Multiple sequence alignment - TraesCS3B01G440600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G440600 chr3B 100.000 4227 0 0 1 4227 680255869 680251643 0.000000e+00 7806
1 TraesCS3B01G440600 chr3D 90.753 3385 189 63 106 3426 516998909 517002233 0.000000e+00 4403
2 TraesCS3B01G440600 chr3D 85.984 371 43 7 3446 3811 517002330 517002696 5.130000e-104 388
3 TraesCS3B01G440600 chr3D 88.148 135 11 5 1 132 516998770 516998902 5.660000e-34 156
4 TraesCS3B01G440600 chr3A 90.380 3420 180 52 114 3440 652820032 652823395 0.000000e+00 4355
5 TraesCS3B01G440600 chr3A 88.489 139 9 6 1 132 652819880 652820018 1.220000e-35 161
6 TraesCS3B01G440600 chr1D 81.918 365 58 6 2830 3190 361037046 361037406 6.870000e-78 302
7 TraesCS3B01G440600 chr1A 81.644 365 59 6 2830 3190 460641470 460641830 3.200000e-76 296
8 TraesCS3B01G440600 chr1B 81.319 364 62 3 2830 3190 483292451 483292811 1.490000e-74 291


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G440600 chr3B 680251643 680255869 4226 True 7806 7806 100.0000 1 4227 1 chr3B.!!$R1 4226
1 TraesCS3B01G440600 chr3D 516998770 517002696 3926 False 1649 4403 88.2950 1 3811 3 chr3D.!!$F1 3810
2 TraesCS3B01G440600 chr3A 652819880 652823395 3515 False 2258 4355 89.4345 1 3440 2 chr3A.!!$F1 3439

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
282 329 0.881796 GGAAGTTGCTAGTTGCCACC 59.118 55.000 0.00 0.00 42.00 4.61 F
355 408 1.065126 GGTGCTGATCCTAAGGCTGTT 60.065 52.381 0.00 0.00 0.00 3.16 F
1381 1461 0.179020 ACTTGCAGGCTGTAGCACAA 60.179 50.000 17.16 10.07 44.36 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1100 1172 1.138859 CTGACAAGGTGGTGTCTGTGA 59.861 52.381 6.85 0.00 46.70 3.58 R
2291 2406 0.520404 CACCAGATTGTGCAGACTGC 59.480 55.000 20.86 20.86 45.29 4.40 R
3236 3389 0.106369 CCCTGCCATGATCCACACAT 60.106 55.000 0.00 0.00 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 53 8.268850 TCTTATGCTTTAGATTGGTTGTTCTC 57.731 34.615 0.00 0.00 0.00 2.87
49 55 3.188460 TGCTTTAGATTGGTTGTTCTCGC 59.812 43.478 0.00 0.00 0.00 5.03
111 119 8.630917 CGGTTTATAGAAGTAGAAGATCCAAGA 58.369 37.037 0.00 0.00 0.00 3.02
112 120 9.974980 GGTTTATAGAAGTAGAAGATCCAAGAG 57.025 37.037 0.00 0.00 0.00 2.85
126 134 2.603652 AAGAGGAAGGGGCCGGAAC 61.604 63.158 5.05 0.00 0.00 3.62
155 192 2.482864 CTTGCTTGCCGTTTCCATTTT 58.517 42.857 0.00 0.00 0.00 1.82
166 204 5.049060 GCCGTTTCCATTTTATTTTGGCTTT 60.049 36.000 0.00 0.00 35.92 3.51
171 209 5.619220 TCCATTTTATTTTGGCTTTGTGCT 58.381 33.333 0.00 0.00 42.39 4.40
192 238 4.641645 CACGGCTGCAGACCCCAA 62.642 66.667 20.43 0.00 0.00 4.12
193 239 3.884774 ACGGCTGCAGACCCCAAA 61.885 61.111 20.43 0.00 0.00 3.28
194 240 3.058160 CGGCTGCAGACCCCAAAG 61.058 66.667 20.43 0.00 0.00 2.77
195 241 3.376918 GGCTGCAGACCCCAAAGC 61.377 66.667 20.43 0.00 0.00 3.51
196 242 2.282745 GCTGCAGACCCCAAAGCT 60.283 61.111 20.43 0.00 0.00 3.74
197 243 2.338785 GCTGCAGACCCCAAAGCTC 61.339 63.158 20.43 0.00 0.00 4.09
212 258 4.140536 CAAAGCTCCTTTTGAGAAGGTCT 58.859 43.478 1.38 0.00 44.42 3.85
218 264 2.031682 CCTTTTGAGAAGGTCTGCGTTG 60.032 50.000 0.00 0.00 32.78 4.10
280 327 2.356665 TTGGAAGTTGCTAGTTGCCA 57.643 45.000 4.92 4.35 42.00 4.92
281 328 1.604604 TGGAAGTTGCTAGTTGCCAC 58.395 50.000 4.92 0.00 42.00 5.01
282 329 0.881796 GGAAGTTGCTAGTTGCCACC 59.118 55.000 0.00 0.00 42.00 4.61
283 330 0.881796 GAAGTTGCTAGTTGCCACCC 59.118 55.000 0.00 0.00 42.00 4.61
338 391 6.118170 AGATTGGATTGTTGATACAGAGGTG 58.882 40.000 0.00 0.00 35.28 4.00
352 405 1.127343 GAGGTGCTGATCCTAAGGCT 58.873 55.000 0.00 0.00 35.20 4.58
355 408 1.065126 GGTGCTGATCCTAAGGCTGTT 60.065 52.381 0.00 0.00 0.00 3.16
497 559 5.694816 TGCGTGACATTTTGTATTACAAGG 58.305 37.500 9.10 6.43 39.53 3.61
507 569 3.857052 TGTATTACAAGGAACTCTGCCG 58.143 45.455 0.00 0.00 38.49 5.69
508 570 3.259876 TGTATTACAAGGAACTCTGCCGT 59.740 43.478 0.00 0.00 38.49 5.68
542 605 4.156922 TCCATGGTTAACAACGGCTTATTG 59.843 41.667 12.58 0.00 0.00 1.90
585 648 4.633980 GCACAGGGCAAGAAAACG 57.366 55.556 0.00 0.00 43.97 3.60
653 718 5.054390 ACGAAACAAAGCAAAGAGACAAA 57.946 34.783 0.00 0.00 0.00 2.83
655 720 4.500477 CGAAACAAAGCAAAGAGACAAAGG 59.500 41.667 0.00 0.00 0.00 3.11
656 721 4.391405 AACAAAGCAAAGAGACAAAGGG 57.609 40.909 0.00 0.00 0.00 3.95
657 722 3.365472 ACAAAGCAAAGAGACAAAGGGT 58.635 40.909 0.00 0.00 0.00 4.34
671 736 2.936498 CAAAGGGTGGCACTACTTATCG 59.064 50.000 21.89 13.24 0.00 2.92
739 804 6.195600 TCTGTTTGTGTTCCCTACCTAATT 57.804 37.500 0.00 0.00 0.00 1.40
758 823 7.013942 ACCTAATTTTGCGGGTATTTATCTTCC 59.986 37.037 0.00 0.00 0.00 3.46
814 879 6.697641 AGTAAGAACCCTACCTTGATCAAA 57.302 37.500 9.88 0.00 0.00 2.69
892 957 1.368374 TTCCTGGGAGGTTACTTGGG 58.632 55.000 0.00 0.00 36.53 4.12
990 1062 4.014569 TGCACTACTGAATGCAGGTTTA 57.985 40.909 5.47 0.00 46.63 2.01
1054 1126 3.155998 GACAATTCGTTCAATGCACTCG 58.844 45.455 0.00 0.00 0.00 4.18
1080 1152 3.626924 GGTGGCGGTGAGAGTGGT 61.627 66.667 0.00 0.00 0.00 4.16
1081 1153 2.357517 GTGGCGGTGAGAGTGGTG 60.358 66.667 0.00 0.00 0.00 4.17
1082 1154 3.625897 TGGCGGTGAGAGTGGTGG 61.626 66.667 0.00 0.00 0.00 4.61
1245 1317 0.692419 CACTAGGATGGGGAGCCACT 60.692 60.000 0.00 0.00 0.00 4.00
1277 1349 2.489722 TCTCGTGGTGAGTGATCTTCAG 59.510 50.000 0.00 0.00 45.46 3.02
1290 1362 6.002704 AGTGATCTTCAGTTCTGCATTTCTT 58.997 36.000 0.00 0.00 0.00 2.52
1293 1365 6.713903 TGATCTTCAGTTCTGCATTTCTTTCT 59.286 34.615 0.00 0.00 0.00 2.52
1302 1374 8.800332 AGTTCTGCATTTCTTTCTTATGTGAAT 58.200 29.630 0.00 0.00 0.00 2.57
1381 1461 0.179020 ACTTGCAGGCTGTAGCACAA 60.179 50.000 17.16 10.07 44.36 3.33
1386 1466 1.464997 GCAGGCTGTAGCACAACTTAC 59.535 52.381 17.16 0.00 44.36 2.34
1394 1474 0.537371 AGCACAACTTACCACTGGGC 60.537 55.000 0.00 0.00 39.88 5.36
1414 1494 7.094205 ACTGGGCTTGTAGTTTAGATCATTTTG 60.094 37.037 0.00 0.00 0.00 2.44
1469 1552 4.441356 GGAAGTCCACTGCAAATGTGAAAA 60.441 41.667 6.16 0.00 37.60 2.29
1470 1553 4.734398 AGTCCACTGCAAATGTGAAAAA 57.266 36.364 6.16 0.00 37.60 1.94
1507 1590 2.727123 TGGTTCTTCAGCTGTCCAAA 57.273 45.000 14.67 0.00 0.00 3.28
1630 1731 1.338674 TGTTCAGGGCCTTATGTGACG 60.339 52.381 1.32 0.00 0.00 4.35
1672 1787 2.880268 TGTTTGAAGTGCAGTCCAGATG 59.120 45.455 0.00 0.00 0.00 2.90
1673 1788 3.141398 GTTTGAAGTGCAGTCCAGATGA 58.859 45.455 0.00 0.00 0.00 2.92
1674 1789 3.490439 TTGAAGTGCAGTCCAGATGAA 57.510 42.857 0.00 0.00 0.00 2.57
1675 1790 3.490439 TGAAGTGCAGTCCAGATGAAA 57.510 42.857 0.00 0.00 0.00 2.69
1676 1791 3.405831 TGAAGTGCAGTCCAGATGAAAG 58.594 45.455 0.00 0.00 0.00 2.62
1677 1792 2.486472 AGTGCAGTCCAGATGAAAGG 57.514 50.000 0.00 0.00 0.00 3.11
1678 1793 1.701847 AGTGCAGTCCAGATGAAAGGT 59.298 47.619 0.00 0.00 0.00 3.50
1679 1794 2.107204 AGTGCAGTCCAGATGAAAGGTT 59.893 45.455 0.00 0.00 0.00 3.50
1743 1858 6.765036 ACATGAATGAGTTGGTGATATCACTC 59.235 38.462 29.87 21.20 45.73 3.51
2016 2131 7.086376 GCAAGAACTTGAAATGCTTGAATCTA 58.914 34.615 17.19 0.00 42.93 1.98
2105 2220 7.072177 TGCGTGAACCTTTATTTAATCTCTG 57.928 36.000 0.00 0.00 0.00 3.35
2122 2237 1.630369 TCTGTTATCTTGGTGCAGGCT 59.370 47.619 0.00 0.00 0.00 4.58
2248 2363 2.939022 GTCGACTTGTGTGGCTGC 59.061 61.111 8.70 0.00 0.00 5.25
2282 2397 7.308782 ACAGGTAATTTGTTTGATCGATCTC 57.691 36.000 25.02 15.56 0.00 2.75
2287 2402 7.852945 GGTAATTTGTTTGATCGATCTCATGTC 59.147 37.037 25.02 10.65 0.00 3.06
2290 2405 3.452264 TGTTTGATCGATCTCATGTCCCT 59.548 43.478 25.02 0.00 0.00 4.20
2291 2406 3.740631 TTGATCGATCTCATGTCCCTG 57.259 47.619 25.02 0.00 0.00 4.45
2376 2492 4.727507 TTTTCTCTGCTCTGCTAGGTAG 57.272 45.455 0.00 0.00 0.00 3.18
2377 2493 3.374042 TTCTCTGCTCTGCTAGGTAGT 57.626 47.619 0.00 0.00 0.00 2.73
2385 2501 6.014499 TCTGCTCTGCTAGGTAGTTTTAACTT 60.014 38.462 0.00 0.00 40.37 2.66
2442 2569 0.392193 AGCACTGATCCTGGCTTTCG 60.392 55.000 0.00 0.00 31.34 3.46
2574 2721 9.464714 CTTATATGTCTTCTTACATAACGTGCT 57.535 33.333 0.00 0.00 43.59 4.40
