraesCS3B01G445700 chr2B 93.023 301 18 3 1700 2000 107096793 107096496 1.080000e-118 436.0
8 TraesCS3B01G445700 chr7A 87.606 944 64 26 1 928 706403549 706402643 0.000000e+00 1046.0
9 TraesCS3B01G445700 chr7A 91.304 529 40 5 404 929 712074145 712074670 0.000000e+00 717.0
10 TraesCS3B01G445700 chr7A 88.169 355 18 6 1 343 712073766 712074108 3.940000e-108 401.0
11 TraesCS3B01G445700 chr7A 92.118 203 16 0 2338 2540 640599946 640600148 1.150000e-73 287.0
12 TraesCS3B01G445700 chr7A 91.429 140 12 0 2008 2147 640599374 640599513 2.580000e-45 193.0
13 TraesCS3B01G445700 chr7A 100.000 58 0 0 2225 2282 640599892 640599949 9.610000e-20 108.0
14 TraesCS3B01G445700 chr3A 95.260 654 22 1 929 1573 655727489 655728142 0.000000e+00 1027.0
15 TraesCS3B01G445700 chr3A 89.225 529 53 4 404 928 584032569 584033097 0.000000e+00 658.0
16 TraesCS3B01G445700 chr3A 89.947 378 23 8 1 367 584032212 584032585 8.220000e-130 473.0
17 TraesCS3B01G445700 chr1D 94.118 527 28 2 404 928 481612319 481612844 0.000000e+00 798.0
18 TraesCS3B01G445700 chr1D 93.103 377 13 5 1 368 481611964 481612336 7.990000e-150 540.0
19 TraesCS3B01G445700 chr1D 94.792 288 11 4 1710 1996 316011339 316011055 1.790000e-121 446.0
20 TraesCS3B01G445700 chr5D 87.214 524 57 9 405 927 292726542 292726028 2.810000e-164 588.0
21 TraesCS3B01G445700 chr5D 95.760 283 12 0 1714 1996 450609051 450608769 8.280000e-125 457.0
22 TraesCS3B01G445700 chr6B 95.139 288 14 0 1712 1999 578559457 578559170 2.980000e-124 455.0
23 TraesCS3B01G445700 chr6B 72.222 486 115 18 947 1425 680725407 680725879 5.700000e-27 132.0
24 TraesCS3B01G445700 chr3D 95.122 287 12 2 1710 1996 454197119 454197403 3.850000e-123 451.0
25 TraesCS3B01G445700 chr3D 93.898 295 16 2 1709 2002 536025875 536025582 6.450000e-121 444.0
26 TraesCS3B01G445700 chr3D 89.450 218 14 6 159 368 134640244 134640460 1.500000e-67 267.0
27 TraesCS3B01G445700 chr2D 95.406 283 12 1 1714 1996 540821510 540821229 1.390000e-122 449.0
28 TraesCS3B01G445700 chr2D 95.390 282 13 0 1715 1996 590369249 590369530 1.390000e-122 449.0
29 TraesCS3B01G445700 chr4A 86.000 400 19 16 1 367 428829709 428829314 6.590000e-106 394.0
30 TraesCS3B01G445700 chr5B 94.089 203 12 0 2338 2540 447187482 447187280 2.450000e-80 309.0
31 TraesCS3B01G445700 chr5B 84.211 304 13 5 2014 2282 447187782 447187479 1.940000e-66 263.0
32 TraesCS3B01G445700 chr5B 89.349 169 14 2 2014 2179 615014315 615014148 2.560000e-50 209.0
33 TraesCS3B01G445700 chr5B 90.323 124 12 0 2038 2161 615013863 615013986 2.020000e-36 163.0
34 TraesCS3B01G445700 chr5B 73.714 350 78 11 940 1285 578815547 578815886 9.540000e-25 124.0
35 TraesCS3B01G445700 chr7D 93.137 204 13 1 2338 2540 604378664 604378867 5.310000e-77 298.0
36 TraesCS3B01G445700 chr7D 87.137 241 15 5 2008 2232 604378391 604378631 2.510000e-65 259.0
37 TraesCS3B01G445700 chr7D 86.875 160 13 3 2008 2162 604377204 604377360 3.360000e-39 172.0
38 TraesCS3B01G445700 chr2A 90.148 203 11 3 2338 2540 478898802 478898995 3.240000e-64 255.0
39 TraesCS3B01G445700 chr2A 81.935 310 21 11 2008 2282 478898496 478898805 1.970000e-56 230.0
40 TraesCS3B01G445700 chr2A 93.007 143 10 0 2397 2539 735543029 735543171 2.560000e-50 209.0
41 TraesCS3B01G445700 chr2A 88.312 154 10 3 2014 2162 478901168 478901018 7.220000e-41 178.0
42 TraesCS3B01G445700 chr2A 93.617 47 1 2 363 407 183553653 183553607 4.530000e-08 69.4
43 TraesCS3B01G445700 chr5A 90.780 141 13 0 2018 2158 620480104 620480244 3.340000e-44 189.0
44 TraesCS3B01G445700 chr5A 93.023 43 2 1 363 404 547375373 547375331 7.590000e-06 62.1
45 TraesCS3B01G445700 chr4D 88.387 155 18 0 2008 2162 9743885 9744039 1.200000e-43 187.0
46 TraesCS3B01G445700 chr4D 95.238 42 2 0 2499 2540 9745414 9745373 1.630000e-07 67.6
47 TraesCS3B01G445700 chr6D 72.802 489 107 21 947 1425 448810352 448810824 2.630000e-30 143.0
48 TraesCS3B01G445700 chr6A 72.428 486 114 18 947 1425 594958890 594959362 1.230000e-28 137.0
49 TraesCS3B01G445700 chr1B 97.500 40 1 0 365 404 279445735 279445696 4.530000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G445700 chr3B 685226556 685229095 2539 False 4691.0 4691 100.000000 1 2540 1 chr3B.!!$F2 2539
1 TraesCS3B01G445700 chr3B 503983721 503984628 907 False 1035.0 1035 87.302000 1 932 1 chr3B.!!$F1 931
2 TraesCS3B01G445700 chr1A 493732021 493732945 924 False 1585.0 1585 97.524000 1 929 1 chr1A.!!$F1 928
3 TraesCS3B01G445700 chr1A 517326395 517327301 906 False 578.5 745 90.491000 1 929 2 chr1A.!!$F2 928
4 TraesCS3B01G445700 chr2B 791284240 791285165 925 True 1574.0 1574 97.306000 1 928 1 chr2B.!!$R2 927
5 TraesCS3B01G445700 chr7A 706402643 706403549 906 True 1046.0 1046 87.606000 1 928 1 chr7A.!!$R1 927
6 TraesCS3B01G445700 chr7A 712073766 712074670 904 False 559.0 717 89.736500 1 929 2 chr7A.!!$F2 928
7 TraesCS3B01G445700 chr3A 655727489 655728142 653 False 1027.0 1027 95.260000 929 1573 1 chr3A.!!$F1 644
8 TraesCS3B01G445700 chr3A 584032212 584033097 885 False 565.5 658 89.586000 1 928 2 chr3A.!!$F2 927
9 TraesCS3B01G445700 chr1D 481611964 481612844 880 False 669.0 798 93.610500 1 928 2 chr1D.!!$F1 927
10 TraesCS3B01G445700 chr5D 292726028 292726542 514 True 588.0 588 87.214000 405 927 1 chr5D.!!$R1 522
11 TraesCS3B01G445700 chr5B 447187280 447187782 502 True 286.0 309 89.150000 2014 2540 2 chr5B.!!$R2 526
12 TraesCS3B01G445700 chr7D 604377204 604378867 1663 False 243.0 298 89.049667 2008 2540 3 chr7D.!!$F1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
923 975 0.618458 CCCAAAATCTCAGGACCGGA 59.382 55.0 9.46 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2126 3374 0.034337 TAGTTTGGAGCCGAGCGTTT 59.966 50.0 0.0 0.0 0.0 3.6 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
396 441 4.015872 CAGTACACCTGCTTTTTCCCTA 57.984 45.455 0.00 0.00 33.59 3.53
637 684 9.860898 ACAATAACTCAAAAGAGATTAAATGGC 57.139 29.630 0.00 0.00 0.00 4.40
923 975 0.618458 CCCAAAATCTCAGGACCGGA 59.382 55.000 9.46 0.00 0.00 5.14
1122 1183 1.016130 CGGTGAAGACGAAGCTGCAT 61.016 55.000 1.02 0.00 0.00 3.96
1138 1199 1.875963 CATGACGCCAACAACCTCC 59.124 57.895 0.00 0.00 0.00 4.30
1140 1201 0.606401 ATGACGCCAACAACCTCCTG 60.606 55.000 0.00 0.00 0.00 3.86
1156 1217 3.672295 CTGAAGGCTGGTCTCGGGC 62.672 68.421 0.00 0.00 44.31 6.13
1192 1253 2.914289 GGAGGCACATGGAGGAGG 59.086 66.667 0.00 0.00 0.00 4.30
1209 1270 0.605589 AGGTCTTCCAGAAGCTGTCG 59.394 55.000 2.38 0.00 38.28 4.35
1211 1272 1.016653 GTCTTCCAGAAGCTGTCGCC 61.017 60.000 2.38 0.00 38.28 5.54
1218 1279 3.291101 GAAGCTGTCGCCGTGGGTA 62.291 63.158 0.00 0.00 36.60 3.69
1236 1297 2.097825 GTACCCAGTCTGTACGTCCAT 58.902 52.381 0.00 0.00 30.30 3.41
1251 1312 2.385013 TCCATGACAAGGACATCGTG 57.615 50.000 0.00 0.00 0.00 4.35
1296 1357 4.218578 CAGCGGAGGCAGCTCGAT 62.219 66.667 7.36 0.00 44.06 3.59
1300 1361 2.033793 CGGAGGCAGCTCGATAAGA 58.966 57.895 0.00 0.00 0.00 2.10
1389 1450 1.449246 CAAGGAGAAGGAGCTGCCG 60.449 63.158 0.00 0.00 43.43 5.69
1497 1558 2.949106 CAGCAGTGGTGGAAAGCG 59.051 61.111 14.66 0.00 0.00 4.68
1500 1561 1.675641 GCAGTGGTGGAAAGCGGAT 60.676 57.895 0.00 0.00 0.00 4.18
1573 1634 6.136541 ACTTCTTCTCACCAAATCACAAAC 57.863 37.500 0.00 0.00 0.00 2.93
1574 1635 5.888161 ACTTCTTCTCACCAAATCACAAACT 59.112 36.000 0.00 0.00 0.00 2.66
1575 1636 7.054124 ACTTCTTCTCACCAAATCACAAACTA 58.946 34.615 0.00 0.00 0.00 2.24
1576 1637 7.227512 ACTTCTTCTCACCAAATCACAAACTAG 59.772 37.037 0.00 0.00 0.00 2.57
1577 1638 5.470098 TCTTCTCACCAAATCACAAACTAGC 59.530 40.000 0.00 0.00 0.00 3.42
1578 1639 4.973168 TCTCACCAAATCACAAACTAGCT 58.027 39.130 0.00 0.00 0.00 3.32
1579 1640 6.109156 TCTCACCAAATCACAAACTAGCTA 57.891 37.500 0.00 0.00 0.00 3.32
