Multiple sequence alignment - TraesCS3B01G434400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G434400 | chr3B | 100.000 | 3446 | 0 | 0 | 1 | 3446 | 672854458 | 672851013 | 0.000000e+00 | 6364.0 |
1 | TraesCS3B01G434400 | chr3B | 100.000 | 113 | 0 | 0 | 3792 | 3904 | 672850667 | 672850555 | 3.950000e-50 | 209.0 |
2 | TraesCS3B01G434400 | chr3B | 84.615 | 104 | 16 | 0 | 3800 | 3903 | 119478394 | 119478291 | 1.920000e-18 | 104.0 |
3 | TraesCS3B01G434400 | chr3D | 91.609 | 3015 | 154 | 43 | 1 | 2960 | 511333552 | 511330582 | 0.000000e+00 | 4074.0 |
4 | TraesCS3B01G434400 | chr3D | 94.595 | 37 | 2 | 0 | 3350 | 3386 | 395005958 | 395005994 | 1.520000e-04 | 58.4 |
5 | TraesCS3B01G434400 | chr3A | 90.593 | 1839 | 112 | 29 | 630 | 2424 | 647465713 | 647463892 | 0.000000e+00 | 2381.0 |
6 | TraesCS3B01G434400 | chr3A | 86.269 | 772 | 68 | 17 | 2469 | 3221 | 647463888 | 647463136 | 0.000000e+00 | 804.0 |
7 | TraesCS3B01G434400 | chr3A | 90.212 | 378 | 19 | 4 | 262 | 628 | 647466169 | 647465799 | 9.810000e-131 | 477.0 |
8 | TraesCS3B01G434400 | chr3A | 86.916 | 214 | 21 | 1 | 1 | 214 | 647467640 | 647467434 | 2.350000e-57 | 233.0 |
9 | TraesCS3B01G434400 | chr3A | 88.776 | 98 | 10 | 1 | 3252 | 3349 | 647463134 | 647463038 | 6.850000e-23 | 119.0 |
10 | TraesCS3B01G434400 | chr3A | 83.810 | 105 | 17 | 0 | 3800 | 3904 | 87704087 | 87703983 | 2.480000e-17 | 100.0 |
11 | TraesCS3B01G434400 | chr7D | 86.139 | 101 | 13 | 1 | 3800 | 3899 | 364412831 | 364412731 | 1.480000e-19 | 108.0 |
12 | TraesCS3B01G434400 | chr7D | 85.897 | 78 | 7 | 4 | 3792 | 3868 | 269696655 | 269696581 | 3.230000e-11 | 80.5 |
13 | TraesCS3B01G434400 | chr6D | 82.609 | 115 | 12 | 5 | 3794 | 3904 | 269881786 | 269881676 | 1.150000e-15 | 95.3 |
14 | TraesCS3B01G434400 | chr6D | 80.952 | 105 | 18 | 2 | 3800 | 3904 | 312920771 | 312920669 | 8.990000e-12 | 82.4 |
15 | TraesCS3B01G434400 | chr7B | 81.579 | 114 | 17 | 4 | 3792 | 3904 | 271070348 | 271070238 | 1.490000e-14 | 91.6 |
16 | TraesCS3B01G434400 | chr7B | 100.000 | 35 | 0 | 0 | 627 | 661 | 98980890 | 98980924 | 9.050000e-07 | 65.8 |
17 | TraesCS3B01G434400 | chr6B | 83.908 | 87 | 12 | 2 | 3794 | 3880 | 513683738 | 513683822 | 8.990000e-12 | 82.4 |
18 | TraesCS3B01G434400 | chr1D | 80.556 | 108 | 19 | 1 | 3797 | 3904 | 425542069 | 425541964 | 8.990000e-12 | 82.4 |
19 | TraesCS3B01G434400 | chr2B | 97.222 | 36 | 1 | 0 | 628 | 663 | 654658110 | 654658075 | 1.170000e-05 | 62.1 |
20 | TraesCS3B01G434400 | chr2B | 97.222 | 36 | 1 | 0 | 628 | 663 | 654708216 | 654708181 | 1.170000e-05 | 62.1 |
21 | TraesCS3B01G434400 | chr2B | 97.222 | 36 | 1 | 0 | 628 | 663 | 654737142 | 654737107 | 1.170000e-05 | 62.1 |
22 | TraesCS3B01G434400 | chr2B | 100.000 | 29 | 0 | 0 | 1818 | 1846 | 608541022 | 608541050 | 2.000000e-03 | 54.7 |
23 | TraesCS3B01G434400 | chr2A | 94.444 | 36 | 2 | 0 | 1818 | 1853 | 661082862 | 661082897 | 5.450000e-04 | 56.5 |
24 | TraesCS3B01G434400 | chr2D | 100.000 | 29 | 0 | 0 | 1818 | 1846 | 516863424 | 516863452 | 2.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G434400 | chr3B | 672850555 | 672854458 | 3903 | True | 3286.5 | 6364 | 100.0000 | 1 | 3904 | 2 | chr3B.!!$R2 | 3903 |
1 | TraesCS3B01G434400 | chr3D | 511330582 | 511333552 | 2970 | True | 4074.0 | 4074 | 91.6090 | 1 | 2960 | 1 | chr3D.!!$R1 | 2959 |
2 | TraesCS3B01G434400 | chr3A | 647463038 | 647467640 | 4602 | True | 802.8 | 2381 | 88.5532 | 1 | 3349 | 5 | chr3A.!!$R2 | 3348 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
517 | 1763 | 0.458669 | GTCGCGGGATCCTCAAACTA | 59.541 | 55.000 | 12.58 | 0.00 | 0.00 | 2.24 | F |
824 | 2162 | 0.725784 | GAACTCACCAAACGCATGCG | 60.726 | 55.000 | 36.79 | 36.79 | 46.03 | 4.73 | F |
939 | 2287 | 1.471287 | CACTGCTTGATCACCATGTGG | 59.529 | 52.381 | 0.00 | 0.00 | 42.17 | 4.17 | F |
1687 | 3044 | 0.033504 | AGTCTTGACGTGGCATTCGT | 59.966 | 50.000 | 2.55 | 2.55 | 44.27 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1668 | 3025 | 0.033504 | ACGAATGCCACGTCAAGACT | 59.966 | 50.0 | 0.00 | 0.00 | 39.87 | 3.24 | R |
1669 | 3026 | 0.163788 | CACGAATGCCACGTCAAGAC | 59.836 | 55.0 | 0.00 | 0.00 | 42.07 | 3.01 | R |
2295 | 3667 | 0.594796 | GTCGCTGCACCCAACTTTTG | 60.595 | 55.0 | 0.00 | 0.00 | 0.00 | 2.44 | R |
3222 | 4628 | 0.250234 | TGATTTCACTCTCCTGCGGG | 59.750 | 55.0 | 4.71 | 4.71 | 0.00 | 6.13 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
82 | 84 | 3.073650 | AGGAGTCAAATTTGCTCTCCAGT | 59.926 | 43.478 | 35.48 | 25.07 | 43.99 | 4.00 |
123 | 125 | 4.411540 | AGTCTATGGACCTCGGACTACTAA | 59.588 | 45.833 | 5.47 | 0.00 | 43.05 | 2.24 |
188 | 190 | 1.733360 | GCGTTTCACCGGCTGTTAATA | 59.267 | 47.619 | 0.00 | 0.00 | 0.00 | 0.98 |
230 | 922 | 2.032528 | CCCGCTCCACTCAAGCAA | 59.967 | 61.111 | 0.00 | 0.00 | 39.81 | 3.91 |
261 | 1488 | 1.216990 | CCTTCCTTAGGTCATGGGCT | 58.783 | 55.000 | 0.00 | 0.00 | 39.39 | 5.19 |
263 | 1490 | 1.839994 | CTTCCTTAGGTCATGGGCTCA | 59.160 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
264 | 1491 | 2.196742 | TCCTTAGGTCATGGGCTCAT | 57.803 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
265 | 1492 | 6.802361 | CCTTCCTTAGGTCATGGGCTCATG | 62.802 | 54.167 | 21.16 | 21.16 | 42.39 | 3.07 |
292 | 1520 | 4.202151 | GCTTTCTGGTGGTCAAAAGATTGT | 60.202 | 41.667 | 0.00 | 0.00 | 37.79 | 2.71 |
418 | 1664 | 2.032675 | GCAGCCATAGAAGTTGCTAAGC | 59.967 | 50.000 | 0.00 | 0.00 | 31.69 | 3.09 |
517 | 1763 | 0.458669 | GTCGCGGGATCCTCAAACTA | 59.541 | 55.000 | 12.58 | 0.00 | 0.00 | 2.24 |
606 | 1857 | 9.209175 | GTACTAAGCTCAGGTCAATTAATATGG | 57.791 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
778 | 2116 | 3.689161 | AGCTAGCACACGCATGAAATTTA | 59.311 | 39.130 | 18.83 | 0.00 | 42.27 | 1.40 |
783 | 2121 | 3.919804 | GCACACGCATGAAATTTACATGT | 59.080 | 39.130 | 21.30 | 2.69 | 44.52 | 3.21 |
824 | 2162 | 0.725784 | GAACTCACCAAACGCATGCG | 60.726 | 55.000 | 36.79 | 36.79 | 46.03 | 4.73 |
846 | 2184 | 8.312896 | TGCGTTTTAGAAAGTGTTATCATACA | 57.687 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
915 | 2253 | 2.103263 | GCTGGTCTCCAATGGTAGGTAG | 59.897 | 54.545 | 0.00 | 0.00 | 30.80 | 3.18 |
920 | 2258 | 4.284178 | GTCTCCAATGGTAGGTAGGTACA | 58.716 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
938 | 2286 | 2.156917 | ACACTGCTTGATCACCATGTG | 58.843 | 47.619 | 13.28 | 13.28 | 34.45 | 3.21 |
939 | 2287 | 1.471287 | CACTGCTTGATCACCATGTGG | 59.529 | 52.381 | 0.00 | 0.00 | 42.17 | 4.17 |
