Multiple sequence alignment - TraesCS3B01G440700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G440700 | chr3B | 100.000 | 5841 | 0 | 0 | 1 | 5841 | 680336554 | 680330714 | 0.000000e+00 | 10787.0 |
1 | TraesCS3B01G440700 | chr3A | 93.438 | 4145 | 196 | 37 | 765 | 4852 | 652774612 | 652778737 | 0.000000e+00 | 6078.0 |
2 | TraesCS3B01G440700 | chr3A | 88.124 | 741 | 60 | 15 | 60 | 780 | 652773865 | 652774597 | 0.000000e+00 | 856.0 |
3 | TraesCS3B01G440700 | chr3A | 85.470 | 234 | 25 | 7 | 5124 | 5353 | 652779359 | 652779587 | 9.790000e-58 | 235.0 |
4 | TraesCS3B01G440700 | chr3D | 92.054 | 2152 | 124 | 30 | 3255 | 5367 | 516963417 | 516965560 | 0.000000e+00 | 2983.0 |
5 | TraesCS3B01G440700 | chr3D | 93.730 | 1260 | 59 | 10 | 2003 | 3247 | 516962001 | 516963255 | 0.000000e+00 | 1871.0 |
6 | TraesCS3B01G440700 | chr3D | 91.694 | 1240 | 57 | 16 | 765 | 1974 | 516960782 | 516962005 | 0.000000e+00 | 1677.0 |
7 | TraesCS3B01G440700 | chr3D | 93.300 | 791 | 28 | 6 | 1 | 780 | 516959991 | 516960767 | 0.000000e+00 | 1144.0 |
8 | TraesCS3B01G440700 | chr5B | 96.017 | 477 | 10 | 2 | 5368 | 5835 | 707468258 | 707467782 | 0.000000e+00 | 767.0 |
9 | TraesCS3B01G440700 | chr5B | 87.143 | 70 | 7 | 2 | 1 | 69 | 599332288 | 599332220 | 1.750000e-10 | 78.7 |
10 | TraesCS3B01G440700 | chr2A | 94.561 | 478 | 20 | 4 | 5368 | 5841 | 111441395 | 111441870 | 0.000000e+00 | 734.0 |
11 | TraesCS3B01G440700 | chr2A | 83.558 | 371 | 52 | 8 | 1 | 365 | 464291928 | 464291561 | 7.250000e-89 | 339.0 |
12 | TraesCS3B01G440700 | chr6B | 93.139 | 481 | 18 | 5 | 5368 | 5841 | 46627173 | 46627645 | 0.000000e+00 | 691.0 |
13 | TraesCS3B01G440700 | chr6B | 92.105 | 418 | 21 | 11 | 5368 | 5778 | 482826491 | 482826079 | 3.920000e-161 | 579.0 |
14 | TraesCS3B01G440700 | chr6A | 92.678 | 478 | 16 | 6 | 5368 | 5841 | 33375982 | 33376444 | 0.000000e+00 | 671.0 |
15 | TraesCS3B01G440700 | chr6A | 92.288 | 389 | 21 | 9 | 5368 | 5752 | 158422418 | 158422035 | 1.430000e-150 | 544.0 |
16 | TraesCS3B01G440700 | chr5A | 91.866 | 418 | 22 | 11 | 5368 | 5778 | 641774210 | 641773798 | 1.830000e-159 | 573.0 |
17 | TraesCS3B01G440700 | chr5A | 84.677 | 372 | 46 | 7 | 1 | 364 | 602265709 | 602265341 | 1.550000e-95 | 361.0 |
18 | TraesCS3B01G440700 | chr7B | 92.138 | 407 | 20 | 4 | 5368 | 5770 | 628737691 | 628738089 | 1.100000e-156 | 564.0 |
19 | TraesCS3B01G440700 | chr7B | 92.231 | 399 | 21 | 9 | 5368 | 5761 | 75060401 | 75060008 | 1.840000e-154 | 556.0 |
20 | TraesCS3B01G440700 | chr7B | 87.302 | 504 | 30 | 20 | 5368 | 5841 | 11634192 | 11634691 | 3.980000e-151 | 545.0 |
21 | TraesCS3B01G440700 | chr5D | 84.409 | 372 | 45 | 8 | 1 | 364 | 482458102 | 482457736 | 2.590000e-93 | 353.0 |
22 | TraesCS3B01G440700 | chr7A | 79.620 | 368 | 59 | 8 | 61 | 426 | 15280663 | 15281016 | 3.490000e-62 | 250.0 |
23 | TraesCS3B01G440700 | chr7A | 73.846 | 325 | 47 | 14 | 1 | 310 | 547334954 | 547335255 | 1.730000e-15 | 95.3 |
24 | TraesCS3B01G440700 | chr4A | 75.467 | 375 | 59 | 17 | 1 | 367 | 130977831 | 130977482 | 1.010000e-32 | 152.0 |
25 | TraesCS3B01G440700 | chr2B | 90.141 | 71 | 6 | 1 | 89 | 159 | 770221320 | 770221251 | 2.240000e-14 | 91.6 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G440700 | chr3B | 680330714 | 680336554 | 5840 | True | 10787.000000 | 10787 | 100.000000 | 1 | 5841 | 1 | chr3B.!!$R1 | 5840 |
1 | TraesCS3B01G440700 | chr3A | 652773865 | 652779587 | 5722 | False | 2389.666667 | 6078 | 89.010667 | 60 | 5353 | 3 | chr3A.!!$F1 | 5293 |
2 | TraesCS3B01G440700 | chr3D | 516959991 | 516965560 | 5569 | False | 1918.750000 | 2983 | 92.694500 | 1 | 5367 | 4 | chr3D.!!$F1 | 5366 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
420 | 431 | 0.307760 | GCGGGATGTGATTTTAGCGG | 59.692 | 55.000 | 0.00 | 0.0 | 0.00 | 5.52 | F |
562 | 583 | 0.389757 | GCTCCTAGGTCATTCGGGAC | 59.610 | 60.000 | 9.08 | 0.0 | 37.06 | 4.46 | F |
1018 | 1081 | 1.400846 | GAATGTACTCCGTGCTCTCGA | 59.599 | 52.381 | 0.00 | 0.0 | 0.00 | 4.04 | F |
1887 | 1974 | 2.614057 | CCTGTTGGTCACTGTTTCACTC | 59.386 | 50.000 | 0.00 | 0.0 | 0.00 | 3.51 | F |
3136 | 3259 | 1.733041 | ACACCGTCAATGAGCGTCG | 60.733 | 57.895 | 4.99 | 0.0 | 0.00 | 5.12 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1502 | 1571 | 1.134670 | GCAGAATGGCTAAGAGACCGT | 60.135 | 52.381 | 0.00 | 0.00 | 35.86 | 4.83 | R |
1579 | 1655 | 2.622942 | TGGGAAGTTCAATTCAGCACAC | 59.377 | 45.455 | 5.01 | 0.00 | 0.00 | 3.82 | R |
2233 | 2333 | 2.738743 | ACAACAGCAATAATCAGGGGG | 58.261 | 47.619 | 0.00 | 0.00 | 0.00 | 5.40 | R |
3416 | 3697 | 1.134907 | CAGGGGAACGTGCGTAGTATT | 60.135 | 52.381 | 0.00 | 0.00 | 39.65 | 1.89 | R |
4852 | 5146 | 0.107456 | CGGGAGGGCTCTACGTAGTA | 59.893 | 60.000 | 21.53 | 8.29 | 45.11 | 1.82 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
103 | 105 | 5.079689 | CCCCCATTTGTTGTGGTATTAAC | 57.920 | 43.478 | 0.00 | 0.00 | 34.87 | 2.01 |
333 | 344 | 6.568844 | GCGGGACAAGTTTACATGATTTGTTA | 60.569 | 38.462 | 0.00 | 0.00 | 39.87 | 2.41 |
362 | 373 | 0.672401 | CCTCACGGTACCGCATTTGT | 60.672 | 55.000 | 33.62 | 10.87 | 44.19 | 2.83 |
363 | 374 | 1.153353 | CTCACGGTACCGCATTTGTT | 58.847 | 50.000 | 33.62 | 10.05 | 44.19 | 2.83 |
364 | 375 | 1.533731 | CTCACGGTACCGCATTTGTTT | 59.466 | 47.619 | 33.62 | 9.23 | 44.19 | 2.83 |
390 | 401 | 1.173043 | TCTTTTACATGCGGCCCTTG | 58.827 | 50.000 | 0.00 | 1.19 | 0.00 | 3.61 |
420 | 431 | 0.307760 | GCGGGATGTGATTTTAGCGG | 59.692 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
452 | 472 | 3.515562 | AGAGTTTCATCAGAGGTCCTGT | 58.484 | 45.455 | 0.00 | 0.00 | 43.38 | 4.00 |
453 | 473 | 4.678256 | AGAGTTTCATCAGAGGTCCTGTA | 58.322 | 43.478 | 0.00 | 0.00 | 43.38 | 2.74 |
507 | 528 | 5.773091 | AGTTTTCTTTGGGGTCCTTCTAAA | 58.227 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
562 | 583 | 0.389757 | GCTCCTAGGTCATTCGGGAC | 59.610 | 60.000 | 9.08 | 0.00 | 37.06 | 4.46 |
613 | 634 | 3.449018 | ACAACAAGCTCGATGACTAGGAT | 59.551 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
1018 | 1081 | 1.400846 | GAATGTACTCCGTGCTCTCGA | 59.599 | 52.381 | 0.00 | 0.00 | 0.00 | 4.04 |
1061 | 1124 | 3.137913 | AGCCGTCTCCAGGTACTAATAGA | 59.862 | 47.826 | 0.00 | 0.00 | 36.02 | 1.98 |
1502 | 1571 | 2.689983 | GTCTCTATTTCCCGTCGGGTTA | 59.310 | 50.000 | 29.31 | 18.47 | 44.74 | 2.85 |
1556 | 1632 | 6.098266 | ACCCACTCTTGTTTAAATTGCTCTTT | 59.902 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
1563 | 1639 | 5.997385 | TGTTTAAATTGCTCTTTCTCGACC | 58.003 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
1579 | 1655 | 3.977427 | TCGACCCTACATTCATCATTCG | 58.023 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
1674 | 1757 | 7.468141 | TGCTTATACATAGGTGATAGACTGG | 57.532 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1691 | 1774 | 5.738909 | AGACTGGTAGATTTGGAATGTCAG | 58.261 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
1727 | 1810 | 9.950680 | TTGAAGTTGATTCTTAATTTCTGTCAC | 57.049 | 29.630 | 0.00 | 0.00 | 38.83 | 3.67 |
1809 | 1896 | 6.984474 | CCTCTTCTTGTTAGAGTGTGTGTTAA | 59.016 | 38.462 | 0.00 | 0.00 | 37.93 | 2.01 |
1812 | 1899 | 8.038944 | TCTTCTTGTTAGAGTGTGTGTTAAGTT | 58.961 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
1814 | 1901 | 7.970384 | TCTTGTTAGAGTGTGTGTTAAGTTTG | 58.030 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
1843 | 1930 | 2.981898 | TGTCTGACAGATGCTTCCATG | 58.018 | 47.619 | 8.73 | 0.00 | 0.00 | 3.66 |
1887 | 1974 | 2.614057 | CCTGTTGGTCACTGTTTCACTC | 59.386 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2143 | 2242 | 6.734137 | TGTTCATTCTTGTTTCAAGCGTATT | 58.266 | 32.000 | 4.82 | 0.00 | 0.00 | 1.89 |
2147 | 2246 | 8.492673 | TCATTCTTGTTTCAAGCGTATTATCT | 57.507 | 30.769 | 4.82 | 0.00 | 0.00 | 1.98 |
2153 | 2252 | 6.394809 | TGTTTCAAGCGTATTATCTGAGTCA | 58.605 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2233 | 2333 | 4.339530 | TGTAGTGAGTGGTGCTATCTCATC | 59.660 | 45.833 | 0.00 | 0.00 | 39.77 | 2.92 |