1580 1641 6.166279 TCTCACCAAATCACAAACTAGCTAG 58.834 40.000 19.44 19.44 0.00 3.42
1581 1642 4.695455 TCACCAAATCACAAACTAGCTAGC 59.305 41.667 20.91 6.62 0.00 3.42
1582 1643 4.697352 CACCAAATCACAAACTAGCTAGCT 59.303 41.667 23.12 23.12 0.00 3.32
1583 1644 4.697352 ACCAAATCACAAACTAGCTAGCTG 59.303 41.667 27.68 19.05 0.00 4.24
1584 1645 4.095483 CCAAATCACAAACTAGCTAGCTGG 59.905 45.833 27.68 26.29 0.00 4.85
1585 1646 4.826274 AATCACAAACTAGCTAGCTGGA 57.174 40.909 32.14 11.10 0.00 3.86
1586 1647 4.826274 ATCACAAACTAGCTAGCTGGAA 57.174 40.909 32.14 10.32 0.00 3.53
1587 1648 4.617253 TCACAAACTAGCTAGCTGGAAA 57.383 40.909 32.14 9.94 0.00 3.13
1588 1649 4.569943 TCACAAACTAGCTAGCTGGAAAG 58.430 43.478 32.14 20.96 0.00 2.62
1589 1650 3.126000 CACAAACTAGCTAGCTGGAAAGC 59.874 47.826 32.14 0.00 39.08 3.51
1615 1676 9.926751 CTAGATTTAGCACAAGATATGTTGTTG 57.073 33.333 15.13 11.72 41.46 3.33
1616 1677 7.253422 AGATTTAGCACAAGATATGTTGTTGC 58.747 34.615 21.61 21.61 41.46 4.17
1617 1678 3.476295 AGCACAAGATATGTTGTTGCG 57.524 42.857 15.13 6.38 41.46 4.85
1618 1679 2.813754 AGCACAAGATATGTTGTTGCGT 59.186 40.909 15.13 9.58 41.46 5.24
1619 1680 2.910482 GCACAAGATATGTTGTTGCGTG 59.090 45.455 15.13 5.77 41.46 5.34
1620 1681 3.364864 GCACAAGATATGTTGTTGCGTGA 60.365 43.478 15.13 0.00 41.46 4.35
1621 1682 4.672542 GCACAAGATATGTTGTTGCGTGAT 60.673 41.667 15.13 0.00 41.46 3.06
1622 1683 5.023920 CACAAGATATGTTGTTGCGTGATC 58.976 41.667 15.13 0.00 41.46 2.92
1623 1684 4.201714 ACAAGATATGTTGTTGCGTGATCG 60.202 41.667 12.23 0.00 40.06 3.69
1644 1705 3.604875 CAGAAATTTCTGCCTGGCAAT 57.395 42.857 29.90 10.77 46.97 3.56
1645 1706 3.518590 CAGAAATTTCTGCCTGGCAATC 58.481 45.455 29.90 13.15 46.97 2.67
1646 1707 3.056393 CAGAAATTTCTGCCTGGCAATCA 60.056 43.478 29.90 9.27 46.97 2.57
1647 1708 3.773119 AGAAATTTCTGCCTGGCAATCAT 59.227 39.130 23.51 11.23 38.41 2.45
1648 1709 4.224370 AGAAATTTCTGCCTGGCAATCATT 59.776 37.500 23.51 16.29 38.41 2.57
1649 1710 3.814005 ATTTCTGCCTGGCAATCATTC 57.186 42.857 23.51 0.00 38.41 2.67
1650 1711 2.219080 TTCTGCCTGGCAATCATTCA 57.781 45.000 23.51 0.00 38.41 2.57
1651 1712 2.219080 TCTGCCTGGCAATCATTCAA 57.781 45.000 23.51 0.00 38.41 2.69
1652 1713 2.527497 TCTGCCTGGCAATCATTCAAA 58.473 42.857 23.51 0.00 38.41 2.69
1653 1714 2.494471 TCTGCCTGGCAATCATTCAAAG 59.506 45.455 23.51 6.86 38.41 2.77
1654 1715 2.232941 CTGCCTGGCAATCATTCAAAGT 59.767 45.455 23.51 0.00 38.41 2.66
1655 1716 2.028839 TGCCTGGCAATCATTCAAAGTG 60.029 45.455 21.08 0.00 34.76 3.16
1656 1717 2.028748 GCCTGGCAATCATTCAAAGTGT 60.029 45.455 15.17 0.00 0.00 3.55
1657 1718 3.555586 GCCTGGCAATCATTCAAAGTGTT 60.556 43.478 15.17 0.00 0.00 3.32
1658 1719 4.634199 CCTGGCAATCATTCAAAGTGTTT 58.366 39.130 0.00 0.00 0.00 2.83
1659 1720 4.449743 CCTGGCAATCATTCAAAGTGTTTG 59.550 41.667 0.00 0.00 41.96 2.93
1660 1721 3.808726 TGGCAATCATTCAAAGTGTTTGC 59.191 39.130 11.44 11.44 45.06 3.68
1661 1722 4.060205 GGCAATCATTCAAAGTGTTTGCT 58.940 39.130 16.62 0.00 45.10 3.91
1662 1723 4.084223 GGCAATCATTCAAAGTGTTTGCTG 60.084 41.667 16.62 0.00 45.10 4.41
1663 1724 4.084223 GCAATCATTCAAAGTGTTTGCTGG 60.084 41.667 12.23 0.00 43.64 4.85
1664 1725 4.942761 ATCATTCAAAGTGTTTGCTGGT 57.057 36.364 0.00 0.00 40.43 4.00
1665 1726 4.734398 TCATTCAAAGTGTTTGCTGGTT 57.266 36.364 0.00 0.00 40.43 3.67
1666 1727 4.431809 TCATTCAAAGTGTTTGCTGGTTG 58.568 39.130 0.00 0.00 40.43 3.77
1667 1728 2.957491 TCAAAGTGTTTGCTGGTTGG 57.043 45.000 0.00 0.00 40.43 3.77
1668 1729 2.451490 TCAAAGTGTTTGCTGGTTGGA 58.549 42.857 0.00 0.00 40.43 3.53
1669 1730 2.165437 TCAAAGTGTTTGCTGGTTGGAC 59.835 45.455 0.00 0.00 40.43 4.02
1670 1731 1.846007 AAGTGTTTGCTGGTTGGACA 58.154 45.000 0.00 0.00 0.00 4.02
1671 1732 1.392589 AGTGTTTGCTGGTTGGACAG 58.607 50.000 0.00 0.00 41.41 3.51
1672 1733 1.064758 AGTGTTTGCTGGTTGGACAGA 60.065 47.619 0.00 0.00 40.97 3.41
1673 1734 1.065551 GTGTTTGCTGGTTGGACAGAC 59.934 52.381 0.00 0.00 40.97 3.51
1674 1735 0.668535 GTTTGCTGGTTGGACAGACC 59.331 55.000 0.00 0.00 40.97 3.85
1675 1736 0.550914 TTTGCTGGTTGGACAGACCT 59.449 50.000 0.00 0.00 40.97 3.85
1676 1737 0.550914 TTGCTGGTTGGACAGACCTT 59.449 50.000 0.00 0.00 40.97 3.50
1677 1738 0.179020 TGCTGGTTGGACAGACCTTG 60.179 55.000 0.00 0.00 40.97 3.61
1678 1739 0.890996 GCTGGTTGGACAGACCTTGG 60.891 60.000 0.00 0.00 40.97 3.61
1679 1740 0.474184 CTGGTTGGACAGACCTTGGT 59.526 55.000 0.00 0.00 40.97 3.67
1680 1741 1.697432 CTGGTTGGACAGACCTTGGTA 59.303 52.381 0.00 0.00 40.97 3.25
1681 1742 1.418637 TGGTTGGACAGACCTTGGTAC 59.581 52.381 0.00 0.00 38.04 3.34
1682 1743 1.271217 GGTTGGACAGACCTTGGTACC 60.271 57.143 4.43 4.43 39.86 3.34
1683 1744 1.697982 GTTGGACAGACCTTGGTACCT 59.302 52.381 14.36 0.00 39.86 3.08
1684 1745 2.105993 GTTGGACAGACCTTGGTACCTT 59.894 50.000 14.36 0.00 39.86 3.50
1685 1746 3.263369 TGGACAGACCTTGGTACCTTA 57.737 47.619 14.36 0.00 39.86 2.69
1686 1747 3.798515 TGGACAGACCTTGGTACCTTAT 58.201 45.455 14.36 0.00 39.86 1.73
1687 1748 4.172807 TGGACAGACCTTGGTACCTTATT 58.827 43.478 14.36 0.00 39.86 1.40
1688 1749 5.343715 TGGACAGACCTTGGTACCTTATTA 58.656 41.667 14.36 0.00 39.86 0.98
1689 1750 5.188359 TGGACAGACCTTGGTACCTTATTAC 59.812 44.000 14.36 0.74 39.86 1.89
1690 1751 5.424573 GGACAGACCTTGGTACCTTATTACT 59.575 44.000 14.36 3.10 35.41 2.24
1691 1752 6.406737 GGACAGACCTTGGTACCTTATTACTC 60.407 46.154 14.36 0.00 35.41 2.59
1692 1753 6.021030 ACAGACCTTGGTACCTTATTACTCA 58.979 40.000 14.36 0.00 0.00 3.41
1693 1754 6.154706 ACAGACCTTGGTACCTTATTACTCAG 59.845 42.308 14.36 0.00 0.00 3.35
1694 1755 5.128991 AGACCTTGGTACCTTATTACTCAGC 59.871 44.000 14.36 0.00 0.00 4.26
1695 1756 5.030820 ACCTTGGTACCTTATTACTCAGCT 58.969 41.667 14.36 0.00 0.00 4.24
1696 1757 5.128991 ACCTTGGTACCTTATTACTCAGCTC 59.871 44.000 14.36 0.00 0.00 4.09
1697 1758 5.128827 CCTTGGTACCTTATTACTCAGCTCA 59.871 44.000 14.36 0.00 0.00 4.26
1698 1759 6.351881 CCTTGGTACCTTATTACTCAGCTCAA 60.352 42.308 14.36 0.00 0.00 3.02
1699 1760 6.222038 TGGTACCTTATTACTCAGCTCAAG 57.778 41.667 14.36 0.00 0.00 3.02
1700 1761 5.955959 TGGTACCTTATTACTCAGCTCAAGA 59.044 40.000 14.36 0.00 0.00 3.02
1701 1762 6.127423 TGGTACCTTATTACTCAGCTCAAGAC 60.127 42.308 14.36 0.00 0.00 3.01
1702 1763 6.097129 GGTACCTTATTACTCAGCTCAAGACT 59.903 42.308 4.06 0.00 0.00 3.24
1703 1764 7.284944 GGTACCTTATTACTCAGCTCAAGACTA 59.715 40.741 4.06 0.00 0.00 2.59
1704 1765 7.719871 ACCTTATTACTCAGCTCAAGACTAA 57.280 36.000 0.00 0.00 0.00 2.24
1705 1766 8.312669 ACCTTATTACTCAGCTCAAGACTAAT 57.687 34.615 0.00 0.00 0.00 1.73
1706 1767 8.200792 ACCTTATTACTCAGCTCAAGACTAATG 58.799 37.037 0.00 0.00 0.00 1.90
1707 1768 7.655328 CCTTATTACTCAGCTCAAGACTAATGG 59.345 40.741 0.00 0.00 0.00 3.16
1708 1769 6.552445 ATTACTCAGCTCAAGACTAATGGT 57.448 37.500 0.00 0.00 0.00 3.55
1709 1770 7.661536 ATTACTCAGCTCAAGACTAATGGTA 57.338 36.000 0.00 0.00 0.00 3.25
1710 1771 7.661536 TTACTCAGCTCAAGACTAATGGTAT 57.338 36.000 0.00 0.00 0.00 2.73
1711 1772 6.552445 ACTCAGCTCAAGACTAATGGTATT 57.448 37.500 0.00 0.00 0.00 1.89
1712 1773 6.344500 ACTCAGCTCAAGACTAATGGTATTG 58.656 40.000 0.00 0.00 45.38 1.90
1718 1779 6.485830 TCAAGACTAATGGTATTGAGAGGG 57.514 41.667 2.69 0.00 46.87 4.30
1719 1780 5.964477 TCAAGACTAATGGTATTGAGAGGGT 59.036 40.000 2.69 0.00 46.87 4.34
1720 1781 5.878406 AGACTAATGGTATTGAGAGGGTG 57.122 43.478 0.00 0.00 0.00 4.61
1721 1782 5.281314 AGACTAATGGTATTGAGAGGGTGT 58.719 41.667 0.00 0.00 0.00 4.16
1722 1783 5.726793 AGACTAATGGTATTGAGAGGGTGTT 59.273 40.000 0.00 0.00 0.00 3.32
1723 1784 6.215636 AGACTAATGGTATTGAGAGGGTGTTT 59.784 38.462 0.00 0.00 0.00 2.83
1724 1785 6.180472 ACTAATGGTATTGAGAGGGTGTTTG 58.820 40.000 0.00 0.00 0.00 2.93