2575 2722 7.932120 ATATGTCTTCTTACATAACGTGCTC 57.068 36.000 0.00 0.00 43.59 4.26
2598 2745 7.041098 GCTCTCTTCCTGATTTTGTTAAGTTGA 60.041 37.037 0.00 0.00 0.00 3.18
2698 2851 7.327518 CACCCAAGTTTATTTCGGTTGTTAATC 59.672 37.037 0.00 0.00 0.00 1.75
2707 2860 5.365403 TTCGGTTGTTAATCATGTTCACC 57.635 39.130 0.00 0.00 0.00 4.02
2708 2861 4.390264 TCGGTTGTTAATCATGTTCACCA 58.610 39.130 0.00 0.00 0.00 4.17
2709 2862 5.007034 TCGGTTGTTAATCATGTTCACCAT 58.993 37.500 0.00 0.00 0.00 3.55
2734 2887 2.031157 GGCATGTACGGCATTGTTATCC 60.031 50.000 10.93 0.00 35.19 2.59
2742 2895 4.016444 ACGGCATTGTTATCCAAGTTCAT 58.984 39.130 0.00 0.00 36.25 2.57
2761 2914 3.679502 TCATCATCGTTTACAGTGCTGTG 59.320 43.478 14.44 0.00 44.63 3.66
2779 2932 1.279840 GGTTGCTTGTCAGTCGCAC 59.720 57.895 0.00 0.00 32.71 5.34
2781 2934 1.520564 TTGCTTGTCAGTCGCACGT 60.521 52.632 0.00 0.00 32.71 4.49
2786 2939 0.240145 TTGTCAGTCGCACGTAGAGG 59.760 55.000 0.00 0.00 0.00 3.69
2794 2947 1.142748 GCACGTAGAGGCATGCTCT 59.857 57.895 18.92 19.07 35.16 4.09
2813 2966 4.321718 CTCTTTGCCTGAAATCTGACTCA 58.678 43.478 0.00 0.00 0.00 3.41
2815 2968 6.053632 TCTTTGCCTGAAATCTGACTCATA 57.946 37.500 0.00 0.00 0.00 2.15
2831 2984 5.422331 TGACTCATATCCGTTTCTCCTTCTT 59.578 40.000 0.00 0.00 0.00 2.52
2917 3070 1.292223 CCAGAACATCACCGACCGT 59.708 57.895 0.00 0.00 0.00 4.83
3149 3302 4.025858 GCTGCCTGAGCCTCACCA 62.026 66.667 0.00 0.00 42.54 4.17
3232 3385 0.252696 ACCATGCCTACTGAGGTCCA 60.253 55.000 0.00 0.00 45.78 4.02
3236 3389 0.042581 TGCCTACTGAGGTCCATCCA 59.957 55.000 0.00 0.00 45.78 3.41
3270 3424 3.221222 GGGTCTGAGATCCCGGTG 58.779 66.667 0.00 0.00 33.97 4.94
3271 3425 2.435693 GGGTCTGAGATCCCGGTGG 61.436 68.421 0.00 0.00 33.97 4.61
3272 3426 2.435693 GGTCTGAGATCCCGGTGGG 61.436 68.421 0.00 0.00 46.11 4.61
3298 3453 6.669977 GCTGAGTTTGTATCGTGTTGTATCAC 60.670 42.308 0.00 0.00 35.28 3.06
3303 3458 5.001237 TGTATCGTGTTGTATCACCGAAT 57.999 39.130 0.00 0.00 35.18 3.34
3319 3474 2.226330 CGAATGTGAAGTGGAACCCAA 58.774 47.619 0.00 0.00 37.80 4.12
3413 3580 1.373748 GCTTGTGCAATGTGCCTGG 60.374 57.895 0.00 0.00 44.23 4.45
3414 3581 2.043625 CTTGTGCAATGTGCCTGGT 58.956 52.632 0.00 0.00 44.23 4.00
3415 3582 0.038892 CTTGTGCAATGTGCCTGGTC 60.039 55.000 0.00 0.00 44.23 4.02
3416 3583 0.754587 TTGTGCAATGTGCCTGGTCA 60.755 50.000 0.00 0.00 44.23 4.02
3445 3619 2.764547 TGTGTGGGTGTGACGGGA 60.765 61.111 0.00 0.00 0.00 5.14
3453 3696 1.471119 GGTGTGACGGGACTGATCTA 58.529 55.000 0.00 0.00 0.00 1.98
3471 3714 7.550906 ACTGATCTAATTAGAAGAAAGCCACAC 59.449 37.037 18.79 1.44 35.69 3.82
3472 3715 6.535150 TGATCTAATTAGAAGAAAGCCACACG 59.465 38.462 18.79 0.00 35.69 4.49
3489 3732 5.352284 CCACACGATTTACTAAGCTGAGAT 58.648 41.667 4.63 0.00 0.00 2.75
3507 3750 6.212388 GCTGAGATAATTAGAGGGGATTGAGA 59.788 42.308 0.00 0.00 0.00 3.27
3511 3754 7.079048 AGATAATTAGAGGGGATTGAGACTGT 58.921 38.462 0.00 0.00 0.00 3.55
3517 3760 1.280421 GGGGATTGAGACTGTGAAGCT 59.720 52.381 0.00 0.00 0.00 3.74
3524 3767 4.341366 TGAGACTGTGAAGCTGAATCAA 57.659 40.909 0.00 0.00 0.00 2.57
3529 3772 2.975851 CTGTGAAGCTGAATCAAAACGC 59.024 45.455 0.00 0.00 0.00 4.84
3530 3773 2.287547 TGTGAAGCTGAATCAAAACGCC 60.288 45.455 0.00 0.00 0.00 5.68
3578 3821 0.535335 CCGATTCTTCTTCCCGGACA 59.465 55.000 0.73 0.00 42.49 4.02
3580 3823 2.000447 CGATTCTTCTTCCCGGACAAC 59.000 52.381 0.73 0.00 0.00 3.32
3581 3824 2.353803 CGATTCTTCTTCCCGGACAACT 60.354 50.000 0.73 0.00 0.00 3.16
3591 3834 2.821969 TCCCGGACAACTCTTACTACAC 59.178 50.000 0.73 0.00 0.00 2.90
3598 3841 6.405508 CGGACAACTCTTACTACACCACATAT 60.406 42.308 0.00 0.00 0.00 1.78
3604 3847 7.946207 ACTCTTACTACACCACATATCTCATG 58.054 38.462 0.00 0.00 0.00 3.07
3618 3861 7.594386 CACATATCTCATGTTACTGCTCACTAG 59.406 40.741 0.00 0.00 0.00 2.57
3665 3908 6.716934 TTAACCAGCAAATCAACCTGTTTA 57.283 33.333 0.00 0.00 0.00 2.01
3668 3911 6.909550 ACCAGCAAATCAACCTGTTTAATA 57.090 33.333 0.00 0.00 0.00 0.98
3671 3914 7.232534 ACCAGCAAATCAACCTGTTTAATAAGA 59.767 33.333 0.00 0.00 0.00 2.10
3695 3942 5.710513 TTTGTGTTTGATCAGATCTTGGG 57.289 39.130 11.83 0.00 0.00 4.12
3696 3943 4.371624 TGTGTTTGATCAGATCTTGGGT 57.628 40.909 11.83 0.00 0.00 4.51
3703 3950 5.440207 TGATCAGATCTTGGGTTCATTGA 57.560 39.130 11.83 0.00 0.00 2.57
3714 3961 8.055279 TCTTGGGTTCATTGATGAGAAATTAC 57.945 34.615 0.00 0.00 38.19 1.89
3719 3966 8.306761 GGGTTCATTGATGAGAAATTACTGTTT 58.693 33.333 0.00 0.00 38.19 2.83
3720 3967 9.132521 GGTTCATTGATGAGAAATTACTGTTTG 57.867 33.333 0.00 0.00 38.19 2.93
3730 3977 9.308000 TGAGAAATTACTGTTTGAATATTGGGT 57.692 29.630 0.00 0.00 0.00 4.51
3731 3978 9.573133 GAGAAATTACTGTTTGAATATTGGGTG 57.427 33.333 0.00 0.00 0.00 4.61
3732 3979 9.308000 AGAAATTACTGTTTGAATATTGGGTGA 57.692 29.630 0.00 0.00 0.00 4.02
3741 3988 5.450818 TGAATATTGGGTGAGCTTTAGGT 57.549 39.130 0.00 0.00 0.00 3.08
3746 3993 1.073284 TGGGTGAGCTTTAGGTCCAAC 59.927 52.381 6.50 0.00 41.53 3.77
3748 3995 1.073284 GGTGAGCTTTAGGTCCAACCA 59.927 52.381 11.46 0.00 41.95 3.67
3749 3996 2.290960 GGTGAGCTTTAGGTCCAACCAT 60.291 50.000 11.46 0.00 41.95 3.55
3768 4015 8.863049 CCAACCATCAATTTTAGAAAAATCTCG 58.137 33.333 0.00 0.00 0.00 4.04
3769 4016 8.375465 CAACCATCAATTTTAGAAAAATCTCGC 58.625 33.333 0.00 0.00 0.00 5.03
3770 4017 7.601856 ACCATCAATTTTAGAAAAATCTCGCA 58.398 30.769 0.00 0.00 0.00 5.10
3771 4018 8.087750 ACCATCAATTTTAGAAAAATCTCGCAA 58.912 29.630 0.00 0.00 0.00 4.85
3785 4032 2.114670 CGCAAGGCCCATGTAGGTG 61.115 63.158 0.00 0.00 34.66 4.00
3789 4036 1.072266 AAGGCCCATGTAGGTGTCAA 58.928 50.000 0.00 0.00 34.66 3.18
3793 4040 2.017049 GCCCATGTAGGTGTCAATGAC 58.983 52.381 6.41 6.41 34.66 3.06
3800 4047 2.568623 AGGTGTCAATGACAAGGGAC 57.431 50.000 18.48 5.03 44.49 4.46
3801 4048 1.073923 AGGTGTCAATGACAAGGGACC 59.926 52.381 18.48 14.09 44.49 4.46
3804 4051 1.073763 TGTCAATGACAAGGGACCTGG 59.926 52.381 14.37 0.00 39.78 4.45
3811 4058 0.478507 ACAAGGGACCTGGTGGAAAG 59.521 55.000 2.82 0.00 37.04 2.62
3812 4059 0.251341 CAAGGGACCTGGTGGAAAGG 60.251 60.000 2.82 0.00 40.93 3.11
3818 4065 1.829138 ACCTGGTGGAAAGGTTAGGT 58.171 50.000 0.00 0.00 46.14 3.08
3819 4066 1.423921 ACCTGGTGGAAAGGTTAGGTG 59.576 52.381 0.00 0.00 46.14 4.00
3820 4067 1.271926 CCTGGTGGAAAGGTTAGGTGG 60.272 57.143 0.00 0.00 34.57 4.61
3821 4068 0.774908 TGGTGGAAAGGTTAGGTGGG 59.225 55.000 0.00 0.00 0.00 4.61
3822 4069 1.069775 GGTGGAAAGGTTAGGTGGGA 58.930 55.000 0.00 0.00 0.00 4.37
3823 4070 1.271762 GGTGGAAAGGTTAGGTGGGAC 60.272 57.143 0.00 0.00 0.00 4.46
3824 4071 0.688487 TGGAAAGGTTAGGTGGGACG 59.312 55.000 0.00 0.00 0.00 4.79
3825 4072 0.689055 GGAAAGGTTAGGTGGGACGT 59.311 55.000 0.00 0.00 0.00 4.34
3826 4073 1.609841 GGAAAGGTTAGGTGGGACGTG 60.610 57.143 0.00 0.00 0.00 4.49
3827 4074 0.399075 AAAGGTTAGGTGGGACGTGG 59.601 55.000 0.00 0.00 0.00 4.94
3828 4075 0.765519 AAGGTTAGGTGGGACGTGGT 60.766 55.000 0.00 0.00 0.00 4.16
3829 4076 1.004200 GGTTAGGTGGGACGTGGTG 60.004 63.158 0.00 0.00 0.00 4.17
3830 4077 1.474332 GGTTAGGTGGGACGTGGTGA 61.474 60.000 0.00 0.00 0.00 4.02
3831 4078 0.393820 GTTAGGTGGGACGTGGTGAA 59.606 55.000 0.00 0.00 0.00 3.18
3832 4079 1.129917 TTAGGTGGGACGTGGTGAAA 58.870 50.000 0.00 0.00 0.00 2.69
3833 4080 1.129917 TAGGTGGGACGTGGTGAAAA 58.870 50.000 0.00 0.00 0.00 2.29
3834 4081 0.179029 AGGTGGGACGTGGTGAAAAG 60.179 55.000 0.00 0.00 0.00 2.27
3835 4082 0.179040 GGTGGGACGTGGTGAAAAGA 60.179 55.000 0.00 0.00 0.00 2.52
3836 4083 1.544759 GGTGGGACGTGGTGAAAAGAT 60.545 52.381 0.00 0.00 0.00 2.40
3837 4084 2.227194 GTGGGACGTGGTGAAAAGATT 58.773 47.619 0.00 0.00 0.00 2.40
3838 4085 3.404899 GTGGGACGTGGTGAAAAGATTA 58.595 45.455 0.00 0.00 0.00 1.75
3839 4086 3.435671 GTGGGACGTGGTGAAAAGATTAG 59.564 47.826 0.00 0.00 0.00 1.73
3840 4087 3.007635 GGGACGTGGTGAAAAGATTAGG 58.992 50.000 0.00 0.00 0.00 2.69
3841 4088 2.418976 GGACGTGGTGAAAAGATTAGGC 59.581 50.000 0.00 0.00 0.00 3.93
3842 4089 3.335579 GACGTGGTGAAAAGATTAGGCT 58.664 45.455 0.00 0.00 0.00 4.58