2235 | 2335 | 2.042464 | TGAGTGGTGCTATCTCATCCC | 58.958 | 52.381 | 0.00 | 0.00 | 34.00 | 3.85 |
2265 | 2365 | 2.559440 | TGCTGTTGTTTGGGAATTTGC | 58.441 | 42.857 | 0.00 | 0.00 | 0.00 | 3.68 |
2291 | 2391 | 7.653713 | CAGTCACTGTTCACTTTGTAGAGTATT | 59.346 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
2292 | 2392 | 8.857098 | AGTCACTGTTCACTTTGTAGAGTATTA | 58.143 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2293 | 2393 | 9.130312 | GTCACTGTTCACTTTGTAGAGTATTAG | 57.870 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
2294 | 2394 | 7.813148 | TCACTGTTCACTTTGTAGAGTATTAGC | 59.187 | 37.037 | 0.00 | 0.00 | 0.00 | 3.09 |
2296 | 2396 | 8.030106 | ACTGTTCACTTTGTAGAGTATTAGCTC | 58.970 | 37.037 | 0.00 | 0.00 | 35.82 | 4.09 |
2297 | 2397 | 7.321153 | TGTTCACTTTGTAGAGTATTAGCTCC | 58.679 | 38.462 | 0.00 | 0.00 | 36.20 | 4.70 |
2298 | 2398 | 7.178628 | TGTTCACTTTGTAGAGTATTAGCTCCT | 59.821 | 37.037 | 0.00 | 0.00 | 36.20 | 3.69 |
2299 | 2399 | 8.684520 | GTTCACTTTGTAGAGTATTAGCTCCTA | 58.315 | 37.037 | 0.00 | 0.00 | 36.20 | 2.94 |
2302 | 2402 | 9.339850 | CACTTTGTAGAGTATTAGCTCCTACTA | 57.660 | 37.037 | 7.83 | 0.00 | 36.20 | 1.82 |
2305 | 2405 | 9.917887 | TTTGTAGAGTATTAGCTCCTACTACTT | 57.082 | 33.333 | 7.83 | 1.95 | 34.23 | 2.24 |
2307 | 2407 | 8.712103 | TGTAGAGTATTAGCTCCTACTACTTCA | 58.288 | 37.037 | 7.83 | 8.24 | 34.23 | 3.02 |
2308 | 2408 | 9.558396 | GTAGAGTATTAGCTCCTACTACTTCAA | 57.442 | 37.037 | 7.83 | 0.00 | 34.23 | 2.69 |
2525 | 2640 | 8.352942 | ACATTTTCCTACACTCATTTTTCTGTC | 58.647 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2597 | 2712 | 8.806429 | ACATTGGTTACATTCTGATGTTCATA | 57.194 | 30.769 | 0.00 | 0.00 | 43.92 | 2.15 |
2715 | 2830 | 5.597594 | GCTTGGGTTGTACTAGATAGGTACT | 59.402 | 44.000 | 0.00 | 0.00 | 46.37 | 2.73 |
2721 | 2836 | 7.146648 | GGTTGTACTAGATAGGTACTTGCATC | 58.853 | 42.308 | 0.00 | 0.00 | 41.75 | 3.91 |
2752 | 2869 | 8.789825 | TTGTTTAATCATTTTTGGCATGCTAT | 57.210 | 26.923 | 18.92 | 0.00 | 0.00 | 2.97 |
2753 | 2870 | 9.881649 | TTGTTTAATCATTTTTGGCATGCTATA | 57.118 | 25.926 | 18.92 | 3.42 | 0.00 | 1.31 |
2761 | 2878 | 8.359642 | TCATTTTTGGCATGCTATATTCCTAAC | 58.640 | 33.333 | 18.92 | 0.00 | 0.00 | 2.34 |
2791 | 2914 | 8.531530 | GCATTTGTTTGTTCAGTAGTTAAACTG | 58.468 | 33.333 | 1.48 | 1.48 | 46.78 | 3.16 |
2798 | 2921 | 9.616156 | TTTGTTCAGTAGTTAAACTGGTATTGA | 57.384 | 29.630 | 7.32 | 0.00 | 45.69 | 2.57 |
2948 | 3071 | 3.269381 | TCAAGCAAAAGTATGGGGGAGAT | 59.731 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
3136 | 3259 | 1.733041 | ACACCGTCAATGAGCGTCG | 60.733 | 57.895 | 4.99 | 0.00 | 0.00 | 5.12 |
3225 | 3348 | 9.443283 | CAATCATAAAGTTGCAACTAGCTTATC | 57.557 | 33.333 | 31.31 | 0.78 | 45.94 | 1.75 |
3287 | 3564 | 8.291032 | GCTTAAAAGGTAGAAAAGGTCTTTCTC | 58.709 | 37.037 | 3.12 | 0.00 | 39.30 | 2.87 |
3320 | 3601 | 5.417894 | AGCTCATTCATGCAGAATTCAAGAA | 59.582 | 36.000 | 8.44 | 4.63 | 44.48 | 2.52 |
3324 | 3605 | 7.088272 | TCATTCATGCAGAATTCAAGAACTTG | 58.912 | 34.615 | 8.44 | 8.09 | 44.48 | 3.16 |
3377 | 3658 | 6.387041 | AGCTGTAGTTTTACCTTCCAAAAC | 57.613 | 37.500 | 3.15 | 3.15 | 43.20 | 2.43 |
3440 | 3721 | 1.252215 | TACGCACGTTCCCCTGATCA | 61.252 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
3751 | 4032 | 3.741476 | GTGCTCAGCTTTGCCCGG | 61.741 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
3921 | 4202 | 4.765339 | GGTGACAAGCATAACCTTACCTTT | 59.235 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
3929 | 4210 | 5.183904 | AGCATAACCTTACCTTTGCTCTTTG | 59.816 | 40.000 | 0.00 | 0.00 | 35.66 | 2.77 |
3962 | 4243 | 4.226427 | TGATGAAATAGACAAGGCAGCT | 57.774 | 40.909 | 0.00 | 0.00 | 0.00 | 4.24 |
4025 | 4306 | 4.426112 | GCAAAGGGGCTGCGCTTC | 62.426 | 66.667 | 16.51 | 0.00 | 0.00 | 3.86 |
4040 | 4321 | 1.818642 | GCTTCCTGCATGAAGAGTGT | 58.181 | 50.000 | 29.15 | 0.00 | 43.60 | 3.55 |
4043 | 4324 | 0.969149 | TCCTGCATGAAGAGTGTCGT | 59.031 | 50.000 | 0.74 | 0.00 | 0.00 | 4.34 |
4089 | 4370 | 1.137404 | CGCCCAAGCAATGTACTGC | 59.863 | 57.895 | 0.00 | 0.00 | 42.97 | 4.40 |
4184 | 4465 | 5.989168 | TCATGAGTTCTGTTGTGATTACGTT | 59.011 | 36.000 | 0.00 | 0.00 | 0.00 | 3.99 |
4209 | 4490 | 3.670105 | TCCACAGCTTGGGGATTTC | 57.330 | 52.632 | 12.99 | 0.00 | 46.95 | 2.17 |
4239 | 4520 | 1.927487 | AATGGAAGGCTGTCAATGCA | 58.073 | 45.000 | 0.00 | 0.00 | 0.00 | 3.96 |
4274 | 4555 | 0.967380 | GTTCTGGGGCAATCAGGGTG | 60.967 | 60.000 | 0.00 | 0.00 | 33.36 | 4.61 |
4279 | 4560 | 1.076485 | GGGCAATCAGGGTGAGCAT | 60.076 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
4288 | 4569 | 5.957771 | ATCAGGGTGAGCATAAAACTCTA | 57.042 | 39.130 | 0.00 | 0.00 | 35.12 | 2.43 |
4289 | 4570 | 5.344743 | TCAGGGTGAGCATAAAACTCTAG | 57.655 | 43.478 | 0.00 | 0.00 | 35.12 | 2.43 |
4290 | 4571 | 4.777896 | TCAGGGTGAGCATAAAACTCTAGT | 59.222 | 41.667 | 0.00 | 0.00 | 35.12 | 2.57 |
4291 | 4572 | 5.248477 | TCAGGGTGAGCATAAAACTCTAGTT | 59.752 | 40.000 | 0.00 | 0.00 | 40.50 | 2.24 |
4292 | 4573 | 5.582665 | CAGGGTGAGCATAAAACTCTAGTTC | 59.417 | 44.000 | 0.00 | 0.00 | 37.25 | 3.01 |
4293 | 4574 | 5.485708 | AGGGTGAGCATAAAACTCTAGTTCT | 59.514 | 40.000 | 0.00 | 0.00 | 37.25 | 3.01 |
4294 | 4575 | 6.013293 | AGGGTGAGCATAAAACTCTAGTTCTT | 60.013 | 38.462 | 0.00 | 0.00 | 37.25 | 2.52 |
4295 | 4576 | 6.314152 | GGGTGAGCATAAAACTCTAGTTCTTC | 59.686 | 42.308 | 0.00 | 0.00 | 37.25 | 2.87 |
4296 | 4577 | 6.314152 | GGTGAGCATAAAACTCTAGTTCTTCC | 59.686 | 42.308 | 0.00 | 0.00 | 37.25 | 3.46 |
4297 | 4578 | 6.874134 | GTGAGCATAAAACTCTAGTTCTTCCA | 59.126 | 38.462 | 0.00 | 0.00 | 37.25 | 3.53 |
4298 | 4579 | 7.387948 | GTGAGCATAAAACTCTAGTTCTTCCAA | 59.612 | 37.037 | 0.00 | 0.00 | 37.25 | 3.53 |
4299 | 4580 | 8.103305 | TGAGCATAAAACTCTAGTTCTTCCAAT | 58.897 | 33.333 | 0.00 | 0.00 | 37.25 | 3.16 |
4503 | 4786 | 1.066858 | GTGCTCGAGGAACATGAAGGA | 60.067 | 52.381 | 15.58 | 0.00 | 0.00 | 3.36 |
4579 | 4871 | 6.307155 | CAACTTGCTTACAGTATACTTGCAC | 58.693 | 40.000 | 15.00 | 2.33 | 0.00 | 4.57 |
4714 | 5006 | 0.317799 | ATCATCTAGCCAGAGCAGCG | 59.682 | 55.000 | 0.00 | 0.00 | 43.56 | 5.18 |
4753 | 5045 | 4.697756 | CCGGAACAGCGGCCTTCA | 62.698 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
4831 | 5123 | 3.181487 | CCCGACAATTCATCCCACATTTC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
4834 | 5126 | 4.675146 | CGACAATTCATCCCACATTTCACC | 60.675 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
4852 | 5146 | 9.918630 | CATTTCACCAAGTAAGAAAAATGAGAT | 57.081 | 29.630 | 0.00 | 0.00 | 35.62 | 2.75 |
4867 | 5210 | 4.644163 | ATGAGATACTACGTAGAGCCCT | 57.356 | 45.455 | 28.74 | 17.73 | 0.00 | 5.19 |
4873 | 5216 | 2.335092 | CTACGTAGAGCCCTCCCGGA | 62.335 | 65.000 | 17.95 | 0.00 | 0.00 | 5.14 |
4886 | 5229 | 2.166829 | CTCCCGGATGAGATACCTGAG | 58.833 | 57.143 | 0.73 | 0.00 | 34.11 | 3.35 |
4890 | 5233 | 2.036475 | CCGGATGAGATACCTGAGGTTG | 59.964 | 54.545 | 10.53 | 0.00 | 37.09 | 3.77 |
4892 | 5235 | 2.224402 | GGATGAGATACCTGAGGTTGGC | 60.224 | 54.545 | 10.53 | 0.00 | 37.09 | 4.52 |
4893 | 5236 | 2.254152 | TGAGATACCTGAGGTTGGCT | 57.746 | 50.000 | 10.53 | 4.74 | 37.09 | 4.75 |
4895 | 5238 | 2.292521 | TGAGATACCTGAGGTTGGCTCT | 60.293 | 50.000 | 10.53 | 7.42 | 37.09 | 4.09 |
4896 | 5239 | 3.052869 | TGAGATACCTGAGGTTGGCTCTA | 60.053 | 47.826 | 10.53 | 3.35 | 37.09 | 2.43 |
4897 | 5240 | 3.571590 | AGATACCTGAGGTTGGCTCTAG | 58.428 | 50.000 | 10.53 | 0.00 | 37.09 | 2.43 |
4899 | 5242 | 1.562783 | ACCTGAGGTTGGCTCTAGAC | 58.437 | 55.000 | 0.00 | 0.00 | 27.29 | 2.59 |
4900 | 5243 | 0.457851 | CCTGAGGTTGGCTCTAGACG | 59.542 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4901 | 5244 | 0.457851 | CTGAGGTTGGCTCTAGACGG | 59.542 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4902 | 5245 | 0.970937 | TGAGGTTGGCTCTAGACGGG | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 5.28 |