1725 1786 4.657814 ATGGTATTGAGAGGGTGTTTGT 57.342 40.909 0.00 0.00 0.00 2.83
1726 1787 4.447138 TGGTATTGAGAGGGTGTTTGTT 57.553 40.909 0.00 0.00 0.00 2.83
1727 1788 4.798882 TGGTATTGAGAGGGTGTTTGTTT 58.201 39.130 0.00 0.00 0.00 2.83
1728 1789 5.205056 TGGTATTGAGAGGGTGTTTGTTTT 58.795 37.500 0.00 0.00 0.00 2.43
1729 1790 5.300792 TGGTATTGAGAGGGTGTTTGTTTTC 59.699 40.000 0.00 0.00 0.00 2.29
1730 1791 5.300792 GGTATTGAGAGGGTGTTTGTTTTCA 59.699 40.000 0.00 0.00 0.00 2.69
1731 1792 4.981806 TTGAGAGGGTGTTTGTTTTCAG 57.018 40.909 0.00 0.00 0.00 3.02
1732 1793 3.287222 TGAGAGGGTGTTTGTTTTCAGG 58.713 45.455 0.00 0.00 0.00 3.86
1733 1794 2.623416 GAGAGGGTGTTTGTTTTCAGGG 59.377 50.000 0.00 0.00 0.00 4.45
1734 1795 2.243736 AGAGGGTGTTTGTTTTCAGGGA 59.756 45.455 0.00 0.00 0.00 4.20
1735 1796 2.361119 GAGGGTGTTTGTTTTCAGGGAC 59.639 50.000 0.00 0.00 0.00 4.46
1736 1797 2.024369 AGGGTGTTTGTTTTCAGGGACT 60.024 45.455 0.00 0.00 43.88 3.85
1737 1798 2.764010 GGGTGTTTGTTTTCAGGGACTT 59.236 45.455 0.00 0.00 34.60 3.01
1738 1799 3.955551 GGGTGTTTGTTTTCAGGGACTTA 59.044 43.478 0.00 0.00 34.60 2.24
1739 1800 4.587262 GGGTGTTTGTTTTCAGGGACTTAT 59.413 41.667 0.00 0.00 34.60 1.73
1740 1801 5.069914 GGGTGTTTGTTTTCAGGGACTTATT 59.930 40.000 0.00 0.00 34.60 1.40
1741 1802 5.983118 GGTGTTTGTTTTCAGGGACTTATTG 59.017 40.000 0.00 0.00 34.60 1.90
1742 1803 5.983118 GTGTTTGTTTTCAGGGACTTATTGG 59.017 40.000 0.00 0.00 34.60 3.16
1743 1804 5.659079 TGTTTGTTTTCAGGGACTTATTGGT 59.341 36.000 0.00 0.00 34.60 3.67
1744 1805 6.155393 TGTTTGTTTTCAGGGACTTATTGGTT 59.845 34.615 0.00 0.00 34.60 3.67
1745 1806 6.800072 TTGTTTTCAGGGACTTATTGGTTT 57.200 33.333 0.00 0.00 34.60 3.27
1746 1807 7.899648 TTGTTTTCAGGGACTTATTGGTTTA 57.100 32.000 0.00 0.00 34.60 2.01
1747 1808 7.519032 TGTTTTCAGGGACTTATTGGTTTAG 57.481 36.000 0.00 0.00 34.60 1.85
1748 1809 6.492087 TGTTTTCAGGGACTTATTGGTTTAGG 59.508 38.462 0.00 0.00 34.60 2.69
1749 1810 4.855298 TCAGGGACTTATTGGTTTAGGG 57.145 45.455 0.00 0.00 34.60 3.53
1750 1811 4.440808 TCAGGGACTTATTGGTTTAGGGA 58.559 43.478 0.00 0.00 34.60 4.20
1751 1812 4.226620 TCAGGGACTTATTGGTTTAGGGAC 59.773 45.833 0.00 0.00 34.60 4.46
1752 1813 4.227527 CAGGGACTTATTGGTTTAGGGACT 59.772 45.833 0.00 0.00 39.39 3.85
1753 1814 4.856182 AGGGACTTATTGGTTTAGGGACTT 59.144 41.667 0.00 0.00 34.75 3.01
1754 1815 6.034003 AGGGACTTATTGGTTTAGGGACTTA 58.966 40.000 0.00 0.00 34.75 2.24
1755 1816 6.506413 AGGGACTTATTGGTTTAGGGACTTAA 59.494 38.462 0.00 0.00 34.75 1.85
1756 1817 7.018851 AGGGACTTATTGGTTTAGGGACTTAAA 59.981 37.037 0.00 0.00 34.75 1.52
1757 1818 7.670979 GGGACTTATTGGTTTAGGGACTTAAAA 59.329 37.037 0.00 0.00 41.75 1.52
1758 1819 9.081204 GGACTTATTGGTTTAGGGACTTAAAAA 57.919 33.333 0.00 0.00 41.75 1.94
1778 1839 6.910259 AAAAAGTCCCTATAAGTCCCATCT 57.090 37.500 0.00 0.00 0.00 2.90
1780 1841 8.401955 AAAAAGTCCCTATAAGTCCCATCTAA 57.598 34.615 0.00 0.00 0.00 2.10
1781 1842 8.401955 AAAAGTCCCTATAAGTCCCATCTAAA 57.598 34.615 0.00 0.00 0.00 1.85
1782 1843 6.997942 AGTCCCTATAAGTCCCATCTAAAC 57.002 41.667 0.00 0.00 0.00 2.01
1783 1844 5.845065 AGTCCCTATAAGTCCCATCTAAACC 59.155 44.000 0.00 0.00 0.00 3.27
1784 1845 5.605488 GTCCCTATAAGTCCCATCTAAACCA 59.395 44.000 0.00 0.00 0.00 3.67
1785 1846 6.100714 GTCCCTATAAGTCCCATCTAAACCAA 59.899 42.308 0.00 0.00 0.00 3.67
1786 1847 6.679303 TCCCTATAAGTCCCATCTAAACCAAA 59.321 38.462 0.00 0.00 0.00 3.28
1787 1848 6.771267 CCCTATAAGTCCCATCTAAACCAAAC 59.229 42.308 0.00 0.00 0.00 2.93
1788 1849 7.343357 CCTATAAGTCCCATCTAAACCAAACA 58.657 38.462 0.00 0.00 0.00 2.83
1789 1850 7.499232 CCTATAAGTCCCATCTAAACCAAACAG 59.501 40.741 0.00 0.00 0.00 3.16
1790 1851 4.034285 AGTCCCATCTAAACCAAACAGG 57.966 45.455 0.00 0.00 45.67 4.00
1791 1852 3.655777 AGTCCCATCTAAACCAAACAGGA 59.344 43.478 0.00 0.00 41.22 3.86
1792 1853 4.010349 GTCCCATCTAAACCAAACAGGAG 58.990 47.826 0.00 0.00 41.22 3.69
1793 1854 3.913799 TCCCATCTAAACCAAACAGGAGA 59.086 43.478 0.00 0.00 41.22 3.71
1794 1855 4.019321 TCCCATCTAAACCAAACAGGAGAG 60.019 45.833 0.00 0.00 41.22 3.20
1795 1856 4.019321 CCCATCTAAACCAAACAGGAGAGA 60.019 45.833 0.00 0.00 41.22 3.10
1796 1857 4.938226 CCATCTAAACCAAACAGGAGAGAC 59.062 45.833 0.00 0.00 41.22 3.36
1797 1858 5.280215 CCATCTAAACCAAACAGGAGAGACT 60.280 44.000 0.00 0.00 41.22 3.24
1798 1859 5.888982 TCTAAACCAAACAGGAGAGACTT 57.111 39.130 0.00 0.00 41.22 3.01
1799 1860 6.989155 TCTAAACCAAACAGGAGAGACTTA 57.011 37.500 0.00 0.00 41.22 2.24
1800 1861 7.554959 TCTAAACCAAACAGGAGAGACTTAT 57.445 36.000 0.00 0.00 41.22 1.73
1801 1862 8.660295 TCTAAACCAAACAGGAGAGACTTATA 57.340 34.615 0.00 0.00 41.22 0.98
1802 1863 8.750298 TCTAAACCAAACAGGAGAGACTTATAG 58.250 37.037 0.00 0.00 41.22 1.31
1803 1864 5.941555 ACCAAACAGGAGAGACTTATAGG 57.058 43.478 0.00 0.00 41.22 2.57
1804 1865 4.717280 ACCAAACAGGAGAGACTTATAGGG 59.283 45.833 0.00 0.00 41.22 3.53
1805 1866 4.962995 CCAAACAGGAGAGACTTATAGGGA 59.037 45.833 0.00 0.00 41.22 4.20
1806 1867 5.163395 CCAAACAGGAGAGACTTATAGGGAC 60.163 48.000 0.00 0.00 41.22 4.46
1807 1868 5.475398 AACAGGAGAGACTTATAGGGACT 57.525 43.478 0.00 0.00 46.37 3.85
1808 1869 5.475398 ACAGGAGAGACTTATAGGGACTT 57.525 43.478 0.00 0.00 41.75 3.01
1809 1870 6.593759 ACAGGAGAGACTTATAGGGACTTA 57.406 41.667 0.00 0.00 41.75 2.24
1810 1871 6.982899 ACAGGAGAGACTTATAGGGACTTAA 58.017 40.000 0.00 0.00 41.75 1.85
1811 1872 7.420029 ACAGGAGAGACTTATAGGGACTTAAA 58.580 38.462 0.00 0.00 41.75 1.52
1812 1873 7.562088 ACAGGAGAGACTTATAGGGACTTAAAG 59.438 40.741 0.00 0.00 41.75 1.85
1813 1874 7.562088 CAGGAGAGACTTATAGGGACTTAAAGT 59.438 40.741 0.00 0.00 42.31 2.66
1814 1875 7.562088 AGGAGAGACTTATAGGGACTTAAAGTG 59.438 40.741 0.00 0.00 40.60 3.16
1815 1876 7.201929 GGAGAGACTTATAGGGACTTAAAGTGG 60.202 44.444 0.00 0.00 40.60 4.00
1816 1877 6.612049 AGAGACTTATAGGGACTTAAAGTGGG 59.388 42.308 0.00 0.00 40.60 4.61
1817 1878 5.130643 AGACTTATAGGGACTTAAAGTGGGC 59.869 44.000 0.00 0.00 40.60 5.36
1818 1879 4.786454 ACTTATAGGGACTTAAAGTGGGCA 59.214 41.667 0.00 0.00 39.58 5.36
1819 1880 5.432060 ACTTATAGGGACTTAAAGTGGGCAT 59.568 40.000 0.00 0.00 39.58 4.40
1820 1881 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
1821 1882 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
1822 1883 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
1823 1884 3.161866 GGGACTTAAAGTGGGCATTTGA 58.838 45.455 0.00 0.00 0.00 2.69
1824 1885 3.193479 GGGACTTAAAGTGGGCATTTGAG 59.807 47.826 0.00 0.00 31.53 3.02
1825 1886 4.079253 GGACTTAAAGTGGGCATTTGAGA 58.921 43.478 7.52 0.00 30.26 3.27
1826 1887 4.082733 GGACTTAAAGTGGGCATTTGAGAC 60.083 45.833 7.52 2.89 30.26 3.36
1827 1888 4.729868 ACTTAAAGTGGGCATTTGAGACT 58.270 39.130 7.52 0.00 30.26 3.24
1828 1889 5.140454 ACTTAAAGTGGGCATTTGAGACTT 58.860 37.500 7.52 0.00 30.26 3.01
1829 1890 6.303839 ACTTAAAGTGGGCATTTGAGACTTA 58.696 36.000 7.52 0.00 30.26 2.24
1830 1891 6.948309 ACTTAAAGTGGGCATTTGAGACTTAT 59.052 34.615 7.52 0.00 30.26 1.73
1831 1892 5.649782 AAAGTGGGCATTTGAGACTTATG 57.350 39.130 0.00 0.00 0.00 1.90
1832 1893 4.574674 AGTGGGCATTTGAGACTTATGA 57.425 40.909 0.00 0.00 0.00 2.15
1833 1894 4.922206 AGTGGGCATTTGAGACTTATGAA 58.078 39.130 0.00 0.00 0.00 2.57
1834 1895 5.324409 AGTGGGCATTTGAGACTTATGAAA 58.676 37.500 0.00 0.00 0.00 2.69
1835 1896 5.954150 AGTGGGCATTTGAGACTTATGAAAT 59.046 36.000 0.00 0.00 0.00 2.17
1836 1897 7.118723 AGTGGGCATTTGAGACTTATGAAATA 58.881 34.615 0.00 0.00 0.00 1.40
1837 1898 7.615365 AGTGGGCATTTGAGACTTATGAAATAA 59.385 33.333 0.00 0.00 36.20 1.40
1863 1924 9.261035 AGACTCTCAAGAAAAGTCTTATATGGA 57.739 33.333 8.29 0.00 45.69 3.41
1864 1925 9.308318 GACTCTCAAGAAAAGTCTTATATGGAC 57.692 37.037 0.00 3.42 42.45 4.02