3843 4090 4.501071 GACGTGGTGAAAAGATTAGGCTA 58.499 43.478 0.00 0.00 0.00 3.93
3844 4091 4.504858 ACGTGGTGAAAAGATTAGGCTAG 58.495 43.478 0.00 0.00 0.00 3.42
3845 4092 3.871594 CGTGGTGAAAAGATTAGGCTAGG 59.128 47.826 0.00 0.00 0.00 3.02
3846 4093 4.200092 GTGGTGAAAAGATTAGGCTAGGG 58.800 47.826 0.00 0.00 0.00 3.53
3847 4094 4.080526 GTGGTGAAAAGATTAGGCTAGGGA 60.081 45.833 0.00 0.00 0.00 4.20
3848 4095 4.080526 TGGTGAAAAGATTAGGCTAGGGAC 60.081 45.833 0.00 0.00 0.00 4.46
3849 4096 4.452825 GTGAAAAGATTAGGCTAGGGACC 58.547 47.826 0.00 0.00 0.00 4.46
3850 4097 4.164413 GTGAAAAGATTAGGCTAGGGACCT 59.836 45.833 0.00 0.00 41.57 3.85
3851 4098 4.409247 TGAAAAGATTAGGCTAGGGACCTC 59.591 45.833 0.00 0.00 38.81 3.85
3852 4099 2.706112 AGATTAGGCTAGGGACCTCC 57.294 55.000 0.00 0.00 38.81 4.30
3863 4110 3.721087 AGGGACCTCCTGTGTTTATTG 57.279 47.619 0.00 0.00 46.07 1.90
3864 4111 2.092323 GGGACCTCCTGTGTTTATTGC 58.908 52.381 0.00 0.00 35.95 3.56
3865 4112 1.737793 GGACCTCCTGTGTTTATTGCG 59.262 52.381 0.00 0.00 0.00 4.85
3866 4113 2.614481 GGACCTCCTGTGTTTATTGCGA 60.614 50.000 0.00 0.00 0.00 5.10
3867 4114 3.071479 GACCTCCTGTGTTTATTGCGAA 58.929 45.455 0.00 0.00 0.00 4.70
3868 4115 3.482436 ACCTCCTGTGTTTATTGCGAAA 58.518 40.909 0.00 0.00 0.00 3.46
3869 4116 3.886505 ACCTCCTGTGTTTATTGCGAAAA 59.113 39.130 0.00 0.00 0.00 2.29
3870 4117 4.023193 ACCTCCTGTGTTTATTGCGAAAAG 60.023 41.667 0.00 0.00 0.00 2.27
3871 4118 4.475944 CTCCTGTGTTTATTGCGAAAAGG 58.524 43.478 0.00 0.00 0.00 3.11
3872 4119 4.138290 TCCTGTGTTTATTGCGAAAAGGA 58.862 39.130 0.00 0.00 0.00 3.36
3873 4120 4.215399 TCCTGTGTTTATTGCGAAAAGGAG 59.785 41.667 0.00 0.00 0.00 3.69
3874 4121 4.023193 CCTGTGTTTATTGCGAAAAGGAGT 60.023 41.667 0.00 0.00 0.00 3.85
3875 4122 5.103290 TGTGTTTATTGCGAAAAGGAGTC 57.897 39.130 0.00 0.00 0.00 3.36
3876 4123 4.148891 GTGTTTATTGCGAAAAGGAGTCG 58.851 43.478 0.00 0.00 41.46 4.18
3881 4128 3.946907 CGAAAAGGAGTCGCGGTT 58.053 55.556 6.13 0.00 0.00 4.44
3882 4129 2.231820 CGAAAAGGAGTCGCGGTTT 58.768 52.632 6.13 0.00 0.00 3.27
3883 4130 0.163146 CGAAAAGGAGTCGCGGTTTC 59.837 55.000 6.13 6.29 0.00 2.78
3884 4131 0.163146 GAAAAGGAGTCGCGGTTTCG 59.837 55.000 6.13 0.00 39.81 3.46
3894 4141 3.423154 CGGTTTCGCACAGGAGGC 61.423 66.667 0.00 0.00 0.00 4.70
3902 4149 4.767255 CACAGGAGGCGGCTCACC 62.767 72.222 36.07 23.17 0.00 4.02
3904 4151 3.710722 CAGGAGGCGGCTCACCTT 61.711 66.667 36.07 17.97 37.77 3.50
3905 4152 3.710722 AGGAGGCGGCTCACCTTG 61.711 66.667 36.07 0.00 37.77 3.61
3906 4153 4.785453 GGAGGCGGCTCACCTTGG 62.785 72.222 36.07 0.00 37.77 3.61
3926 4173 4.986467 GGCCCATCCGATGTCTTT 57.014 55.556 7.60 0.00 0.00 2.52
3927 4174 3.191182 GGCCCATCCGATGTCTTTT 57.809 52.632 7.60 0.00 0.00 2.27
3928 4175 0.740737 GGCCCATCCGATGTCTTTTG 59.259 55.000 7.60 0.00 0.00 2.44
3929 4176 0.101219 GCCCATCCGATGTCTTTTGC 59.899 55.000 7.60 0.00 0.00 3.68
3930 4177 1.462616 CCCATCCGATGTCTTTTGCA 58.537 50.000 7.60 0.00 0.00 4.08
3931 4178 1.818060 CCCATCCGATGTCTTTTGCAA 59.182 47.619 7.60 0.00 0.00 4.08
3932 4179 2.230992 CCCATCCGATGTCTTTTGCAAA 59.769 45.455 8.05 8.05 0.00 3.68
3933 4180 3.119029 CCCATCCGATGTCTTTTGCAAAT 60.119 43.478 13.65 0.00 0.00 2.32
3934 4181 3.861113 CCATCCGATGTCTTTTGCAAATG 59.139 43.478 13.65 15.46 0.00 2.32
3935 4182 4.380761 CCATCCGATGTCTTTTGCAAATGA 60.381 41.667 20.42 20.42 0.00 2.57
3936 4183 4.844998 TCCGATGTCTTTTGCAAATGAA 57.155 36.364 24.47 16.53 0.00 2.57
3937 4184 5.193663 TCCGATGTCTTTTGCAAATGAAA 57.806 34.783 24.47 21.02 0.00 2.69
3938 4185 4.981674 TCCGATGTCTTTTGCAAATGAAAC 59.018 37.500 24.47 16.22 0.00 2.78
3939 4186 4.984161 CCGATGTCTTTTGCAAATGAAACT 59.016 37.500 24.47 14.33 0.00 2.66
3940 4187 5.463061 CCGATGTCTTTTGCAAATGAAACTT 59.537 36.000 24.47 14.20 0.00 2.66
3941 4188 6.346040 CCGATGTCTTTTGCAAATGAAACTTC 60.346 38.462 24.47 19.06 0.00 3.01
3942 4189 5.947503 TGTCTTTTGCAAATGAAACTTCG 57.052 34.783 24.47 2.64 0.00 3.79
3943 4190 4.267452 TGTCTTTTGCAAATGAAACTTCGC 59.733 37.500 24.47 13.48 0.00 4.70
3944 4191 4.267452 GTCTTTTGCAAATGAAACTTCGCA 59.733 37.500 24.47 1.04 0.00 5.10
3945 4192 4.867047 TCTTTTGCAAATGAAACTTCGCAA 59.133 33.333 21.62 0.00 37.57 4.85
3946 4193 5.349817 TCTTTTGCAAATGAAACTTCGCAAA 59.650 32.000 21.62 0.00 44.86 3.68
3947 4194 5.536554 TTTGCAAATGAAACTTCGCAAAA 57.463 30.435 8.05 0.00 43.93 2.44
3948 4195 5.536554 TTGCAAATGAAACTTCGCAAAAA 57.463 30.435 0.00 0.00 36.50 1.94
3949 4196 5.731599 TGCAAATGAAACTTCGCAAAAAT 57.268 30.435 0.00 0.00 0.00 1.82
3950 4197 6.834959 TGCAAATGAAACTTCGCAAAAATA 57.165 29.167 0.00 0.00 0.00 1.40
3951 4198 6.875753 TGCAAATGAAACTTCGCAAAAATAG 58.124 32.000 0.00 0.00 0.00 1.73
3952 4199 6.699204 TGCAAATGAAACTTCGCAAAAATAGA 59.301 30.769 0.00 0.00 0.00 1.98
3953 4200 7.096106 TGCAAATGAAACTTCGCAAAAATAGAG 60.096 33.333 0.00 0.00 0.00 2.43
3954 4201 6.934561 AATGAAACTTCGCAAAAATAGAGC 57.065 33.333 0.00 0.00 0.00 4.09
3955 4202 5.431420 TGAAACTTCGCAAAAATAGAGCA 57.569 34.783 0.00 0.00 0.00 4.26
3956 4203 5.212194 TGAAACTTCGCAAAAATAGAGCAC 58.788 37.500 0.00 0.00 0.00 4.40
3957 4204 4.829064 AACTTCGCAAAAATAGAGCACA 57.171 36.364 0.00 0.00 0.00 4.57
3958 4205 4.147219 ACTTCGCAAAAATAGAGCACAC 57.853 40.909 0.00 0.00 0.00 3.82
3959 4206 3.815401 ACTTCGCAAAAATAGAGCACACT 59.185 39.130 0.00 0.00 0.00 3.55
3960 4207 4.083802 ACTTCGCAAAAATAGAGCACACTC 60.084 41.667 0.00 0.00 43.82 3.51
3972 4219 4.313277 GAGCACACTCTACAGATATGCA 57.687 45.455 0.00 0.00 40.03 3.96
3973 4220 4.047822 GAGCACACTCTACAGATATGCAC 58.952 47.826 0.00 3.24 40.03 4.57
3974 4221 2.791560 GCACACTCTACAGATATGCACG 59.208 50.000 0.00 0.00 0.00 5.34
3975 4222 3.735208 GCACACTCTACAGATATGCACGT 60.735 47.826 0.00 0.00 0.00 4.49
3976 4223 3.793492 CACACTCTACAGATATGCACGTG 59.207 47.826 12.28 12.28 0.00 4.49
3977 4224 2.791560 CACTCTACAGATATGCACGTGC 59.208 50.000 33.11 33.11 42.50 5.34
3978 4225 2.690497 ACTCTACAGATATGCACGTGCT 59.310 45.455 37.59 25.63 42.66 4.40
3979 4226 3.048501 CTCTACAGATATGCACGTGCTG 58.951 50.000 37.59 28.88 42.66 4.41
3998 4245 4.129737 GCTAGCCACCGCGACTCA 62.130 66.667 8.23 0.00 41.18 3.41
3999 4246 2.808315 CTAGCCACCGCGACTCAT 59.192 61.111 8.23 0.00 41.18 2.90
4000 4247 1.589993 CTAGCCACCGCGACTCATG 60.590 63.158 8.23 0.00 41.18 3.07
4001 4248 2.004808 CTAGCCACCGCGACTCATGA 62.005 60.000 8.23 0.00 41.18 3.07
4002 4249 2.004808 TAGCCACCGCGACTCATGAG 62.005 60.000 21.37 21.37 41.18 2.90
4003 4250 2.887568 CCACCGCGACTCATGAGC 60.888 66.667 22.83 13.93 0.00 4.26
4004 4251 2.182791 CACCGCGACTCATGAGCT 59.817 61.111 22.83 9.93 0.00 4.09
4005 4252 1.433471 CACCGCGACTCATGAGCTA 59.567 57.895 22.83 0.00 0.00 3.32
4006 4253 0.593518 CACCGCGACTCATGAGCTAG 60.594 60.000 22.83 14.44 0.00 3.42
4007 4254 1.659954 CCGCGACTCATGAGCTAGC 60.660 63.158 22.83 21.67 0.00 3.42
4008 4255 1.659954 CGCGACTCATGAGCTAGCC 60.660 63.158 22.83 3.49 0.00 3.93
4009 4256 1.739049 GCGACTCATGAGCTAGCCT 59.261 57.895 22.83 1.35 0.00 4.58
4010 4257 0.318614 GCGACTCATGAGCTAGCCTC 60.319 60.000 22.83 10.35 41.15 4.70
4011 4258 0.040514 CGACTCATGAGCTAGCCTCG 60.041 60.000 22.83 17.98 43.82 4.63
4012 4259 1.028905 GACTCATGAGCTAGCCTCGT 58.971 55.000 22.83 7.07 43.82 4.18
4016 4263 1.739049 ATGAGCTAGCCTCGTGAGC 59.261 57.895 12.13 0.00 43.82 4.26
4018 4265 0.107165 TGAGCTAGCCTCGTGAGCTA 60.107 55.000 12.13 4.01 46.42 3.32
4019 4266 1.243902 GAGCTAGCCTCGTGAGCTAT 58.756 55.000 12.13 0.00 46.42 2.97
4020 4267 1.611491 GAGCTAGCCTCGTGAGCTATT 59.389 52.381 12.13 0.00 46.42 1.73
4021 4268 2.035321 GAGCTAGCCTCGTGAGCTATTT 59.965 50.000 12.13 0.00 46.42 1.40
4022 4269 2.432510 AGCTAGCCTCGTGAGCTATTTT 59.567 45.455 12.13 0.00 44.65 1.82
4023 4270 2.541762 GCTAGCCTCGTGAGCTATTTTG 59.458 50.000 2.29 0.56 41.79 2.44
4024 4271 3.738281 GCTAGCCTCGTGAGCTATTTTGA 60.738 47.826 2.29 0.00 41.79 2.69
4025 4272 3.334583 AGCCTCGTGAGCTATTTTGAA 57.665 42.857 0.00 0.00 39.29 2.69