4903 | 5246 | 0.683504 | GAGGTTGGCTCTAGACGGGA | 60.684 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
4904 | 5247 | 0.684805 | AGGTTGGCTCTAGACGGGAG | 60.685 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4947 | 5290 | 1.741770 | GCCACTGCGACCTTACCAG | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
4977 | 5320 | 2.470821 | ACGAAGTGAAGAAACAGTCCG | 58.529 | 47.619 | 0.00 | 0.00 | 42.51 | 4.79 |
4985 | 5328 | 4.515567 | GTGAAGAAACAGTCCGAGGAAATT | 59.484 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
5025 | 5368 | 4.507710 | TCGCTGAAGTTTCTATGATGCTT | 58.492 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
5027 | 5370 | 4.330894 | CGCTGAAGTTTCTATGATGCTTGA | 59.669 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
5042 | 5385 | 2.630098 | TGCTTGAAGAGGGATATCTCCG | 59.370 | 50.000 | 0.00 | 0.00 | 43.11 | 4.63 |
5063 | 5406 | 1.011968 | TTCTCACCGGTGAAATCGCG | 61.012 | 55.000 | 35.36 | 23.26 | 39.39 | 5.87 |
5067 | 5410 | 2.025418 | ACCGGTGAAATCGCGACAC | 61.025 | 57.895 | 12.93 | 15.75 | 0.00 | 3.67 |
5068 | 5411 | 2.390288 | CGGTGAAATCGCGACACG | 59.610 | 61.111 | 12.93 | 8.23 | 45.62 | 4.49 |
5222 | 5888 | 0.897621 | CCGTTCTACCCGGGTTACTT | 59.102 | 55.000 | 35.42 | 9.04 | 41.78 | 2.24 |
5259 | 5925 | 1.035932 | CCTGGCCCTCATCTTTGCTG | 61.036 | 60.000 | 0.00 | 0.00 | 0.00 | 4.41 |
5260 | 5926 | 1.000521 | TGGCCCTCATCTTTGCTGG | 60.001 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
5261 | 5927 | 2.421399 | GGCCCTCATCTTTGCTGGC | 61.421 | 63.158 | 0.00 | 0.00 | 38.07 | 4.85 |
5262 | 5928 | 1.379576 | GCCCTCATCTTTGCTGGCT | 60.380 | 57.895 | 0.00 | 0.00 | 36.72 | 4.75 |
5263 | 5929 | 0.107017 | GCCCTCATCTTTGCTGGCTA | 60.107 | 55.000 | 0.00 | 0.00 | 36.72 | 3.93 |
5264 | 5930 | 1.964552 | CCCTCATCTTTGCTGGCTAG | 58.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.42 |
5265 | 5931 | 1.211457 | CCCTCATCTTTGCTGGCTAGT | 59.789 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
5268 | 5934 | 3.341823 | CTCATCTTTGCTGGCTAGTGTT | 58.658 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
5269 | 5935 | 3.338249 | TCATCTTTGCTGGCTAGTGTTC | 58.662 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
5270 | 5936 | 3.008375 | TCATCTTTGCTGGCTAGTGTTCT | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
5273 | 5942 | 2.638480 | TTGCTGGCTAGTGTTCTTGT | 57.362 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5278 | 5947 | 1.946768 | TGGCTAGTGTTCTTGTTGTGC | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
5279 | 5948 | 1.946768 | GGCTAGTGTTCTTGTTGTGCA | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
5285 | 5954 | 4.819769 | AGTGTTCTTGTTGTGCATTTGTT | 58.180 | 34.783 | 0.00 | 0.00 | 0.00 | 2.83 |
5305 | 5974 | 4.512944 | TGTTGCTGTTGAAGAGTCTTGATC | 59.487 | 41.667 | 10.90 | 1.48 | 0.00 | 2.92 |
5367 | 6037 | 3.308530 | CGTTGAAATGTTTTCTCAGCCC | 58.691 | 45.455 | 2.08 | 0.00 | 0.00 | 5.19 |
5368 | 6038 | 3.243367 | CGTTGAAATGTTTTCTCAGCCCA | 60.243 | 43.478 | 2.08 | 0.00 | 0.00 | 5.36 |
5369 | 6039 | 4.051237 | GTTGAAATGTTTTCTCAGCCCAC | 58.949 | 43.478 | 2.08 | 0.00 | 0.00 | 4.61 |
5370 | 6040 | 3.565307 | TGAAATGTTTTCTCAGCCCACT | 58.435 | 40.909 | 2.08 | 0.00 | 0.00 | 4.00 |
5371 | 6041 | 3.960102 | TGAAATGTTTTCTCAGCCCACTT | 59.040 | 39.130 | 2.08 | 0.00 | 0.00 | 3.16 |
5372 | 6042 | 4.037923 | TGAAATGTTTTCTCAGCCCACTTC | 59.962 | 41.667 | 2.08 | 0.00 | 0.00 | 3.01 |
5373 | 6043 | 3.515602 | ATGTTTTCTCAGCCCACTTCT | 57.484 | 42.857 | 0.00 | 0.00 | 0.00 | 2.85 |
5374 | 6044 | 3.297134 | TGTTTTCTCAGCCCACTTCTT | 57.703 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
5375 | 6045 | 3.214328 | TGTTTTCTCAGCCCACTTCTTC | 58.786 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
5376 | 6046 | 3.117888 | TGTTTTCTCAGCCCACTTCTTCT | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
5377 | 6047 | 3.864789 | TTTCTCAGCCCACTTCTTCTT | 57.135 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
5378 | 6048 | 3.409026 | TTCTCAGCCCACTTCTTCTTC | 57.591 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
5379 | 6049 | 1.273606 | TCTCAGCCCACTTCTTCTTCG | 59.726 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
5380 | 6050 | 0.321671 | TCAGCCCACTTCTTCTTCGG | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5381 | 6051 | 0.035458 | CAGCCCACTTCTTCTTCGGT | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
5382 | 6052 | 1.275291 | CAGCCCACTTCTTCTTCGGTA | 59.725 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
5383 | 6053 | 1.275573 | AGCCCACTTCTTCTTCGGTAC | 59.724 | 52.381 | 0.00 | 0.00 | 0.00 | 3.34 |
5384 | 6054 | 1.001633 | GCCCACTTCTTCTTCGGTACA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
5385 | 6055 | 2.549349 | GCCCACTTCTTCTTCGGTACAA | 60.549 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
5386 | 6056 | 3.064931 | CCCACTTCTTCTTCGGTACAAC | 58.935 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5387 | 6057 | 3.064931 | CCACTTCTTCTTCGGTACAACC | 58.935 | 50.000 | 0.00 | 0.00 | 34.05 | 3.77 |
5388 | 6058 | 3.064931 | CACTTCTTCTTCGGTACAACCC | 58.935 | 50.000 | 0.00 | 0.00 | 33.75 | 4.11 |
5389 | 6059 | 2.038164 | ACTTCTTCTTCGGTACAACCCC | 59.962 | 50.000 | 0.00 | 0.00 | 33.75 | 4.95 |
5390 | 6060 | 0.978907 | TCTTCTTCGGTACAACCCCC | 59.021 | 55.000 | 0.00 | 0.00 | 33.75 | 5.40 |
5391 | 6061 | 0.981943 | CTTCTTCGGTACAACCCCCT | 59.018 | 55.000 | 0.00 | 0.00 | 33.75 | 4.79 |
5392 | 6062 | 0.688487 | TTCTTCGGTACAACCCCCTG | 59.312 | 55.000 | 0.00 | 0.00 | 33.75 | 4.45 |
5393 | 6063 | 0.178926 | TCTTCGGTACAACCCCCTGA | 60.179 | 55.000 | 0.00 | 0.00 | 33.75 | 3.86 |
5394 | 6064 | 0.688487 | CTTCGGTACAACCCCCTGAA | 59.312 | 55.000 | 0.00 | 0.00 | 33.75 | 3.02 |
5395 | 6065 | 1.072648 | CTTCGGTACAACCCCCTGAAA | 59.927 | 52.381 | 0.00 | 0.00 | 33.75 | 2.69 |
5396 | 6066 | 1.138568 | TCGGTACAACCCCCTGAAAA | 58.861 | 50.000 | 0.00 | 0.00 | 33.75 | 2.29 |
5397 | 6067 | 1.202794 | TCGGTACAACCCCCTGAAAAC | 60.203 | 52.381 | 0.00 | 0.00 | 33.75 | 2.43 |
5398 | 6068 | 1.477195 | CGGTACAACCCCCTGAAAACA | 60.477 | 52.381 | 0.00 | 0.00 | 33.75 | 2.83 |
5399 | 6069 | 2.816337 | CGGTACAACCCCCTGAAAACAT | 60.816 | 50.000 | 0.00 | 0.00 | 33.75 | 2.71 |
5400 | 6070 | 2.823747 | GGTACAACCCCCTGAAAACATC | 59.176 | 50.000 | 0.00 | 0.00 | 30.04 | 3.06 |
5401 | 6071 | 2.765689 | ACAACCCCCTGAAAACATCA | 57.234 | 45.000 | 0.00 | 0.00 | 36.38 | 3.07 |
5402 | 6072 | 3.039252 | ACAACCCCCTGAAAACATCAA | 57.961 | 42.857 | 0.00 | 0.00 | 37.67 | 2.57 |
5403 | 6073 | 2.698274 | ACAACCCCCTGAAAACATCAAC | 59.302 | 45.455 | 0.00 | 0.00 | 37.67 | 3.18 |
5404 | 6074 | 1.616159 | ACCCCCTGAAAACATCAACG | 58.384 | 50.000 | 0.00 | 0.00 | 37.67 | 4.10 |
5405 | 6075 | 0.887933 | CCCCCTGAAAACATCAACGG | 59.112 | 55.000 | 0.00 | 0.00 | 37.67 | 4.44 |
5406 | 6076 | 1.616159 | CCCCTGAAAACATCAACGGT | 58.384 | 50.000 | 0.00 | 0.00 | 37.67 | 4.83 |
5407 | 6077 | 1.539827 | CCCCTGAAAACATCAACGGTC | 59.460 | 52.381 | 0.00 | 0.00 | 37.67 | 4.79 |
5408 | 6078 | 1.539827 | CCCTGAAAACATCAACGGTCC | 59.460 | 52.381 | 0.00 | 0.00 | 37.67 | 4.46 |
5409 | 6079 | 2.226330 | CCTGAAAACATCAACGGTCCA | 58.774 | 47.619 | 0.00 | 0.00 | 37.67 | 4.02 |
5410 | 6080 | 2.226437 | CCTGAAAACATCAACGGTCCAG | 59.774 | 50.000 | 0.00 | 0.00 | 37.67 | 3.86 |
5411 | 6081 | 3.138304 | CTGAAAACATCAACGGTCCAGA | 58.862 | 45.455 | 0.00 | 0.00 | 37.67 | 3.86 |
5412 | 6082 | 3.750371 | TGAAAACATCAACGGTCCAGAT | 58.250 | 40.909 | 0.00 | 0.00 | 34.30 | 2.90 |
5413 | 6083 | 3.751175 | TGAAAACATCAACGGTCCAGATC | 59.249 | 43.478 | 0.00 | 0.00 | 34.30 | 2.75 |
5414 | 6084 | 2.010145 | AACATCAACGGTCCAGATCG | 57.990 | 50.000 | 0.00 | 0.00 | 41.46 | 3.69 |
5420 | 6090 | 3.823369 | ACGGTCCAGATCGTCCTAT | 57.177 | 52.632 | 0.00 | 0.00 | 46.40 | 2.57 |
5421 | 6091 | 2.945080 | ACGGTCCAGATCGTCCTATA | 57.055 | 50.000 | 0.00 | 0.00 | 46.40 | 1.31 |