1865 1926 9.041354 ACTCTCAAGAAAAGTCTTATATGGACT 57.959 33.333 7.18 7.18 42.45 3.85
1883 1944 9.998106 ATATGGACTTATAGTTGTAATGTGGTC 57.002 33.333 0.00 0.00 0.00 4.02
1884 1945 7.490657 TGGACTTATAGTTGTAATGTGGTCT 57.509 36.000 0.00 0.00 0.00 3.85
1885 1946 7.913789 TGGACTTATAGTTGTAATGTGGTCTT 58.086 34.615 0.00 0.00 0.00 3.01
1886 1947 9.038072 TGGACTTATAGTTGTAATGTGGTCTTA 57.962 33.333 0.00 0.00 0.00 2.10
1892 1953 8.792830 ATAGTTGTAATGTGGTCTTATAGGGA 57.207 34.615 0.00 0.00 0.00 4.20
1893 1954 6.885922 AGTTGTAATGTGGTCTTATAGGGAC 58.114 40.000 0.00 0.00 0.00 4.46
1894 1955 6.672657 AGTTGTAATGTGGTCTTATAGGGACT 59.327 38.462 7.52 0.00 46.37 3.85
1895 1956 7.182206 AGTTGTAATGTGGTCTTATAGGGACTT 59.818 37.037 7.52 0.00 41.75 3.01
1896 1957 8.480501 GTTGTAATGTGGTCTTATAGGGACTTA 58.519 37.037 7.52 0.00 41.75 2.24
1897 1958 8.792830 TGTAATGTGGTCTTATAGGGACTTAT 57.207 34.615 7.52 0.00 41.75 1.73
1898 1959 9.886337 TGTAATGTGGTCTTATAGGGACTTATA 57.114 33.333 7.52 0.00 41.75 0.98
1901 1962 9.448587 AATGTGGTCTTATAGGGACTTATAAGT 57.551 33.333 18.05 18.05 43.16 2.24
1914 1975 5.853572 ACTTATAAGTCCCAGGAACCAAA 57.146 39.130 12.50 0.00 32.86 3.28
1915 1976 5.567430 ACTTATAAGTCCCAGGAACCAAAC 58.433 41.667 12.50 0.00 32.86 2.93
1916 1977 5.073965 ACTTATAAGTCCCAGGAACCAAACA 59.926 40.000 12.50 0.00 32.86 2.83
1917 1978 2.838637 AAGTCCCAGGAACCAAACAA 57.161 45.000 0.00 0.00 0.00 2.83
1918 1979 2.364972 AGTCCCAGGAACCAAACAAG 57.635 50.000 0.00 0.00 0.00 3.16
1919 1980 1.569072 AGTCCCAGGAACCAAACAAGT 59.431 47.619 0.00 0.00 0.00 3.16
1920 1981 2.781174 AGTCCCAGGAACCAAACAAGTA 59.219 45.455 0.00 0.00 0.00 2.24
1921 1982 3.146847 GTCCCAGGAACCAAACAAGTAG 58.853 50.000 0.00 0.00 0.00 2.57
1922 1983 2.107552 TCCCAGGAACCAAACAAGTAGG 59.892 50.000 0.00 0.00 0.00 3.18
1923 1984 2.514803 CCAGGAACCAAACAAGTAGGG 58.485 52.381 0.00 0.00 0.00 3.53
1924 1985 2.107552 CCAGGAACCAAACAAGTAGGGA 59.892 50.000 0.00 0.00 0.00 4.20
1925 1986 3.146847 CAGGAACCAAACAAGTAGGGAC 58.853 50.000 0.00 0.00 0.00 4.46
1926 1987 3.053826 AGGAACCAAACAAGTAGGGACT 58.946 45.455 0.00 0.00 46.37 3.85
1928 1989 4.079385 AGGAACCAAACAAGTAGGGACTTT 60.079 41.667 0.00 0.00 43.70 2.66
1929 1990 4.647853 GGAACCAAACAAGTAGGGACTTTT 59.352 41.667 0.00 0.00 43.70 2.27
1930 1991 5.128171 GGAACCAAACAAGTAGGGACTTTTT 59.872 40.000 0.00 0.00 43.70 1.94
1931 1992 6.321945 GGAACCAAACAAGTAGGGACTTTTTA 59.678 38.462 0.00 0.00 43.70 1.52
1932 1993 6.954487 ACCAAACAAGTAGGGACTTTTTAG 57.046 37.500 0.00 0.00 43.70 1.85
1933 1994 6.665695 ACCAAACAAGTAGGGACTTTTTAGA 58.334 36.000 0.00 0.00 43.70 2.10
1934 1995 6.771267 ACCAAACAAGTAGGGACTTTTTAGAG 59.229 38.462 0.00 0.00 43.70 2.43
1935 1996 6.996282 CCAAACAAGTAGGGACTTTTTAGAGA 59.004 38.462 0.00 0.00 43.70 3.10
1936 1997 7.041303 CCAAACAAGTAGGGACTTTTTAGAGAC 60.041 40.741 0.00 0.00 43.70 3.36
1937 1998 6.997942 ACAAGTAGGGACTTTTTAGAGACT 57.002 37.500 0.00 0.00 43.70 3.24
1938 1999 7.376335 ACAAGTAGGGACTTTTTAGAGACTT 57.624 36.000 0.00 0.00 43.70 3.01
1939 2000 7.217906 ACAAGTAGGGACTTTTTAGAGACTTG 58.782 38.462 8.88 8.88 43.70 3.16
1940 2001 6.997942 AGTAGGGACTTTTTAGAGACTTGT 57.002 37.500 0.00 0.00 41.75 3.16
1941 2002 6.760291 AGTAGGGACTTTTTAGAGACTTGTG 58.240 40.000 0.00 0.00 41.75 3.33
1942 2003 5.888982 AGGGACTTTTTAGAGACTTGTGA 57.111 39.130 0.00 0.00 27.25 3.58
1943 2004 5.612351 AGGGACTTTTTAGAGACTTGTGAC 58.388 41.667 0.00 0.00 27.25 3.67
1944 2005 5.367060 AGGGACTTTTTAGAGACTTGTGACT 59.633 40.000 0.00 0.00 27.25 3.41
1945 2006 6.056236 GGGACTTTTTAGAGACTTGTGACTT 58.944 40.000 0.00 0.00 0.00 3.01
1946 2007 6.017852 GGGACTTTTTAGAGACTTGTGACTTG 60.018 42.308 0.00 0.00 0.00 3.16
1947 2008 6.539103 GGACTTTTTAGAGACTTGTGACTTGT 59.461 38.462 0.00 0.00 0.00 3.16
1948 2009 7.709613 GGACTTTTTAGAGACTTGTGACTTGTA 59.290 37.037 0.00 0.00 0.00 2.41
1949 2010 9.095065 GACTTTTTAGAGACTTGTGACTTGTAA 57.905 33.333 0.00 0.00 0.00 2.41
1950 2011 9.099454 ACTTTTTAGAGACTTGTGACTTGTAAG 57.901 33.333 0.00 0.00 0.00 2.34
1951 2012 9.099454 CTTTTTAGAGACTTGTGACTTGTAAGT 57.901 33.333 0.00 0.00 43.16 2.24
1952 2013 9.444600 TTTTTAGAGACTTGTGACTTGTAAGTT 57.555 29.630 0.00 0.00 39.88 2.66
1953 2014 8.420374 TTTAGAGACTTGTGACTTGTAAGTTG 57.580 34.615 0.00 0.00 39.88 3.16
1954 2015 5.360591 AGAGACTTGTGACTTGTAAGTTGG 58.639 41.667 0.00 0.00 39.88 3.77
1955 2016 4.451900 AGACTTGTGACTTGTAAGTTGGG 58.548 43.478 0.00 0.00 39.88 4.12
1956 2017 4.163458 AGACTTGTGACTTGTAAGTTGGGA 59.837 41.667 0.00 0.00 39.88 4.37
1957 2018 4.196971 ACTTGTGACTTGTAAGTTGGGAC 58.803 43.478 0.00 0.00 39.88 4.46
1958 2019 4.080526 ACTTGTGACTTGTAAGTTGGGACT 60.081 41.667 0.00 0.00 39.88 3.85
1959 2020 5.129815 ACTTGTGACTTGTAAGTTGGGACTA 59.870 40.000 0.00 0.00 39.88 2.59
1960 2021 5.617528 TGTGACTTGTAAGTTGGGACTAA 57.382 39.130 0.00 0.00 39.88 2.24
1961 2022 5.991861 TGTGACTTGTAAGTTGGGACTAAA 58.008 37.500 0.00 0.00 39.88 1.85
1962 2023 6.416415 TGTGACTTGTAAGTTGGGACTAAAA 58.584 36.000 0.00 0.00 39.88 1.52
1963 2024 6.885376 TGTGACTTGTAAGTTGGGACTAAAAA 59.115 34.615 0.00 0.00 39.88 1.94
1989 2050 5.801380 GTCCTAGGACTTATGAACCAAACA 58.199 41.667 31.12 0.00 41.57 2.83
1990 2051 5.875359 GTCCTAGGACTTATGAACCAAACAG 59.125 44.000 31.12 0.00 41.57 3.16
1991 2052 5.045869 TCCTAGGACTTATGAACCAAACAGG 60.046 44.000 7.62 0.00 45.67 4.00
1992 2053 4.034285 AGGACTTATGAACCAAACAGGG 57.966 45.455 0.00 0.00 43.89 4.45
1993 2054 2.492088 GGACTTATGAACCAAACAGGGC 59.508 50.000 0.00 0.00 43.89 5.19
1994 2055 2.492088 GACTTATGAACCAAACAGGGCC 59.508 50.000 0.00 0.00 43.89 5.80
1995 2056 2.110011 ACTTATGAACCAAACAGGGCCT 59.890 45.455 0.00 0.00 43.89 5.19
1996 2057 2.214376 TATGAACCAAACAGGGCCTG 57.786 50.000 31.62 31.62 43.89 4.85
1997 2058 0.482446 ATGAACCAAACAGGGCCTGA 59.518 50.000 38.99 15.25 43.89 3.86
1998 2059 0.178992 TGAACCAAACAGGGCCTGAG 60.179 55.000 38.99 25.46 43.89 3.35
1999 2060 0.895559 GAACCAAACAGGGCCTGAGG 60.896 60.000 38.99 33.22 43.89 3.86
2000 2061 1.655114 AACCAAACAGGGCCTGAGGT 61.655 55.000 38.99 33.82 43.89 3.85
2001 2062 1.303643 CCAAACAGGGCCTGAGGTC 60.304 63.158 38.99 0.00 35.18 3.85
2008 2069 2.686106 GGCCTGAGGTCCCCGTTA 60.686 66.667 0.00 0.00 0.00 3.18
2009 2070 2.070650 GGCCTGAGGTCCCCGTTAT 61.071 63.158 0.00 0.00 0.00 1.89
2010 2071 1.446366 GCCTGAGGTCCCCGTTATC 59.554 63.158 0.00 0.00 0.00 1.75
2011 2072 1.740285 CCTGAGGTCCCCGTTATCG 59.260 63.158 0.00 0.00 0.00 2.92
2012 2073 1.041447 CCTGAGGTCCCCGTTATCGT 61.041 60.000 0.00 0.00 35.01 3.73
2016 2077 0.978907 AGGTCCCCGTTATCGTTTGT 59.021 50.000 0.00 0.00 35.01 2.83
2023 2084 3.995705 CCCCGTTATCGTTTGTAAACTCA 59.004 43.478 6.00 0.00 36.77 3.41
2028 2089 7.360607 CCCGTTATCGTTTGTAAACTCAATCTT 60.361 37.037 6.00 0.00 36.77 2.40
2070 3318 4.016706 CCACGTGTCCCACCTCCC 62.017 72.222 15.65 0.00 0.00 4.30
2099 3347 0.902516 ATATCTGCTCCTCCGCTCCC 60.903 60.000 0.00 0.00 0.00 4.30
2120 3368 2.202676 GTGGCTTCTCTCGGCTCG 60.203 66.667 0.00 0.00 0.00 5.03
2126 3374 0.243907 CTTCTCTCGGCTCGGAAACA 59.756 55.000 0.00 0.00 0.00 2.83
2129 3377 0.790814 CTCTCGGCTCGGAAACAAAC 59.209 55.000 0.00 0.00 0.00 2.93
2220 3484 2.649190 GGCATCCCTTTCCTTTCTCTC 58.351 52.381 0.00 0.00 0.00 3.20
2297 3580 4.587189 CCCGATCCCGAGCGAACC 62.587 72.222 3.55 0.00 43.75 3.62
2298 3581 4.587189 CCGATCCCGAGCGAACCC 62.587 72.222 3.55 0.00 43.75 4.11
2299 3582 4.925576 CGATCCCGAGCGAACCCG 62.926 72.222 0.00 0.00 43.75 5.28
2300 3583 3.834799 GATCCCGAGCGAACCCGT 61.835 66.667 0.00 0.00 38.24 5.28
2301 3584 2.440796 ATCCCGAGCGAACCCGTA 60.441 61.111 0.00 0.00 38.24 4.02
2302 3585 1.803366 GATCCCGAGCGAACCCGTAT 61.803 60.000 0.00 0.00 38.24 3.06
2303 3586 1.803366 ATCCCGAGCGAACCCGTATC 61.803 60.000 0.00 0.00 38.24 2.24