985 | 2333 | 5.685728 | AGGCTCTAAATTACTGATTCACCC | 58.314 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
1129 | 2481 | 3.177920 | CGCAGACAGCAGCTCGAC | 61.178 | 66.667 | 0.00 | 0.00 | 46.13 | 4.20 |
1638 | 2995 | 7.408132 | GGTACGTATAAGTATACACGTCTCA | 57.592 | 40.000 | 18.80 | 3.68 | 43.61 | 3.27 |
1643 | 3000 | 7.278646 | ACGTATAAGTATACACGTCTCACAGAA | 59.721 | 37.037 | 11.95 | 0.00 | 43.61 | 3.02 |
1644 | 3001 | 7.792967 | CGTATAAGTATACACGTCTCACAGAAG | 59.207 | 40.741 | 5.50 | 0.00 | 38.72 | 2.85 |
1659 | 3016 | 4.099120 | CACAGAAGTCGACGATTTCTAGG | 58.901 | 47.826 | 28.27 | 21.10 | 36.68 | 3.02 |
1661 | 3018 | 4.099120 | CAGAAGTCGACGATTTCTAGGTG | 58.901 | 47.826 | 28.27 | 16.87 | 36.68 | 4.00 |
1662 | 3019 | 4.008330 | AGAAGTCGACGATTTCTAGGTGA | 58.992 | 43.478 | 27.86 | 0.00 | 36.97 | 4.02 |
1663 | 3020 | 4.641094 | AGAAGTCGACGATTTCTAGGTGAT | 59.359 | 41.667 | 27.86 | 8.08 | 36.97 | 3.06 |
1664 | 3021 | 4.555348 | AGTCGACGATTTCTAGGTGATC | 57.445 | 45.455 | 10.46 | 0.00 | 0.00 | 2.92 |
1665 | 3022 | 4.200874 | AGTCGACGATTTCTAGGTGATCT | 58.799 | 43.478 | 10.46 | 0.00 | 0.00 | 2.75 |
1666 | 3023 | 4.641094 | AGTCGACGATTTCTAGGTGATCTT | 59.359 | 41.667 | 10.46 | 0.00 | 0.00 | 2.40 |
1667 | 3024 | 4.735822 | GTCGACGATTTCTAGGTGATCTTG | 59.264 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
1668 | 3025 | 4.638865 | TCGACGATTTCTAGGTGATCTTGA | 59.361 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
1669 | 3026 | 4.973051 | CGACGATTTCTAGGTGATCTTGAG | 59.027 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
1685 | 3042 | 1.795768 | TGAGTCTTGACGTGGCATTC | 58.204 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1686 | 3043 | 0.716108 | GAGTCTTGACGTGGCATTCG | 59.284 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
1687 | 3044 | 0.033504 | AGTCTTGACGTGGCATTCGT | 59.966 | 50.000 | 2.55 | 2.55 | 44.27 | 3.85 |
1729 | 3097 | 1.676635 | CTCGAGGGACGTGGTGGTA | 60.677 | 63.158 | 3.91 | 0.00 | 43.13 | 3.25 |
1744 | 3112 | 2.424733 | GGTAGACGGGCTGAGGTCC | 61.425 | 68.421 | 0.00 | 0.00 | 33.66 | 4.46 |
1954 | 3322 | 1.513158 | CAACCTCTGGATCGAGCGT | 59.487 | 57.895 | 0.00 | 0.00 | 0.00 | 5.07 |
1990 | 3358 | 0.944386 | GCCACGGCATAAGGTACATG | 59.056 | 55.000 | 2.36 | 0.00 | 41.49 | 3.21 |
2003 | 3371 | 7.518370 | GCATAAGGTACATGACAAGTTTATCGG | 60.518 | 40.741 | 0.00 | 0.00 | 0.00 | 4.18 |
2060 | 3432 | 3.244422 | TGAGCTAACCCAACGACATCTTT | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
2089 | 3461 | 6.636705 | ACTGTGTTAATAACTTAGCATCGGA | 58.363 | 36.000 | 4.67 | 0.00 | 31.81 | 4.55 |
2092 | 3464 | 6.036735 | TGTGTTAATAACTTAGCATCGGAAGC | 59.963 | 38.462 | 4.67 | 0.00 | 31.81 | 3.86 |
2182 | 3554 | 1.371183 | CACCTCAAACGGGCTGAGA | 59.629 | 57.895 | 0.00 | 0.00 | 42.51 | 3.27 |
2294 | 3666 | 4.808895 | TCATCGATCAAAATTACTGTCCCG | 59.191 | 41.667 | 0.00 | 0.00 | 0.00 | 5.14 |
2295 | 3667 | 2.933906 | TCGATCAAAATTACTGTCCCGC | 59.066 | 45.455 | 0.00 | 0.00 | 0.00 | 6.13 |
2348 | 3720 | 9.441077 | TGTTCTAAACATGTAGGAGTACTCCGC | 62.441 | 44.444 | 31.53 | 27.26 | 44.81 | 5.54 |
2355 | 3727 | 1.447643 | GGAGTACTCCGCATGGCAT | 59.552 | 57.895 | 25.83 | 0.00 | 40.36 | 4.40 |
2356 | 3728 | 0.882042 | GGAGTACTCCGCATGGCATG | 60.882 | 60.000 | 25.83 | 22.99 | 40.36 | 4.06 |
2359 | 3731 | 1.202533 | AGTACTCCGCATGGCATGTAC | 60.203 | 52.381 | 26.94 | 19.84 | 36.90 | 2.90 |
2375 | 3756 | 7.958088 | TGGCATGTACTATACAACAATAGCTA | 58.042 | 34.615 | 0.00 | 0.00 | 42.76 | 3.32 |
2376 | 3757 | 8.593679 | TGGCATGTACTATACAACAATAGCTAT | 58.406 | 33.333 | 0.00 | 0.00 | 42.76 | 2.97 |
2447 | 3831 | 2.983592 | CCCTTGACCCAACCGTGC | 60.984 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
2454 | 3838 | 1.782028 | GACCCAACCGTGCAGAACAC | 61.782 | 60.000 | 0.00 | 0.00 | 46.45 | 3.32 |
2461 | 3845 | 2.562912 | GTGCAGAACACCATGGCG | 59.437 | 61.111 | 13.04 | 4.48 | 44.02 | 5.69 |
2463 | 3847 | 1.002257 | TGCAGAACACCATGGCGAT | 60.002 | 52.632 | 13.04 | 0.00 | 0.00 | 4.58 |
2481 | 3865 | 6.098679 | TGGCGATATGGAAATTTGACAAAAG | 58.901 | 36.000 | 4.41 | 0.00 | 0.00 | 2.27 |
2560 | 3944 | 4.326009 | CCATGGCAGCAAAAACGTTTATAC | 59.674 | 41.667 | 15.03 | 6.48 | 0.00 | 1.47 |
2561 | 3945 | 4.839668 | TGGCAGCAAAAACGTTTATACT | 57.160 | 36.364 | 15.03 | 8.75 | 0.00 | 2.12 |
2614 | 4002 | 4.637483 | TGTTAATTAATCTGGCTGCTGC | 57.363 | 40.909 | 7.10 | 7.10 | 38.76 | 5.25 |
2877 | 4265 | 2.047179 | GTTGGTCTCGTCCTGCCC | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
2895 | 4283 | 1.376942 | CCCAAGCTGCCTCTGACAG | 60.377 | 63.158 | 0.00 | 0.00 | 38.22 | 3.51 |
2900 | 4288 | 2.935201 | CAAGCTGCCTCTGACAGTATTC | 59.065 | 50.000 | 1.59 | 0.00 | 37.47 | 1.75 |
2903 | 4291 | 2.354103 | GCTGCCTCTGACAGTATTCACA | 60.354 | 50.000 | 1.59 | 0.00 | 37.47 | 3.58 |
2905 | 4293 | 4.511527 | CTGCCTCTGACAGTATTCACAAT | 58.488 | 43.478 | 1.59 | 0.00 | 0.00 | 2.71 |
2906 | 4294 | 5.664457 | CTGCCTCTGACAGTATTCACAATA | 58.336 | 41.667 | 1.59 | 0.00 | 0.00 | 1.90 |
2920 | 4308 | 8.417106 | AGTATTCACAATAGACTACACTCATGG | 58.583 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
2950 | 4343 | 3.189495 | CCACACGTGTAACATAATTGGCA | 59.811 | 43.478 | 22.90 | 0.00 | 35.74 | 4.92 |
2966 | 4360 | 1.545136 | TGGCACGGAATGTAACGTAGA | 59.455 | 47.619 | 0.00 | 0.00 | 42.04 | 2.59 |
2974 | 4368 | 4.443394 | CGGAATGTAACGTAGAATAGTGGC | 59.557 | 45.833 | 0.00 | 0.00 | 0.00 | 5.01 |
2975 | 4369 | 4.443394 | GGAATGTAACGTAGAATAGTGGCG | 59.557 | 45.833 | 0.00 | 0.00 | 0.00 | 5.69 |
2976 | 4370 | 4.644103 | ATGTAACGTAGAATAGTGGCGT | 57.356 | 40.909 | 0.00 | 0.00 | 37.38 | 5.68 |
2980 | 4374 | 0.921347 | CGTAGAATAGTGGCGTGTGC | 59.079 | 55.000 | 0.00 | 0.00 | 41.71 | 4.57 |
3052 | 4454 | 9.724839 | TTTTAGAAACGTTTCAATTTGTAGGAG | 57.275 | 29.630 | 35.29 | 0.00 | 39.61 | 3.69 |
3059 | 4461 | 9.458374 | AACGTTTCAATTTGTAGGAGTTTTATG | 57.542 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
3060 | 4462 | 8.842280 | ACGTTTCAATTTGTAGGAGTTTTATGA | 58.158 | 29.630 | 0.00 | 0.00 | 0.00 | 2.15 |
3075 | 4481 | 7.308649 | GGAGTTTTATGAAGTTCAGAAGTTCCC | 60.309 | 40.741 | 22.81 | 12.97 | 39.55 | 3.97 |
3077 | 4483 | 7.229506 | AGTTTTATGAAGTTCAGAAGTTCCCAG | 59.770 | 37.037 | 22.81 | 0.00 | 39.55 | 4.45 |
3079 | 4485 | 3.808728 | TGAAGTTCAGAAGTTCCCAGTG | 58.191 | 45.455 | 22.81 | 0.00 | 39.55 | 3.66 |
3081 | 4487 | 3.477210 | AGTTCAGAAGTTCCCAGTGAC | 57.523 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
3097 | 4503 | 9.581289 | TTCCCAGTGACTTGAAATCTAATTTAA | 57.419 | 29.630 | 0.00 | 0.00 | 31.47 | 1.52 |