5422 | 6092 | 2.502295 | ACGGTCCAGATCGTCCTATAC | 58.498 | 52.381 | 0.00 | 0.00 | 46.40 | 1.47 |
5423 | 6093 | 1.811359 | CGGTCCAGATCGTCCTATACC | 59.189 | 57.143 | 0.00 | 0.00 | 0.00 | 2.73 |
5424 | 6094 | 2.169330 | GGTCCAGATCGTCCTATACCC | 58.831 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
5425 | 6095 | 2.169330 | GTCCAGATCGTCCTATACCCC | 58.831 | 57.143 | 0.00 | 0.00 | 0.00 | 4.95 |
5426 | 6096 | 2.071372 | TCCAGATCGTCCTATACCCCT | 58.929 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
5427 | 6097 | 2.449730 | TCCAGATCGTCCTATACCCCTT | 59.550 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
5428 | 6098 | 2.826725 | CCAGATCGTCCTATACCCCTTC | 59.173 | 54.545 | 0.00 | 0.00 | 0.00 | 3.46 |
5429 | 6099 | 2.488545 | CAGATCGTCCTATACCCCTTCG | 59.511 | 54.545 | 0.00 | 0.00 | 0.00 | 3.79 |
5430 | 6100 | 1.201880 | GATCGTCCTATACCCCTTCGC | 59.798 | 57.143 | 0.00 | 0.00 | 0.00 | 4.70 |
5431 | 6101 | 0.825010 | TCGTCCTATACCCCTTCGCC | 60.825 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
5432 | 6102 | 0.826672 | CGTCCTATACCCCTTCGCCT | 60.827 | 60.000 | 0.00 | 0.00 | 0.00 | 5.52 |
5433 | 6103 | 0.680061 | GTCCTATACCCCTTCGCCTG | 59.320 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
5434 | 6104 | 0.559205 | TCCTATACCCCTTCGCCTGA | 59.441 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5435 | 6105 | 1.062734 | TCCTATACCCCTTCGCCTGAA | 60.063 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
5436 | 6106 | 1.766496 | CCTATACCCCTTCGCCTGAAA | 59.234 | 52.381 | 0.00 | 0.00 | 32.66 | 2.69 |
5437 | 6107 | 2.171870 | CCTATACCCCTTCGCCTGAAAA | 59.828 | 50.000 | 0.00 | 0.00 | 32.66 | 2.29 |
5438 | 6108 | 2.124277 | ATACCCCTTCGCCTGAAAAC | 57.876 | 50.000 | 0.00 | 0.00 | 32.66 | 2.43 |
5439 | 6109 | 1.061546 | TACCCCTTCGCCTGAAAACT | 58.938 | 50.000 | 0.00 | 0.00 | 32.66 | 2.66 |
5440 | 6110 | 0.185175 | ACCCCTTCGCCTGAAAACTT | 59.815 | 50.000 | 0.00 | 0.00 | 32.66 | 2.66 |
5441 | 6111 | 1.422402 | ACCCCTTCGCCTGAAAACTTA | 59.578 | 47.619 | 0.00 | 0.00 | 32.66 | 2.24 |
5442 | 6112 | 2.158579 | ACCCCTTCGCCTGAAAACTTAA | 60.159 | 45.455 | 0.00 | 0.00 | 32.66 | 1.85 |
5443 | 6113 | 2.888414 | CCCCTTCGCCTGAAAACTTAAA | 59.112 | 45.455 | 0.00 | 0.00 | 32.66 | 1.52 |
5444 | 6114 | 3.319689 | CCCCTTCGCCTGAAAACTTAAAA | 59.680 | 43.478 | 0.00 | 0.00 | 32.66 | 1.52 |
5445 | 6115 | 4.202172 | CCCCTTCGCCTGAAAACTTAAAAA | 60.202 | 41.667 | 0.00 | 0.00 | 32.66 | 1.94 |
5464 | 6134 | 2.736670 | AAGGGTAGGATGGTCATTGC | 57.263 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
5465 | 6135 | 0.846693 | AGGGTAGGATGGTCATTGCC | 59.153 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
5466 | 6136 | 0.178990 | GGGTAGGATGGTCATTGCCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
5467 | 6137 | 0.178990 | GGTAGGATGGTCATTGCCCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
5468 | 6138 | 0.846693 | GTAGGATGGTCATTGCCCCT | 59.153 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5469 | 6139 | 0.846015 | TAGGATGGTCATTGCCCCTG | 59.154 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
5470 | 6140 | 2.129785 | GGATGGTCATTGCCCCTGC | 61.130 | 63.158 | 0.00 | 0.00 | 38.26 | 4.85 |
5471 | 6141 | 2.042639 | ATGGTCATTGCCCCTGCC | 60.043 | 61.111 | 0.00 | 0.00 | 36.33 | 4.85 |
5472 | 6142 | 3.684369 | ATGGTCATTGCCCCTGCCC | 62.684 | 63.158 | 0.00 | 0.00 | 36.33 | 5.36 |
5474 | 6144 | 4.066139 | GTCATTGCCCCTGCCCCT | 62.066 | 66.667 | 0.00 | 0.00 | 36.33 | 4.79 |
5475 | 6145 | 3.743017 | TCATTGCCCCTGCCCCTC | 61.743 | 66.667 | 0.00 | 0.00 | 36.33 | 4.30 |
5476 | 6146 | 4.847367 | CATTGCCCCTGCCCCTCC | 62.847 | 72.222 | 0.00 | 0.00 | 36.33 | 4.30 |
5522 | 6192 | 4.842091 | GCGCCCGTCGACGTATGT | 62.842 | 66.667 | 33.49 | 0.00 | 41.67 | 2.29 |
5523 | 6193 | 2.708865 | CGCCCGTCGACGTATGTA | 59.291 | 61.111 | 33.49 | 0.00 | 41.67 | 2.29 |
5524 | 6194 | 1.652329 | CGCCCGTCGACGTATGTAC | 60.652 | 63.158 | 33.49 | 15.99 | 41.67 | 2.90 |
5535 | 6205 | 1.523501 | CGTATGTACGTGTACGCGTT | 58.476 | 50.000 | 35.98 | 22.31 | 43.04 | 4.84 |
5536 | 6206 | 1.904412 | CGTATGTACGTGTACGCGTTT | 59.096 | 47.619 | 35.98 | 23.37 | 43.04 | 3.60 |
5537 | 6207 | 2.338228 | CGTATGTACGTGTACGCGTTTT | 59.662 | 45.455 | 35.98 | 23.06 | 43.04 | 2.43 |
5538 | 6208 | 3.181554 | CGTATGTACGTGTACGCGTTTTT | 60.182 | 43.478 | 35.98 | 22.75 | 43.04 | 1.94 |
5558 | 6228 | 2.728690 | TTTACTGTGGCGACATACGT | 57.271 | 45.000 | 0.69 | 0.00 | 46.14 | 3.57 |
5559 | 6229 | 2.728690 | TTACTGTGGCGACATACGTT | 57.271 | 45.000 | 0.69 | 0.00 | 46.14 | 3.99 |
5560 | 6230 | 2.267188 | TACTGTGGCGACATACGTTC | 57.733 | 50.000 | 0.69 | 0.00 | 46.14 | 3.95 |
5561 | 6231 | 0.601558 | ACTGTGGCGACATACGTTCT | 59.398 | 50.000 | 0.69 | 0.00 | 46.14 | 3.01 |
5562 | 6232 | 1.000506 | ACTGTGGCGACATACGTTCTT | 59.999 | 47.619 | 0.69 | 0.00 | 46.14 | 2.52 |
5563 | 6233 | 2.066262 | CTGTGGCGACATACGTTCTTT | 58.934 | 47.619 | 0.69 | 0.00 | 46.14 | 2.52 |
5564 | 6234 | 2.478894 | CTGTGGCGACATACGTTCTTTT | 59.521 | 45.455 | 0.69 | 0.00 | 46.14 | 2.27 |
5565 | 6235 | 2.873472 | TGTGGCGACATACGTTCTTTTT | 59.127 | 40.909 | 0.00 | 0.00 | 46.14 | 1.94 |
5566 | 6236 | 4.056740 | TGTGGCGACATACGTTCTTTTTA | 58.943 | 39.130 | 0.00 | 0.00 | 46.14 | 1.52 |
5567 | 6237 | 4.084433 | TGTGGCGACATACGTTCTTTTTAC | 60.084 | 41.667 | 0.00 | 0.00 | 46.14 | 2.01 |
5568 | 6238 | 3.432933 | TGGCGACATACGTTCTTTTTACC | 59.567 | 43.478 | 0.00 | 0.00 | 44.60 | 2.85 |
5569 | 6239 | 3.482436 | GGCGACATACGTTCTTTTTACCG | 60.482 | 47.826 | 0.00 | 0.00 | 44.60 | 4.02 |
5570 | 6240 | 3.652478 | CGACATACGTTCTTTTTACCGC | 58.348 | 45.455 | 0.00 | 0.00 | 37.22 | 5.68 |
5571 | 6241 | 3.652478 | GACATACGTTCTTTTTACCGCG | 58.348 | 45.455 | 0.00 | 0.00 | 0.00 | 6.46 |
5572 | 6242 | 3.059166 | ACATACGTTCTTTTTACCGCGT | 58.941 | 40.909 | 4.92 | 0.00 | 36.52 | 6.01 |
5573 | 6243 | 4.233789 | ACATACGTTCTTTTTACCGCGTA | 58.766 | 39.130 | 4.92 | 0.00 | 38.78 | 4.42 |
5574 | 6244 | 4.324402 | ACATACGTTCTTTTTACCGCGTAG | 59.676 | 41.667 | 4.92 | 0.00 | 38.04 | 3.51 |
5584 | 6254 | 2.813908 | CCGCGTAGGTGGTCAAGC | 60.814 | 66.667 | 4.92 | 0.00 | 39.07 | 4.01 |
5585 | 6255 | 2.048597 | CGCGTAGGTGGTCAAGCA | 60.049 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
5586 | 6256 | 2.380410 | CGCGTAGGTGGTCAAGCAC | 61.380 | 63.158 | 0.00 | 3.77 | 0.00 | 4.40 |
5587 | 6257 | 2.380410 | GCGTAGGTGGTCAAGCACG | 61.380 | 63.158 | 6.28 | 0.00 | 35.40 | 5.34 |
5588 | 6258 | 1.006571 | CGTAGGTGGTCAAGCACGT | 60.007 | 57.895 | 11.63 | 11.63 | 0.00 | 4.49 |
5589 | 6259 | 1.007336 | CGTAGGTGGTCAAGCACGTC | 61.007 | 60.000 | 10.42 | 3.56 | 0.00 | 4.34 |
5590 | 6260 | 1.007336 | GTAGGTGGTCAAGCACGTCG | 61.007 | 60.000 | 10.42 | 0.00 | 0.00 | 5.12 |
5591 | 6261 | 2.149803 | TAGGTGGTCAAGCACGTCGG | 62.150 | 60.000 | 10.42 | 0.00 | 0.00 | 4.79 |
5592 | 6262 | 2.279918 | GTGGTCAAGCACGTCGGT | 60.280 | 61.111 | 0.00 | 0.00 | 0.00 | 4.69 |
5594 | 6264 | 3.041940 | GGTCAAGCACGTCGGTGG | 61.042 | 66.667 | 0.00 | 0.00 | 44.54 | 4.61 |
5600 | 6270 | 2.629763 | GCACGTCGGTGGTCAAAC | 59.370 | 61.111 | 0.00 | 0.00 | 44.54 | 2.93 |
5601 | 6271 | 2.888998 | GCACGTCGGTGGTCAAACC | 61.889 | 63.158 | 0.00 | 0.00 | 44.54 | 3.27 |
5608 | 6278 | 4.364409 | GTGGTCAAACCGCGCGTC | 62.364 | 66.667 | 29.95 | 10.96 | 42.58 | 5.19 |
5630 | 6300 | 4.072088 | GGTGAAAGCGCGTCGTGG | 62.072 | 66.667 | 8.43 | 0.00 | 0.00 | 4.94 |
5631 | 6301 | 4.719616 | GTGAAAGCGCGTCGTGGC | 62.720 | 66.667 | 8.43 | 5.13 | 0.00 | 5.01 |
5641 | 6311 | 4.059459 | GTCGTGGCGCGTGAACTG | 62.059 | 66.667 | 20.88 | 1.28 | 42.13 | 3.16 |
5677 | 6347 | 3.812019 | CGTCCGTCCCCTCGTCTG | 61.812 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
5678 | 6348 | 4.131088 | GTCCGTCCCCTCGTCTGC | 62.131 | 72.222 | 0.00 | 0.00 | 0.00 | 4.26 |