2304 3587 2.777972 CCCGAGCGAACCCGTATCA 61.778 63.158 0.00 0.00 38.24 2.15
2305 3588 1.140161 CCGAGCGAACCCGTATCAA 59.860 57.895 0.00 0.00 38.24 2.57
2306 3589 0.870307 CCGAGCGAACCCGTATCAAG 60.870 60.000 0.00 0.00 38.24 3.02
2307 3590 0.179145 CGAGCGAACCCGTATCAAGT 60.179 55.000 0.00 0.00 38.24 3.16
2308 3591 1.064505 CGAGCGAACCCGTATCAAGTA 59.935 52.381 0.00 0.00 38.24 2.24
2309 3592 2.728922 GAGCGAACCCGTATCAAGTAG 58.271 52.381 0.00 0.00 38.24 2.57
2310 3593 1.407979 AGCGAACCCGTATCAAGTAGG 59.592 52.381 0.00 0.00 38.24 3.18
2311 3594 1.135721 GCGAACCCGTATCAAGTAGGT 59.864 52.381 0.00 0.00 38.24 3.08
2312 3595 2.805845 CGAACCCGTATCAAGTAGGTG 58.194 52.381 0.00 0.00 0.00 4.00
2313 3596 2.480759 CGAACCCGTATCAAGTAGGTGG 60.481 54.545 0.00 0.00 0.00 4.61
2314 3597 0.828677 ACCCGTATCAAGTAGGTGGC 59.171 55.000 0.00 0.00 0.00 5.01
2315 3598 1.120530 CCCGTATCAAGTAGGTGGCT 58.879 55.000 0.00 0.00 0.00 4.75
2316 3599 1.485066 CCCGTATCAAGTAGGTGGCTT 59.515 52.381 0.00 0.00 0.00 4.35
2317 3600 2.483188 CCCGTATCAAGTAGGTGGCTTC 60.483 54.545 0.00 0.00 0.00 3.86
2318 3601 2.483188 CCGTATCAAGTAGGTGGCTTCC 60.483 54.545 0.00 0.00 0.00 3.46
2319 3602 2.431057 CGTATCAAGTAGGTGGCTTCCT 59.569 50.000 6.97 6.97 41.20 3.36
2320 3603 3.491104 CGTATCAAGTAGGTGGCTTCCTC 60.491 52.174 5.20 0.00 38.86 3.71
2321 3604 2.024176 TCAAGTAGGTGGCTTCCTCA 57.976 50.000 5.20 0.00 38.86 3.86
2322 3605 2.334977 TCAAGTAGGTGGCTTCCTCAA 58.665 47.619 5.20 0.00 38.86 3.02
2323 3606 2.708861 TCAAGTAGGTGGCTTCCTCAAA 59.291 45.455 5.20 0.00 38.86 2.69
2324 3607 3.330701 TCAAGTAGGTGGCTTCCTCAAAT 59.669 43.478 5.20 0.00 38.86 2.32
2325 3608 3.356529 AGTAGGTGGCTTCCTCAAATG 57.643 47.619 5.20 0.00 38.86 2.32
2326 3609 2.912956 AGTAGGTGGCTTCCTCAAATGA 59.087 45.455 5.20 0.00 38.86 2.57
2327 3610 3.525199 AGTAGGTGGCTTCCTCAAATGAT 59.475 43.478 5.20 0.00 38.86 2.45
2328 3611 3.463048 AGGTGGCTTCCTCAAATGATT 57.537 42.857 0.00 0.00 31.32 2.57
2329 3612 3.094572 AGGTGGCTTCCTCAAATGATTG 58.905 45.455 0.00 0.00 37.92 2.67
2330 3613 3.091545 GGTGGCTTCCTCAAATGATTGA 58.908 45.455 0.00 0.00 43.18 2.57
2331 3614 3.703052 GGTGGCTTCCTCAAATGATTGAT 59.297 43.478 0.00 0.00 44.29 2.57
2332 3615 4.441079 GGTGGCTTCCTCAAATGATTGATG 60.441 45.833 0.00 0.00 44.29 3.07
2333 3616 3.702548 TGGCTTCCTCAAATGATTGATGG 59.297 43.478 0.00 0.00 44.29 3.51
2334 3617 3.492137 GGCTTCCTCAAATGATTGATGGC 60.492 47.826 0.00 6.71 44.29 4.40
2335 3618 3.492137 GCTTCCTCAAATGATTGATGGCC 60.492 47.826 0.00 0.00 44.29 5.36
2336 3619 3.675348 TCCTCAAATGATTGATGGCCT 57.325 42.857 3.32 0.00 44.29 5.19
2337 3620 3.559069 TCCTCAAATGATTGATGGCCTC 58.441 45.455 3.32 0.00 44.29 4.70
2338 3621 2.292569 CCTCAAATGATTGATGGCCTCG 59.707 50.000 3.32 0.00 44.29 4.63
2339 3622 1.677576 TCAAATGATTGATGGCCTCGC 59.322 47.619 3.32 0.00 40.59 5.03
2340 3623 1.269413 CAAATGATTGATGGCCTCGCC 60.269 52.381 3.32 0.00 43.45 5.54
2360 3643 3.984186 CTCGCCCCCTCCTTCTCCA 62.984 68.421 0.00 0.00 0.00 3.86
2420 3703 0.244721 GCATCTCACCCAAAACTGGC 59.755 55.000 0.00 0.00 0.00 4.85
2436 3719 0.553862 TGGCAATCCCCCTCCCTAAA 60.554 55.000 0.00 0.00 0.00 1.85
2450 3733 2.176045 CCCTAAACACCCCAATTGACC 58.824 52.381 7.12 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 62 2.233271 CCGGCTATGCATCAAAGGAAT 58.767 47.619 0.19 0.00 0.00 3.01
243 249 3.691575 TCAGGTTGCCCGATAAAAATCA 58.308 40.909 0.00 0.00 35.12 2.57
444 489 5.453762 CCATAGCAGACATTACACCATCTGA 60.454 44.000 4.33 0.00 40.92 3.27
534 579 1.792949 GACCGTCACAAGCACAGTAAG 59.207 52.381 0.00 0.00 0.00 2.34
623 670 5.509498 TGTAGCCAAGCCATTTAATCTCTT 58.491 37.500 0.00 0.00 0.00 2.85
637 684 4.309933 TCTCGATGCATAATGTAGCCAAG 58.690 43.478 0.00 0.00 0.00 3.61
877 929 2.172679 GGGCGAACTAAAAATTGGGGA 58.827 47.619 0.00 0.00 0.00 4.81
1066 1118 0.321564 TTGTTGATCACCGGAGCCAG 60.322 55.000 9.46 0.00 0.00 4.85
1122 1183 1.227823 CAGGAGGTTGTTGGCGTCA 60.228 57.895 0.00 0.00 0.00 4.35
1138 1199 2.581354 CCCGAGACCAGCCTTCAG 59.419 66.667 0.00 0.00 0.00 3.02
1140 1201 3.394836 AGCCCGAGACCAGCCTTC 61.395 66.667 0.00 0.00 0.00 3.46
1156 1217 2.294078 GGTGGGGACTCAGGACCAG 61.294 68.421 0.00 0.00 32.84 4.00
1192 1253 1.016653 GGCGACAGCTTCTGGAAGAC 61.017 60.000 13.74 5.79 41.44 3.01
1200 1261 3.291101 TACCCACGGCGACAGCTTC 62.291 63.158 16.62 0.00 44.37 3.86
1218 1279 0.895530 CATGGACGTACAGACTGGGT 59.104 55.000 6.62 1.54 0.00 4.51
1236 1297 0.602638 GGCACACGATGTCCTTGTCA 60.603 55.000 0.00 0.00 0.00 3.58
1251 1312 1.095807 GGTCGATAAAGCCCTGGCAC 61.096 60.000 11.38 0.00 44.88 5.01
1296 1357 0.809385 CGAGACCGTGGAAGCTCTTA 59.191 55.000 0.00 0.00 0.00 2.10
1300 1361 4.070552 GGCGAGACCGTGGAAGCT 62.071 66.667 0.00 0.00 38.24 3.74
1589 1650 9.926751 CAACAACATATCTTGTGCTAAATCTAG 57.073 33.333 0.00 0.00 38.99 2.43
1590 1651 8.397906 GCAACAACATATCTTGTGCTAAATCTA 58.602 33.333 0.00 0.00 38.99 1.98
1591 1652 7.253422 GCAACAACATATCTTGTGCTAAATCT 58.747 34.615 0.00 0.00 38.99 2.40
1592 1653 6.195244 CGCAACAACATATCTTGTGCTAAATC 59.805 38.462 12.60 0.00 38.99 2.17
1593 1654 6.029607 CGCAACAACATATCTTGTGCTAAAT 58.970 36.000 12.60 0.00 38.99 1.40
1594 1655 5.049060 ACGCAACAACATATCTTGTGCTAAA 60.049 36.000 12.60 0.00 38.99 1.85
1595 1656 4.454161 ACGCAACAACATATCTTGTGCTAA 59.546 37.500 12.60 0.00 38.99 3.09
1596 1657 4.000325 ACGCAACAACATATCTTGTGCTA 59.000 39.130 12.60 0.00 38.99 3.49
1597 1658 2.813754 ACGCAACAACATATCTTGTGCT 59.186 40.909 12.60 3.03 38.99 4.40
1598 1659 2.910482 CACGCAACAACATATCTTGTGC 59.090 45.455 0.00 3.44 38.99 4.57
1599 1660 4.403015 TCACGCAACAACATATCTTGTG 57.597 40.909 0.00 0.00 38.99 3.33
1600 1661 4.201714 CGATCACGCAACAACATATCTTGT 60.202 41.667 0.00 0.00 41.53 3.16
1601 1662 4.266157 CGATCACGCAACAACATATCTTG 58.734 43.478 0.00 0.00 0.00 3.02
1602 1663 4.520743 CGATCACGCAACAACATATCTT 57.479 40.909 0.00 0.00 0.00 2.40
1625 1686 3.167485 TGATTGCCAGGCAGAAATTTCT 58.833 40.909 15.50 15.11 40.61 2.52
1626 1687 3.598019 TGATTGCCAGGCAGAAATTTC 57.402 42.857 15.50 10.33 40.61 2.17
1627 1688 4.020039 TGAATGATTGCCAGGCAGAAATTT 60.020 37.500 15.50 6.33 40.61 1.82
1628 1689 3.516300 TGAATGATTGCCAGGCAGAAATT 59.484 39.130 15.50 14.79 40.61 1.82
1629 1690 3.101437 TGAATGATTGCCAGGCAGAAAT 58.899 40.909 15.50 5.37 40.61 2.17
1630 1691 2.527497 TGAATGATTGCCAGGCAGAAA 58.473 42.857 15.50 0.00 40.61 2.52
1631 1692 2.219080 TGAATGATTGCCAGGCAGAA 57.781 45.000 15.50 0.04 40.61 3.02
1632 1693 2.219080 TTGAATGATTGCCAGGCAGA 57.781 45.000 15.50 6.50 40.61 4.26
1633 1694 2.232941 ACTTTGAATGATTGCCAGGCAG 59.767 45.455 15.50 0.96 40.61 4.85
1634 1695 2.028839 CACTTTGAATGATTGCCAGGCA 60.029 45.455 11.22 11.22 36.47 4.75
1635 1696 2.028748 ACACTTTGAATGATTGCCAGGC 60.029 45.455 3.66 3.66 0.00 4.85
1636 1697 3.947910 ACACTTTGAATGATTGCCAGG 57.052 42.857 0.00 0.00 0.00 4.45
1637 1698 4.084223 GCAAACACTTTGAATGATTGCCAG 60.084 41.667 8.32 0.00 45.18 4.85
1638 1699 3.808726 GCAAACACTTTGAATGATTGCCA 59.191 39.130 8.32 0.00 45.18 4.92
1639 1700 4.394099 GCAAACACTTTGAATGATTGCC 57.606 40.909 8.32 0.00 45.18 4.52
1641 1702 5.051816 ACCAGCAAACACTTTGAATGATTG 58.948 37.500 0.00 0.00 43.26 2.67
1642 1703 5.280654 ACCAGCAAACACTTTGAATGATT 57.719 34.783 0.00 0.00 43.26 2.57
1643 1704 4.942761 ACCAGCAAACACTTTGAATGAT 57.057 36.364 0.00 0.00 43.26 2.45
1644 1705 4.431809 CAACCAGCAAACACTTTGAATGA 58.568 39.130 0.00 0.00 43.26 2.57
1645 1706 3.556775 CCAACCAGCAAACACTTTGAATG 59.443 43.478 0.00 0.00 43.26 2.67
1646 1707 3.450457 TCCAACCAGCAAACACTTTGAAT 59.550 39.130 0.00 0.00 43.26 2.57
1647 1708 2.828520 TCCAACCAGCAAACACTTTGAA 59.171 40.909 0.00 0.00 43.26 2.69
1648 1709 2.165437 GTCCAACCAGCAAACACTTTGA 59.835 45.455 0.00 0.00 43.26 2.69
1649 1710 2.094286 TGTCCAACCAGCAAACACTTTG 60.094 45.455 0.00 0.00 43.44 2.77