3123 | 4529 | 7.601705 | TCTTCCATGAAACAAATTTCCTTCT | 57.398 | 32.000 | 0.00 | 0.00 | 43.18 | 2.85 |
3130 | 4536 | 8.981647 | CATGAAACAAATTTCCTTCTCGATTTT | 58.018 | 29.630 | 9.20 | 0.00 | 43.18 | 1.82 |
3141 | 4547 | 7.230466 | TCCTTCTCGATTTTATTAACGAAGC | 57.770 | 36.000 | 0.00 | 0.00 | 34.50 | 3.86 |
3144 | 4550 | 6.583912 | TCTCGATTTTATTAACGAAGCCAG | 57.416 | 37.500 | 0.00 | 0.00 | 34.50 | 4.85 |
3146 | 4552 | 4.034742 | TCGATTTTATTAACGAAGCCAGGC | 59.965 | 41.667 | 1.84 | 1.84 | 0.00 | 4.85 |
3151 | 4557 | 6.761099 | TTTATTAACGAAGCCAGGCATTTA | 57.239 | 33.333 | 15.80 | 2.08 | 0.00 | 1.40 |
3154 | 4560 | 1.453155 | ACGAAGCCAGGCATTTACAG | 58.547 | 50.000 | 15.80 | 0.00 | 0.00 | 2.74 |
3170 | 4576 | 0.613012 | ACAGCAGGCCCAAAAGATCC | 60.613 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3172 | 4578 | 3.068729 | GCAGGCCCAAAAGATCCGC | 62.069 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
3177 | 4583 | 1.270571 | GGCCCAAAAGATCCGCAAAAA | 60.271 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
3178 | 4584 | 2.068519 | GCCCAAAAGATCCGCAAAAAG | 58.931 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
3183 | 4589 | 5.277297 | CCCAAAAGATCCGCAAAAAGAAAAC | 60.277 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3187 | 4593 | 1.551145 | TCCGCAAAAAGAAAACGTGC | 58.449 | 45.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3188 | 4594 | 1.133407 | TCCGCAAAAAGAAAACGTGCT | 59.867 | 42.857 | 0.00 | 0.00 | 32.99 | 4.40 |
3193 | 4599 | 4.105486 | GCAAAAAGAAAACGTGCTCTCTT | 58.895 | 39.130 | 0.00 | 0.00 | 32.43 | 2.85 |
3195 | 4601 | 5.499176 | GCAAAAAGAAAACGTGCTCTCTTTG | 60.499 | 40.000 | 16.24 | 16.24 | 37.98 | 2.77 |
3206 | 4612 | 2.093606 | TGCTCTCTTTGCATCAGAGGAG | 60.094 | 50.000 | 18.77 | 15.61 | 38.71 | 3.69 |
3221 | 4627 | 4.833380 | TCAGAGGAGGAATTAGGAATACCG | 59.167 | 45.833 | 0.00 | 0.00 | 41.83 | 4.02 |
3222 | 4628 | 3.579151 | AGAGGAGGAATTAGGAATACCGC | 59.421 | 47.826 | 0.00 | 0.00 | 41.83 | 5.68 |
3223 | 4629 | 2.638363 | AGGAGGAATTAGGAATACCGCC | 59.362 | 50.000 | 0.00 | 0.00 | 41.83 | 6.13 |
3224 | 4630 | 2.290134 | GGAGGAATTAGGAATACCGCCC | 60.290 | 54.545 | 0.00 | 0.00 | 41.83 | 6.13 |
3225 | 4631 | 1.346722 | AGGAATTAGGAATACCGCCCG | 59.653 | 52.381 | 0.00 | 0.00 | 41.83 | 6.13 |
3226 | 4632 | 1.154197 | GAATTAGGAATACCGCCCGC | 58.846 | 55.000 | 0.00 | 0.00 | 41.83 | 6.13 |
3227 | 4633 | 0.470766 | AATTAGGAATACCGCCCGCA | 59.529 | 50.000 | 0.00 | 0.00 | 41.83 | 5.69 |
3228 | 4634 | 0.034896 | ATTAGGAATACCGCCCGCAG | 59.965 | 55.000 | 0.00 | 0.00 | 41.83 | 5.18 |
3229 | 4635 | 2.035237 | TTAGGAATACCGCCCGCAGG | 62.035 | 60.000 | 0.00 | 0.00 | 45.33 | 4.85 |
3280 | 4686 | 1.218854 | GTGCCCATCCATTTGTGCC | 59.781 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
3285 | 4691 | 2.170187 | GCCCATCCATTTGTGCCATAAA | 59.830 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
3293 | 4699 | 4.504689 | CCATTTGTGCCATAAACCACCTTT | 60.505 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
3294 | 4700 | 3.742433 | TTGTGCCATAAACCACCTTTG | 57.258 | 42.857 | 0.00 | 0.00 | 0.00 | 2.77 |
3295 | 4701 | 2.672098 | TGTGCCATAAACCACCTTTGT | 58.328 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
3296 | 4702 | 3.034635 | TGTGCCATAAACCACCTTTGTT | 58.965 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
3317 | 4723 | 4.827036 | TGCTACCTCCCCTAATCTTCTA | 57.173 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
3318 | 4724 | 4.742012 | TGCTACCTCCCCTAATCTTCTAG | 58.258 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
3329 | 4735 | 7.568738 | TCCCCTAATCTTCTAGATCATTGTTGA | 59.431 | 37.037 | 0.00 | 0.00 | 32.89 | 3.18 |
3330 | 4736 | 8.213679 | CCCCTAATCTTCTAGATCATTGTTGAA | 58.786 | 37.037 | 0.00 | 0.00 | 32.89 | 2.69 |
3340 | 4746 | 8.156820 | TCTAGATCATTGTTGAAGAACCTTTCA | 58.843 | 33.333 | 0.00 | 0.00 | 34.96 | 2.69 |
3343 | 4749 | 6.331369 | TCATTGTTGAAGAACCTTTCATCC | 57.669 | 37.500 | 0.00 | 0.00 | 36.97 | 3.51 |
3344 | 4750 | 5.832595 | TCATTGTTGAAGAACCTTTCATCCA | 59.167 | 36.000 | 0.00 | 0.00 | 36.97 | 3.41 |
3349 | 4755 | 6.831353 | TGTTGAAGAACCTTTCATCCACTTTA | 59.169 | 34.615 | 0.00 | 0.00 | 36.97 | 1.85 |
3350 | 4756 | 7.013274 | TGTTGAAGAACCTTTCATCCACTTTAG | 59.987 | 37.037 | 0.00 | 0.00 | 36.97 | 1.85 |
3351 | 4757 | 6.003950 | TGAAGAACCTTTCATCCACTTTAGG | 58.996 | 40.000 | 0.00 | 0.00 | 32.39 | 2.69 |
3352 | 4758 | 4.923415 | AGAACCTTTCATCCACTTTAGGG | 58.077 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
3353 | 4759 | 3.087370 | ACCTTTCATCCACTTTAGGGC | 57.913 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
3354 | 4760 | 2.378547 | ACCTTTCATCCACTTTAGGGCA | 59.621 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
3355 | 4761 | 3.011708 | ACCTTTCATCCACTTTAGGGCAT | 59.988 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
3356 | 4762 | 3.633986 | CCTTTCATCCACTTTAGGGCATC | 59.366 | 47.826 | 0.00 | 0.00 | 0.00 | 3.91 |
3357 | 4763 | 4.530875 | CTTTCATCCACTTTAGGGCATCT | 58.469 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
3358 | 4764 | 3.845781 | TCATCCACTTTAGGGCATCTC | 57.154 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
3359 | 4765 | 2.439507 | TCATCCACTTTAGGGCATCTCC | 59.560 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3360 | 4766 | 1.965414 | TCCACTTTAGGGCATCTCCA | 58.035 | 50.000 | 0.00 | 0.00 | 36.21 | 3.86 |
3361 | 4767 | 2.274542 | TCCACTTTAGGGCATCTCCAA | 58.725 | 47.619 | 0.00 | 0.00 | 36.21 | 3.53 |
3362 | 4768 | 2.026262 | TCCACTTTAGGGCATCTCCAAC | 60.026 | 50.000 | 0.00 | 0.00 | 36.21 | 3.77 |
3363 | 4769 | 2.009774 | CACTTTAGGGCATCTCCAACG | 58.990 | 52.381 | 0.00 | 0.00 | 36.21 | 4.10 |
3364 | 4770 | 1.017387 | CTTTAGGGCATCTCCAACGC | 58.983 | 55.000 | 0.00 | 0.00 | 36.21 | 4.84 |
3365 | 4771 | 0.393808 | TTTAGGGCATCTCCAACGCC | 60.394 | 55.000 | 0.00 | 0.00 | 45.47 | 5.68 |
3368 | 4774 | 3.195698 | GGCATCTCCAACGCCGTC | 61.196 | 66.667 | 0.00 | 0.00 | 35.79 | 4.79 |
3369 | 4775 | 3.195698 | GCATCTCCAACGCCGTCC | 61.196 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3370 | 4776 | 2.511600 | CATCTCCAACGCCGTCCC | 60.512 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
3371 | 4777 | 2.683933 | ATCTCCAACGCCGTCCCT | 60.684 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
3372 | 4778 | 2.722201 | ATCTCCAACGCCGTCCCTC | 61.722 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
3373 | 4779 | 3.691342 | CTCCAACGCCGTCCCTCA | 61.691 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