5742 | 6412 | 2.128035 | GACTGCCGTCGAATTGATAGG | 58.872 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
5743 | 6413 | 0.861837 | CTGCCGTCGAATTGATAGGC | 59.138 | 55.000 | 11.43 | 11.43 | 46.87 | 3.93 |
5744 | 6414 | 0.531974 | TGCCGTCGAATTGATAGGCC | 60.532 | 55.000 | 14.45 | 0.00 | 46.45 | 5.19 |
5745 | 6415 | 0.531974 | GCCGTCGAATTGATAGGCCA | 60.532 | 55.000 | 5.01 | 0.00 | 43.36 | 5.36 |
5746 | 6416 | 1.948104 | CCGTCGAATTGATAGGCCAA | 58.052 | 50.000 | 5.01 | 0.00 | 0.00 | 4.52 |
5747 | 6417 | 1.597663 | CCGTCGAATTGATAGGCCAAC | 59.402 | 52.381 | 5.01 | 0.00 | 0.00 | 3.77 |
5748 | 6418 | 1.257936 | CGTCGAATTGATAGGCCAACG | 59.742 | 52.381 | 5.01 | 0.00 | 0.00 | 4.10 |
5749 | 6419 | 2.546778 | GTCGAATTGATAGGCCAACGA | 58.453 | 47.619 | 5.01 | 0.96 | 0.00 | 3.85 |
5750 | 6420 | 2.284417 | GTCGAATTGATAGGCCAACGAC | 59.716 | 50.000 | 5.01 | 10.00 | 37.91 | 4.34 |
5751 | 6421 | 1.597663 | CGAATTGATAGGCCAACGACC | 59.402 | 52.381 | 5.01 | 0.00 | 0.00 | 4.79 |
5752 | 6422 | 1.947456 | GAATTGATAGGCCAACGACCC | 59.053 | 52.381 | 5.01 | 0.00 | 0.00 | 4.46 |
5753 | 6423 | 0.179056 | ATTGATAGGCCAACGACCCG | 60.179 | 55.000 | 5.01 | 0.00 | 0.00 | 5.28 |
5754 | 6424 | 1.546589 | TTGATAGGCCAACGACCCGT | 61.547 | 55.000 | 5.01 | 0.00 | 43.97 | 5.28 |
5755 | 6425 | 1.227176 | GATAGGCCAACGACCCGTC | 60.227 | 63.158 | 5.01 | 0.00 | 39.99 | 4.79 |
5756 | 6426 | 2.639883 | GATAGGCCAACGACCCGTCC | 62.640 | 65.000 | 5.01 | 0.00 | 39.99 | 4.79 |
5782 | 6452 | 2.116772 | CCCCGCCGTCTCCCTATA | 59.883 | 66.667 | 0.00 | 0.00 | 0.00 | 1.31 |
5783 | 6453 | 1.532316 | CCCCGCCGTCTCCCTATAA | 60.532 | 63.158 | 0.00 | 0.00 | 0.00 | 0.98 |
5784 | 6454 | 1.117142 | CCCCGCCGTCTCCCTATAAA | 61.117 | 60.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5785 | 6455 | 0.974383 | CCCGCCGTCTCCCTATAAAT | 59.026 | 55.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5786 | 6456 | 1.067071 | CCCGCCGTCTCCCTATAAATC | 60.067 | 57.143 | 0.00 | 0.00 | 0.00 | 2.17 |
5787 | 6457 | 1.893801 | CCGCCGTCTCCCTATAAATCT | 59.106 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
5788 | 6458 | 2.094649 | CCGCCGTCTCCCTATAAATCTC | 60.095 | 54.545 | 0.00 | 0.00 | 0.00 | 2.75 |
5789 | 6459 | 2.557056 | CGCCGTCTCCCTATAAATCTCA | 59.443 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
5790 | 6460 | 3.612004 | CGCCGTCTCCCTATAAATCTCAC | 60.612 | 52.174 | 0.00 | 0.00 | 0.00 | 3.51 |
5791 | 6461 | 3.306156 | GCCGTCTCCCTATAAATCTCACC | 60.306 | 52.174 | 0.00 | 0.00 | 0.00 | 4.02 |
5792 | 6462 | 3.258622 | CCGTCTCCCTATAAATCTCACCC | 59.741 | 52.174 | 0.00 | 0.00 | 0.00 | 4.61 |
5793 | 6463 | 3.258622 | CGTCTCCCTATAAATCTCACCCC | 59.741 | 52.174 | 0.00 | 0.00 | 0.00 | 4.95 |
5794 | 6464 | 3.583526 | GTCTCCCTATAAATCTCACCCCC | 59.416 | 52.174 | 0.00 | 0.00 | 0.00 | 5.40 |
5795 | 6465 | 2.567615 | CTCCCTATAAATCTCACCCCCG | 59.432 | 54.545 | 0.00 | 0.00 | 0.00 | 5.73 |
5796 | 6466 | 2.090380 | TCCCTATAAATCTCACCCCCGT | 60.090 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
5797 | 6467 | 2.302157 | CCCTATAAATCTCACCCCCGTC | 59.698 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
5798 | 6468 | 2.302157 | CCTATAAATCTCACCCCCGTCC | 59.698 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
5799 | 6469 | 0.756903 | ATAAATCTCACCCCCGTCCG | 59.243 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5800 | 6470 | 1.963464 | TAAATCTCACCCCCGTCCGC | 61.963 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
83 | 85 | 8.744652 | TGAATAGTTAATACCACAACAAATGGG | 58.255 | 33.333 | 0.00 | 0.00 | 41.97 | 4.00 |
219 | 223 | 5.534207 | TCAGGAACTTTGCAAATTCATGT | 57.466 | 34.783 | 27.86 | 16.78 | 34.60 | 3.21 |
390 | 401 | 4.630894 | TCACATCCCGCAAATTTGATAC | 57.369 | 40.909 | 22.31 | 3.37 | 0.00 | 2.24 |
420 | 431 | 6.804677 | TCTGATGAAACTCTTAGAGCAGATC | 58.195 | 40.000 | 9.44 | 6.66 | 32.04 | 2.75 |
452 | 472 | 7.786178 | ATATAAGTGCTTCGACTTTTGCATA | 57.214 | 32.000 | 0.00 | 0.00 | 37.38 | 3.14 |
453 | 473 | 6.683974 | ATATAAGTGCTTCGACTTTTGCAT | 57.316 | 33.333 | 0.00 | 0.00 | 37.38 | 3.96 |
507 | 528 | 4.096382 | GCAATTTCGGTTACATCACATCCT | 59.904 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
513 | 534 | 5.009110 | TGAGTTTGCAATTTCGGTTACATCA | 59.991 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
562 | 583 | 6.586082 | GCCATTGCGAAATAATTGTATAAGGG | 59.414 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
568 | 589 | 5.574830 | GTGTTGCCATTGCGAAATAATTGTA | 59.425 | 36.000 | 0.00 | 0.00 | 41.78 | 2.41 |
592 | 613 | 3.510388 | TCCTAGTCATCGAGCTTGTTG | 57.490 | 47.619 | 5.75 | 5.75 | 0.00 | 3.33 |
833 | 892 | 2.510691 | GATTTTCGCCGGCGGAGA | 60.511 | 61.111 | 44.95 | 35.40 | 40.25 | 3.71 |
1018 | 1081 | 1.080705 | GCGCCGCGGAGTATATTCT | 60.081 | 57.895 | 33.48 | 0.00 | 0.00 | 2.40 |
1079 | 1142 | 4.479993 | AGTCCCTGCTGCCATCGC | 62.480 | 66.667 | 0.00 | 0.00 | 0.00 | 4.58 |
1269 | 1338 | 1.227764 | CGACAGGGAGATGGGCATG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 4.06 |
1386 | 1455 | 2.279252 | CGAAGTATGTCGCCCCGG | 60.279 | 66.667 | 0.00 | 0.00 | 33.66 | 5.73 |
1502 | 1571 | 1.134670 | GCAGAATGGCTAAGAGACCGT | 60.135 | 52.381 | 0.00 | 0.00 | 35.86 | 4.83 |
1556 | 1632 | 4.261614 | CGAATGATGAATGTAGGGTCGAGA | 60.262 | 45.833 | 0.00 | 0.00 | 0.00 | 4.04 |
1563 | 1639 | 3.873361 | AGCACACGAATGATGAATGTAGG | 59.127 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
1579 | 1655 | 2.622942 | TGGGAAGTTCAATTCAGCACAC | 59.377 | 45.455 | 5.01 | 0.00 | 0.00 | 3.82 |
1674 | 1757 | 5.700832 | TGACACACTGACATTCCAAATCTAC | 59.299 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1691 | 1774 | 6.064846 | AGAATCAACTTCAATGTGACACAC | 57.935 | 37.500 | 11.22 | 1.42 | 36.24 | 3.82 |
1776 | 1863 | 7.397476 | ACACTCTAACAAGAAGAGGACATCATA | 59.603 | 37.037 | 5.21 | 0.00 | 43.98 | 2.15 |
1780 | 1867 | 5.305644 | ACACACTCTAACAAGAAGAGGACAT | 59.694 | 40.000 | 5.21 | 0.00 | 43.98 | 3.06 |
1809 | 1896 | 3.884693 | TGTCAGACATGCATGAACAAACT | 59.115 | 39.130 | 32.75 | 16.69 | 0.00 | 2.66 |
1812 | 1899 | 3.742385 | TCTGTCAGACATGCATGAACAA | 58.258 | 40.909 | 32.75 | 12.45 | 0.00 | 2.83 |
1814 | 1901 | 3.487042 | GCATCTGTCAGACATGCATGAAC | 60.487 | 47.826 | 32.75 | 23.27 | 35.00 | 3.18 |
1887 | 1974 | 5.611374 | AGGGACATCTATTACCAAATGACG | 58.389 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
1987 | 2081 | 9.883142 | TGTTTTAAAGTTGATTTTCCTTGTCAT | 57.117 | 25.926 | 0.00 | 0.00 | 32.01 | 3.06 |
2147 | 2246 | 8.375506 | ACTGTATTACTGGAATTTCTTGACTCA | 58.624 | 33.333 | 5.80 | 0.00 | 0.00 | 3.41 |
2153 | 2252 | 7.335422 | CAGAGCACTGTATTACTGGAATTTCTT | 59.665 | 37.037 | 2.59 | 0.00 | 39.11 | 2.52 |
2191 | 2290 | 6.094464 | CACTACAATTCAATGCCAGATTGAGA | 59.906 | 38.462 | 0.00 | 0.00 | 38.98 | 3.27 |
2233 | 2333 | 2.738743 | ACAACAGCAATAATCAGGGGG | 58.261 | 47.619 | 0.00 | 0.00 | 0.00 | 5.40 |
2235 | 2335 | 4.497300 | CCAAACAACAGCAATAATCAGGG | 58.503 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
2265 | 2365 | 5.352284 | ACTCTACAAAGTGAACAGTGACTG | 58.648 | 41.667 | 11.70 | 11.70 | 37.52 | 3.51 |
2291 | 2391 | 9.251440 | TCAGTAAATTTGAAGTAGTAGGAGCTA | 57.749 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
2292 | 2392 | 8.135382 | TCAGTAAATTTGAAGTAGTAGGAGCT | 57.865 | 34.615 | 0.00 | 0.00 | 0.00 | 4.09 |
2293 | 2393 | 8.773404 | TTCAGTAAATTTGAAGTAGTAGGAGC | 57.227 | 34.615 | 0.00 | 0.00 | 31.35 | 4.70 |
2479 | 2594 | 3.636231 | CTCACCCCCACTTGGCGA | 61.636 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
2525 | 2640 | 6.595772 | CTTGTAAAGCAGCTACTTATCCTG | 57.404 | 41.667 | 0.00 | 0.00 | 36.98 | 3.86 |
2601 | 2716 | 8.934023 | AGGGTCACACTAATCTGAAATAAAAA | 57.066 | 30.769 | 0.00 | 0.00 | 0.00 | 1.94 |
2651 | 2766 | 7.999679 | TGATTTCATGGATAATGACAACCTTC | 58.000 | 34.615 | 0.00 | 0.00 | 45.17 | 3.46 |
2740 | 2857 | 4.759693 | CCGTTAGGAATATAGCATGCCAAA | 59.240 | 41.667 | 15.66 | 0.00 | 41.02 | 3.28 |