1650 1711 2.166254 CTGTCCAACCAGCAAACACTTT 59.834 45.455 0.00 0.00 0.00 2.66
1651 1712 1.750778 CTGTCCAACCAGCAAACACTT 59.249 47.619 0.00 0.00 0.00 3.16
1652 1713 1.064758 TCTGTCCAACCAGCAAACACT 60.065 47.619 0.00 0.00 32.32 3.55
1653 1714 1.065551 GTCTGTCCAACCAGCAAACAC 59.934 52.381 0.00 0.00 32.32 3.32
1654 1715 1.388547 GTCTGTCCAACCAGCAAACA 58.611 50.000 0.00 0.00 32.32 2.83
1655 1716 0.668535 GGTCTGTCCAACCAGCAAAC 59.331 55.000 0.00 0.00 36.75 2.93
1656 1717 0.550914 AGGTCTGTCCAACCAGCAAA 59.449 50.000 0.00 0.00 39.39 3.68
1657 1718 0.550914 AAGGTCTGTCCAACCAGCAA 59.449 50.000 0.00 0.00 39.39 3.91
1658 1719 0.179020 CAAGGTCTGTCCAACCAGCA 60.179 55.000 0.00 0.00 39.39 4.41
1659 1720 0.890996 CCAAGGTCTGTCCAACCAGC 60.891 60.000 0.00 0.00 39.39 4.85
1660 1721 0.474184 ACCAAGGTCTGTCCAACCAG 59.526 55.000 0.00 0.00 39.39 4.00
1661 1722 1.418637 GTACCAAGGTCTGTCCAACCA 59.581 52.381 0.00 0.00 39.39 3.67
1662 1723 1.271217 GGTACCAAGGTCTGTCCAACC 60.271 57.143 7.15 0.00 39.02 3.77
1663 1724 1.697982 AGGTACCAAGGTCTGTCCAAC 59.302 52.381 15.94 0.00 39.02 3.77
1664 1725 2.112279 AGGTACCAAGGTCTGTCCAA 57.888 50.000 15.94 0.00 39.02 3.53
1665 1726 2.112279 AAGGTACCAAGGTCTGTCCA 57.888 50.000 15.94 0.00 39.02 4.02
1666 1727 4.838904 AATAAGGTACCAAGGTCTGTCC 57.161 45.455 15.94 0.00 0.00 4.02
1667 1728 6.154021 TGAGTAATAAGGTACCAAGGTCTGTC 59.846 42.308 15.94 2.39 0.00 3.51
1668 1729 6.021030 TGAGTAATAAGGTACCAAGGTCTGT 58.979 40.000 15.94 0.00 0.00 3.41
1669 1730 6.540438 TGAGTAATAAGGTACCAAGGTCTG 57.460 41.667 15.94 0.00 0.00 3.51
1670 1731 5.128991 GCTGAGTAATAAGGTACCAAGGTCT 59.871 44.000 15.94 5.00 0.00 3.85
1671 1732 5.128991 AGCTGAGTAATAAGGTACCAAGGTC 59.871 44.000 15.94 1.88 0.00 3.85
1672 1733 5.030820 AGCTGAGTAATAAGGTACCAAGGT 58.969 41.667 15.94 0.00 0.00 3.50
1673 1734 5.128827 TGAGCTGAGTAATAAGGTACCAAGG 59.871 44.000 15.94 0.00 0.00 3.61
1674 1735 6.222038 TGAGCTGAGTAATAAGGTACCAAG 57.778 41.667 15.94 0.00 0.00 3.61
1675 1736 6.439375 TCTTGAGCTGAGTAATAAGGTACCAA 59.561 38.462 15.94 1.42 0.00 3.67
1676 1737 5.955959 TCTTGAGCTGAGTAATAAGGTACCA 59.044 40.000 15.94 0.00 0.00 3.25
1677 1738 6.097129 AGTCTTGAGCTGAGTAATAAGGTACC 59.903 42.308 2.73 2.73 0.00 3.34
1678 1739 7.102847 AGTCTTGAGCTGAGTAATAAGGTAC 57.897 40.000 0.00 0.00 0.00 3.34
1679 1740 8.818622 TTAGTCTTGAGCTGAGTAATAAGGTA 57.181 34.615 0.00 0.00 0.00 3.08
1680 1741 7.719871 TTAGTCTTGAGCTGAGTAATAAGGT 57.280 36.000 0.00 0.00 0.00 3.50
1681 1742 7.655328 CCATTAGTCTTGAGCTGAGTAATAAGG 59.345 40.741 10.65 7.00 37.73 2.69
1682 1743 8.200792 ACCATTAGTCTTGAGCTGAGTAATAAG 58.799 37.037 10.65 8.77 37.73 1.73
1683 1744 8.079211 ACCATTAGTCTTGAGCTGAGTAATAA 57.921 34.615 10.65 0.00 37.73 1.40
1684 1745 7.661536 ACCATTAGTCTTGAGCTGAGTAATA 57.338 36.000 10.65 0.00 37.73 0.98
1685 1746 6.552445 ACCATTAGTCTTGAGCTGAGTAAT 57.448 37.500 0.00 0.00 39.34 1.89
1686 1747 7.661536 ATACCATTAGTCTTGAGCTGAGTAA 57.338 36.000 0.00 0.00 34.90 2.24
1687 1748 7.342026 TCAATACCATTAGTCTTGAGCTGAGTA 59.658 37.037 0.00 0.00 36.84 2.59
1688 1749 6.155221 TCAATACCATTAGTCTTGAGCTGAGT 59.845 38.462 0.00 0.00 36.84 3.41
1689 1750 6.577103 TCAATACCATTAGTCTTGAGCTGAG 58.423 40.000 0.00 0.00 36.84 3.35
1690 1751 6.544928 TCAATACCATTAGTCTTGAGCTGA 57.455 37.500 0.00 0.00 36.84 4.26
1691 1752 6.841443 CTCAATACCATTAGTCTTGAGCTG 57.159 41.667 0.00 0.00 46.45 4.24
1695 1756 5.964477 ACCCTCTCAATACCATTAGTCTTGA 59.036 40.000 0.00 0.00 38.76 3.02
1696 1757 6.051717 CACCCTCTCAATACCATTAGTCTTG 58.948 44.000 0.00 0.00 34.66 3.02
1697 1758 5.726793 ACACCCTCTCAATACCATTAGTCTT 59.273 40.000 0.00 0.00 0.00 3.01
1698 1759 5.281314 ACACCCTCTCAATACCATTAGTCT 58.719 41.667 0.00 0.00 0.00 3.24
1699 1760 5.615925 ACACCCTCTCAATACCATTAGTC 57.384 43.478 0.00 0.00 0.00 2.59
1700 1761 6.180472 CAAACACCCTCTCAATACCATTAGT 58.820 40.000 0.00 0.00 0.00 2.24
1701 1762 6.180472 ACAAACACCCTCTCAATACCATTAG 58.820 40.000 0.00 0.00 0.00 1.73
1702 1763 6.134535 ACAAACACCCTCTCAATACCATTA 57.865 37.500 0.00 0.00 0.00 1.90
1703 1764 4.998051 ACAAACACCCTCTCAATACCATT 58.002 39.130 0.00 0.00 0.00 3.16
1704 1765 4.657814 ACAAACACCCTCTCAATACCAT 57.342 40.909 0.00 0.00 0.00 3.55
1705 1766 4.447138 AACAAACACCCTCTCAATACCA 57.553 40.909 0.00 0.00 0.00 3.25
1706 1767 5.300792 TGAAAACAAACACCCTCTCAATACC 59.699 40.000 0.00 0.00 0.00 2.73
1707 1768 6.385649 TGAAAACAAACACCCTCTCAATAC 57.614 37.500 0.00 0.00 0.00 1.89
1708 1769 5.534654 CCTGAAAACAAACACCCTCTCAATA 59.465 40.000 0.00 0.00 0.00 1.90
1709 1770 4.342092 CCTGAAAACAAACACCCTCTCAAT 59.658 41.667 0.00 0.00 0.00 2.57
1710 1771 3.699038 CCTGAAAACAAACACCCTCTCAA 59.301 43.478 0.00 0.00 0.00 3.02
1711 1772 3.287222 CCTGAAAACAAACACCCTCTCA 58.713 45.455 0.00 0.00 0.00 3.27
1712 1773 2.623416 CCCTGAAAACAAACACCCTCTC 59.377 50.000 0.00 0.00 0.00 3.20
1713 1774 2.243736 TCCCTGAAAACAAACACCCTCT 59.756 45.455 0.00 0.00 0.00 3.69
1714 1775 2.361119 GTCCCTGAAAACAAACACCCTC 59.639 50.000 0.00 0.00 0.00 4.30
1715 1776 2.024369 AGTCCCTGAAAACAAACACCCT 60.024 45.455 0.00 0.00 0.00 4.34
1716 1777 2.384828 AGTCCCTGAAAACAAACACCC 58.615 47.619 0.00 0.00 0.00 4.61
1717 1778 5.784578 ATAAGTCCCTGAAAACAAACACC 57.215 39.130 0.00 0.00 0.00 4.16
1718 1779 5.983118 CCAATAAGTCCCTGAAAACAAACAC 59.017 40.000 0.00 0.00 0.00 3.32
1719 1780 5.659079 ACCAATAAGTCCCTGAAAACAAACA 59.341 36.000 0.00 0.00 0.00 2.83
1720 1781 6.156748 ACCAATAAGTCCCTGAAAACAAAC 57.843 37.500 0.00 0.00 0.00 2.93
1721 1782 6.800072 AACCAATAAGTCCCTGAAAACAAA 57.200 33.333 0.00 0.00 0.00 2.83
1722 1783 6.800072 AAACCAATAAGTCCCTGAAAACAA 57.200 33.333 0.00 0.00 0.00 2.83
1723 1784 6.492087 CCTAAACCAATAAGTCCCTGAAAACA 59.508 38.462 0.00 0.00 0.00 2.83
1724 1785 6.071560 CCCTAAACCAATAAGTCCCTGAAAAC 60.072 42.308 0.00 0.00 0.00 2.43
1725 1786 6.014012 CCCTAAACCAATAAGTCCCTGAAAA 58.986 40.000 0.00 0.00 0.00 2.29
1726 1787 5.313772 TCCCTAAACCAATAAGTCCCTGAAA 59.686 40.000 0.00 0.00 0.00 2.69
1727 1788 4.853276 TCCCTAAACCAATAAGTCCCTGAA 59.147 41.667 0.00 0.00 0.00 3.02
1728 1789 4.226620 GTCCCTAAACCAATAAGTCCCTGA 59.773 45.833 0.00 0.00 0.00 3.86
1729 1790 4.227527 AGTCCCTAAACCAATAAGTCCCTG 59.772 45.833 0.00 0.00 0.00 4.45
1730 1791 4.445564 AGTCCCTAAACCAATAAGTCCCT 58.554 43.478 0.00 0.00 0.00 4.20
1731 1792 4.857130 AGTCCCTAAACCAATAAGTCCC 57.143 45.455 0.00 0.00 0.00 4.46
1732 1793 8.640063 TTTTAAGTCCCTAAACCAATAAGTCC 57.360 34.615 0.00 0.00 0.00 3.85
1755 1816 6.910259 AGATGGGACTTATAGGGACTTTTT 57.090 37.500 0.00 0.00 41.75 1.94
1756 1817 8.272889 GTTTAGATGGGACTTATAGGGACTTTT 58.727 37.037 0.00 0.00 41.75 2.27
1757 1818 7.147355 GGTTTAGATGGGACTTATAGGGACTTT 60.147 40.741 0.00 0.00 41.75 2.66
1758 1819 6.329460 GGTTTAGATGGGACTTATAGGGACTT 59.671 42.308 0.00 0.00 41.75 3.01
1759 1820 5.845065 GGTTTAGATGGGACTTATAGGGACT 59.155 44.000 0.00 0.00 46.37 3.85
1760 1821 5.605488 TGGTTTAGATGGGACTTATAGGGAC 59.395 44.000 0.00 0.00 0.00 4.46
1761 1822 5.795079 TGGTTTAGATGGGACTTATAGGGA 58.205 41.667 0.00 0.00 0.00 4.20
1762 1823 6.509523 TTGGTTTAGATGGGACTTATAGGG 57.490 41.667 0.00 0.00 0.00 3.53
1763 1824 7.343357 TGTTTGGTTTAGATGGGACTTATAGG 58.657 38.462 0.00 0.00 0.00 2.57
1764 1825 7.499232 CCTGTTTGGTTTAGATGGGACTTATAG 59.501 40.741 0.00 0.00 0.00 1.31
1765 1826 7.183112 TCCTGTTTGGTTTAGATGGGACTTATA 59.817 37.037 0.00 0.00 37.07 0.98
1766 1827 6.011981 TCCTGTTTGGTTTAGATGGGACTTAT 60.012 38.462 0.00 0.00 37.07 1.73
1767 1828 5.311121 TCCTGTTTGGTTTAGATGGGACTTA 59.689 40.000 0.00 0.00 37.07 2.24
1768 1829 4.105697 TCCTGTTTGGTTTAGATGGGACTT 59.894 41.667 0.00 0.00 37.07 3.01
1769 1830 3.655777 TCCTGTTTGGTTTAGATGGGACT 59.344 43.478 0.00 0.00 37.07 3.85