3374 | 4780 | 3.234630 | CTCCAACGCCGTCCCTCAA | 62.235 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
3375 | 4781 | 2.281208 | CCAACGCCGTCCCTCAAA | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 2.69 |
3376 | 4782 | 2.613506 | CCAACGCCGTCCCTCAAAC | 61.614 | 63.158 | 0.00 | 0.00 | 0.00 | 2.93 |
3377 | 4783 | 2.281276 | AACGCCGTCCCTCAAACC | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 3.27 |
3378 | 4784 | 3.109592 | AACGCCGTCCCTCAAACCA | 62.110 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
3379 | 4785 | 3.047877 | CGCCGTCCCTCAAACCAC | 61.048 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
3380 | 4786 | 2.671963 | GCCGTCCCTCAAACCACC | 60.672 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3381 | 4787 | 3.157680 | CCGTCCCTCAAACCACCT | 58.842 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
3382 | 4788 | 1.302511 | CCGTCCCTCAAACCACCTG | 60.303 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
3383 | 4789 | 1.966451 | CGTCCCTCAAACCACCTGC | 60.966 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
3384 | 4790 | 1.150536 | GTCCCTCAAACCACCTGCA | 59.849 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
3385 | 4791 | 0.251341 | GTCCCTCAAACCACCTGCAT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
3386 | 4792 | 0.251297 | TCCCTCAAACCACCTGCATG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
3387 | 4793 | 0.251297 | CCCTCAAACCACCTGCATGA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
3388 | 4794 | 1.619654 | CCTCAAACCACCTGCATGAA | 58.380 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3389 | 4795 | 2.173519 | CCTCAAACCACCTGCATGAAT | 58.826 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
3390 | 4796 | 2.094390 | CCTCAAACCACCTGCATGAATG | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3410 | 4816 | 3.005823 | CGTACGCGGGGTTATATCG | 57.994 | 57.895 | 12.47 | 0.00 | 0.00 | 2.92 |
3411 | 4817 | 0.516877 | CGTACGCGGGGTTATATCGA | 59.483 | 55.000 | 12.47 | 0.00 | 0.00 | 3.59 |
3412 | 4818 | 1.131126 | CGTACGCGGGGTTATATCGAT | 59.869 | 52.381 | 12.47 | 2.16 | 0.00 | 3.59 |
3413 | 4819 | 2.789092 | CGTACGCGGGGTTATATCGATC | 60.789 | 54.545 | 12.47 | 0.00 | 0.00 | 3.69 |
3414 | 4820 | 0.529378 | ACGCGGGGTTATATCGATCC | 59.471 | 55.000 | 12.47 | 0.00 | 0.00 | 3.36 |
3415 | 4821 | 0.815734 | CGCGGGGTTATATCGATCCT | 59.184 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
3416 | 4822 | 1.202268 | CGCGGGGTTATATCGATCCTC | 60.202 | 57.143 | 0.00 | 0.00 | 0.00 | 3.71 |
3417 | 4823 | 2.100989 | GCGGGGTTATATCGATCCTCT | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
3418 | 4824 | 2.159226 | GCGGGGTTATATCGATCCTCTG | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 3.35 |
3419 | 4825 | 3.353557 | CGGGGTTATATCGATCCTCTGA | 58.646 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3420 | 4826 | 3.378742 | CGGGGTTATATCGATCCTCTGAG | 59.621 | 52.174 | 0.00 | 0.00 | 0.00 | 3.35 |
3421 | 4827 | 4.345854 | GGGGTTATATCGATCCTCTGAGT | 58.654 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
3422 | 4828 | 5.507637 | GGGGTTATATCGATCCTCTGAGTA | 58.492 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
3423 | 4829 | 6.130569 | GGGGTTATATCGATCCTCTGAGTAT | 58.869 | 44.000 | 0.00 | 0.00 | 0.00 | 2.12 |
3424 | 4830 | 6.039941 | GGGGTTATATCGATCCTCTGAGTATG | 59.960 | 46.154 | 0.00 | 0.00 | 0.00 | 2.39 |
3425 | 4831 | 6.039941 | GGGTTATATCGATCCTCTGAGTATGG | 59.960 | 46.154 | 0.00 | 0.00 | 0.00 | 2.74 |
3426 | 4832 | 6.829298 | GGTTATATCGATCCTCTGAGTATGGA | 59.171 | 42.308 | 0.00 | 0.57 | 0.00 | 3.41 |
3427 | 4833 | 7.201750 | GGTTATATCGATCCTCTGAGTATGGAC | 60.202 | 44.444 | 0.00 | 0.00 | 32.16 | 4.02 |
3428 | 4834 | 3.577805 | TCGATCCTCTGAGTATGGACA | 57.422 | 47.619 | 3.66 | 0.00 | 32.16 | 4.02 |
3429 | 4835 | 3.215151 | TCGATCCTCTGAGTATGGACAC | 58.785 | 50.000 | 3.66 | 0.00 | 32.16 | 3.67 |
3430 | 4836 | 2.952310 | CGATCCTCTGAGTATGGACACA | 59.048 | 50.000 | 3.66 | 0.00 | 32.16 | 3.72 |
3431 | 4837 | 3.243234 | CGATCCTCTGAGTATGGACACAC | 60.243 | 52.174 | 3.66 | 0.00 | 32.16 | 3.82 |
3432 | 4838 | 3.458044 | TCCTCTGAGTATGGACACACT | 57.542 | 47.619 | 3.66 | 0.00 | 0.00 | 3.55 |
3433 | 4839 | 3.779444 | TCCTCTGAGTATGGACACACTT | 58.221 | 45.455 | 3.66 | 0.00 | 0.00 | 3.16 |
3434 | 4840 | 4.160329 | TCCTCTGAGTATGGACACACTTT | 58.840 | 43.478 | 3.66 | 0.00 | 0.00 | 2.66 |
3435 | 4841 | 4.593206 | TCCTCTGAGTATGGACACACTTTT | 59.407 | 41.667 | 3.66 | 0.00 | 0.00 | 2.27 |
3436 | 4842 | 5.071788 | TCCTCTGAGTATGGACACACTTTTT | 59.928 | 40.000 | 3.66 | 0.00 | 0.00 | 1.94 |
3437 | 4843 | 5.409826 | CCTCTGAGTATGGACACACTTTTTC | 59.590 | 44.000 | 3.66 | 0.00 | 0.00 | 2.29 |
3438 | 4844 | 5.305585 | TCTGAGTATGGACACACTTTTTCC | 58.694 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
3439 | 4845 | 4.394729 | TGAGTATGGACACACTTTTTCCC | 58.605 | 43.478 | 0.00 | 0.00 | 0.00 | 3.97 |
3440 | 4846 | 3.408634 | AGTATGGACACACTTTTTCCCG | 58.591 | 45.455 | 0.00 | 0.00 | 0.00 | 5.14 |
3441 | 4847 | 0.958822 | ATGGACACACTTTTTCCCGC | 59.041 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3442 | 4848 | 0.394488 | TGGACACACTTTTTCCCGCA | 60.394 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3443 | 4849 | 0.741915 | GGACACACTTTTTCCCGCAA | 59.258 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3444 | 4850 | 1.135333 | GGACACACTTTTTCCCGCAAA | 59.865 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
3445 | 4851 | 2.417515 | GGACACACTTTTTCCCGCAAAA | 60.418 | 45.455 | 0.00 | 0.00 | 31.73 | 2.44 |
3813 | 5219 | 3.642141 | TGGGCCTATTTTCTTCCAATCC | 58.358 | 45.455 | 4.53 | 0.00 | 0.00 | 3.01 |
3814 | 5220 | 3.012274 | TGGGCCTATTTTCTTCCAATCCA | 59.988 | 43.478 | 4.53 | 0.00 | 0.00 | 3.41 |
3815 | 5221 | 3.384789 | GGGCCTATTTTCTTCCAATCCAC | 59.615 | 47.826 | 0.84 | 0.00 | 0.00 | 4.02 |
3816 | 5222 | 3.384789 | GGCCTATTTTCTTCCAATCCACC | 59.615 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
3817 | 5223 | 3.384789 | GCCTATTTTCTTCCAATCCACCC | 59.615 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
3818 | 5224 | 3.960755 | CCTATTTTCTTCCAATCCACCCC | 59.039 | 47.826 | 0.00 | 0.00 | 0.00 | 4.95 |
3819 | 5225 | 3.852858 | ATTTTCTTCCAATCCACCCCT | 57.147 | 42.857 | 0.00 | 0.00 | 0.00 | 4.79 |
3820 | 5226 | 3.628832 | TTTTCTTCCAATCCACCCCTT | 57.371 | 42.857 | 0.00 | 0.00 | 0.00 | 3.95 |