4026 4273 3.674997 AGCCTCGTGAGCTATTTTGAAA 58.325 40.909 0.00 0.00 39.29 2.69
4027 4274 4.265073 AGCCTCGTGAGCTATTTTGAAAT 58.735 39.130 0.00 0.00 39.29 2.17
4028 4275 5.428253 AGCCTCGTGAGCTATTTTGAAATA 58.572 37.500 0.00 0.00 39.29 1.40
4029 4276 6.058183 AGCCTCGTGAGCTATTTTGAAATAT 58.942 36.000 0.00 0.00 39.29 1.28
4030 4277 6.543831 AGCCTCGTGAGCTATTTTGAAATATT 59.456 34.615 0.00 0.00 39.29 1.28
4031 4278 7.067494 AGCCTCGTGAGCTATTTTGAAATATTT 59.933 33.333 0.00 0.00 39.29 1.40
4032 4279 7.166473 GCCTCGTGAGCTATTTTGAAATATTTG 59.834 37.037 5.17 0.00 31.03 2.32
4033 4280 8.184192 CCTCGTGAGCTATTTTGAAATATTTGT 58.816 33.333 5.17 0.00 31.03 2.83
4036 4283 8.947940 CGTGAGCTATTTTGAAATATTTGTAGC 58.052 33.333 5.17 10.57 31.03 3.58
4037 4284 9.787532 GTGAGCTATTTTGAAATATTTGTAGCA 57.212 29.630 5.17 0.00 31.03 3.49
4040 4287 9.669353 AGCTATTTTGAAATATTTGTAGCATCG 57.331 29.630 5.17 0.00 31.03 3.84
4041 4288 9.663904 GCTATTTTGAAATATTTGTAGCATCGA 57.336 29.630 5.17 0.00 31.03 3.59
4045 4292 9.853555 TTTTGAAATATTTGTAGCATCGATGTT 57.146 25.926 25.47 22.27 0.00 2.71
4048 4295 9.541143 TGAAATATTTGTAGCATCGATGTTAGA 57.459 29.630 25.47 19.55 0.00 2.10
4052 4299 7.849804 ATTTGTAGCATCGATGTTAGAAACT 57.150 32.000 32.15 22.66 38.70 2.66
4053 4300 6.647212 TTGTAGCATCGATGTTAGAAACTG 57.353 37.500 23.43 0.67 0.00 3.16
4054 4301 4.566759 TGTAGCATCGATGTTAGAAACTGC 59.433 41.667 25.47 15.49 0.00 4.40
4055 4302 2.939103 AGCATCGATGTTAGAAACTGCC 59.061 45.455 25.47 5.31 30.50 4.85
4056 4303 2.285834 GCATCGATGTTAGAAACTGCCG 60.286 50.000 25.47 0.00 0.00 5.69
4057 4304 2.736144 TCGATGTTAGAAACTGCCGT 57.264 45.000 0.00 0.00 0.00 5.68
4058 4305 3.853831 TCGATGTTAGAAACTGCCGTA 57.146 42.857 0.00 0.00 0.00 4.02
4059 4306 3.766151 TCGATGTTAGAAACTGCCGTAG 58.234 45.455 0.00 0.00 0.00 3.51
4060 4307 3.192001 TCGATGTTAGAAACTGCCGTAGT 59.808 43.478 0.00 0.00 42.89 2.73
4061 4308 3.303495 CGATGTTAGAAACTGCCGTAGTG 59.697 47.826 0.00 0.00 40.26 2.74
4062 4309 3.034721 TGTTAGAAACTGCCGTAGTGG 57.965 47.619 0.00 0.00 40.26 4.00
4083 4330 2.807247 AAAAACAAGGCCAGCTCGT 58.193 47.368 5.01 0.00 0.00 4.18
4084 4331 0.385390 AAAAACAAGGCCAGCTCGTG 59.615 50.000 5.01 0.00 0.00 4.35
4085 4332 0.465460 AAAACAAGGCCAGCTCGTGA 60.465 50.000 5.01 0.00 0.00 4.35
4086 4333 0.465460 AAACAAGGCCAGCTCGTGAA 60.465 50.000 5.01 0.00 0.00 3.18
4087 4334 0.465460 AACAAGGCCAGCTCGTGAAA 60.465 50.000 5.01 0.00 0.00 2.69
4088 4335 0.465460 ACAAGGCCAGCTCGTGAAAA 60.465 50.000 5.01 0.00 0.00 2.29
4089 4336 0.883833 CAAGGCCAGCTCGTGAAAAT 59.116 50.000 5.01 0.00 0.00 1.82
4090 4337 1.270550 CAAGGCCAGCTCGTGAAAATT 59.729 47.619 5.01 0.00 0.00 1.82
4091 4338 1.168714 AGGCCAGCTCGTGAAAATTC 58.831 50.000 5.01 0.00 0.00 2.17
4092 4339 0.171231 GGCCAGCTCGTGAAAATTCC 59.829 55.000 0.00 0.00 0.00 3.01
4093 4340 0.881118 GCCAGCTCGTGAAAATTCCA 59.119 50.000 0.00 0.00 0.00 3.53
4094 4341 1.474077 GCCAGCTCGTGAAAATTCCAT 59.526 47.619 0.00 0.00 0.00 3.41
4095 4342 2.682856 GCCAGCTCGTGAAAATTCCATA 59.317 45.455 0.00 0.00 0.00 2.74
4096 4343 3.128589 GCCAGCTCGTGAAAATTCCATAA 59.871 43.478 0.00 0.00 0.00 1.90
4097 4344 4.380444 GCCAGCTCGTGAAAATTCCATAAA 60.380 41.667 0.00 0.00 0.00 1.40
4098 4345 5.708948 CCAGCTCGTGAAAATTCCATAAAA 58.291 37.500 0.00 0.00 0.00 1.52
4099 4346 5.572896 CCAGCTCGTGAAAATTCCATAAAAC 59.427 40.000 0.00 0.00 0.00 2.43
4100 4347 6.381801 CAGCTCGTGAAAATTCCATAAAACT 58.618 36.000 0.00 0.00 0.00 2.66
4101 4348 6.863126 CAGCTCGTGAAAATTCCATAAAACTT 59.137 34.615 0.00 0.00 0.00 2.66
4102 4349 6.863126 AGCTCGTGAAAATTCCATAAAACTTG 59.137 34.615 0.00 0.00 0.00 3.16
4103 4350 6.640907 GCTCGTGAAAATTCCATAAAACTTGT 59.359 34.615 0.00 0.00 0.00 3.16
4104 4351 7.358352 GCTCGTGAAAATTCCATAAAACTTGTG 60.358 37.037 0.00 0.00 0.00 3.33
4105 4352 6.920758 TCGTGAAAATTCCATAAAACTTGTGG 59.079 34.615 0.00 0.00 42.68 4.17
4106 4353 6.145371 CGTGAAAATTCCATAAAACTTGTGGG 59.855 38.462 2.78 0.00 41.74 4.61
4107 4354 7.213678 GTGAAAATTCCATAAAACTTGTGGGA 58.786 34.615 2.78 0.00 41.74 4.37
4108 4355 7.384932 GTGAAAATTCCATAAAACTTGTGGGAG 59.615 37.037 2.78 0.00 41.74 4.30
4109 4356 7.288852 TGAAAATTCCATAAAACTTGTGGGAGA 59.711 33.333 2.78 0.00 41.74 3.71
4110 4357 6.840780 AATTCCATAAAACTTGTGGGAGAG 57.159 37.500 2.78 0.00 41.74 3.20
4111 4358 4.301072 TCCATAAAACTTGTGGGAGAGG 57.699 45.455 2.78 0.00 41.74 3.69
4112 4359 3.010138 TCCATAAAACTTGTGGGAGAGGG 59.990 47.826 2.78 0.00 41.74 4.30
4113 4360 3.010138 CCATAAAACTTGTGGGAGAGGGA 59.990 47.826 0.00 0.00 38.18 4.20
4114 4361 4.325344 CCATAAAACTTGTGGGAGAGGGAT 60.325 45.833 0.00 0.00 38.18 3.85
4115 4362 3.903530 AAAACTTGTGGGAGAGGGATT 57.096 42.857 0.00 0.00 0.00 3.01
4116 4363 2.887151 AACTTGTGGGAGAGGGATTG 57.113 50.000 0.00 0.00 0.00 2.67
4117 4364 2.044793 ACTTGTGGGAGAGGGATTGA 57.955 50.000 0.00 0.00 0.00 2.57
4118 4365 2.348472 ACTTGTGGGAGAGGGATTGAA 58.652 47.619 0.00 0.00 0.00 2.69
4119 4366 2.040412 ACTTGTGGGAGAGGGATTGAAC 59.960 50.000 0.00 0.00 0.00 3.18
4120 4367 1.741028 TGTGGGAGAGGGATTGAACA 58.259 50.000 0.00 0.00 0.00 3.18
4121 4368 1.351017 TGTGGGAGAGGGATTGAACAC 59.649 52.381 0.00 0.00 0.00 3.32
4122 4369 1.351017 GTGGGAGAGGGATTGAACACA 59.649 52.381 0.00 0.00 0.00 3.72
4123 4370 2.061848 TGGGAGAGGGATTGAACACAA 58.938 47.619 0.00 0.00 0.00 3.33
4124 4371 2.040278 TGGGAGAGGGATTGAACACAAG 59.960 50.000 0.00 0.00 0.00 3.16
4125 4372 2.040412 GGGAGAGGGATTGAACACAAGT 59.960 50.000 0.00 0.00 0.00 3.16
4126 4373 3.339141 GGAGAGGGATTGAACACAAGTC 58.661 50.000 0.00 0.00 0.00 3.01
4127 4374 3.339141 GAGAGGGATTGAACACAAGTCC 58.661 50.000 0.00 0.00 0.00 3.85
4128 4375 2.982488 AGAGGGATTGAACACAAGTCCT 59.018 45.455 0.00 0.00 34.81 3.85
4129 4376 3.008485 AGAGGGATTGAACACAAGTCCTC 59.992 47.826 17.82 17.82 41.43 3.71
4130 4377 2.040412 AGGGATTGAACACAAGTCCTCC 59.960 50.000 0.00 0.00 30.18 4.30
4131 4378 2.437413 GGATTGAACACAAGTCCTCCC 58.563 52.381 0.00 0.00 0.00 4.30
4132 4379 2.224769 GGATTGAACACAAGTCCTCCCA 60.225 50.000 0.00 0.00 0.00 4.37
4133 4380 2.341846 TTGAACACAAGTCCTCCCAC 57.658 50.000 0.00 0.00 0.00 4.61
4134 4381 0.472471 TGAACACAAGTCCTCCCACC 59.528 55.000 0.00 0.00 0.00 4.61
4135 4382 0.472471 GAACACAAGTCCTCCCACCA 59.528 55.000 0.00 0.00 0.00 4.17
4136 4383 0.474184 AACACAAGTCCTCCCACCAG 59.526 55.000 0.00 0.00 0.00 4.00
4137 4384 0.399949 ACACAAGTCCTCCCACCAGA 60.400 55.000 0.00 0.00 0.00 3.86
4138 4385 0.322975 CACAAGTCCTCCCACCAGAG 59.677 60.000 0.00 0.00 0.00 3.35
4139 4386 0.191064 ACAAGTCCTCCCACCAGAGA 59.809 55.000 0.00 0.00 35.82 3.10
4140 4387 1.352083 CAAGTCCTCCCACCAGAGAA 58.648 55.000 0.00 0.00 35.82 2.87
4141 4388 1.277557 CAAGTCCTCCCACCAGAGAAG 59.722 57.143 0.00 0.00 35.82 2.85
4142 4389 0.489567 AGTCCTCCCACCAGAGAAGT 59.510 55.000 0.00 0.00 35.82 3.01
4143 4390 0.610687 GTCCTCCCACCAGAGAAGTG 59.389 60.000 0.00 0.00 35.82 3.16
4144 4391 1.194781 TCCTCCCACCAGAGAAGTGC 61.195 60.000 0.00 0.00 35.82 4.40
4145 4392 1.483595 CCTCCCACCAGAGAAGTGCA 61.484 60.000 0.00 0.00 35.82 4.57
4146 4393 0.617413 CTCCCACCAGAGAAGTGCAT 59.383 55.000 0.00 0.00 35.82 3.96
4147 4394 1.833630 CTCCCACCAGAGAAGTGCATA 59.166 52.381 0.00 0.00 35.82 3.14
4148 4395 1.555075 TCCCACCAGAGAAGTGCATAC 59.445 52.381 0.00 0.00 33.75 2.39
4149 4396 1.278985 CCCACCAGAGAAGTGCATACA 59.721 52.381 0.00 0.00 33.75 2.29
4150 4397 2.092753 CCCACCAGAGAAGTGCATACAT 60.093 50.000 0.00 0.00 33.75 2.29
4151 4398 3.134623 CCCACCAGAGAAGTGCATACATA 59.865 47.826 0.00 0.00 33.75 2.29
4152 4399 4.375272 CCACCAGAGAAGTGCATACATAG 58.625 47.826 0.00 0.00 33.75 2.23
4153 4400 3.806521 CACCAGAGAAGTGCATACATAGC 59.193 47.826 0.00 0.00 0.00 2.97
4154 4401 3.181461 ACCAGAGAAGTGCATACATAGCC 60.181 47.826 0.00 0.00 0.00 3.93
4155 4402 3.181462 CCAGAGAAGTGCATACATAGCCA 60.181 47.826 0.00 0.00 0.00 4.75
4156 4403 3.806521 CAGAGAAGTGCATACATAGCCAC 59.193 47.826 0.00 0.00 0.00 5.01
4157 4404 3.708631 AGAGAAGTGCATACATAGCCACT 59.291 43.478 0.00 0.00 0.00 4.00