1770 1831 4.010349 CTCCTGTTTGGTTTAGATGGGAC 58.990 47.826 0.00 0.00 37.07 4.46
1771 1832 3.913799 TCTCCTGTTTGGTTTAGATGGGA 59.086 43.478 0.00 0.00 37.07 4.37
1772 1833 4.019321 TCTCTCCTGTTTGGTTTAGATGGG 60.019 45.833 0.00 0.00 37.07 4.00
1773 1834 4.938226 GTCTCTCCTGTTTGGTTTAGATGG 59.062 45.833 0.00 0.00 37.07 3.51
1774 1835 5.799213 AGTCTCTCCTGTTTGGTTTAGATG 58.201 41.667 0.00 0.00 37.07 2.90
1775 1836 6.441088 AAGTCTCTCCTGTTTGGTTTAGAT 57.559 37.500 0.00 0.00 37.07 1.98
1776 1837 5.888982 AAGTCTCTCCTGTTTGGTTTAGA 57.111 39.130 0.00 0.00 37.07 2.10
1777 1838 7.982354 CCTATAAGTCTCTCCTGTTTGGTTTAG 59.018 40.741 0.00 0.00 37.07 1.85
1778 1839 7.093024 CCCTATAAGTCTCTCCTGTTTGGTTTA 60.093 40.741 0.00 0.00 37.07 2.01
1779 1840 6.296489 CCCTATAAGTCTCTCCTGTTTGGTTT 60.296 42.308 0.00 0.00 37.07 3.27
1780 1841 5.189934 CCCTATAAGTCTCTCCTGTTTGGTT 59.810 44.000 0.00 0.00 37.07 3.67
1781 1842 4.717280 CCCTATAAGTCTCTCCTGTTTGGT 59.283 45.833 0.00 0.00 37.07 3.67
1782 1843 4.962995 TCCCTATAAGTCTCTCCTGTTTGG 59.037 45.833 0.00 0.00 37.10 3.28
1783 1844 5.659079 AGTCCCTATAAGTCTCTCCTGTTTG 59.341 44.000 0.00 0.00 0.00 2.93
1784 1845 5.844601 AGTCCCTATAAGTCTCTCCTGTTT 58.155 41.667 0.00 0.00 0.00 2.83
1785 1846 5.475398 AGTCCCTATAAGTCTCTCCTGTT 57.525 43.478 0.00 0.00 0.00 3.16
1786 1847 5.475398 AAGTCCCTATAAGTCTCTCCTGT 57.525 43.478 0.00 0.00 0.00 4.00
1787 1848 7.562088 ACTTTAAGTCCCTATAAGTCTCTCCTG 59.438 40.741 0.00 0.00 0.00 3.86
1788 1849 7.562088 CACTTTAAGTCCCTATAAGTCTCTCCT 59.438 40.741 0.00 0.00 0.00 3.69
1789 1850 7.201929 CCACTTTAAGTCCCTATAAGTCTCTCC 60.202 44.444 0.00 0.00 0.00 3.71
1790 1851 7.201929 CCCACTTTAAGTCCCTATAAGTCTCTC 60.202 44.444 0.00 0.00 0.00 3.20
1791 1852 6.612049 CCCACTTTAAGTCCCTATAAGTCTCT 59.388 42.308 0.00 0.00 0.00 3.10
1792 1853 6.685873 GCCCACTTTAAGTCCCTATAAGTCTC 60.686 46.154 0.00 0.00 0.00 3.36
1793 1854 5.130643 GCCCACTTTAAGTCCCTATAAGTCT 59.869 44.000 0.00 0.00 0.00 3.24
1794 1855 5.104652 TGCCCACTTTAAGTCCCTATAAGTC 60.105 44.000 0.00 0.00 0.00 3.01
1795 1856 4.786454 TGCCCACTTTAAGTCCCTATAAGT 59.214 41.667 0.00 0.00 0.00 2.24
1796 1857 5.367945 TGCCCACTTTAAGTCCCTATAAG 57.632 43.478 0.00 0.00 0.00 1.73
1797 1858 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
1798 1859 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
1799 1860 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
1800 1861 4.043561 TCAAATGCCCACTTTAAGTCCCTA 59.956 41.667 0.00 0.00 0.00 3.53
1801 1862 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
1802 1863 3.161866 TCAAATGCCCACTTTAAGTCCC 58.838 45.455 0.00 0.00 0.00 4.46
1803 1864 4.079253 TCTCAAATGCCCACTTTAAGTCC 58.921 43.478 0.00 0.00 0.00 3.85
1804 1865 4.762251 AGTCTCAAATGCCCACTTTAAGTC 59.238 41.667 0.00 0.00 0.00 3.01
1805 1866 4.729868 AGTCTCAAATGCCCACTTTAAGT 58.270 39.130 0.00 0.00 0.00 2.24
1806 1867 5.712152 AAGTCTCAAATGCCCACTTTAAG 57.288 39.130 0.00 0.00 0.00 1.85
1807 1868 6.945435 TCATAAGTCTCAAATGCCCACTTTAA 59.055 34.615 0.00 0.00 0.00 1.52
1808 1869 6.480763 TCATAAGTCTCAAATGCCCACTTTA 58.519 36.000 0.00 0.00 0.00 1.85
1809 1870 5.324409 TCATAAGTCTCAAATGCCCACTTT 58.676 37.500 0.00 0.00 0.00 2.66
1810 1871 4.922206 TCATAAGTCTCAAATGCCCACTT 58.078 39.130 0.00 0.00 0.00 3.16
1811 1872 4.574674 TCATAAGTCTCAAATGCCCACT 57.425 40.909 0.00 0.00 0.00 4.00
1812 1873 5.643379 TTTCATAAGTCTCAAATGCCCAC 57.357 39.130 0.00 0.00 0.00 4.61
1813 1874 7.833682 TCTTATTTCATAAGTCTCAAATGCCCA 59.166 33.333 3.93 0.00 42.21 5.36
1814 1875 8.131731 GTCTTATTTCATAAGTCTCAAATGCCC 58.868 37.037 3.93 0.00 42.21 5.36
1815 1876 8.897752 AGTCTTATTTCATAAGTCTCAAATGCC 58.102 33.333 3.93 0.00 42.21 4.40
1838 1899 9.308318 GTCCATATAAGACTTTTCTTGAGAGTC 57.692 37.037 0.00 7.63 42.41 3.36
1839 1900 9.041354 AGTCCATATAAGACTTTTCTTGAGAGT 57.959 33.333 0.00 0.00 41.87 3.24
1857 1918 9.998106 GACCACATTACAACTATAAGTCCATAT 57.002 33.333 0.00 0.00 0.00 1.78
1858 1919 9.209048 AGACCACATTACAACTATAAGTCCATA 57.791 33.333 0.00 0.00 0.00 2.74
1859 1920 8.090788 AGACCACATTACAACTATAAGTCCAT 57.909 34.615 0.00 0.00 0.00 3.41
1860 1921 7.490657 AGACCACATTACAACTATAAGTCCA 57.509 36.000 0.00 0.00 0.00 4.02
1866 1927 9.886337 TCCCTATAAGACCACATTACAACTATA 57.114 33.333 0.00 0.00 0.00 1.31
1867 1928 8.648693 GTCCCTATAAGACCACATTACAACTAT 58.351 37.037 0.00 0.00 0.00 2.12
1868 1929 7.842743 AGTCCCTATAAGACCACATTACAACTA 59.157 37.037 0.09 0.00 34.67 2.24
1869 1930 6.672657 AGTCCCTATAAGACCACATTACAACT 59.327 38.462 0.09 0.00 34.67 3.16
1870 1931 6.885922 AGTCCCTATAAGACCACATTACAAC 58.114 40.000 0.09 0.00 34.67 3.32
1871 1932 7.504926 AAGTCCCTATAAGACCACATTACAA 57.495 36.000 0.09 0.00 34.67 2.41
1872 1933 8.792830 ATAAGTCCCTATAAGACCACATTACA 57.207 34.615 0.09 0.00 34.67 2.41
1875 1936 9.448587 ACTTATAAGTCCCTATAAGACCACATT 57.551 33.333 12.50 0.00 41.46 2.71
1892 1953 5.073965 TGTTTGGTTCCTGGGACTTATAAGT 59.926 40.000 18.05 18.05 43.16 2.24
1893 1954 5.566469 TGTTTGGTTCCTGGGACTTATAAG 58.434 41.667 11.05 11.05 0.00 1.73
1894 1955 5.586155 TGTTTGGTTCCTGGGACTTATAA 57.414 39.130 4.84 0.00 0.00 0.98
1895 1956 5.073965 ACTTGTTTGGTTCCTGGGACTTATA 59.926 40.000 4.84 0.00 0.00 0.98
1896 1957 4.141018 ACTTGTTTGGTTCCTGGGACTTAT 60.141 41.667 4.84 0.00 0.00 1.73
1897 1958 3.203487 ACTTGTTTGGTTCCTGGGACTTA 59.797 43.478 4.84 0.00 0.00 2.24
1898 1959 2.024369 ACTTGTTTGGTTCCTGGGACTT 60.024 45.455 4.84 0.00 0.00 3.01
1899 1960 1.569072 ACTTGTTTGGTTCCTGGGACT 59.431 47.619 4.84 0.00 0.00 3.85
1900 1961 2.067365 ACTTGTTTGGTTCCTGGGAC 57.933 50.000 0.00 0.00 0.00 4.46
1901 1962 2.107552 CCTACTTGTTTGGTTCCTGGGA 59.892 50.000 0.00 0.00 0.00 4.37
1902 1963 2.514803 CCTACTTGTTTGGTTCCTGGG 58.485 52.381 0.00 0.00 0.00 4.45
1903 1964 2.107552 TCCCTACTTGTTTGGTTCCTGG 59.892 50.000 0.00 0.00 0.00 4.45
1904 1965 3.146847 GTCCCTACTTGTTTGGTTCCTG 58.853 50.000 0.00 0.00 0.00 3.86
1905 1966 3.053826 AGTCCCTACTTGTTTGGTTCCT 58.946 45.455 0.00 0.00 29.00 3.36
1906 1967 3.503800 AGTCCCTACTTGTTTGGTTCC 57.496 47.619 0.00 0.00 29.00 3.62
1907 1968 5.847111 AAAAGTCCCTACTTGTTTGGTTC 57.153 39.130 0.00 0.00 45.37 3.62
1908 1969 7.120716 TCTAAAAAGTCCCTACTTGTTTGGTT 58.879 34.615 0.00 0.00 45.37 3.67
1909 1970 6.665695 TCTAAAAAGTCCCTACTTGTTTGGT 58.334 36.000 0.00 0.00 45.37 3.67
1910 1971 6.996282 TCTCTAAAAAGTCCCTACTTGTTTGG 59.004 38.462 0.00 2.58 45.37 3.28
1911 1972 7.715686 AGTCTCTAAAAAGTCCCTACTTGTTTG 59.284 37.037 0.00 0.00 45.37 2.93
1912 1973 7.803131 AGTCTCTAAAAAGTCCCTACTTGTTT 58.197 34.615 0.00 2.74 45.37 2.83
1913 1974 7.376335 AGTCTCTAAAAAGTCCCTACTTGTT 57.624 36.000 0.00 0.00 45.37 2.83
1914 1975 6.997942 AGTCTCTAAAAAGTCCCTACTTGT 57.002 37.500 0.00 0.00 45.37 3.16
1915 1976 7.171678 CACAAGTCTCTAAAAAGTCCCTACTTG 59.828 40.741 0.00 0.00 45.37 3.16
1917 1978 6.553852 TCACAAGTCTCTAAAAAGTCCCTACT 59.446 38.462 0.00 0.00 37.65 2.57
1918 1979 6.645827 GTCACAAGTCTCTAAAAAGTCCCTAC 59.354 42.308 0.00 0.00 0.00 3.18
1919 1980 6.553852 AGTCACAAGTCTCTAAAAAGTCCCTA 59.446 38.462 0.00 0.00 0.00 3.53
1920 1981 5.367060 AGTCACAAGTCTCTAAAAAGTCCCT 59.633 40.000 0.00 0.00 0.00 4.20
1921 1982 5.612351 AGTCACAAGTCTCTAAAAAGTCCC 58.388 41.667 0.00 0.00 0.00 4.46
1922 1983 6.539103 ACAAGTCACAAGTCTCTAAAAAGTCC 59.461 38.462 0.00 0.00 0.00 3.85
1923 1984 7.541122 ACAAGTCACAAGTCTCTAAAAAGTC 57.459 36.000 0.00 0.00 0.00 3.01
1924 1985 9.099454 CTTACAAGTCACAAGTCTCTAAAAAGT 57.901 33.333 0.00 0.00 0.00 2.66
1925 1986 9.099454 ACTTACAAGTCACAAGTCTCTAAAAAG 57.901 33.333 0.00 0.00 32.86 2.27
1926 1987 9.444600 AACTTACAAGTCACAAGTCTCTAAAAA 57.555 29.630 0.00 0.00 38.57 1.94
1927 1988 8.879759 CAACTTACAAGTCACAAGTCTCTAAAA 58.120 33.333 0.00 0.00 38.57 1.52