3821 | 5227 | 2.899303 | TTCTTCCAATCCACCCCTTC | 57.101 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3822 | 5228 | 2.059756 | TCTTCCAATCCACCCCTTCT | 57.940 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3823 | 5229 | 1.916181 | TCTTCCAATCCACCCCTTCTC | 59.084 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
3824 | 5230 | 1.918957 | CTTCCAATCCACCCCTTCTCT | 59.081 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
3825 | 5231 | 1.584724 | TCCAATCCACCCCTTCTCTC | 58.415 | 55.000 | 0.00 | 0.00 | 0.00 | 3.20 |
3826 | 5232 | 0.548510 | CCAATCCACCCCTTCTCTCC | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3827 | 5233 | 0.548510 | CAATCCACCCCTTCTCTCCC | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3828 | 5234 | 0.624795 | AATCCACCCCTTCTCTCCCC | 60.625 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
3829 | 5235 | 1.541168 | ATCCACCCCTTCTCTCCCCT | 61.541 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3830 | 5236 | 1.229984 | CCACCCCTTCTCTCCCCTT | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
3831 | 5237 | 1.566298 | CCACCCCTTCTCTCCCCTTG | 61.566 | 65.000 | 0.00 | 0.00 | 0.00 | 3.61 |
3832 | 5238 | 1.925972 | ACCCCTTCTCTCCCCTTGC | 60.926 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
3833 | 5239 | 1.617839 | CCCCTTCTCTCCCCTTGCT | 60.618 | 63.158 | 0.00 | 0.00 | 0.00 | 3.91 |
3834 | 5240 | 1.210885 | CCCCTTCTCTCCCCTTGCTT | 61.211 | 60.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3835 | 5241 | 0.701147 | CCCTTCTCTCCCCTTGCTTT | 59.299 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3836 | 5242 | 1.615384 | CCCTTCTCTCCCCTTGCTTTG | 60.615 | 57.143 | 0.00 | 0.00 | 0.00 | 2.77 |
3837 | 5243 | 1.172175 | CTTCTCTCCCCTTGCTTTGC | 58.828 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3838 | 5244 | 0.478072 | TTCTCTCCCCTTGCTTTGCA | 59.522 | 50.000 | 0.00 | 0.00 | 36.47 | 4.08 |
3839 | 5245 | 0.700564 | TCTCTCCCCTTGCTTTGCAT | 59.299 | 50.000 | 0.00 | 0.00 | 38.76 | 3.96 |
3840 | 5246 | 1.101331 | CTCTCCCCTTGCTTTGCATC | 58.899 | 55.000 | 0.00 | 0.00 | 38.76 | 3.91 |
3841 | 5247 | 0.323725 | TCTCCCCTTGCTTTGCATCC | 60.324 | 55.000 | 0.00 | 0.00 | 38.76 | 3.51 |
3842 | 5248 | 1.660560 | CTCCCCTTGCTTTGCATCCG | 61.661 | 60.000 | 0.00 | 0.00 | 38.76 | 4.18 |
3843 | 5249 | 2.182537 | CCCTTGCTTTGCATCCGC | 59.817 | 61.111 | 0.00 | 0.00 | 38.76 | 5.54 |
3852 | 5258 | 3.785859 | TGCATCCGCACCCTCCTC | 61.786 | 66.667 | 0.00 | 0.00 | 45.36 | 3.71 |
3853 | 5259 | 4.554036 | GCATCCGCACCCTCCTCC | 62.554 | 72.222 | 0.00 | 0.00 | 38.36 | 4.30 |
3854 | 5260 | 2.765807 | CATCCGCACCCTCCTCCT | 60.766 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
3855 | 5261 | 2.444895 | ATCCGCACCCTCCTCCTC | 60.445 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
3856 | 5262 | 4.779733 | TCCGCACCCTCCTCCTCC | 62.780 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
3860 | 5266 | 2.279073 | CACCCTCCTCCTCCGCTA | 59.721 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
3861 | 5267 | 2.128507 | CACCCTCCTCCTCCGCTAC | 61.129 | 68.421 | 0.00 | 0.00 | 0.00 | 3.58 |
3862 | 5268 | 2.522193 | CCCTCCTCCTCCGCTACC | 60.522 | 72.222 | 0.00 | 0.00 | 0.00 | 3.18 |
3863 | 5269 | 2.907917 | CCTCCTCCTCCGCTACCG | 60.908 | 72.222 | 0.00 | 0.00 | 0.00 | 4.02 |
3864 | 5270 | 3.597728 | CTCCTCCTCCGCTACCGC | 61.598 | 72.222 | 0.00 | 0.00 | 0.00 | 5.68 |
3867 | 5273 | 4.208686 | CTCCTCCGCTACCGCCAC | 62.209 | 72.222 | 0.00 | 0.00 | 0.00 | 5.01 |
3868 | 5274 | 4.753662 | TCCTCCGCTACCGCCACT | 62.754 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
3869 | 5275 | 4.208686 | CCTCCGCTACCGCCACTC | 62.209 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
3870 | 5276 | 3.141488 | CTCCGCTACCGCCACTCT | 61.141 | 66.667 | 0.00 | 0.00 | 0.00 | 3.24 |
3871 | 5277 | 1.822613 | CTCCGCTACCGCCACTCTA | 60.823 | 63.158 | 0.00 | 0.00 | 0.00 | 2.43 |
3872 | 5278 | 2.061182 | CTCCGCTACCGCCACTCTAC | 62.061 | 65.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3873 | 5279 | 2.412112 | CGCTACCGCCACTCTACC | 59.588 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
3874 | 5280 | 2.119655 | CGCTACCGCCACTCTACCT | 61.120 | 63.158 | 0.00 | 0.00 | 0.00 | 3.08 |
3875 | 5281 | 1.734748 | GCTACCGCCACTCTACCTC | 59.265 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
3876 | 5282 | 0.752376 | GCTACCGCCACTCTACCTCT | 60.752 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3877 | 5283 | 1.310904 | CTACCGCCACTCTACCTCTC | 58.689 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
3878 | 5284 | 0.106819 | TACCGCCACTCTACCTCTCC | 60.107 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3879 | 5285 | 2.482333 | CCGCCACTCTACCTCTCCG | 61.482 | 68.421 | 0.00 | 0.00 | 0.00 | 4.63 |
3880 | 5286 | 2.809010 | GCCACTCTACCTCTCCGC | 59.191 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
3881 | 5287 | 2.787567 | GCCACTCTACCTCTCCGCC | 61.788 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
3882 | 5288 | 2.128507 | CCACTCTACCTCTCCGCCC | 61.129 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
3883 | 5289 | 1.379977 | CACTCTACCTCTCCGCCCA | 60.380 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
3884 | 5290 | 0.970937 | CACTCTACCTCTCCGCCCAA | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 4.12 |
3885 | 5291 | 0.971447 | ACTCTACCTCTCCGCCCAAC | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3886 | 5292 | 2.005960 | CTCTACCTCTCCGCCCAACG | 62.006 | 65.000 | 0.00 | 0.00 | 43.15 | 4.10 |
3887 | 5293 | 3.718210 | CTACCTCTCCGCCCAACGC | 62.718 | 68.421 | 0.00 | 0.00 | 41.76 | 4.84 |
3890 | 5296 | 4.680237 | CTCTCCGCCCAACGCACA | 62.680 | 66.667 | 0.00 | 0.00 | 41.76 | 4.57 |
3891 | 5297 | 3.958147 | CTCTCCGCCCAACGCACAT | 62.958 | 63.158 | 0.00 | 0.00 | 41.76 | 3.21 |
3892 | 5298 | 3.803082 | CTCCGCCCAACGCACATG | 61.803 | 66.667 | 0.00 | 0.00 | 41.76 | 3.21 |
3895 | 5301 | 4.118995 | CGCCCAACGCACATGCAT | 62.119 | 61.111 | 4.49 | 0.00 | 42.21 | 3.96 |
3896 | 5302 | 2.262292 | GCCCAACGCACATGCATT | 59.738 | 55.556 | 0.00 | 0.00 | 42.21 | 3.56 |
3897 | 5303 | 2.095847 | GCCCAACGCACATGCATTG | 61.096 | 57.895 | 5.71 | 5.71 | 43.06 | 2.82 |
3898 | 5304 | 2.095847 | CCCAACGCACATGCATTGC | 61.096 | 57.895 | 18.26 | 18.26 | 42.21 | 3.56 |
3899 | 5305 | 2.095847 | CCAACGCACATGCATTGCC | 61.096 | 57.895 | 20.70 | 9.26 | 42.21 | 4.52 |
3900 | 5306 | 2.126385 | AACGCACATGCATTGCCG | 60.126 | 55.556 | 20.70 | 18.14 | 42.21 | 5.69 |
3901 | 5307 | 3.629883 | AACGCACATGCATTGCCGG | 62.630 | 57.895 | 20.70 | 0.00 | 42.21 | 6.13 |
3902 | 5308 | 3.813143 | CGCACATGCATTGCCGGA | 61.813 | 61.111 | 20.70 | 0.00 | 42.21 | 5.14 |