2741 | 2858 | 4.041075 | TCCGTTAGGAATATAGCATGCCAA | 59.959 | 41.667 | 15.66 | 2.91 | 45.12 | 4.52 |
2761 | 2878 | 3.354089 | ACTGAACAAACAAATGCTCCG | 57.646 | 42.857 | 0.00 | 0.00 | 0.00 | 4.63 |
2948 | 3071 | 7.070322 | ACACTACTAAGTTTTGTAGGTCCTTCA | 59.930 | 37.037 | 14.74 | 0.00 | 39.65 | 3.02 |
3136 | 3259 | 2.280186 | GATCACCGGGATGGACGC | 60.280 | 66.667 | 6.32 | 0.00 | 42.00 | 5.19 |
3225 | 3348 | 6.183360 | CCCGTTTTAACATTTCGGCAAAATAG | 60.183 | 38.462 | 0.00 | 0.00 | 39.87 | 1.73 |
3247 | 3370 | 4.430908 | CTTTTAAGCACTACTAGGTCCCG | 58.569 | 47.826 | 0.00 | 0.00 | 0.00 | 5.14 |
3287 | 3564 | 6.221659 | TCTGCATGAATGAGCTACTAGAATG | 58.778 | 40.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3416 | 3697 | 1.134907 | CAGGGGAACGTGCGTAGTATT | 60.135 | 52.381 | 0.00 | 0.00 | 39.65 | 1.89 |
3427 | 3708 | 2.213499 | GCTGTAATGATCAGGGGAACG | 58.787 | 52.381 | 0.09 | 0.00 | 33.98 | 3.95 |
3814 | 4095 | 7.862873 | TCAAGAGAGTTGTTGCATATATACTCG | 59.137 | 37.037 | 5.74 | 0.00 | 37.62 | 4.18 |
3890 | 4171 | 4.458989 | GGTTATGCTTGTCACCATCTTCAA | 59.541 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
3906 | 4187 | 5.402398 | CAAAGAGCAAAGGTAAGGTTATGC | 58.598 | 41.667 | 0.00 | 0.00 | 0.00 | 3.14 |
3929 | 4210 | 5.574443 | GTCTATTTCATCAAGTGGCAAAAGC | 59.426 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3962 | 4243 | 1.374947 | GTGCCACTCCAGTAAGCCA | 59.625 | 57.895 | 0.00 | 0.00 | 0.00 | 4.75 |
4025 | 4306 | 1.073964 | CACGACACTCTTCATGCAGG | 58.926 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4043 | 4324 | 1.757682 | GGTGAATTATTGGACCGGCA | 58.242 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
4089 | 4370 | 5.122869 | CCATAGGAACAAAGTCATGTGTCAG | 59.877 | 44.000 | 0.00 | 0.00 | 32.81 | 3.51 |
4209 | 4490 | 1.401905 | GCCTTCCATTTAGCAAGACCG | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
4239 | 4520 | 5.073691 | CCCCAGAACCCTTGTATGAATAGAT | 59.926 | 44.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4274 | 4555 | 7.907214 | TTGGAAGAACTAGAGTTTTATGCTC | 57.093 | 36.000 | 0.00 | 0.00 | 38.56 | 4.26 |
4288 | 4569 | 9.574516 | AACAGAGTTTACAATATTGGAAGAACT | 57.425 | 29.630 | 19.37 | 16.92 | 31.55 | 3.01 |
4289 | 4570 | 9.827411 | GAACAGAGTTTACAATATTGGAAGAAC | 57.173 | 33.333 | 19.37 | 12.74 | 31.55 | 3.01 |
4290 | 4571 | 9.010029 | GGAACAGAGTTTACAATATTGGAAGAA | 57.990 | 33.333 | 19.37 | 0.54 | 31.55 | 2.52 |
4291 | 4572 | 8.160765 | TGGAACAGAGTTTACAATATTGGAAGA | 58.839 | 33.333 | 19.37 | 5.91 | 31.55 | 2.87 |
4292 | 4573 | 8.335532 | TGGAACAGAGTTTACAATATTGGAAG | 57.664 | 34.615 | 19.37 | 7.60 | 31.55 | 3.46 |
4503 | 4786 | 1.229428 | GCAGTATGTGTGTGCACTGT | 58.771 | 50.000 | 19.41 | 2.03 | 45.44 | 3.55 |
4552 | 4835 | 6.170506 | CAAGTATACTGTAAGCAAGTTGGGA | 58.829 | 40.000 | 6.06 | 0.00 | 37.60 | 4.37 |
4579 | 4871 | 4.271049 | ACAGAGATACGCGAAAATGAATGG | 59.729 | 41.667 | 15.93 | 0.00 | 0.00 | 3.16 |
4714 | 5006 | 4.246458 | GGTTTGTCCTGACACAGAGATAC | 58.754 | 47.826 | 0.00 | 0.00 | 41.67 | 2.24 |
4753 | 5045 | 1.848886 | GACGGACAACCTCCCCCATT | 61.849 | 60.000 | 0.00 | 0.00 | 35.21 | 3.16 |
4852 | 5146 | 0.107456 | CGGGAGGGCTCTACGTAGTA | 59.893 | 60.000 | 21.53 | 8.29 | 45.11 | 1.82 |
4867 | 5210 | 1.203063 | CCTCAGGTATCTCATCCGGGA | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 5.14 |
4873 | 5216 | 2.703007 | GAGCCAACCTCAGGTATCTCAT | 59.297 | 50.000 | 0.00 | 0.00 | 40.45 | 2.90 |
4886 | 5229 | 1.817209 | CTCCCGTCTAGAGCCAACC | 59.183 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
4900 | 5243 | 4.097361 | GACCTGGGTTCGGCTCCC | 62.097 | 72.222 | 0.00 | 4.04 | 44.81 | 4.30 |
4901 | 5244 | 3.316573 | CTGACCTGGGTTCGGCTCC | 62.317 | 68.421 | 0.00 | 0.00 | 0.00 | 4.70 |
4902 | 5245 | 2.266055 | CTGACCTGGGTTCGGCTC | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
4903 | 5246 | 4.021925 | GCTGACCTGGGTTCGGCT | 62.022 | 66.667 | 10.10 | 0.00 | 0.00 | 5.52 |
4904 | 5247 | 3.842925 | TTGCTGACCTGGGTTCGGC | 62.843 | 63.158 | 10.38 | 10.38 | 0.00 | 5.54 |
4905 | 5248 | 1.672356 | CTTGCTGACCTGGGTTCGG | 60.672 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
4930 | 5273 | 0.389948 | GACTGGTAAGGTCGCAGTGG | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4947 | 5290 | 7.184106 | TGTTTCTTCACTTCGTAAAATGTGAC | 58.816 | 34.615 | 0.00 | 0.00 | 38.87 | 3.67 |
4977 | 5320 | 8.511604 | TGAAATCAGTATTCAGGAATTTCCTC | 57.488 | 34.615 | 15.24 | 4.12 | 45.66 | 3.71 |
4985 | 5328 | 5.052481 | CAGCGATGAAATCAGTATTCAGGA | 58.948 | 41.667 | 0.00 | 0.00 | 45.97 | 3.86 |
5025 | 5368 | 3.117093 | AGAACCGGAGATATCCCTCTTCA | 60.117 | 47.826 | 9.46 | 0.00 | 33.79 | 3.02 |
5027 | 5370 | 3.117093 | TGAGAACCGGAGATATCCCTCTT | 60.117 | 47.826 | 9.46 | 0.00 | 33.79 | 2.85 |
5042 | 5385 | 1.076332 | CGATTTCACCGGTGAGAACC | 58.924 | 55.000 | 34.25 | 23.92 | 41.13 | 3.62 |
5063 | 5406 | 1.126846 | GCAGACAGTAACATGCGTGTC | 59.873 | 52.381 | 12.96 | 0.25 | 37.67 | 3.67 |
5067 | 5410 | 1.002366 | GGAGCAGACAGTAACATGCG | 58.998 | 55.000 | 0.00 | 0.00 | 43.41 | 4.73 |
5068 | 5411 | 1.373570 | GGGAGCAGACAGTAACATGC | 58.626 | 55.000 | 0.00 | 0.00 | 38.97 | 4.06 |
5069 | 5412 | 1.556911 | AGGGGAGCAGACAGTAACATG | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
5187 | 5851 | 6.307077 | GGTAGAACGGCATTTCATTTACAAAC | 59.693 | 38.462 | 0.00 | 0.00 | 0.00 | 2.93 |
5226 | 5892 | 0.534203 | GCCAGGGAACACGAACTCAA | 60.534 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5233 | 5899 | 2.876368 | GATGAGGGCCAGGGAACACG | 62.876 | 65.000 | 6.18 | 0.00 | 0.00 | 4.49 |
5234 | 5900 | 1.077429 | GATGAGGGCCAGGGAACAC | 60.077 | 63.158 | 6.18 | 0.00 | 0.00 | 3.32 |
5259 | 5925 | 1.946768 | TGCACAACAAGAACACTAGCC | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 3.93 |
5260 | 5926 | 3.904136 | ATGCACAACAAGAACACTAGC | 57.096 | 42.857 | 0.00 | 0.00 | 0.00 | 3.42 |
5261 | 5927 | 5.581605 | ACAAATGCACAACAAGAACACTAG | 58.418 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
5262 | 5928 | 5.574891 | ACAAATGCACAACAAGAACACTA | 57.425 | 34.783 | 0.00 | 0.00 | 0.00 | 2.74 |
5263 | 5929 | 4.454728 | ACAAATGCACAACAAGAACACT | 57.545 | 36.364 | 0.00 | 0.00 | 0.00 | 3.55 |
5264 | 5930 | 4.884707 | CAACAAATGCACAACAAGAACAC | 58.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
5278 | 5947 | 5.179045 | AGACTCTTCAACAGCAACAAATG | 57.821 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
5279 | 5948 | 5.357878 | TCAAGACTCTTCAACAGCAACAAAT | 59.642 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
5285 | 5954 | 4.313282 | CAGATCAAGACTCTTCAACAGCA | 58.687 | 43.478 | 0.00 | 0.00 | 0.00 | 4.41 |
5353 | 6023 | 3.515602 | AGAAGTGGGCTGAGAAAACAT | 57.484 | 42.857 | 0.00 | 0.00 | 0.00 | 2.71 |
5354 | 6024 | 3.117888 | AGAAGAAGTGGGCTGAGAAAACA | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
5356 | 6026 | 3.864789 | AGAAGAAGTGGGCTGAGAAAA | 57.135 | 42.857 | 0.00 | 0.00 | 0.00 | 2.29 |
5367 | 6037 | 3.064931 | GGGTTGTACCGAAGAAGAAGTG | 58.935 | 50.000 | 0.00 | 0.00 | 39.83 | 3.16 |
5368 | 6038 | 2.038164 | GGGGTTGTACCGAAGAAGAAGT | 59.962 | 50.000 | 0.00 | 0.00 | 39.83 | 3.01 |
5369 | 6039 | 2.614734 | GGGGGTTGTACCGAAGAAGAAG | 60.615 | 54.545 | 0.00 | 0.00 | 39.83 | 2.85 |
5370 | 6040 | 1.348696 | GGGGGTTGTACCGAAGAAGAA | 59.651 | 52.381 | 0.00 | 0.00 | 39.83 | 2.52 |
5371 | 6041 | 0.978907 | GGGGGTTGTACCGAAGAAGA | 59.021 | 55.000 | 0.00 | 0.00 | 39.83 | 2.87 |
5372 | 6042 | 0.981943 | AGGGGGTTGTACCGAAGAAG | 59.018 | 55.000 | 0.00 | 0.00 | 39.83 | 2.85 |
5373 | 6043 | 0.688487 | CAGGGGGTTGTACCGAAGAA | 59.312 | 55.000 | 0.00 | 0.00 | 39.83 | 2.52 |
5374 | 6044 | 0.178926 | TCAGGGGGTTGTACCGAAGA | 60.179 | 55.000 | 0.00 | 0.00 | 39.83 | 2.87 |
5375 | 6045 | 0.688487 | TTCAGGGGGTTGTACCGAAG | 59.312 | 55.000 | 0.00 | 0.00 | 39.83 | 3.79 |
5376 | 6046 | 1.138568 | TTTCAGGGGGTTGTACCGAA | 58.861 | 50.000 | 0.00 | 0.00 | 39.83 | 4.30 |