4158 4405 4.895889 AGAGAAGTGCATACATAGCCACTA 59.104 41.667 0.00 0.00 0.00 2.74
4159 4406 5.541868 AGAGAAGTGCATACATAGCCACTAT 59.458 40.000 0.00 0.00 0.00 2.12
4160 4407 6.721668 AGAGAAGTGCATACATAGCCACTATA 59.278 38.462 0.00 0.00 0.00 1.31
4161 4408 7.233553 AGAGAAGTGCATACATAGCCACTATAA 59.766 37.037 0.00 0.00 0.00 0.98
4162 4409 7.911651 AGAAGTGCATACATAGCCACTATAAT 58.088 34.615 0.00 0.00 0.00 1.28
4163 4410 9.035890 AGAAGTGCATACATAGCCACTATAATA 57.964 33.333 0.00 0.00 0.00 0.98
4164 4411 9.088512 GAAGTGCATACATAGCCACTATAATAC 57.911 37.037 0.00 0.00 0.00 1.89
4165 4412 7.258441 AGTGCATACATAGCCACTATAATACG 58.742 38.462 0.00 0.00 0.00 3.06
4166 4413 6.019801 GTGCATACATAGCCACTATAATACGC 60.020 42.308 0.00 0.00 0.00 4.42
4167 4414 5.173312 GCATACATAGCCACTATAATACGCG 59.827 44.000 3.53 3.53 0.00 6.01
4168 4415 4.106029 ACATAGCCACTATAATACGCGG 57.894 45.455 12.47 0.00 0.00 6.46
4169 4416 2.642139 TAGCCACTATAATACGCGGC 57.358 50.000 12.47 0.00 39.90 6.53
4170 4417 0.677288 AGCCACTATAATACGCGGCA 59.323 50.000 12.47 0.00 42.10 5.69
4171 4418 1.068474 GCCACTATAATACGCGGCAG 58.932 55.000 12.47 0.00 39.38 4.85
4172 4419 1.336517 GCCACTATAATACGCGGCAGA 60.337 52.381 12.47 0.00 39.38 4.26
4173 4420 2.674177 GCCACTATAATACGCGGCAGAT 60.674 50.000 12.47 0.59 39.38 2.90
4174 4421 3.585862 CCACTATAATACGCGGCAGATT 58.414 45.455 12.47 7.04 0.00 2.40
4175 4422 4.740268 CCACTATAATACGCGGCAGATTA 58.260 43.478 12.47 9.12 0.00 1.75
4176 4423 4.798907 CCACTATAATACGCGGCAGATTAG 59.201 45.833 12.47 6.87 0.00 1.73
4177 4424 5.392703 CCACTATAATACGCGGCAGATTAGA 60.393 44.000 12.47 5.38 0.00 2.10
4178 4425 6.266323 CACTATAATACGCGGCAGATTAGAT 58.734 40.000 12.47 0.00 0.00 1.98
4179 4426 6.752351 CACTATAATACGCGGCAGATTAGATT 59.248 38.462 12.47 0.00 0.00 2.40
4180 4427 7.275779 CACTATAATACGCGGCAGATTAGATTT 59.724 37.037 12.47 0.00 0.00 2.17
4181 4428 7.817962 ACTATAATACGCGGCAGATTAGATTTT 59.182 33.333 12.47 0.00 0.00 1.82
4182 4429 5.751243 AATACGCGGCAGATTAGATTTTT 57.249 34.783 12.47 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.301244 ATAAGATGCTCCGCCGCTG 60.301 57.895 0.00 0.00 0.00 5.18
35 36 6.433093 ACCTTTAATAAGCGAGAACAACCAAT 59.567 34.615 0.00 0.00 0.00 3.16
42 48 4.786575 CGCAAACCTTTAATAAGCGAGAAC 59.213 41.667 0.00 0.00 45.78 3.01
49 55 5.116983 CACAGCAACGCAAACCTTTAATAAG 59.883 40.000 0.00 0.00 0.00 1.73
111 119 4.677151 AGGTTCCGGCCCCTTCCT 62.677 66.667 5.95 0.00 0.00 3.36
112 120 4.111053 GAGGTTCCGGCCCCTTCC 62.111 72.222 12.40 0.00 0.00 3.46
126 134 4.112341 GCAAGCAAGCGCCAGAGG 62.112 66.667 2.29 0.00 39.83 3.69
166 204 3.286751 GCAGCCGTGGAAAGCACA 61.287 61.111 0.00 0.00 0.00 4.57
171 209 2.281484 GGTCTGCAGCCGTGGAAA 60.281 61.111 9.47 0.00 0.00 3.13
191 237 4.140536 CAGACCTTCTCAAAAGGAGCTTT 58.859 43.478 10.68 0.00 43.70 3.51
192 238 3.749226 CAGACCTTCTCAAAAGGAGCTT 58.251 45.455 10.68 0.00 43.70 3.74
193 239 2.551938 GCAGACCTTCTCAAAAGGAGCT 60.552 50.000 10.68 4.84 43.70 4.09
194 240 1.809547 GCAGACCTTCTCAAAAGGAGC 59.190 52.381 10.68 7.61 43.70 4.70
195 241 2.072298 CGCAGACCTTCTCAAAAGGAG 58.928 52.381 10.68 2.02 45.49 3.69
196 242 1.416401 ACGCAGACCTTCTCAAAAGGA 59.584 47.619 10.68 0.00 39.81 3.36
197 243 1.884235 ACGCAGACCTTCTCAAAAGG 58.116 50.000 2.29 2.29 43.05 3.11
239 286 1.978782 CGAGGAACTTGCGCAAAAATC 59.021 47.619 25.01 20.12 41.55 2.17
280 327 7.174946 CACCTAGAATCAAATATATTTGCGGGT 59.825 37.037 26.67 22.01 45.06 5.28
281 328 7.390440 TCACCTAGAATCAAATATATTTGCGGG 59.610 37.037 26.67 21.56 45.06 6.13
282 329 8.322906 TCACCTAGAATCAAATATATTTGCGG 57.677 34.615 26.67 20.49 45.06 5.69
283 330 9.979270 GATCACCTAGAATCAAATATATTTGCG 57.021 33.333 26.67 10.37 45.06 4.85
300 347 7.905265 ACAATCCAATCTATGAGATCACCTAG 58.095 38.462 0.00 0.00 32.89 3.02
312 359 7.935755 CACCTCTGTATCAACAATCCAATCTAT 59.064 37.037 0.00 0.00 34.49 1.98
338 391 2.698855 TGAACAGCCTTAGGATCAGC 57.301 50.000 0.69 0.00 0.00 4.26
352 405 4.002906 AGAAGTGGCGTAAGAATGAACA 57.997 40.909 0.00 0.00 43.02 3.18
355 408 3.447586 AGCTAGAAGTGGCGTAAGAATGA 59.552 43.478 0.00 0.00 43.02 2.57
402 464 6.466812 TGCACTAATCTCTCAAGTCAATCAA 58.533 36.000 0.00 0.00 0.00 2.57
485 547 4.250464 CGGCAGAGTTCCTTGTAATACAA 58.750 43.478 5.66 5.66 36.54 2.41
488 550 3.369052 CCACGGCAGAGTTCCTTGTAATA 60.369 47.826 0.00 0.00 0.00 0.98
491 553 0.320374 CCACGGCAGAGTTCCTTGTA 59.680 55.000 0.00 0.00 0.00 2.41
497 559 0.603569 TCTCTTCCACGGCAGAGTTC 59.396 55.000 11.75 0.00 38.20 3.01
507 569 3.922171 AACCATGGAGATCTCTTCCAC 57.078 47.619 21.47 5.87 36.24 4.02
508 570 4.782691 TGTTAACCATGGAGATCTCTTCCA 59.217 41.667 21.47 13.26 37.99 3.53
517 579 1.349688 AGCCGTTGTTAACCATGGAGA 59.650 47.619 21.47 1.86 0.00 3.71
653 718 2.032620 CTCGATAAGTAGTGCCACCCT 58.967 52.381 0.00 0.00 0.00 4.34
655 720 1.538419 GCCTCGATAAGTAGTGCCACC 60.538 57.143 0.00 0.00 0.00 4.61
656 721 1.136305 TGCCTCGATAAGTAGTGCCAC 59.864 52.381 0.00 0.00 0.00 5.01
657 722 1.480789 TGCCTCGATAAGTAGTGCCA 58.519 50.000 0.00 0.00 0.00 4.92
671 736 2.362717 AGAACCTAGACGCTATTGCCTC 59.637 50.000 0.00 0.00 35.36 4.70
739 804 3.876341 ACGGAAGATAAATACCCGCAAA 58.124 40.909 0.00 0.00 43.56 3.68
814 879 4.221703 CCCTCACCGAGATCTAGCAATTAT 59.778 45.833 0.00 0.00 0.00 1.28
865 930 1.070445 CCTCCCAGGAATGCGCTAG 59.930 63.158 9.73 0.00 37.67 3.42
892 957 3.517593 CGCAACAAAAACGTAAATGCAC 58.482 40.909 0.00 0.00 32.80 4.57
990 1062 4.281435 TGTGCATTGACCATTTTCACAGAT 59.719 37.500 0.00 0.00 0.00 2.90
1054 1126 2.203294 ACCGCCACCAGAAACCAC 60.203 61.111 0.00 0.00 0.00 4.16
1080 1152 1.768275 ACACCATTCTGTGTCTGTCCA 59.232 47.619 0.00 0.00 46.15 4.02
1081 1153 2.550830 ACACCATTCTGTGTCTGTCC 57.449 50.000 0.00 0.00 46.15 4.02
1100 1172 1.138859 CTGACAAGGTGGTGTCTGTGA 59.861 52.381 6.85 0.00 46.70 3.58
1245 1317 2.305052 TCACCACGAGAAGGAGAGACTA 59.695 50.000 0.00 0.00 0.00 2.59
1277 1349 8.976986 ATTCACATAAGAAAGAAATGCAGAAC 57.023 30.769 0.00 0.00 0.00 3.01
1315 1387 7.939039 TGAACCATCTTGTTAACTGAAGAATCT 59.061 33.333 11.22 0.00 32.07 2.40
1367 1446 2.076863 GGTAAGTTGTGCTACAGCCTG 58.923 52.381 0.00 0.00 41.18 4.85
1381 1461 2.335933 ACTACAAGCCCAGTGGTAAGT 58.664 47.619 8.74 3.84 0.00 2.24
1386 1466 3.695830 TCTAAACTACAAGCCCAGTGG 57.304 47.619 0.63 0.63 0.00 4.00
1476 1559 5.302568 AGCTGAAGAACCAAATTGATTGACA 59.697 36.000 0.00 0.00 41.85 3.58
1606 1707 2.890311 CACATAAGGCCCTGAACAAACA 59.110 45.455 0.00 0.00 0.00 2.83
1672 1787 7.433680 ACACTTTGGTCAATCAATAACCTTTC 58.566 34.615 0.00 0.00 34.05 2.62
1673 1788 7.069331 TGACACTTTGGTCAATCAATAACCTTT 59.931 33.333 0.00 0.00 44.34 3.11
1674 1789 6.549364 TGACACTTTGGTCAATCAATAACCTT 59.451 34.615 0.00 0.00 44.34 3.50
1675 1790 6.068010 TGACACTTTGGTCAATCAATAACCT 58.932 36.000 0.00 0.00 44.34 3.50
1676 1791 6.325919 TGACACTTTGGTCAATCAATAACC 57.674 37.500 0.00 0.00 44.34 2.85
1743 1858 3.025287 AGCTTTGTAAATTTGTGGGCG 57.975 42.857 0.00 0.00 0.00 6.13
2105 2220 3.748568 GCTATAGCCTGCACCAAGATAAC 59.251 47.826 14.13 0.00 34.31 1.89
2122 2237 3.181475 GCTGACTACAGTTGCAGGCTATA 60.181 47.826 0.00 0.00 45.04 1.31
2282 2397 3.900855 GCAGACTGCAGGGACATG 58.099 61.111 22.62 9.80 44.26 3.21
2291 2406 0.520404 CACCAGATTGTGCAGACTGC 59.480 55.000 20.86 20.86 45.29 4.40
2425 2552 1.372087 GCCGAAAGCCAGGATCAGTG 61.372 60.000 0.00 0.00 34.35 3.66
2442 2569 2.765122 TGCAAAGCATAAAACTTGGCC 58.235 42.857 0.00 0.00 42.41 5.36
2476 2603 3.005791 AGTTGCAAATGCCTTGTCCTAAC 59.994 43.478 0.00 0.00 41.18 2.34
2569 2716 3.070018 ACAAAATCAGGAAGAGAGCACG 58.930 45.455 0.00 0.00 0.00 5.34
2574 2721 8.924511 ATCAACTTAACAAAATCAGGAAGAGA 57.075 30.769 0.00 0.00 0.00 3.10
2575 2722 9.617975 GAATCAACTTAACAAAATCAGGAAGAG 57.382 33.333 0.00 0.00 0.00 2.85
2598 2745 7.502561 GTGTATAAGGGTAAAAGGATGCAGAAT 59.497 37.037 0.00 0.00 0.00 2.40
2645 2793 5.583854 CACACTTGATCTTGGAGAAGTATGG 59.416 44.000 0.00 0.00 0.00 2.74
2708 2861 2.221169 CAATGCCGTACATGCCTACAT 58.779 47.619 0.00 0.00 39.60 2.29