3903 | 5309 | 2.202650 | GCACATGCATTGCCGGAC | 60.203 | 61.111 | 5.05 | 0.00 | 41.59 | 4.79 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
82 | 84 | 7.147828 | CCATAGACTTGTGATCTTTGTAGGAGA | 60.148 | 40.741 | 0.00 | 0.00 | 0.00 | 3.71 |
123 | 125 | 3.181493 | GCGACCTCATGCATTCTTTGAAT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
188 | 190 | 5.423610 | ACAAATGGACTAGTCATCTAGCAGT | 59.576 | 40.000 | 23.91 | 8.28 | 45.32 | 4.40 |
259 | 1486 | 2.768492 | CCAGAAAGCGGCCATGAGC | 61.768 | 63.158 | 2.24 | 0.00 | 42.60 | 4.26 |
261 | 1488 | 1.675310 | CACCAGAAAGCGGCCATGA | 60.675 | 57.895 | 2.24 | 0.00 | 0.00 | 3.07 |
263 | 1490 | 2.361610 | CCACCAGAAAGCGGCCAT | 60.362 | 61.111 | 2.24 | 0.00 | 0.00 | 4.40 |
264 | 1491 | 3.842925 | GACCACCAGAAAGCGGCCA | 62.843 | 63.158 | 2.24 | 0.00 | 0.00 | 5.36 |
265 | 1492 | 3.056328 | GACCACCAGAAAGCGGCC | 61.056 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
266 | 1493 | 1.452145 | TTTGACCACCAGAAAGCGGC | 61.452 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
267 | 1494 | 1.001378 | CTTTTGACCACCAGAAAGCGG | 60.001 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
268 | 1495 | 1.946768 | TCTTTTGACCACCAGAAAGCG | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
269 | 1496 | 4.202151 | ACAATCTTTTGACCACCAGAAAGC | 60.202 | 41.667 | 0.00 | 0.00 | 36.64 | 3.51 |
270 | 1497 | 5.520376 | ACAATCTTTTGACCACCAGAAAG | 57.480 | 39.130 | 0.00 | 0.00 | 36.64 | 2.62 |
271 | 1498 | 5.930837 | AACAATCTTTTGACCACCAGAAA | 57.069 | 34.783 | 0.00 | 0.00 | 36.64 | 2.52 |
318 | 1547 | 6.620678 | GTCTTCTATGGTTATGCTGCAAAAA | 58.379 | 36.000 | 6.36 | 1.06 | 0.00 | 1.94 |
319 | 1548 | 5.163764 | CGTCTTCTATGGTTATGCTGCAAAA | 60.164 | 40.000 | 6.36 | 0.00 | 0.00 | 2.44 |
320 | 1549 | 4.332543 | CGTCTTCTATGGTTATGCTGCAAA | 59.667 | 41.667 | 6.36 | 0.00 | 0.00 | 3.68 |
321 | 1550 | 3.871006 | CGTCTTCTATGGTTATGCTGCAA | 59.129 | 43.478 | 6.36 | 0.00 | 0.00 | 4.08 |
322 | 1551 | 3.132111 | TCGTCTTCTATGGTTATGCTGCA | 59.868 | 43.478 | 4.13 | 4.13 | 0.00 | 4.41 |
333 | 1562 | 6.541086 | ACTACAGTTTACGTCGTCTTCTATG | 58.459 | 40.000 | 0.00 | 0.00 | 0.00 | 2.23 |
334 | 1563 | 6.734104 | ACTACAGTTTACGTCGTCTTCTAT | 57.266 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
418 | 1664 | 1.602323 | TTGCTAGTTGGGTTGGCCG | 60.602 | 57.895 | 0.00 | 0.00 | 34.97 | 6.13 |
484 | 1730 | 0.652592 | CGCGACCTGATCAACAATCC | 59.347 | 55.000 | 0.00 | 0.00 | 33.01 | 3.01 |
486 | 1732 | 0.744414 | CCCGCGACCTGATCAACAAT | 60.744 | 55.000 | 8.23 | 0.00 | 0.00 | 2.71 |
517 | 1763 | 2.608261 | CGAGTTCGAAACTTGAGCTCCT | 60.608 | 50.000 | 12.15 | 0.00 | 44.20 | 3.69 |
589 | 1840 | 8.501904 | TCCTTCAATCCATATTAATTGACCTGA | 58.498 | 33.333 | 8.40 | 4.59 | 40.58 | 3.86 |
606 | 1857 | 9.573133 | CATTTTATGTTGGTACTTCCTTCAATC | 57.427 | 33.333 | 0.00 | 0.00 | 37.07 | 2.67 |
659 | 1994 | 2.508663 | GAGGCCGGTTGTACGCTC | 60.509 | 66.667 | 1.90 | 0.00 | 0.00 | 5.03 |
724 | 2062 | 0.871722 | CGTTGATGGTTTTGCGGAGA | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
729 | 2067 | 5.457140 | TCTGTTAATCGTTGATGGTTTTGC | 58.543 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
846 | 2184 | 5.440610 | GGAGACTATGAAATTCCCATGTGT | 58.559 | 41.667 | 0.00 | 3.56 | 0.00 | 3.72 |
904 | 2242 | 3.721021 | AGCAGTGTACCTACCTACCATT | 58.279 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
915 | 2253 | 2.472695 | TGGTGATCAAGCAGTGTACC | 57.527 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
920 | 2258 | 1.830279 | CCACATGGTGATCAAGCAGT | 58.170 | 50.000 | 0.00 | 0.00 | 40.26 | 4.40 |
958 | 2306 | 9.343539 | GGTGAATCAGTAATTTAGAGCCTTAAT | 57.656 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
959 | 2307 | 7.773690 | GGGTGAATCAGTAATTTAGAGCCTTAA | 59.226 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
963 | 2311 | 4.511826 | CGGGTGAATCAGTAATTTAGAGCC | 59.488 | 45.833 | 0.00 | 0.00 | 0.00 | 4.70 |
964 | 2312 | 4.024809 | GCGGGTGAATCAGTAATTTAGAGC | 60.025 | 45.833 | 0.00 | 0.00 | 0.00 | 4.09 |
965 | 2313 | 5.360591 | AGCGGGTGAATCAGTAATTTAGAG | 58.639 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
966 | 2314 | 5.353394 | AGCGGGTGAATCAGTAATTTAGA | 57.647 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
967 | 2315 | 5.584649 | TCAAGCGGGTGAATCAGTAATTTAG | 59.415 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1174 | 2530 | 0.889186 | CCGTTGTTGGGGAGGAACAG | 60.889 | 60.000 | 0.00 | 0.00 | 34.85 | 3.16 |
1226 | 2582 | 4.360964 | CGTCGTACACCGCCCCAA | 62.361 | 66.667 | 0.00 | 0.00 | 36.19 | 4.12 |
1353 | 2709 | 4.047125 | ACCAGGAACATGCCCGGG | 62.047 | 66.667 | 19.09 | 19.09 | 43.46 | 5.73 |
1621 | 2977 | 7.465647 | CGACTTCTGTGAGACGTGTATACTTAT | 60.466 | 40.741 | 4.17 | 0.00 | 31.81 | 1.73 |
1622 | 2978 | 6.183360 | CGACTTCTGTGAGACGTGTATACTTA | 60.183 | 42.308 | 4.17 | 0.00 | 31.81 | 2.24 |
1623 | 2979 | 5.390673 | CGACTTCTGTGAGACGTGTATACTT | 60.391 | 44.000 | 4.17 | 0.00 | 31.81 | 2.24 |
1624 | 2980 | 4.093115 | CGACTTCTGTGAGACGTGTATACT | 59.907 | 45.833 | 4.17 | 0.00 | 31.81 | 2.12 |
1625 | 2981 | 4.092529 | TCGACTTCTGTGAGACGTGTATAC | 59.907 | 45.833 | 0.00 | 0.00 | 36.47 | 1.47 |
1626 | 2982 | 4.092529 | GTCGACTTCTGTGAGACGTGTATA | 59.907 | 45.833 | 8.70 | 0.00 | 36.47 | 1.47 |
1630 | 2987 | 1.676057 | GTCGACTTCTGTGAGACGTG | 58.324 | 55.000 | 8.70 | 0.00 | 36.47 | 4.49 |
1632 | 2989 | 0.511653 | TCGTCGACTTCTGTGAGACG | 59.488 | 55.000 | 14.70 | 9.62 | 46.04 | 4.18 |
1638 | 2995 | 3.757493 | ACCTAGAAATCGTCGACTTCTGT | 59.243 | 43.478 | 24.88 | 14.46 | 31.91 | 3.41 |
1643 | 3000 | 4.200874 | AGATCACCTAGAAATCGTCGACT | 58.799 | 43.478 | 14.70 | 0.00 | 0.00 | 4.18 |
1644 | 3001 | 4.555348 | AGATCACCTAGAAATCGTCGAC | 57.445 | 45.455 | 5.18 | 5.18 | 0.00 | 4.20 |
1659 | 3016 | 2.989840 | CCACGTCAAGACTCAAGATCAC | 59.010 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1661 | 3018 | 1.996191 | GCCACGTCAAGACTCAAGATC | 59.004 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
1662 | 3019 | 1.344438 | TGCCACGTCAAGACTCAAGAT | 59.656 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
1663 | 3020 | 0.750249 | TGCCACGTCAAGACTCAAGA | 59.250 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1664 | 3021 | 1.800805 | ATGCCACGTCAAGACTCAAG | 58.199 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1665 | 3022 | 2.143122 | GAATGCCACGTCAAGACTCAA | 58.857 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