5377 | 6047 | 1.138568 | TTTTCAGGGGGTTGTACCGA | 58.861 | 50.000 | 0.00 | 0.00 | 39.83 | 4.69 |
5378 | 6048 | 1.241165 | GTTTTCAGGGGGTTGTACCG | 58.759 | 55.000 | 0.00 | 0.00 | 39.83 | 4.02 |
5379 | 6049 | 2.368311 | TGTTTTCAGGGGGTTGTACC | 57.632 | 50.000 | 0.00 | 0.00 | 37.60 | 3.34 |
5380 | 6050 | 3.492337 | TGATGTTTTCAGGGGGTTGTAC | 58.508 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
5381 | 6051 | 3.885976 | TGATGTTTTCAGGGGGTTGTA | 57.114 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
5382 | 6052 | 2.698274 | GTTGATGTTTTCAGGGGGTTGT | 59.302 | 45.455 | 0.00 | 0.00 | 35.27 | 3.32 |
5383 | 6053 | 2.288152 | CGTTGATGTTTTCAGGGGGTTG | 60.288 | 50.000 | 0.00 | 0.00 | 35.27 | 3.77 |
5384 | 6054 | 1.960689 | CGTTGATGTTTTCAGGGGGTT | 59.039 | 47.619 | 0.00 | 0.00 | 35.27 | 4.11 |
5385 | 6055 | 1.616159 | CGTTGATGTTTTCAGGGGGT | 58.384 | 50.000 | 0.00 | 0.00 | 35.27 | 4.95 |
5386 | 6056 | 0.887933 | CCGTTGATGTTTTCAGGGGG | 59.112 | 55.000 | 0.00 | 0.00 | 35.27 | 5.40 |
5387 | 6057 | 1.539827 | GACCGTTGATGTTTTCAGGGG | 59.460 | 52.381 | 0.00 | 0.00 | 35.27 | 4.79 |
5388 | 6058 | 1.539827 | GGACCGTTGATGTTTTCAGGG | 59.460 | 52.381 | 0.00 | 0.00 | 35.27 | 4.45 |
5389 | 6059 | 2.226330 | TGGACCGTTGATGTTTTCAGG | 58.774 | 47.619 | 0.00 | 0.00 | 35.27 | 3.86 |
5390 | 6060 | 3.138304 | TCTGGACCGTTGATGTTTTCAG | 58.862 | 45.455 | 0.00 | 0.00 | 35.27 | 3.02 |
5391 | 6061 | 3.201353 | TCTGGACCGTTGATGTTTTCA | 57.799 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
5392 | 6062 | 3.181520 | CGATCTGGACCGTTGATGTTTTC | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 2.29 |
5393 | 6063 | 2.742053 | CGATCTGGACCGTTGATGTTTT | 59.258 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
5394 | 6064 | 2.289444 | ACGATCTGGACCGTTGATGTTT | 60.289 | 45.455 | 0.00 | 0.00 | 35.21 | 2.83 |
5395 | 6065 | 1.275291 | ACGATCTGGACCGTTGATGTT | 59.725 | 47.619 | 0.00 | 0.00 | 35.21 | 2.71 |
5396 | 6066 | 0.895530 | ACGATCTGGACCGTTGATGT | 59.104 | 50.000 | 0.00 | 0.00 | 35.21 | 3.06 |
5397 | 6067 | 1.560923 | GACGATCTGGACCGTTGATG | 58.439 | 55.000 | 0.00 | 0.00 | 39.30 | 3.07 |
5398 | 6068 | 0.460311 | GGACGATCTGGACCGTTGAT | 59.540 | 55.000 | 0.00 | 0.00 | 39.30 | 2.57 |
5399 | 6069 | 0.611062 | AGGACGATCTGGACCGTTGA | 60.611 | 55.000 | 0.00 | 0.00 | 39.30 | 3.18 |
5400 | 6070 | 1.100510 | TAGGACGATCTGGACCGTTG | 58.899 | 55.000 | 0.00 | 0.00 | 39.30 | 4.10 |
5401 | 6071 | 2.068834 | ATAGGACGATCTGGACCGTT | 57.931 | 50.000 | 0.00 | 0.00 | 39.30 | 4.44 |
5402 | 6072 | 2.502295 | GTATAGGACGATCTGGACCGT | 58.498 | 52.381 | 0.00 | 0.00 | 42.17 | 4.83 |
5403 | 6073 | 1.811359 | GGTATAGGACGATCTGGACCG | 59.189 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
5404 | 6074 | 2.169330 | GGGTATAGGACGATCTGGACC | 58.831 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
5405 | 6075 | 2.169330 | GGGGTATAGGACGATCTGGAC | 58.831 | 57.143 | 0.00 | 0.00 | 0.00 | 4.02 |
5406 | 6076 | 2.071372 | AGGGGTATAGGACGATCTGGA | 58.929 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
5407 | 6077 | 2.606751 | AGGGGTATAGGACGATCTGG | 57.393 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5408 | 6078 | 2.488545 | CGAAGGGGTATAGGACGATCTG | 59.511 | 54.545 | 0.00 | 0.00 | 0.00 | 2.90 |
5409 | 6079 | 2.792878 | CGAAGGGGTATAGGACGATCT | 58.207 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
5410 | 6080 | 1.201880 | GCGAAGGGGTATAGGACGATC | 59.798 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
5411 | 6081 | 1.254954 | GCGAAGGGGTATAGGACGAT | 58.745 | 55.000 | 0.00 | 0.00 | 0.00 | 3.73 |
5412 | 6082 | 0.825010 | GGCGAAGGGGTATAGGACGA | 60.825 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5413 | 6083 | 0.826672 | AGGCGAAGGGGTATAGGACG | 60.827 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5414 | 6084 | 0.680061 | CAGGCGAAGGGGTATAGGAC | 59.320 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5415 | 6085 | 0.559205 | TCAGGCGAAGGGGTATAGGA | 59.441 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
5416 | 6086 | 1.420430 | TTCAGGCGAAGGGGTATAGG | 58.580 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5417 | 6087 | 3.118371 | AGTTTTCAGGCGAAGGGGTATAG | 60.118 | 47.826 | 0.00 | 0.00 | 31.28 | 1.31 |
5418 | 6088 | 2.841881 | AGTTTTCAGGCGAAGGGGTATA | 59.158 | 45.455 | 0.00 | 0.00 | 31.28 | 1.47 |
5419 | 6089 | 1.633945 | AGTTTTCAGGCGAAGGGGTAT | 59.366 | 47.619 | 0.00 | 0.00 | 31.28 | 2.73 |
5420 | 6090 | 1.061546 | AGTTTTCAGGCGAAGGGGTA | 58.938 | 50.000 | 0.00 | 0.00 | 31.28 | 3.69 |
5421 | 6091 | 0.185175 | AAGTTTTCAGGCGAAGGGGT | 59.815 | 50.000 | 0.00 | 0.00 | 31.28 | 4.95 |
5422 | 6092 | 2.194201 | TAAGTTTTCAGGCGAAGGGG | 57.806 | 50.000 | 0.00 | 0.00 | 31.28 | 4.79 |
5423 | 6093 | 4.577834 | TTTTAAGTTTTCAGGCGAAGGG | 57.422 | 40.909 | 0.00 | 0.00 | 31.28 | 3.95 |
5442 | 6112 | 3.769300 | GCAATGACCATCCTACCCTTTTT | 59.231 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
5443 | 6113 | 3.365472 | GCAATGACCATCCTACCCTTTT | 58.635 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
5444 | 6114 | 2.358195 | GGCAATGACCATCCTACCCTTT | 60.358 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
5445 | 6115 | 1.215423 | GGCAATGACCATCCTACCCTT | 59.785 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
5446 | 6116 | 0.846693 | GGCAATGACCATCCTACCCT | 59.153 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
5447 | 6117 | 0.178990 | GGGCAATGACCATCCTACCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
5448 | 6118 | 0.178990 | GGGGCAATGACCATCCTACC | 60.179 | 60.000 | 7.73 | 0.00 | 27.52 | 3.18 |
5449 | 6119 | 0.846693 | AGGGGCAATGACCATCCTAC | 59.153 | 55.000 | 7.73 | 0.00 | 27.52 | 3.18 |
5450 | 6120 | 0.846015 | CAGGGGCAATGACCATCCTA | 59.154 | 55.000 | 7.73 | 0.00 | 27.52 | 2.94 |
5451 | 6121 | 1.616921 | CAGGGGCAATGACCATCCT | 59.383 | 57.895 | 7.73 | 0.00 | 27.52 | 3.24 |
5452 | 6122 | 2.129785 | GCAGGGGCAATGACCATCC | 61.130 | 63.158 | 7.73 | 0.00 | 40.72 | 3.51 |
5453 | 6123 | 2.129785 | GGCAGGGGCAATGACCATC | 61.130 | 63.158 | 7.73 | 0.00 | 43.71 | 3.51 |
5454 | 6124 | 2.042639 | GGCAGGGGCAATGACCAT | 60.043 | 61.111 | 7.73 | 0.00 | 43.71 | 3.55 |
5455 | 6125 | 4.380945 | GGGCAGGGGCAATGACCA | 62.381 | 66.667 | 7.73 | 0.00 | 45.98 | 4.02 |
5457 | 6127 | 4.066139 | AGGGGCAGGGGCAATGAC | 62.066 | 66.667 | 0.00 | 0.00 | 43.71 | 3.06 |
5458 | 6128 | 3.743017 | GAGGGGCAGGGGCAATGA | 61.743 | 66.667 | 0.00 | 0.00 | 43.71 | 2.57 |
5459 | 6129 | 4.847367 | GGAGGGGCAGGGGCAATG | 62.847 | 72.222 | 0.00 | 0.00 | 43.71 | 2.82 |
5505 | 6175 | 3.453491 | TACATACGTCGACGGGCGC | 62.453 | 63.158 | 37.89 | 0.00 | 44.95 | 6.53 |
5506 | 6176 | 1.652329 | GTACATACGTCGACGGGCG | 60.652 | 63.158 | 37.89 | 26.98 | 44.95 | 6.13 |
5507 | 6177 | 1.652329 | CGTACATACGTCGACGGGC | 60.652 | 63.158 | 37.89 | 20.27 | 44.13 | 6.13 |
5508 | 6178 | 4.576843 | CGTACATACGTCGACGGG | 57.423 | 61.111 | 37.89 | 28.27 | 44.13 | 5.28 |
5537 | 6207 | 3.391965 | ACGTATGTCGCCACAGTAAAAA | 58.608 | 40.909 | 0.00 | 0.00 | 44.19 | 1.94 |
5538 | 6208 | 3.029320 | ACGTATGTCGCCACAGTAAAA | 57.971 | 42.857 | 0.00 | 0.00 | 44.19 | 1.52 |
5539 | 6209 | 2.728690 | ACGTATGTCGCCACAGTAAA | 57.271 | 45.000 | 0.00 | 0.00 | 44.19 | 2.01 |
5540 | 6210 | 2.229543 | AGAACGTATGTCGCCACAGTAA | 59.770 | 45.455 | 0.00 | 0.00 | 44.19 | 2.24 |
5541 | 6211 | 1.814394 | AGAACGTATGTCGCCACAGTA | 59.186 | 47.619 | 0.00 | 0.00 | 44.19 | 2.74 |
5542 | 6212 | 0.601558 | AGAACGTATGTCGCCACAGT | 59.398 | 50.000 | 0.00 | 0.00 | 44.19 | 3.55 |
5543 | 6213 | 1.710013 | AAGAACGTATGTCGCCACAG | 58.290 | 50.000 | 0.00 | 0.00 | 44.19 | 3.66 |
5544 | 6214 | 2.157834 | AAAGAACGTATGTCGCCACA | 57.842 | 45.000 | 0.00 | 0.00 | 44.19 | 4.17 |
5545 | 6215 | 3.531262 | AAAAAGAACGTATGTCGCCAC | 57.469 | 42.857 | 0.00 | 0.00 | 44.19 | 5.01 |
5546 | 6216 | 3.432933 | GGTAAAAAGAACGTATGTCGCCA | 59.567 | 43.478 | 0.00 | 0.00 | 44.19 | 5.69 |