2709 2862 1.065782 ACAATGCCGTACATGCCTACA 60.066 47.619 0.00 0.00 39.60 2.74
2710 2863 1.663695 ACAATGCCGTACATGCCTAC 58.336 50.000 0.00 0.00 39.60 3.18
2711 2864 2.411628 AACAATGCCGTACATGCCTA 57.588 45.000 0.00 0.00 39.60 3.93
2712 2865 2.411628 TAACAATGCCGTACATGCCT 57.588 45.000 0.00 0.00 39.60 4.75
2713 2866 2.031157 GGATAACAATGCCGTACATGCC 60.031 50.000 0.00 0.00 39.60 4.40
2714 2867 2.616376 TGGATAACAATGCCGTACATGC 59.384 45.455 0.00 0.00 39.60 4.06
2734 2887 5.082059 GCACTGTAAACGATGATGAACTTG 58.918 41.667 0.00 0.00 0.00 3.16
2742 2895 2.224185 ACCACAGCACTGTAAACGATGA 60.224 45.455 2.38 0.00 42.83 2.92
2761 2914 1.279840 GTGCGACTGACAAGCAACC 59.720 57.895 2.10 0.00 42.93 3.77
2794 2947 5.824624 GGATATGAGTCAGATTTCAGGCAAA 59.175 40.000 1.00 0.00 0.00 3.68
2813 2966 6.325028 TCATCTGAAGAAGGAGAAACGGATAT 59.675 38.462 0.00 0.00 0.00 1.63
2815 2968 4.467795 TCATCTGAAGAAGGAGAAACGGAT 59.532 41.667 0.00 0.00 0.00 4.18
2831 2984 1.973515 AGCAACCACACTCTCATCTGA 59.026 47.619 0.00 0.00 0.00 3.27
2935 3088 1.220206 CCTGATGCGGCTGTTCTCT 59.780 57.895 0.00 0.00 0.00 3.10
3236 3389 0.106369 CCCTGCCATGATCCACACAT 60.106 55.000 0.00 0.00 0.00 3.21
3269 3423 0.981183 ACGATACAAACTCAGCCCCA 59.019 50.000 0.00 0.00 0.00 4.96
3270 3424 1.338769 ACACGATACAAACTCAGCCCC 60.339 52.381 0.00 0.00 0.00 5.80
3271 3425 2.094762 ACACGATACAAACTCAGCCC 57.905 50.000 0.00 0.00 0.00 5.19
3272 3426 2.806244 ACAACACGATACAAACTCAGCC 59.194 45.455 0.00 0.00 0.00 4.85
3274 3428 6.183360 GGTGATACAACACGATACAAACTCAG 60.183 42.308 0.00 0.00 41.12 3.35
3275 3429 5.636121 GGTGATACAACACGATACAAACTCA 59.364 40.000 0.00 0.00 41.12 3.41
3298 3453 1.165270 GGGTTCCACTTCACATTCGG 58.835 55.000 0.00 0.00 0.00 4.30
3303 3458 0.184933 CCCTTGGGTTCCACTTCACA 59.815 55.000 0.00 0.00 30.78 3.58
3319 3474 2.526873 AGACTTCCACCGCACCCT 60.527 61.111 0.00 0.00 0.00 4.34
3424 3598 1.027255 CCGTCACACCCACACACAAA 61.027 55.000 0.00 0.00 0.00 2.83
3427 3601 2.590575 CCCGTCACACCCACACAC 60.591 66.667 0.00 0.00 0.00 3.82
3434 3608 1.471119 TAGATCAGTCCCGTCACACC 58.529 55.000 0.00 0.00 0.00 4.16
3445 3619 7.550906 GTGTGGCTTTCTTCTAATTAGATCAGT 59.449 37.037 15.82 0.00 31.40 3.41
3453 3696 6.575162 AAATCGTGTGGCTTTCTTCTAATT 57.425 33.333 0.00 0.00 0.00 1.40
3489 3732 6.202331 TCACAGTCTCAATCCCCTCTAATTA 58.798 40.000 0.00 0.00 0.00 1.40
3507 3750 3.548818 GCGTTTTGATTCAGCTTCACAGT 60.549 43.478 0.00 0.00 0.00 3.55
3511 3754 1.269448 GGGCGTTTTGATTCAGCTTCA 59.731 47.619 0.00 0.00 0.00 3.02
3564 3807 2.011122 AGAGTTGTCCGGGAAGAAGA 57.989 50.000 0.00 0.00 0.00 2.87
3578 3821 7.956328 TGAGATATGTGGTGTAGTAAGAGTT 57.044 36.000 0.00 0.00 0.00 3.01
3580 3823 7.946207 ACATGAGATATGTGGTGTAGTAAGAG 58.054 38.462 0.00 0.00 0.00 2.85
3581 3824 7.898014 ACATGAGATATGTGGTGTAGTAAGA 57.102 36.000 0.00 0.00 0.00 2.10
3591 3834 5.464722 GTGAGCAGTAACATGAGATATGTGG 59.535 44.000 0.00 0.00 31.80 4.17
3598 3841 6.209589 AGTTTCTAGTGAGCAGTAACATGAGA 59.790 38.462 0.00 0.00 0.00 3.27
3604 3847 4.617645 CGTCAGTTTCTAGTGAGCAGTAAC 59.382 45.833 0.00 0.00 34.44 2.50
3638 3881 5.304101 ACAGGTTGATTTGCTGGTTAATTCA 59.696 36.000 0.00 0.00 0.00 2.57
3641 3884 5.806654 AACAGGTTGATTTGCTGGTTAAT 57.193 34.783 0.00 0.00 0.00 1.40
3668 3911 8.086522 CCAAGATCTGATCAAACACAAAATCTT 58.913 33.333 19.12 0.00 32.67 2.40
3671 3914 6.268387 ACCCAAGATCTGATCAAACACAAAAT 59.732 34.615 19.12 0.00 0.00 1.82
3680 3923 5.818887 TCAATGAACCCAAGATCTGATCAA 58.181 37.500 19.12 0.00 0.00 2.57
3690 3937 7.972277 CAGTAATTTCTCATCAATGAACCCAAG 59.028 37.037 0.00 0.00 36.18 3.61
3695 3942 9.897744 TCAAACAGTAATTTCTCATCAATGAAC 57.102 29.630 0.00 0.00 36.18 3.18
3714 3961 5.649782 AAGCTCACCCAATATTCAAACAG 57.350 39.130 0.00 0.00 0.00 3.16
3719 3966 5.437060 GACCTAAAGCTCACCCAATATTCA 58.563 41.667 0.00 0.00 0.00 2.57
3720 3967 4.822350 GGACCTAAAGCTCACCCAATATTC 59.178 45.833 0.00 0.00 0.00 1.75
3726 3973 1.073284 GTTGGACCTAAAGCTCACCCA 59.927 52.381 0.00 0.00 0.00 4.51
3727 3974 1.613520 GGTTGGACCTAAAGCTCACCC 60.614 57.143 0.00 0.00 34.73 4.61
3730 3977 2.642311 TGATGGTTGGACCTAAAGCTCA 59.358 45.455 0.00 0.00 39.58 4.26
3731 3978 3.350219 TGATGGTTGGACCTAAAGCTC 57.650 47.619 0.00 0.00 39.58 4.09
3732 3979 3.806949 TTGATGGTTGGACCTAAAGCT 57.193 42.857 0.00 0.00 39.58 3.74
3741 3988 9.927668 GAGATTTTTCTAAAATTGATGGTTGGA 57.072 29.630 0.00 0.00 0.00 3.53
3746 3993 8.464770 TTGCGAGATTTTTCTAAAATTGATGG 57.535 30.769 0.00 0.00 0.00 3.51
3748 3995 7.276438 GCCTTGCGAGATTTTTCTAAAATTGAT 59.724 33.333 1.22 0.00 0.00 2.57
3749 3996 6.586082 GCCTTGCGAGATTTTTCTAAAATTGA 59.414 34.615 1.22 0.00 0.00 2.57
3768 4015 1.000896 ACACCTACATGGGCCTTGC 60.001 57.895 18.57 0.00 41.11 4.01
3769 4016 0.327924 TGACACCTACATGGGCCTTG 59.672 55.000 17.21 17.21 41.11 3.61
3770 4017 1.072266 TTGACACCTACATGGGCCTT 58.928 50.000 4.53 0.00 41.11 4.35
3771 4018 1.064463 CATTGACACCTACATGGGCCT 60.064 52.381 4.53 0.00 41.11 5.19
3785 4032 1.073923 ACCAGGTCCCTTGTCATTGAC 59.926 52.381 9.93 9.93 0.00 3.18
3789 4036 0.475632 TCCACCAGGTCCCTTGTCAT 60.476 55.000 0.00 0.00 35.89 3.06
3793 4040 0.251341 CCTTTCCACCAGGTCCCTTG 60.251 60.000 0.00 0.00 35.89 3.61
3800 4047 1.271926 CCACCTAACCTTTCCACCAGG 60.272 57.143 0.00 0.00 37.45 4.45
3801 4048 1.271926 CCCACCTAACCTTTCCACCAG 60.272 57.143 0.00 0.00 0.00 4.00
3804 4051 1.609841 CGTCCCACCTAACCTTTCCAC 60.610 57.143 0.00 0.00 0.00 4.02
3811 4058 1.004200 CACCACGTCCCACCTAACC 60.004 63.158 0.00 0.00 0.00 2.85
3812 4059 0.393820 TTCACCACGTCCCACCTAAC 59.606 55.000 0.00 0.00 0.00 2.34
3813 4060 1.129917 TTTCACCACGTCCCACCTAA 58.870 50.000 0.00 0.00 0.00 2.69
3814 4061 1.071071 CTTTTCACCACGTCCCACCTA 59.929 52.381 0.00 0.00 0.00 3.08
3815 4062 0.179029 CTTTTCACCACGTCCCACCT 60.179 55.000 0.00 0.00 0.00 4.00
3816 4063 0.179040 TCTTTTCACCACGTCCCACC 60.179 55.000 0.00 0.00 0.00 4.61
3817 4064 1.892209 ATCTTTTCACCACGTCCCAC 58.108 50.000 0.00 0.00 0.00 4.61
3818 4065 2.649531 AATCTTTTCACCACGTCCCA 57.350 45.000 0.00 0.00 0.00 4.37
3819 4066 3.007635 CCTAATCTTTTCACCACGTCCC 58.992 50.000 0.00 0.00 0.00 4.46
3820 4067 2.418976 GCCTAATCTTTTCACCACGTCC 59.581 50.000 0.00 0.00 0.00 4.79
3821 4068 3.335579 AGCCTAATCTTTTCACCACGTC 58.664 45.455 0.00 0.00 0.00 4.34
3822 4069 3.418684 AGCCTAATCTTTTCACCACGT 57.581 42.857 0.00 0.00 0.00 4.49
3823 4070 3.871594 CCTAGCCTAATCTTTTCACCACG 59.128 47.826 0.00 0.00 0.00 4.94
3824 4071 4.080526 TCCCTAGCCTAATCTTTTCACCAC 60.081 45.833 0.00 0.00 0.00 4.16
3825 4072 4.080526 GTCCCTAGCCTAATCTTTTCACCA 60.081 45.833 0.00 0.00 0.00 4.17
3826 4073 4.452825 GTCCCTAGCCTAATCTTTTCACC 58.547 47.826 0.00 0.00 0.00 4.02
3827 4074 4.164413 AGGTCCCTAGCCTAATCTTTTCAC 59.836 45.833 0.00 0.00 33.97 3.18
3828 4075 4.371681 AGGTCCCTAGCCTAATCTTTTCA 58.628 43.478 0.00 0.00 33.97 2.69
3829 4076 4.202377 GGAGGTCCCTAGCCTAATCTTTTC 60.202 50.000 0.00 0.00 36.29 2.29
3830 4077 3.717392 GGAGGTCCCTAGCCTAATCTTTT 59.283 47.826 0.00 0.00 36.29 2.27
3831 4078 3.050954 AGGAGGTCCCTAGCCTAATCTTT 60.051 47.826 0.00 0.00 45.48 2.52
3832 4079 2.524875 AGGAGGTCCCTAGCCTAATCTT 59.475 50.000 0.00 0.00 45.48 2.40
3833 4080 2.157289 AGGAGGTCCCTAGCCTAATCT 58.843 52.381 0.00 0.00 45.48 2.40
3834 4081 2.252714 CAGGAGGTCCCTAGCCTAATC 58.747 57.143 0.00 0.00 45.60 1.75
3835 4082 1.581149 ACAGGAGGTCCCTAGCCTAAT 59.419 52.381 0.00 0.00 45.60 1.73
3836 4083 1.016415 ACAGGAGGTCCCTAGCCTAA 58.984 55.000 0.00 0.00 45.60 2.69
3837 4084 0.261991 CACAGGAGGTCCCTAGCCTA 59.738 60.000 0.00 0.00 45.60 3.93
3838 4085 1.002274 CACAGGAGGTCCCTAGCCT 59.998 63.158 0.00 0.00 45.60 4.58
3839 4086 0.910088 AACACAGGAGGTCCCTAGCC 60.910 60.000 0.00 0.00 45.60 3.93
3840 4087 0.984995 AAACACAGGAGGTCCCTAGC 59.015 55.000 0.00 0.00 45.60 3.42
3841 4088 4.770795 CAATAAACACAGGAGGTCCCTAG 58.229 47.826 0.00 0.00 45.60 3.02
3842 4089 3.054655 GCAATAAACACAGGAGGTCCCTA 60.055 47.826 0.00 0.00 45.60 3.53