1666 | 3023 | 1.795768 | GAATGCCACGTCAAGACTCA | 58.204 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1667 | 3024 | 0.716108 | CGAATGCCACGTCAAGACTC | 59.284 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1668 | 3025 | 0.033504 | ACGAATGCCACGTCAAGACT | 59.966 | 50.000 | 0.00 | 0.00 | 39.87 | 3.24 |
1669 | 3026 | 0.163788 | CACGAATGCCACGTCAAGAC | 59.836 | 55.000 | 0.00 | 0.00 | 42.07 | 3.01 |
1685 | 3042 | 3.756677 | CGTCAGCGACTGCACACG | 61.757 | 66.667 | 7.03 | 3.80 | 46.23 | 4.49 |
1686 | 3043 | 2.354656 | TCGTCAGCGACTGCACAC | 60.355 | 61.111 | 7.03 | 0.00 | 46.23 | 3.82 |
1729 | 3097 | 2.039624 | ATGGACCTCAGCCCGTCT | 59.960 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
1990 | 3358 | 3.374058 | CCCATCACACCGATAAACTTGTC | 59.626 | 47.826 | 0.00 | 0.00 | 31.20 | 3.18 |
2003 | 3371 | 1.156736 | CAAACTCCGACCCATCACAC | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2063 | 3435 | 8.252417 | TCCGATGCTAAGTTATTAACACAGTAA | 58.748 | 33.333 | 9.15 | 0.37 | 0.00 | 2.24 |
2064 | 3436 | 7.774134 | TCCGATGCTAAGTTATTAACACAGTA | 58.226 | 34.615 | 9.15 | 5.31 | 0.00 | 2.74 |
2065 | 3437 | 6.636705 | TCCGATGCTAAGTTATTAACACAGT | 58.363 | 36.000 | 9.15 | 0.00 | 0.00 | 3.55 |
2066 | 3438 | 7.534085 | TTCCGATGCTAAGTTATTAACACAG | 57.466 | 36.000 | 9.15 | 6.28 | 0.00 | 3.66 |
2067 | 3439 | 6.036735 | GCTTCCGATGCTAAGTTATTAACACA | 59.963 | 38.462 | 9.15 | 2.54 | 0.00 | 3.72 |
2068 | 3440 | 6.258068 | AGCTTCCGATGCTAAGTTATTAACAC | 59.742 | 38.462 | 6.99 | 0.00 | 39.21 | 3.32 |
2069 | 3441 | 6.346096 | AGCTTCCGATGCTAAGTTATTAACA | 58.654 | 36.000 | 6.99 | 0.00 | 39.21 | 2.41 |
2070 | 3442 | 6.846325 | AGCTTCCGATGCTAAGTTATTAAC | 57.154 | 37.500 | 6.99 | 0.00 | 39.21 | 2.01 |
2072 | 3444 | 5.758296 | CCAAGCTTCCGATGCTAAGTTATTA | 59.242 | 40.000 | 9.07 | 0.00 | 40.22 | 0.98 |
2073 | 3445 | 4.576463 | CCAAGCTTCCGATGCTAAGTTATT | 59.424 | 41.667 | 9.07 | 0.00 | 40.22 | 1.40 |
2074 | 3446 | 4.130118 | CCAAGCTTCCGATGCTAAGTTAT | 58.870 | 43.478 | 9.07 | 0.00 | 40.22 | 1.89 |
2089 | 3461 | 1.228956 | TTGCTGATGCCCCAAGCTT | 60.229 | 52.632 | 0.00 | 0.00 | 44.23 | 3.74 |
2092 | 3464 | 2.056223 | CCCTTGCTGATGCCCCAAG | 61.056 | 63.158 | 0.00 | 0.00 | 38.71 | 3.61 |
2182 | 3554 | 0.786435 | AGCTCCCCCAGGTTTTGATT | 59.214 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2294 | 3666 | 1.950630 | CGCTGCACCCAACTTTTGC | 60.951 | 57.895 | 0.00 | 0.00 | 36.76 | 3.68 |
2295 | 3667 | 0.594796 | GTCGCTGCACCCAACTTTTG | 60.595 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2348 | 3720 | 7.388776 | AGCTATTGTTGTATAGTACATGCCATG | 59.611 | 37.037 | 2.40 | 2.40 | 38.68 | 3.66 |
2415 | 3798 | 4.892291 | GGGCCTCCCCCGTCCATA | 62.892 | 72.222 | 0.84 | 0.00 | 45.91 | 2.74 |
2433 | 3817 | 1.098712 | GTTCTGCACGGTTGGGTCAA | 61.099 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2447 | 3831 | 1.875514 | CCATATCGCCATGGTGTTCTG | 59.124 | 52.381 | 24.28 | 17.64 | 40.62 | 3.02 |
2454 | 3838 | 4.037803 | TGTCAAATTTCCATATCGCCATGG | 59.962 | 41.667 | 7.63 | 7.63 | 45.93 | 3.66 |
2461 | 3845 | 8.964420 | TCGTTCTTTTGTCAAATTTCCATATC | 57.036 | 30.769 | 0.00 | 0.00 | 0.00 | 1.63 |
2463 | 3847 | 8.572185 | TCATCGTTCTTTTGTCAAATTTCCATA | 58.428 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
2481 | 3865 | 4.128554 | TCTTGAGCGTTTTTCATCGTTC | 57.871 | 40.909 | 0.00 | 0.00 | 37.69 | 3.95 |
2604 | 3992 | 1.066573 | ACTACTAACAGCAGCAGCCAG | 60.067 | 52.381 | 0.00 | 0.00 | 43.56 | 4.85 |
2635 | 4023 | 3.139850 | CAAATCAATGTTGGCAGCCAAA | 58.860 | 40.909 | 29.04 | 18.35 | 45.73 | 3.28 |
2637 | 4025 | 1.002201 | CCAAATCAATGTTGGCAGCCA | 59.998 | 47.619 | 11.22 | 11.22 | 39.21 | 4.75 |
2856 | 4244 | 1.890894 | CAGGACGAGACCAACCGAT | 59.109 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
2877 | 4265 | 1.376942 | CTGTCAGAGGCAGCTTGGG | 60.377 | 63.158 | 0.00 | 0.00 | 0.00 | 4.12 |
2895 | 4283 | 7.169982 | GCCATGAGTGTAGTCTATTGTGAATAC | 59.830 | 40.741 | 0.00 | 0.00 | 37.82 | 1.89 |
2900 | 4288 | 3.798878 | CGCCATGAGTGTAGTCTATTGTG | 59.201 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
2903 | 4291 | 4.207955 | TCTCGCCATGAGTGTAGTCTATT | 58.792 | 43.478 | 0.00 | 0.00 | 45.46 | 1.73 |
2905 | 4293 | 3.277142 | TCTCGCCATGAGTGTAGTCTA | 57.723 | 47.619 | 0.00 | 0.00 | 45.46 | 2.59 |
2906 | 4294 | 2.130272 | TCTCGCCATGAGTGTAGTCT | 57.870 | 50.000 | 0.00 | 0.00 | 45.46 | 3.24 |
2920 | 4308 | 1.011968 | TTACACGTGTGGCATCTCGC | 61.012 | 55.000 | 30.83 | 0.00 | 41.28 | 5.03 |
2950 | 4343 | 5.585390 | CCACTATTCTACGTTACATTCCGT | 58.415 | 41.667 | 0.00 | 0.00 | 40.87 | 4.69 |
2966 | 4360 | 2.303163 | TTATCGCACACGCCACTATT | 57.697 | 45.000 | 0.00 | 0.00 | 39.84 | 1.73 |
2974 | 4368 | 9.735646 | AAATATAATCGTAAATTATCGCACACG | 57.264 | 29.630 | 0.00 | 0.00 | 42.01 | 4.49 |
3048 | 4450 | 7.445707 | GGAACTTCTGAACTTCATAAAACTCCT | 59.554 | 37.037 | 10.54 | 0.00 | 0.00 | 3.69 |
3052 | 4454 | 7.013369 | ACTGGGAACTTCTGAACTTCATAAAAC | 59.987 | 37.037 | 10.54 | 0.00 | 0.00 | 2.43 |
3059 | 4461 | 3.810386 | GTCACTGGGAACTTCTGAACTTC | 59.190 | 47.826 | 2.35 | 2.35 | 0.00 | 3.01 |
3060 | 4462 | 3.456277 | AGTCACTGGGAACTTCTGAACTT | 59.544 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
3063 | 4469 | 3.454447 | TCAAGTCACTGGGAACTTCTGAA | 59.546 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
3097 | 4503 | 8.654094 | AGAAGGAAATTTGTTTCATGGAAGAAT | 58.346 | 29.630 | 0.00 | 0.00 | 32.77 | 2.40 |
3100 | 4506 | 6.583806 | CGAGAAGGAAATTTGTTTCATGGAAG | 59.416 | 38.462 | 0.00 | 0.00 | 32.77 | 3.46 |
3102 | 4508 | 5.767665 | TCGAGAAGGAAATTTGTTTCATGGA | 59.232 | 36.000 | 0.00 | 0.00 | 32.77 | 3.41 |
3104 | 4510 | 8.524870 | AAATCGAGAAGGAAATTTGTTTCATG | 57.475 | 30.769 | 0.00 | 0.00 | 32.77 | 3.07 |
3115 | 4521 | 8.173130 | GCTTCGTTAATAAAATCGAGAAGGAAA | 58.827 | 33.333 | 0.00 | 0.00 | 35.66 | 3.13 |
3117 | 4523 | 6.257193 | GGCTTCGTTAATAAAATCGAGAAGGA | 59.743 | 38.462 | 0.00 | 0.00 | 35.66 | 3.36 |
3123 | 4529 | 4.034742 | GCCTGGCTTCGTTAATAAAATCGA | 59.965 | 41.667 | 12.43 | 0.00 | 0.00 | 3.59 |
3130 | 4536 | 5.186942 | TGTAAATGCCTGGCTTCGTTAATA | 58.813 | 37.500 | 21.03 | 0.00 | 0.00 | 0.98 |
3133 | 4539 | 3.006940 | CTGTAAATGCCTGGCTTCGTTA | 58.993 | 45.455 | 21.03 | 7.36 | 0.00 | 3.18 |
3134 | 4540 | 1.812571 | CTGTAAATGCCTGGCTTCGTT | 59.187 | 47.619 | 21.03 | 8.35 | 0.00 | 3.85 |
3138 | 4544 | 1.180029 | CTGCTGTAAATGCCTGGCTT | 58.820 | 50.000 | 21.03 | 11.16 | 0.00 | 4.35 |
3141 | 4547 | 1.669999 | GGCCTGCTGTAAATGCCTGG | 61.670 | 60.000 | 0.00 | 0.00 | 39.05 | 4.45 |