5547 | 6217 | 3.482436 | CGGTAAAAAGAACGTATGTCGCC | 60.482 | 47.826 | 0.00 | 0.00 | 44.19 | 5.54 |
5548 | 6218 | 3.652478 | CGGTAAAAAGAACGTATGTCGC | 58.348 | 45.455 | 0.00 | 0.00 | 44.19 | 5.19 |
5549 | 6219 | 3.652478 | GCGGTAAAAAGAACGTATGTCG | 58.348 | 45.455 | 0.00 | 0.00 | 46.00 | 4.35 |
5550 | 6220 | 3.121778 | ACGCGGTAAAAAGAACGTATGTC | 59.878 | 43.478 | 12.47 | 0.00 | 31.03 | 3.06 |
5551 | 6221 | 3.059166 | ACGCGGTAAAAAGAACGTATGT | 58.941 | 40.909 | 12.47 | 0.00 | 31.03 | 2.29 |
5552 | 6222 | 3.710437 | ACGCGGTAAAAAGAACGTATG | 57.290 | 42.857 | 12.47 | 0.00 | 31.03 | 2.39 |
5553 | 6223 | 3.859386 | CCTACGCGGTAAAAAGAACGTAT | 59.141 | 43.478 | 12.47 | 0.00 | 35.70 | 3.06 |
5554 | 6224 | 3.241701 | CCTACGCGGTAAAAAGAACGTA | 58.758 | 45.455 | 12.47 | 0.00 | 35.15 | 3.57 |
5555 | 6225 | 2.061028 | CCTACGCGGTAAAAAGAACGT | 58.939 | 47.619 | 12.47 | 0.00 | 37.53 | 3.99 |
5556 | 6226 | 2.061028 | ACCTACGCGGTAAAAAGAACG | 58.939 | 47.619 | 12.47 | 0.00 | 46.73 | 3.95 |
5557 | 6227 | 2.158254 | CCACCTACGCGGTAAAAAGAAC | 59.842 | 50.000 | 12.47 | 0.00 | 46.94 | 3.01 |
5558 | 6228 | 2.224257 | ACCACCTACGCGGTAAAAAGAA | 60.224 | 45.455 | 12.47 | 0.00 | 46.94 | 2.52 |
5559 | 6229 | 1.344114 | ACCACCTACGCGGTAAAAAGA | 59.656 | 47.619 | 12.47 | 0.00 | 46.94 | 2.52 |
5560 | 6230 | 1.728425 | GACCACCTACGCGGTAAAAAG | 59.272 | 52.381 | 12.47 | 0.00 | 46.94 | 2.27 |
5561 | 6231 | 1.069823 | TGACCACCTACGCGGTAAAAA | 59.930 | 47.619 | 12.47 | 0.00 | 46.94 | 1.94 |
5562 | 6232 | 0.678395 | TGACCACCTACGCGGTAAAA | 59.322 | 50.000 | 12.47 | 0.00 | 46.94 | 1.52 |
5563 | 6233 | 0.678395 | TTGACCACCTACGCGGTAAA | 59.322 | 50.000 | 12.47 | 0.00 | 46.94 | 2.01 |
5564 | 6234 | 0.244450 | CTTGACCACCTACGCGGTAA | 59.756 | 55.000 | 12.47 | 0.00 | 46.94 | 2.85 |
5565 | 6235 | 1.885157 | CTTGACCACCTACGCGGTA | 59.115 | 57.895 | 12.47 | 0.00 | 46.94 | 4.02 |
5567 | 6237 | 2.813908 | GCTTGACCACCTACGCGG | 60.814 | 66.667 | 12.47 | 0.00 | 39.35 | 6.46 |
5568 | 6238 | 2.048597 | TGCTTGACCACCTACGCG | 60.049 | 61.111 | 3.53 | 3.53 | 0.00 | 6.01 |
5569 | 6239 | 2.380410 | CGTGCTTGACCACCTACGC | 61.380 | 63.158 | 0.00 | 0.00 | 32.10 | 4.42 |
5570 | 6240 | 1.006571 | ACGTGCTTGACCACCTACG | 60.007 | 57.895 | 0.00 | 0.00 | 37.54 | 3.51 |
5571 | 6241 | 1.007336 | CGACGTGCTTGACCACCTAC | 61.007 | 60.000 | 0.00 | 0.00 | 32.10 | 3.18 |
5572 | 6242 | 1.287815 | CGACGTGCTTGACCACCTA | 59.712 | 57.895 | 0.00 | 0.00 | 32.10 | 3.08 |
5573 | 6243 | 2.029073 | CGACGTGCTTGACCACCT | 59.971 | 61.111 | 0.00 | 0.00 | 32.10 | 4.00 |
5574 | 6244 | 3.041940 | CCGACGTGCTTGACCACC | 61.042 | 66.667 | 0.00 | 0.00 | 32.10 | 4.61 |
5575 | 6245 | 2.279918 | ACCGACGTGCTTGACCAC | 60.280 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
5576 | 6246 | 2.279851 | CACCGACGTGCTTGACCA | 60.280 | 61.111 | 0.00 | 0.00 | 32.04 | 4.02 |
5577 | 6247 | 3.041940 | CCACCGACGTGCTTGACC | 61.042 | 66.667 | 0.00 | 0.00 | 38.79 | 4.02 |
5578 | 6248 | 2.279918 | ACCACCGACGTGCTTGAC | 60.280 | 61.111 | 0.00 | 0.00 | 38.79 | 3.18 |
5579 | 6249 | 2.028484 | GACCACCGACGTGCTTGA | 59.972 | 61.111 | 0.00 | 0.00 | 38.79 | 3.02 |
5580 | 6250 | 1.433053 | TTTGACCACCGACGTGCTTG | 61.433 | 55.000 | 0.00 | 0.00 | 38.79 | 4.01 |
5581 | 6251 | 1.153329 | TTTGACCACCGACGTGCTT | 60.153 | 52.632 | 0.00 | 0.00 | 38.79 | 3.91 |
5582 | 6252 | 1.885850 | GTTTGACCACCGACGTGCT | 60.886 | 57.895 | 0.00 | 0.00 | 38.79 | 4.40 |
5583 | 6253 | 2.629763 | GTTTGACCACCGACGTGC | 59.370 | 61.111 | 0.00 | 0.00 | 38.79 | 5.34 |
5584 | 6254 | 3.326109 | GGTTTGACCACCGACGTG | 58.674 | 61.111 | 0.00 | 0.00 | 38.42 | 4.49 |
5591 | 6261 | 4.364409 | GACGCGCGGTTTGACCAC | 62.364 | 66.667 | 35.22 | 9.31 | 38.47 | 4.16 |
5612 | 6282 | 4.409588 | CACGACGCGCTTTCACCG | 62.410 | 66.667 | 5.73 | 0.00 | 0.00 | 4.94 |
5613 | 6283 | 4.072088 | CCACGACGCGCTTTCACC | 62.072 | 66.667 | 5.73 | 0.00 | 0.00 | 4.02 |
5614 | 6284 | 4.719616 | GCCACGACGCGCTTTCAC | 62.720 | 66.667 | 5.73 | 0.00 | 0.00 | 3.18 |
5660 | 6330 | 3.812019 | CAGACGAGGGGACGGACG | 61.812 | 72.222 | 0.00 | 0.00 | 37.61 | 4.79 |
5661 | 6331 | 4.131088 | GCAGACGAGGGGACGGAC | 62.131 | 72.222 | 0.00 | 0.00 | 37.61 | 4.79 |
5722 | 6392 | 2.128035 | CCTATCAATTCGACGGCAGTC | 58.872 | 52.381 | 6.95 | 6.95 | 43.72 | 3.51 |
5723 | 6393 | 1.806623 | GCCTATCAATTCGACGGCAGT | 60.807 | 52.381 | 0.00 | 0.00 | 41.21 | 4.40 |
5724 | 6394 | 0.861837 | GCCTATCAATTCGACGGCAG | 59.138 | 55.000 | 0.00 | 0.00 | 41.21 | 4.85 |
5725 | 6395 | 0.531974 | GGCCTATCAATTCGACGGCA | 60.532 | 55.000 | 0.00 | 0.00 | 42.60 | 5.69 |
5726 | 6396 | 0.531974 | TGGCCTATCAATTCGACGGC | 60.532 | 55.000 | 3.32 | 0.00 | 40.96 | 5.68 |
5727 | 6397 | 1.597663 | GTTGGCCTATCAATTCGACGG | 59.402 | 52.381 | 3.32 | 0.00 | 0.00 | 4.79 |
5728 | 6398 | 1.257936 | CGTTGGCCTATCAATTCGACG | 59.742 | 52.381 | 3.32 | 0.00 | 0.00 | 5.12 |
5729 | 6399 | 2.284417 | GTCGTTGGCCTATCAATTCGAC | 59.716 | 50.000 | 3.32 | 7.16 | 38.22 | 4.20 |
5730 | 6400 | 2.546778 | GTCGTTGGCCTATCAATTCGA | 58.453 | 47.619 | 3.32 | 0.00 | 0.00 | 3.71 |
5731 | 6401 | 1.597663 | GGTCGTTGGCCTATCAATTCG | 59.402 | 52.381 | 3.32 | 0.00 | 0.00 | 3.34 |
5732 | 6402 | 1.947456 | GGGTCGTTGGCCTATCAATTC | 59.053 | 52.381 | 3.32 | 0.00 | 0.00 | 2.17 |
5733 | 6403 | 1.745827 | CGGGTCGTTGGCCTATCAATT | 60.746 | 52.381 | 3.32 | 0.00 | 0.00 | 2.32 |
5734 | 6404 | 0.179056 | CGGGTCGTTGGCCTATCAAT | 60.179 | 55.000 | 3.32 | 0.00 | 0.00 | 2.57 |
5735 | 6405 | 1.219664 | CGGGTCGTTGGCCTATCAA | 59.780 | 57.895 | 3.32 | 0.00 | 0.00 | 2.57 |
5736 | 6406 | 1.952102 | GACGGGTCGTTGGCCTATCA | 61.952 | 60.000 | 3.32 | 0.00 | 41.37 | 2.15 |
5737 | 6407 | 1.227176 | GACGGGTCGTTGGCCTATC | 60.227 | 63.158 | 3.32 | 0.00 | 41.37 | 2.08 |
5738 | 6408 | 2.728435 | GGACGGGTCGTTGGCCTAT | 61.728 | 63.158 | 3.32 | 0.00 | 41.37 | 2.57 |
5739 | 6409 | 3.384532 | GGACGGGTCGTTGGCCTA | 61.385 | 66.667 | 3.32 | 0.00 | 41.37 | 3.93 |
5765 | 6435 | 1.117142 | TTTATAGGGAGACGGCGGGG | 61.117 | 60.000 | 13.24 | 0.00 | 0.00 | 5.73 |
5766 | 6436 | 0.974383 | ATTTATAGGGAGACGGCGGG | 59.026 | 55.000 | 13.24 | 0.00 | 0.00 | 6.13 |
5767 | 6437 | 1.893801 | AGATTTATAGGGAGACGGCGG | 59.106 | 52.381 | 13.24 | 0.00 | 0.00 | 6.13 |
5768 | 6438 | 2.557056 | TGAGATTTATAGGGAGACGGCG | 59.443 | 50.000 | 4.80 | 4.80 | 0.00 | 6.46 |
5769 | 6439 | 3.306156 | GGTGAGATTTATAGGGAGACGGC | 60.306 | 52.174 | 0.00 | 0.00 | 0.00 | 5.68 |
5770 | 6440 | 3.258622 | GGGTGAGATTTATAGGGAGACGG | 59.741 | 52.174 | 0.00 | 0.00 | 0.00 | 4.79 |
5771 | 6441 | 3.258622 | GGGGTGAGATTTATAGGGAGACG | 59.741 | 52.174 | 0.00 | 0.00 | 0.00 | 4.18 |
5772 | 6442 | 3.583526 | GGGGGTGAGATTTATAGGGAGAC | 59.416 | 52.174 | 0.00 | 0.00 | 0.00 | 3.36 |
5773 | 6443 | 3.757461 | CGGGGGTGAGATTTATAGGGAGA | 60.757 | 52.174 | 0.00 | 0.00 | 0.00 | 3.71 |
5774 | 6444 | 2.567615 | CGGGGGTGAGATTTATAGGGAG | 59.432 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
5775 | 6445 | 2.090380 | ACGGGGGTGAGATTTATAGGGA | 60.090 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5776 | 6446 | 2.302157 | GACGGGGGTGAGATTTATAGGG | 59.698 | 54.545 | 0.00 | 0.00 | 0.00 | 3.53 |
5777 | 6447 | 2.302157 | GGACGGGGGTGAGATTTATAGG | 59.698 | 54.545 | 0.00 | 0.00 | 0.00 | 2.57 |
5778 | 6448 | 2.029290 | CGGACGGGGGTGAGATTTATAG | 60.029 | 54.545 | 0.00 | 0.00 | 0.00 | 1.31 |
5779 | 6449 | 1.965643 | CGGACGGGGGTGAGATTTATA | 59.034 | 52.381 | 0.00 | 0.00 | 0.00 | 0.98 |
5780 | 6450 | 0.756903 | CGGACGGGGGTGAGATTTAT | 59.243 | 55.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5781 | 6451 | 1.963464 | GCGGACGGGGGTGAGATTTA | 61.963 | 60.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5782 | 6452 | 2.987125 | CGGACGGGGGTGAGATTT | 59.013 | 61.111 | 0.00 | 0.00 | 0.00 | 2.17 |
5783 | 6453 | 3.782443 | GCGGACGGGGGTGAGATT | 61.782 | 66.667 | 0.00 | 0.00 | 0.00 | 2.40 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.