3844 4091 2.092323 GCAATAAACACAGGAGGTCCC 58.908 52.381 0.00 0.00 36.42 4.46
3845 4092 1.737793 CGCAATAAACACAGGAGGTCC 59.262 52.381 0.00 0.00 0.00 4.46
3846 4093 2.695359 TCGCAATAAACACAGGAGGTC 58.305 47.619 0.00 0.00 0.00 3.85
3847 4094 2.851263 TCGCAATAAACACAGGAGGT 57.149 45.000 0.00 0.00 0.00 3.85
3848 4095 4.475944 CTTTTCGCAATAAACACAGGAGG 58.524 43.478 0.00 0.00 0.00 4.30
3849 4096 4.215399 TCCTTTTCGCAATAAACACAGGAG 59.785 41.667 0.00 0.00 0.00 3.69
3850 4097 4.138290 TCCTTTTCGCAATAAACACAGGA 58.862 39.130 0.00 0.00 0.00 3.86
3851 4098 4.023193 ACTCCTTTTCGCAATAAACACAGG 60.023 41.667 0.00 0.00 0.00 4.00
3852 4099 5.108385 ACTCCTTTTCGCAATAAACACAG 57.892 39.130 0.00 0.00 0.00 3.66
3853 4100 4.319190 CGACTCCTTTTCGCAATAAACACA 60.319 41.667 0.00 0.00 0.00 3.72
3854 4101 4.148891 CGACTCCTTTTCGCAATAAACAC 58.851 43.478 0.00 0.00 0.00 3.32
3855 4102 4.398549 CGACTCCTTTTCGCAATAAACA 57.601 40.909 0.00 0.00 0.00 2.83
3864 4111 0.163146 GAAACCGCGACTCCTTTTCG 59.837 55.000 8.23 0.00 39.56 3.46
3865 4112 0.163146 CGAAACCGCGACTCCTTTTC 59.837 55.000 8.23 5.53 0.00 2.29
3866 4113 1.838568 GCGAAACCGCGACTCCTTTT 61.839 55.000 8.23 0.00 43.47 2.27
3867 4114 2.315386 GCGAAACCGCGACTCCTTT 61.315 57.895 8.23 0.00 43.47 3.11
3868 4115 2.737376 GCGAAACCGCGACTCCTT 60.737 61.111 8.23 0.00 43.47 3.36
3877 4124 3.423154 GCCTCCTGTGCGAAACCG 61.423 66.667 0.00 0.00 0.00 4.44
3885 4132 4.767255 GGTGAGCCGCCTCCTGTG 62.767 72.222 0.00 0.00 37.29 3.66
3887 4134 3.710722 AAGGTGAGCCGCCTCCTG 61.711 66.667 7.62 0.00 44.35 3.86
3888 4135 3.710722 CAAGGTGAGCCGCCTCCT 61.711 66.667 7.62 0.00 44.35 3.69
3889 4136 4.785453 CCAAGGTGAGCCGCCTCC 62.785 72.222 7.62 0.00 44.35 4.30
3909 4156 0.740737 CAAAAGACATCGGATGGGCC 59.259 55.000 21.19 10.29 33.60 5.80
3910 4157 0.101219 GCAAAAGACATCGGATGGGC 59.899 55.000 21.19 12.80 33.60 5.36
3911 4158 1.462616 TGCAAAAGACATCGGATGGG 58.537 50.000 21.19 5.55 33.60 4.00
3912 4159 3.574284 TTTGCAAAAGACATCGGATGG 57.426 42.857 21.19 4.37 33.60 3.51
3913 4160 4.735985 TCATTTGCAAAAGACATCGGATG 58.264 39.130 17.19 16.20 0.00 3.51
3914 4161 5.389859 TTCATTTGCAAAAGACATCGGAT 57.610 34.783 17.19 0.00 0.00 4.18
3915 4162 4.844998 TTCATTTGCAAAAGACATCGGA 57.155 36.364 17.19 0.00 0.00 4.55
3916 4163 4.984161 AGTTTCATTTGCAAAAGACATCGG 59.016 37.500 17.19 0.00 0.00 4.18
3917 4164 6.515043 AAGTTTCATTTGCAAAAGACATCG 57.485 33.333 17.19 0.00 0.00 3.84
3918 4165 6.575132 CGAAGTTTCATTTGCAAAAGACATC 58.425 36.000 17.19 12.66 0.00 3.06
3919 4166 5.050837 GCGAAGTTTCATTTGCAAAAGACAT 60.051 36.000 17.19 5.61 39.08 3.06
3920 4167 4.267452 GCGAAGTTTCATTTGCAAAAGACA 59.733 37.500 17.19 7.61 39.08 3.41
3921 4168 4.267452 TGCGAAGTTTCATTTGCAAAAGAC 59.733 37.500 17.19 11.87 44.64 3.01
3922 4169 4.428209 TGCGAAGTTTCATTTGCAAAAGA 58.572 34.783 17.19 14.84 44.64 2.52
3923 4170 4.775440 TGCGAAGTTTCATTTGCAAAAG 57.225 36.364 17.19 12.39 44.64 2.27
3927 4174 5.731599 ATTTTTGCGAAGTTTCATTTGCA 57.268 30.435 0.00 0.00 45.66 4.08
3928 4175 7.104326 TCTATTTTTGCGAAGTTTCATTTGC 57.896 32.000 0.00 0.00 39.60 3.68
3929 4176 7.096106 TGCTCTATTTTTGCGAAGTTTCATTTG 60.096 33.333 0.00 0.00 0.00 2.32
3930 4177 6.922957 TGCTCTATTTTTGCGAAGTTTCATTT 59.077 30.769 0.00 0.00 0.00 2.32
3931 4178 6.363357 GTGCTCTATTTTTGCGAAGTTTCATT 59.637 34.615 0.00 0.00 0.00 2.57
3932 4179 5.858581 GTGCTCTATTTTTGCGAAGTTTCAT 59.141 36.000 0.00 0.00 0.00 2.57
3933 4180 5.212194 GTGCTCTATTTTTGCGAAGTTTCA 58.788 37.500 0.00 0.00 0.00 2.69
3934 4181 5.115622 GTGTGCTCTATTTTTGCGAAGTTTC 59.884 40.000 0.00 0.00 0.00 2.78
3935 4182 4.976116 GTGTGCTCTATTTTTGCGAAGTTT 59.024 37.500 0.00 0.00 0.00 2.66
3936 4183 4.275936 AGTGTGCTCTATTTTTGCGAAGTT 59.724 37.500 0.00 0.00 0.00 2.66
3937 4184 3.815401 AGTGTGCTCTATTTTTGCGAAGT 59.185 39.130 0.00 0.00 0.00 3.01
3938 4185 4.398247 GAGTGTGCTCTATTTTTGCGAAG 58.602 43.478 0.00 0.00 38.66 3.79
3939 4186 4.404507 GAGTGTGCTCTATTTTTGCGAA 57.595 40.909 0.00 0.00 38.66 4.70
3951 4198 4.047822 GTGCATATCTGTAGAGTGTGCTC 58.952 47.826 13.40 8.66 41.94 4.26
3952 4199 3.489908 CGTGCATATCTGTAGAGTGTGCT 60.490 47.826 13.40 0.00 33.59 4.40
3953 4200 2.791560 CGTGCATATCTGTAGAGTGTGC 59.208 50.000 0.00 8.22 33.27 4.57
3954 4201 3.793492 CACGTGCATATCTGTAGAGTGTG 59.207 47.826 0.82 0.00 0.00 3.82
3955 4202 3.735208 GCACGTGCATATCTGTAGAGTGT 60.735 47.826 34.52 0.00 41.59 3.55
3956 4203 2.791560 GCACGTGCATATCTGTAGAGTG 59.208 50.000 34.52 0.00 41.59 3.51
3957 4204 2.690497 AGCACGTGCATATCTGTAGAGT 59.310 45.455 39.21 13.65 45.16 3.24
3958 4205 3.048501 CAGCACGTGCATATCTGTAGAG 58.951 50.000 39.21 11.85 45.16 2.43
3959 4206 3.084070 CAGCACGTGCATATCTGTAGA 57.916 47.619 39.21 0.00 45.16 2.59
3981 4228 3.432051 ATGAGTCGCGGTGGCTAGC 62.432 63.158 6.04 6.04 36.88 3.42
3982 4229 1.589993 CATGAGTCGCGGTGGCTAG 60.590 63.158 6.13 0.00 36.88 3.42
3983 4230 2.004808 CTCATGAGTCGCGGTGGCTA 62.005 60.000 14.95 0.00 36.88 3.93
3984 4231 3.362399 CTCATGAGTCGCGGTGGCT 62.362 63.158 14.95 0.00 36.88 4.75
3985 4232 2.887568 CTCATGAGTCGCGGTGGC 60.888 66.667 14.95 0.00 0.00 5.01
3986 4233 2.004808 TAGCTCATGAGTCGCGGTGG 62.005 60.000 23.38 0.00 0.00 4.61
3987 4234 0.593518 CTAGCTCATGAGTCGCGGTG 60.594 60.000 23.38 4.48 0.00 4.94
3988 4235 1.730487 CTAGCTCATGAGTCGCGGT 59.270 57.895 23.38 6.71 0.00 5.68
3989 4236 1.659954 GCTAGCTCATGAGTCGCGG 60.660 63.158 23.38 10.77 0.00 6.46
3990 4237 1.659954 GGCTAGCTCATGAGTCGCG 60.660 63.158 23.38 0.00 0.00 5.87
3991 4238 0.318614 GAGGCTAGCTCATGAGTCGC 60.319 60.000 23.38 20.57 0.00 5.19
3992 4239 0.040514 CGAGGCTAGCTCATGAGTCG 60.041 60.000 23.38 18.40 0.00 4.18
3993 4240 1.028905 ACGAGGCTAGCTCATGAGTC 58.971 55.000 23.38 15.41 0.00 3.36
3994 4241 0.743688 CACGAGGCTAGCTCATGAGT 59.256 55.000 23.38 12.80 0.00 3.41
3995 4242 1.001487 CTCACGAGGCTAGCTCATGAG 60.001 57.143 18.84 18.84 0.00 2.90
3996 4243 1.028130 CTCACGAGGCTAGCTCATGA 58.972 55.000 15.72 12.71 0.00 3.07
3997 4244 0.597118 GCTCACGAGGCTAGCTCATG 60.597 60.000 15.72 9.07 33.40 3.07
3998 4245 0.754957 AGCTCACGAGGCTAGCTCAT 60.755 55.000 15.72 0.51 42.89 2.90
3999 4246 0.107165 TAGCTCACGAGGCTAGCTCA 60.107 55.000 15.72 0.00 42.89 4.26
4000 4247 1.243902 ATAGCTCACGAGGCTAGCTC 58.756 55.000 15.72 9.21 42.89 4.09
4002 4249 2.517650 AAATAGCTCACGAGGCTAGC 57.482 50.000 6.04 6.04 44.05 3.42
4003 4250 4.046938 TCAAAATAGCTCACGAGGCTAG 57.953 45.455 0.00 0.00 44.05 3.42
4004 4251 4.465632 TTCAAAATAGCTCACGAGGCTA 57.534 40.909 0.00 10.00 44.76 3.93
4005 4252 3.334583 TTCAAAATAGCTCACGAGGCT 57.665 42.857 0.00 0.00 43.02 4.58
4006 4253 4.622701 ATTTCAAAATAGCTCACGAGGC 57.377 40.909 0.00 0.00 0.00 4.70
4007 4254 8.184192 ACAAATATTTCAAAATAGCTCACGAGG 58.816 33.333 0.00 0.00 34.62 4.63
4010 4257 8.947940 GCTACAAATATTTCAAAATAGCTCACG 58.052 33.333 0.00 0.00 34.62 4.35
4011 4258 9.787532 TGCTACAAATATTTCAAAATAGCTCAC 57.212 29.630 17.27 0.00 34.62 3.51
4014 4261 9.669353 CGATGCTACAAATATTTCAAAATAGCT 57.331 29.630 17.27 0.00 34.62 3.32
4015 4262 9.663904 TCGATGCTACAAATATTTCAAAATAGC 57.336 29.630 0.00 7.60 34.62 2.97
4019 4266 9.853555 AACATCGATGCTACAAATATTTCAAAA 57.146 25.926 25.11 0.00 0.00 2.44
4022 4269 9.541143 TCTAACATCGATGCTACAAATATTTCA 57.459 29.630 25.11 0.00 0.00 2.69
4026 4273 9.547753 AGTTTCTAACATCGATGCTACAAATAT 57.452 29.630 25.11 8.00 0.00 1.28
4027 4274 8.817100 CAGTTTCTAACATCGATGCTACAAATA 58.183 33.333 25.11 6.50 0.00 1.40
4028 4275 7.677276 GCAGTTTCTAACATCGATGCTACAAAT 60.677 37.037 25.11 8.44 0.00 2.32
4029 4276 6.402118 GCAGTTTCTAACATCGATGCTACAAA 60.402 38.462 25.11 14.13 0.00 2.83
4030 4277 5.063438 GCAGTTTCTAACATCGATGCTACAA 59.937 40.000 25.11 8.76 0.00 2.41
4031 4278 4.566759 GCAGTTTCTAACATCGATGCTACA 59.433 41.667 25.11 2.30 0.00 2.74
4032 4279 4.025647 GGCAGTTTCTAACATCGATGCTAC 60.026 45.833 25.11 13.16 30.87 3.58
4033 4280 4.119862 GGCAGTTTCTAACATCGATGCTA 58.880 43.478 25.11 16.28 30.87 3.49
4034 4281 2.939103 GGCAGTTTCTAACATCGATGCT 59.061 45.455 25.11 15.99 30.87 3.79