1928 1989 7.494625 CCAACTTACAAGTCACAAGTCTCTAAA 59.505 37.037 0.00 0.00 38.57 1.85
1929 1990 6.984474 CCAACTTACAAGTCACAAGTCTCTAA 59.016 38.462 0.00 0.00 38.57 2.10
1930 1991 6.462487 CCCAACTTACAAGTCACAAGTCTCTA 60.462 42.308 0.00 0.00 38.57 2.43
1931 1992 5.360591 CCAACTTACAAGTCACAAGTCTCT 58.639 41.667 0.00 0.00 38.57 3.10
1932 1993 4.511826 CCCAACTTACAAGTCACAAGTCTC 59.488 45.833 0.00 0.00 38.57 3.36
1933 1994 4.163458 TCCCAACTTACAAGTCACAAGTCT 59.837 41.667 0.00 0.00 38.57 3.24
1934 1995 4.272748 GTCCCAACTTACAAGTCACAAGTC 59.727 45.833 0.00 0.00 38.57 3.01
1935 1996 4.080526 AGTCCCAACTTACAAGTCACAAGT 60.081 41.667 0.00 0.00 38.57 3.16
1936 1997 4.451900 AGTCCCAACTTACAAGTCACAAG 58.548 43.478 0.00 0.00 38.57 3.16
1937 1998 4.497291 AGTCCCAACTTACAAGTCACAA 57.503 40.909 0.00 0.00 38.57 3.33
1938 1999 5.617528 TTAGTCCCAACTTACAAGTCACA 57.382 39.130 0.00 0.00 38.57 3.58
1939 2000 6.930667 TTTTAGTCCCAACTTACAAGTCAC 57.069 37.500 0.00 0.00 38.57 3.67
1966 2027 5.801380 TGTTTGGTTCATAAGTCCTAGGAC 58.199 41.667 31.29 31.29 44.86 3.85
1967 2028 5.045869 CCTGTTTGGTTCATAAGTCCTAGGA 60.046 44.000 7.62 7.62 0.00 2.94
1968 2029 5.186198 CCTGTTTGGTTCATAAGTCCTAGG 58.814 45.833 0.82 0.82 0.00 3.02
1969 2030 5.186198 CCCTGTTTGGTTCATAAGTCCTAG 58.814 45.833 0.00 0.00 0.00 3.02
1970 2031 4.566907 GCCCTGTTTGGTTCATAAGTCCTA 60.567 45.833 0.00 0.00 0.00 2.94
1971 2032 3.814316 GCCCTGTTTGGTTCATAAGTCCT 60.814 47.826 0.00 0.00 0.00 3.85
1972 2033 2.492088 GCCCTGTTTGGTTCATAAGTCC 59.508 50.000 0.00 0.00 0.00 3.85
1973 2034 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
1974 2035 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
1975 2036 2.493278 CAGGCCCTGTTTGGTTCATAAG 59.507 50.000 1.39 0.00 0.00 1.73
1976 2037 2.109128 TCAGGCCCTGTTTGGTTCATAA 59.891 45.455 11.27 0.00 32.61 1.90
1977 2038 1.707989 TCAGGCCCTGTTTGGTTCATA 59.292 47.619 11.27 0.00 32.61 2.15
1978 2039 0.482446 TCAGGCCCTGTTTGGTTCAT 59.518 50.000 11.27 0.00 32.61 2.57
1979 2040 0.178992 CTCAGGCCCTGTTTGGTTCA 60.179 55.000 11.27 0.00 32.61 3.18
1980 2041 0.895559 CCTCAGGCCCTGTTTGGTTC 60.896 60.000 11.27 0.00 32.61 3.62
1981 2042 1.153756 CCTCAGGCCCTGTTTGGTT 59.846 57.895 11.27 0.00 32.61 3.67
1982 2043 2.069165 GACCTCAGGCCCTGTTTGGT 62.069 60.000 19.86 19.86 35.17 3.67
1983 2044 1.303643 GACCTCAGGCCCTGTTTGG 60.304 63.158 11.27 13.64 32.61 3.28
1984 2045 1.303643 GGACCTCAGGCCCTGTTTG 60.304 63.158 11.27 3.08 32.61 2.93
1985 2046 2.539081 GGGACCTCAGGCCCTGTTT 61.539 63.158 11.27 0.00 36.54 2.83
1986 2047 2.936032 GGGACCTCAGGCCCTGTT 60.936 66.667 11.27 0.00 36.54 3.16
1996 2057 8.948235 AGTTTACAAACGATAACGGGGACCTC 62.948 46.154 0.00 0.00 45.43 3.85
1997 2058 7.257500 AGTTTACAAACGATAACGGGGACCT 62.258 44.000 0.00 0.00 45.43 3.85
1998 2059 5.097686 AGTTTACAAACGATAACGGGGACC 61.098 45.833 0.00 0.00 44.65 4.46
1999 2060 3.996363 AGTTTACAAACGATAACGGGGAC 59.004 43.478 0.00 0.00 43.51 4.46
2000 2061 4.244862 GAGTTTACAAACGATAACGGGGA 58.755 43.478 0.00 0.00 43.51 4.81
2001 2062 3.995705 TGAGTTTACAAACGATAACGGGG 59.004 43.478 0.00 0.00 43.51 5.73
2002 2063 5.594724 TTGAGTTTACAAACGATAACGGG 57.405 39.130 0.00 0.00 43.51 5.28
2003 2064 7.057149 AGATTGAGTTTACAAACGATAACGG 57.943 36.000 0.00 0.00 43.51 4.44
2004 2065 8.007716 ACAAGATTGAGTTTACAAACGATAACG 58.992 33.333 0.00 0.00 43.51 3.18
2005 2066 9.103048 CACAAGATTGAGTTTACAAACGATAAC 57.897 33.333 0.00 0.00 43.51 1.89
2006 2067 7.801315 GCACAAGATTGAGTTTACAAACGATAA 59.199 33.333 0.00 0.00 43.51 1.75
2007 2068 7.041712 TGCACAAGATTGAGTTTACAAACGATA 60.042 33.333 0.00 0.00 43.51 2.92
2008 2069 6.142817 GCACAAGATTGAGTTTACAAACGAT 58.857 36.000 0.00 0.00 43.51 3.73
2009 2070 5.065346 TGCACAAGATTGAGTTTACAAACGA 59.935 36.000 0.00 0.00 43.51 3.85
2010 2071 5.270083 TGCACAAGATTGAGTTTACAAACG 58.730 37.500 0.00 0.00 43.51 3.60
2011 2072 7.326063 GGTATGCACAAGATTGAGTTTACAAAC 59.674 37.037 0.00 0.00 39.17 2.93
2012 2073 7.367285 GGTATGCACAAGATTGAGTTTACAAA 58.633 34.615 0.00 0.00 33.44 2.83
2016 2077 5.815581 AGGGTATGCACAAGATTGAGTTTA 58.184 37.500 0.00 0.00 0.00 2.01
2023 2084 2.173569 GGGAGAGGGTATGCACAAGATT 59.826 50.000 0.00 0.00 0.00 2.40
2028 2089 0.042581 TCTGGGAGAGGGTATGCACA 59.957 55.000 0.00 0.00 0.00 4.57
2070 3318 2.824936 AGGAGCAGATATCGTCAGATGG 59.175 50.000 0.00 0.00 37.70 3.51
2099 3347 1.807573 GCCGAGAGAAGCCACGAAG 60.808 63.158 0.00 0.00 0.00 3.79
2120 3368 1.206831 GAGCCGAGCGTTTGTTTCC 59.793 57.895 0.00 0.00 0.00 3.13
2126 3374 0.034337 TAGTTTGGAGCCGAGCGTTT 59.966 50.000 0.00 0.00 0.00 3.60
2129 3377 0.460284 ATGTAGTTTGGAGCCGAGCG 60.460 55.000 0.00 0.00 0.00 5.03
2282 3565 4.925576 CGGGTTCGCTCGGGATCG 62.926 72.222 0.00 0.00 37.46 3.69
2289 3572 2.543238 CCTACTTGATACGGGTTCGCTC 60.543 54.545 0.00 0.00 40.63 5.03
2290 3573 1.407979 CCTACTTGATACGGGTTCGCT 59.592 52.381 0.00 0.00 40.63 4.93
2291 3574 1.135721 ACCTACTTGATACGGGTTCGC 59.864 52.381 0.00 0.00 40.63 4.70
2292 3575 2.480759 CCACCTACTTGATACGGGTTCG 60.481 54.545 0.00 0.00 43.02 3.95
2293 3576 2.740904 GCCACCTACTTGATACGGGTTC 60.741 54.545 0.00 0.00 0.00 3.62
2294 3577 1.208776 GCCACCTACTTGATACGGGTT 59.791 52.381 0.00 0.00 0.00 4.11
2295 3578 0.828677 GCCACCTACTTGATACGGGT 59.171 55.000 0.00 0.00 0.00 5.28
2296 3579 1.120530 AGCCACCTACTTGATACGGG 58.879 55.000 0.00 0.00 0.00 5.28
2297 3580 2.483188 GGAAGCCACCTACTTGATACGG 60.483 54.545 0.00 0.00 0.00 4.02
2298 3581 2.431057 AGGAAGCCACCTACTTGATACG 59.569 50.000 0.00 0.00 38.65 3.06
2299 3582 3.451178 TGAGGAAGCCACCTACTTGATAC 59.549 47.826 0.00 0.00 40.73 2.24
2300 3583 3.719871 TGAGGAAGCCACCTACTTGATA 58.280 45.455 0.00 0.00 40.73 2.15
2301 3584 2.551270 TGAGGAAGCCACCTACTTGAT 58.449 47.619 0.00 0.00 40.73 2.57
2302 3585 2.024176 TGAGGAAGCCACCTACTTGA 57.976 50.000 0.00 0.00 40.73 3.02
2303 3586 2.859165 TTGAGGAAGCCACCTACTTG 57.141 50.000 0.00 0.00 40.73 3.16
2304 3587 3.330701 TCATTTGAGGAAGCCACCTACTT 59.669 43.478 0.00 0.00 40.73 2.24
2305 3588 2.912956 TCATTTGAGGAAGCCACCTACT 59.087 45.455 0.00 0.00 40.73 2.57
2306 3589 3.350219 TCATTTGAGGAAGCCACCTAC 57.650 47.619 0.00 0.00 40.73 3.18
2307 3590 4.018506 TCAATCATTTGAGGAAGCCACCTA 60.019 41.667 0.00 0.00 40.73 3.08
2308 3591 3.094572 CAATCATTTGAGGAAGCCACCT 58.905 45.455 0.00 0.00 43.64 4.00
2309 3592 3.091545 TCAATCATTTGAGGAAGCCACC 58.908 45.455 0.00 0.00 36.94 4.61
2310 3593 4.441079 CCATCAATCATTTGAGGAAGCCAC 60.441 45.833 2.25 0.00 44.42 5.01
2311 3594 3.702548 CCATCAATCATTTGAGGAAGCCA 59.297 43.478 2.25 0.00 44.42 4.75
2312 3595 3.492137 GCCATCAATCATTTGAGGAAGCC 60.492 47.826 2.25 0.00 44.42 4.35
2313 3596 3.492137 GGCCATCAATCATTTGAGGAAGC 60.492 47.826 0.00 0.00 44.42 3.86
2314 3597 3.958798 AGGCCATCAATCATTTGAGGAAG 59.041 43.478 5.01 0.00 44.42 3.46
2315 3598 3.956199 GAGGCCATCAATCATTTGAGGAA 59.044 43.478 5.01 0.00 44.42 3.36
2316 3599 3.559069 GAGGCCATCAATCATTTGAGGA 58.441 45.455 5.01 0.00 44.42 3.71
2317 3600 2.292569 CGAGGCCATCAATCATTTGAGG 59.707 50.000 5.01 0.00 44.75 3.86
2318 3601 2.287427 GCGAGGCCATCAATCATTTGAG 60.287 50.000 5.01 0.00 44.75 3.02
2319 3602 1.677576 GCGAGGCCATCAATCATTTGA 59.322 47.619 5.01 0.00 45.57 2.69
2320 3603 2.129823 GCGAGGCCATCAATCATTTG 57.870 50.000 5.01 0.00 0.00 2.32
2380 3663 3.839046 TAGGTGCCCGTGGTGGAGT 62.839 63.158 0.00 0.00 42.00 3.85
2399 3682 2.173519 CCAGTTTTGGGTGAGATGCAT 58.826 47.619 0.00 0.00 41.05 3.96
2408 3691 0.835971 GGGGATTGCCAGTTTTGGGT 60.836 55.000 0.00 0.00 45.16 4.51
2420 3703 1.063942 GGTGTTTAGGGAGGGGGATTG 60.064 57.143 0.00 0.00 0.00 2.67
2436 3719 2.166907 TTTGTGGTCAATTGGGGTGT 57.833 45.000 5.42 0.00 33.32 4.16
2505 3789 6.402118 CCACAATTCACTATCTAACAACCGTG 60.402 42.308 0.00 0.00 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.