4035 4282 2.285834 CGGCAGTTTCTAACATCGATGC 60.286 50.000 25.11 8.53 0.00 3.91
4036 4283 2.930040 ACGGCAGTTTCTAACATCGATG 59.070 45.455 23.68 23.68 0.00 3.84
4037 4284 3.247006 ACGGCAGTTTCTAACATCGAT 57.753 42.857 0.00 0.00 0.00 3.59
4038 4285 2.736144 ACGGCAGTTTCTAACATCGA 57.264 45.000 0.00 0.00 0.00 3.59
4039 4286 3.303495 CACTACGGCAGTTTCTAACATCG 59.697 47.826 0.00 0.00 34.26 3.84
4040 4287 3.617263 CCACTACGGCAGTTTCTAACATC 59.383 47.826 0.00 0.00 34.26 3.06
4041 4288 3.596214 CCACTACGGCAGTTTCTAACAT 58.404 45.455 0.00 0.00 34.26 2.71
4042 4289 3.034721 CCACTACGGCAGTTTCTAACA 57.965 47.619 0.00 0.00 34.26 2.41
4065 4312 0.385390 CACGAGCTGGCCTTGTTTTT 59.615 50.000 3.32 0.00 35.96 1.94
4066 4313 0.465460 TCACGAGCTGGCCTTGTTTT 60.465 50.000 3.32 0.00 35.96 2.43
4067 4314 0.465460 TTCACGAGCTGGCCTTGTTT 60.465 50.000 3.32 0.00 35.96 2.83
4068 4315 0.465460 TTTCACGAGCTGGCCTTGTT 60.465 50.000 3.32 0.00 35.96 2.83
4069 4316 0.465460 TTTTCACGAGCTGGCCTTGT 60.465 50.000 3.32 0.00 38.79 3.16
4070 4317 0.883833 ATTTTCACGAGCTGGCCTTG 59.116 50.000 3.32 0.00 0.00 3.61
4071 4318 1.541588 GAATTTTCACGAGCTGGCCTT 59.458 47.619 3.32 0.00 0.00 4.35
4072 4319 1.168714 GAATTTTCACGAGCTGGCCT 58.831 50.000 3.32 0.00 0.00 5.19
4073 4320 0.171231 GGAATTTTCACGAGCTGGCC 59.829 55.000 0.00 0.00 0.00 5.36
4074 4321 0.881118 TGGAATTTTCACGAGCTGGC 59.119 50.000 0.00 0.00 0.00 4.85
4075 4322 4.963276 TTATGGAATTTTCACGAGCTGG 57.037 40.909 0.00 0.00 0.00 4.85
4076 4323 6.381801 AGTTTTATGGAATTTTCACGAGCTG 58.618 36.000 0.00 0.00 0.00 4.24
4077 4324 6.575162 AGTTTTATGGAATTTTCACGAGCT 57.425 33.333 0.00 0.00 0.00 4.09
4078 4325 6.640907 ACAAGTTTTATGGAATTTTCACGAGC 59.359 34.615 0.00 0.00 0.00 5.03
4079 4326 7.114811 CCACAAGTTTTATGGAATTTTCACGAG 59.885 37.037 0.00 0.00 35.33 4.18
4080 4327 6.920758 CCACAAGTTTTATGGAATTTTCACGA 59.079 34.615 0.00 0.00 35.33 4.35
4081 4328 6.145371 CCCACAAGTTTTATGGAATTTTCACG 59.855 38.462 0.00 0.00 35.33 4.35
4082 4329 7.213678 TCCCACAAGTTTTATGGAATTTTCAC 58.786 34.615 0.00 0.00 35.33 3.18
4083 4330 7.288852 TCTCCCACAAGTTTTATGGAATTTTCA 59.711 33.333 0.00 0.00 35.33 2.69
4084 4331 7.666623 TCTCCCACAAGTTTTATGGAATTTTC 58.333 34.615 0.00 0.00 35.33 2.29
4085 4332 7.256296 CCTCTCCCACAAGTTTTATGGAATTTT 60.256 37.037 0.00 0.00 35.33 1.82
4086 4333 6.211384 CCTCTCCCACAAGTTTTATGGAATTT 59.789 38.462 0.00 0.00 35.33 1.82
4087 4334 5.716703 CCTCTCCCACAAGTTTTATGGAATT 59.283 40.000 0.00 0.00 35.33 2.17
4088 4335 5.264395 CCTCTCCCACAAGTTTTATGGAAT 58.736 41.667 0.00 0.00 35.33 3.01
4089 4336 4.508405 CCCTCTCCCACAAGTTTTATGGAA 60.508 45.833 0.00 0.00 35.33 3.53
4090 4337 3.010138 CCCTCTCCCACAAGTTTTATGGA 59.990 47.826 0.00 0.00 35.33 3.41
4091 4338 3.010138 TCCCTCTCCCACAAGTTTTATGG 59.990 47.826 0.00 0.00 0.00 2.74
4092 4339 4.301072 TCCCTCTCCCACAAGTTTTATG 57.699 45.455 0.00 0.00 0.00 1.90
4093 4340 5.015178 TCAATCCCTCTCCCACAAGTTTTAT 59.985 40.000 0.00 0.00 0.00 1.40
4094 4341 4.352595 TCAATCCCTCTCCCACAAGTTTTA 59.647 41.667 0.00 0.00 0.00 1.52
4095 4342 3.140144 TCAATCCCTCTCCCACAAGTTTT 59.860 43.478 0.00 0.00 0.00 2.43
4096 4343 2.716424 TCAATCCCTCTCCCACAAGTTT 59.284 45.455 0.00 0.00 0.00 2.66
4097 4344 2.348472 TCAATCCCTCTCCCACAAGTT 58.652 47.619 0.00 0.00 0.00 2.66
4098 4345 2.040412 GTTCAATCCCTCTCCCACAAGT 59.960 50.000 0.00 0.00 0.00 3.16
4099 4346 2.040278 TGTTCAATCCCTCTCCCACAAG 59.960 50.000 0.00 0.00 0.00 3.16
4100 4347 2.061848 TGTTCAATCCCTCTCCCACAA 58.938 47.619 0.00 0.00 0.00 3.33
4101 4348 1.351017 GTGTTCAATCCCTCTCCCACA 59.649 52.381 0.00 0.00 0.00 4.17
4102 4349 1.351017 TGTGTTCAATCCCTCTCCCAC 59.649 52.381 0.00 0.00 0.00 4.61
4103 4350 1.741028 TGTGTTCAATCCCTCTCCCA 58.259 50.000 0.00 0.00 0.00 4.37
4104 4351 2.040412 ACTTGTGTTCAATCCCTCTCCC 59.960 50.000 0.00 0.00 32.82 4.30
4105 4352 3.339141 GACTTGTGTTCAATCCCTCTCC 58.661 50.000 0.00 0.00 32.82 3.71
4106 4353 3.008485 AGGACTTGTGTTCAATCCCTCTC 59.992 47.826 0.00 0.00 33.29 3.20
4107 4354 2.982488 AGGACTTGTGTTCAATCCCTCT 59.018 45.455 0.00 0.00 33.29 3.69
4108 4355 3.339141 GAGGACTTGTGTTCAATCCCTC 58.661 50.000 0.00 0.00 40.80 4.30
4109 4356 2.040412 GGAGGACTTGTGTTCAATCCCT 59.960 50.000 0.00 0.00 37.69 4.20
4110 4357 2.437413 GGAGGACTTGTGTTCAATCCC 58.563 52.381 0.00 0.00 32.82 3.85
4111 4358 2.224769 TGGGAGGACTTGTGTTCAATCC 60.225 50.000 0.00 0.00 31.75 3.01
4112 4359 2.814336 GTGGGAGGACTTGTGTTCAATC 59.186 50.000 0.00 0.00 32.82 2.67
4113 4360 2.489073 GGTGGGAGGACTTGTGTTCAAT 60.489 50.000 0.00 0.00 32.82 2.57
4114 4361 1.133915 GGTGGGAGGACTTGTGTTCAA 60.134 52.381 0.00 0.00 0.00 2.69
4115 4362 0.472471 GGTGGGAGGACTTGTGTTCA 59.528 55.000 0.00 0.00 0.00 3.18
4116 4363 0.472471 TGGTGGGAGGACTTGTGTTC 59.528 55.000 0.00 0.00 0.00 3.18
4117 4364 0.474184 CTGGTGGGAGGACTTGTGTT 59.526 55.000 0.00 0.00 0.00 3.32
4118 4365 0.399949 TCTGGTGGGAGGACTTGTGT 60.400 55.000 0.00 0.00 0.00 3.72
4119 4366 0.322975 CTCTGGTGGGAGGACTTGTG 59.677 60.000 0.00 0.00 0.00 3.33
4120 4367 0.191064 TCTCTGGTGGGAGGACTTGT 59.809 55.000 0.00 0.00 34.39 3.16
4121 4368 1.277557 CTTCTCTGGTGGGAGGACTTG 59.722 57.143 0.00 0.00 34.39 3.16
4122 4369 1.132689 ACTTCTCTGGTGGGAGGACTT 60.133 52.381 0.00 0.00 34.39 3.01
4123 4370 0.489567 ACTTCTCTGGTGGGAGGACT 59.510 55.000 0.00 0.00 34.39 3.85
4124 4371 0.610687 CACTTCTCTGGTGGGAGGAC 59.389 60.000 0.00 0.00 34.39 3.85
4125 4372 1.194781 GCACTTCTCTGGTGGGAGGA 61.195 60.000 0.00 0.00 35.47 3.71
4126 4373 1.298014 GCACTTCTCTGGTGGGAGG 59.702 63.158 0.00 0.00 35.47 4.30
4127 4374 0.617413 ATGCACTTCTCTGGTGGGAG 59.383 55.000 0.00 0.00 35.47 4.30
4128 4375 1.555075 GTATGCACTTCTCTGGTGGGA 59.445 52.381 0.00 0.00 35.47 4.37
4129 4376 1.278985 TGTATGCACTTCTCTGGTGGG 59.721 52.381 0.00 0.00 35.47 4.61
4130 4377 2.768253 TGTATGCACTTCTCTGGTGG 57.232 50.000 0.00 0.00 35.47 4.61
4131 4378 3.806521 GCTATGTATGCACTTCTCTGGTG 59.193 47.826 0.00 0.00 37.70 4.17
4132 4379 3.181461 GGCTATGTATGCACTTCTCTGGT 60.181 47.826 0.00 0.00 0.00 4.00
4133 4380 3.181462 TGGCTATGTATGCACTTCTCTGG 60.181 47.826 0.00 0.00 0.00 3.86
4134 4381 3.806521 GTGGCTATGTATGCACTTCTCTG 59.193 47.826 0.00 0.00 0.00 3.35
4135 4382 3.708631 AGTGGCTATGTATGCACTTCTCT 59.291 43.478 0.00 0.00 0.00 3.10
4136 4383 4.065321 AGTGGCTATGTATGCACTTCTC 57.935 45.455 0.00 0.00 0.00 2.87
4137 4384 5.815233 ATAGTGGCTATGTATGCACTTCT 57.185 39.130 0.00 0.00 0.00 2.85
4138 4385 9.088512 GTATTATAGTGGCTATGTATGCACTTC 57.911 37.037 0.00 0.00 0.00 3.01
4139 4386 7.759886 CGTATTATAGTGGCTATGTATGCACTT 59.240 37.037 0.00 0.00 0.00 3.16
4140 4387 7.258441 CGTATTATAGTGGCTATGTATGCACT 58.742 38.462 0.00 0.00 0.00 4.40
4141 4388 6.019801 GCGTATTATAGTGGCTATGTATGCAC 60.020 42.308 15.05 0.00 34.64 4.57
4142 4389 6.040247 GCGTATTATAGTGGCTATGTATGCA 58.960 40.000 15.05 0.00 34.64 3.96
4143 4390 5.173312 CGCGTATTATAGTGGCTATGTATGC 59.827 44.000 0.00 12.45 33.14 3.14
4144 4391 5.685954 CCGCGTATTATAGTGGCTATGTATG 59.314 44.000 4.92 0.75 0.00 2.39
4145 4392 5.828747 CCGCGTATTATAGTGGCTATGTAT 58.171 41.667 4.92 0.00 0.00 2.29
4146 4393 5.239359 CCGCGTATTATAGTGGCTATGTA 57.761 43.478 4.92 0.00 0.00 2.29
4147 4394 4.106029 CCGCGTATTATAGTGGCTATGT 57.894 45.455 4.92 0.00 0.00 2.29
4153 4400 2.717580 TCTGCCGCGTATTATAGTGG 57.282 50.000 4.92 0.00 40.75 4.00
4154 4401 5.637809 TCTAATCTGCCGCGTATTATAGTG 58.362 41.667 4.92 0.00 0.00 2.74
4155 4402 5.892160 TCTAATCTGCCGCGTATTATAGT 57.108 39.130 4.92 0.00 0.00 2.12
4156 4403 7.757097 AAATCTAATCTGCCGCGTATTATAG 57.243 36.000 4.92 0.56 0.00 1.31
4157 4404 8.542497 AAAAATCTAATCTGCCGCGTATTATA 57.458 30.769 4.92 0.00 0.00 0.98
4158 4405 7.435068 AAAAATCTAATCTGCCGCGTATTAT 57.565 32.000 4.92 0.00 0.00 1.28
4159 4406 6.854496 AAAAATCTAATCTGCCGCGTATTA 57.146 33.333 4.92 3.04 0.00 0.98
4160 4407 5.751243 AAAAATCTAATCTGCCGCGTATT 57.249 34.783 4.92 1.91 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.