3144 | 4550 | 1.257055 | TTGGGCCTGCTGTAAATGCC | 61.257 | 55.000 | 4.53 | 0.00 | 41.42 | 4.40 |
3146 | 4552 | 2.562298 | TCTTTTGGGCCTGCTGTAAATG | 59.438 | 45.455 | 4.53 | 0.00 | 0.00 | 2.32 |
3151 | 4557 | 0.613012 | GGATCTTTTGGGCCTGCTGT | 60.613 | 55.000 | 4.53 | 0.00 | 0.00 | 4.40 |
3154 | 4560 | 3.068729 | GCGGATCTTTTGGGCCTGC | 62.069 | 63.158 | 4.53 | 0.00 | 0.00 | 4.85 |
3170 | 4576 | 2.450160 | AGAGCACGTTTTCTTTTTGCG | 58.550 | 42.857 | 0.00 | 0.00 | 38.26 | 4.85 |
3172 | 4578 | 5.499176 | GCAAAGAGAGCACGTTTTCTTTTTG | 60.499 | 40.000 | 23.86 | 23.86 | 43.17 | 2.44 |
3177 | 4583 | 2.288666 | TGCAAAGAGAGCACGTTTTCT | 58.711 | 42.857 | 0.00 | 0.00 | 37.02 | 2.52 |
3178 | 4584 | 2.755836 | TGCAAAGAGAGCACGTTTTC | 57.244 | 45.000 | 0.00 | 0.00 | 37.02 | 2.29 |
3183 | 4589 | 1.659601 | CTCTGATGCAAAGAGAGCACG | 59.340 | 52.381 | 20.02 | 0.00 | 45.95 | 5.34 |
3187 | 4593 | 2.765135 | TCCTCCTCTGATGCAAAGAGAG | 59.235 | 50.000 | 24.30 | 17.90 | 43.27 | 3.20 |
3188 | 4594 | 2.825223 | TCCTCCTCTGATGCAAAGAGA | 58.175 | 47.619 | 24.30 | 10.83 | 43.27 | 3.10 |
3193 | 4599 | 4.040047 | TCCTAATTCCTCCTCTGATGCAA | 58.960 | 43.478 | 0.00 | 0.00 | 0.00 | 4.08 |
3195 | 4601 | 4.696479 | TTCCTAATTCCTCCTCTGATGC | 57.304 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
3206 | 4612 | 1.804601 | CGGGCGGTATTCCTAATTCC | 58.195 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3221 | 4627 | 1.078143 | ATTTCACTCTCCTGCGGGC | 60.078 | 57.895 | 6.73 | 0.00 | 0.00 | 6.13 |
3222 | 4628 | 0.250234 | TGATTTCACTCTCCTGCGGG | 59.750 | 55.000 | 4.71 | 4.71 | 0.00 | 6.13 |
3223 | 4629 | 1.338105 | TGTGATTTCACTCTCCTGCGG | 60.338 | 52.381 | 11.67 | 0.00 | 46.55 | 5.69 |
3224 | 4630 | 2.084610 | TGTGATTTCACTCTCCTGCG | 57.915 | 50.000 | 11.67 | 0.00 | 46.55 | 5.18 |
3225 | 4631 | 2.606725 | CGATGTGATTTCACTCTCCTGC | 59.393 | 50.000 | 11.67 | 0.00 | 46.55 | 4.85 |
3226 | 4632 | 3.193263 | CCGATGTGATTTCACTCTCCTG | 58.807 | 50.000 | 11.67 | 0.17 | 46.55 | 3.86 |
3227 | 4633 | 2.419297 | GCCGATGTGATTTCACTCTCCT | 60.419 | 50.000 | 11.67 | 0.00 | 46.55 | 3.69 |
3228 | 4634 | 1.936547 | GCCGATGTGATTTCACTCTCC | 59.063 | 52.381 | 11.67 | 0.00 | 46.55 | 3.71 |
3229 | 4635 | 1.936547 | GGCCGATGTGATTTCACTCTC | 59.063 | 52.381 | 11.67 | 7.70 | 46.55 | 3.20 |
3230 | 4636 | 1.556911 | AGGCCGATGTGATTTCACTCT | 59.443 | 47.619 | 11.67 | 0.00 | 46.55 | 3.24 |
3231 | 4637 | 2.029838 | AGGCCGATGTGATTTCACTC | 57.970 | 50.000 | 11.67 | 6.27 | 46.55 | 3.51 |
3232 | 4638 | 2.290260 | TGAAGGCCGATGTGATTTCACT | 60.290 | 45.455 | 11.67 | 0.00 | 46.55 | 3.41 |
3233 | 4639 | 2.083774 | TGAAGGCCGATGTGATTTCAC | 58.916 | 47.619 | 0.00 | 3.72 | 46.59 | 3.18 |
3234 | 4640 | 2.488204 | TGAAGGCCGATGTGATTTCA | 57.512 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3235 | 4641 | 2.684881 | ACATGAAGGCCGATGTGATTTC | 59.315 | 45.455 | 14.98 | 4.09 | 31.47 | 2.17 |
3236 | 4642 | 2.726821 | ACATGAAGGCCGATGTGATTT | 58.273 | 42.857 | 14.98 | 0.00 | 31.47 | 2.17 |
3237 | 4643 | 2.425143 | ACATGAAGGCCGATGTGATT | 57.575 | 45.000 | 14.98 | 0.00 | 31.47 | 2.57 |
3238 | 4644 | 2.435805 | ACTACATGAAGGCCGATGTGAT | 59.564 | 45.455 | 21.65 | 10.97 | 34.60 | 3.06 |
3239 | 4645 | 1.831106 | ACTACATGAAGGCCGATGTGA | 59.169 | 47.619 | 21.65 | 9.74 | 34.60 | 3.58 |
3240 | 4646 | 2.315925 | ACTACATGAAGGCCGATGTG | 57.684 | 50.000 | 21.65 | 15.54 | 34.60 | 3.21 |
3241 | 4647 | 2.632377 | CAACTACATGAAGGCCGATGT | 58.368 | 47.619 | 18.42 | 18.42 | 36.72 | 3.06 |
3242 | 4648 | 1.942657 | CCAACTACATGAAGGCCGATG | 59.057 | 52.381 | 0.00 | 10.03 | 0.00 | 3.84 |
3243 | 4649 | 1.559682 | ACCAACTACATGAAGGCCGAT | 59.440 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
3244 | 4650 | 0.981183 | ACCAACTACATGAAGGCCGA | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
3245 | 4651 | 1.086696 | CACCAACTACATGAAGGCCG | 58.913 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3246 | 4652 | 0.811281 | GCACCAACTACATGAAGGCC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
3247 | 4653 | 0.811281 | GGCACCAACTACATGAAGGC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3280 | 4686 | 4.522789 | AGGTAGCAACAAAGGTGGTTTATG | 59.477 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
3285 | 4691 | 1.202891 | GGAGGTAGCAACAAAGGTGGT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
3293 | 4699 | 3.130734 | AGATTAGGGGAGGTAGCAACA | 57.869 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
3294 | 4700 | 3.712218 | AGAAGATTAGGGGAGGTAGCAAC | 59.288 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
3295 | 4701 | 4.008916 | AGAAGATTAGGGGAGGTAGCAA | 57.991 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
3296 | 4702 | 3.708236 | AGAAGATTAGGGGAGGTAGCA | 57.292 | 47.619 | 0.00 | 0.00 | 0.00 | 3.49 |
3317 | 4723 | 7.094032 | GGATGAAAGGTTCTTCAACAATGATCT | 60.094 | 37.037 | 0.00 | 0.00 | 38.75 | 2.75 |
3318 | 4724 | 7.031975 | GGATGAAAGGTTCTTCAACAATGATC | 58.968 | 38.462 | 6.31 | 0.00 | 38.75 | 2.92 |
3329 | 4735 | 5.325239 | CCCTAAAGTGGATGAAAGGTTCTT | 58.675 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
3330 | 4736 | 4.811063 | GCCCTAAAGTGGATGAAAGGTTCT | 60.811 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
3340 | 4746 | 2.492025 | TGGAGATGCCCTAAAGTGGAT | 58.508 | 47.619 | 0.00 | 0.00 | 34.97 | 3.41 |
3343 | 4749 | 2.009774 | CGTTGGAGATGCCCTAAAGTG | 58.990 | 52.381 | 0.00 | 0.00 | 34.97 | 3.16 |
3344 | 4750 | 1.679032 | GCGTTGGAGATGCCCTAAAGT | 60.679 | 52.381 | 0.00 | 0.00 | 34.03 | 2.66 |
3352 | 4758 | 3.195698 | GGACGGCGTTGGAGATGC | 61.196 | 66.667 | 16.19 | 0.00 | 39.65 | 3.91 |
3353 | 4759 | 2.511600 | GGGACGGCGTTGGAGATG | 60.512 | 66.667 | 16.19 | 0.00 | 0.00 | 2.90 |
3354 | 4760 | 2.683933 | AGGGACGGCGTTGGAGAT | 60.684 | 61.111 | 16.19 | 0.00 | 0.00 | 2.75 |
3355 | 4761 | 3.379445 | GAGGGACGGCGTTGGAGA | 61.379 | 66.667 | 16.19 | 0.00 | 0.00 | 3.71 |
3356 | 4762 | 2.725203 | TTTGAGGGACGGCGTTGGAG | 62.725 | 60.000 | 16.19 | 0.00 | 0.00 | 3.86 |
3357 | 4763 | 2.809307 | TTTGAGGGACGGCGTTGGA | 61.809 | 57.895 | 16.19 | 0.00 | 0.00 | 3.53 |
3358 | 4764 | 2.281208 | TTTGAGGGACGGCGTTGG | 60.281 | 61.111 | 16.19 | 0.00 | 0.00 | 3.77 |
3359 | 4765 | 2.613506 | GGTTTGAGGGACGGCGTTG | 61.614 | 63.158 | 16.19 | 0.00 | 0.00 | 4.10 |
3360 | 4766 | 2.281276 | GGTTTGAGGGACGGCGTT | 60.281 | 61.111 | 16.19 | 0.00 | 0.00 | 4.84 |
3361 | 4767 | 3.552384 | TGGTTTGAGGGACGGCGT | 61.552 | 61.111 | 14.65 | 14.65 | 0.00 | 5.68 |
3362 | 4768 | 3.047877 | GTGGTTTGAGGGACGGCG | 61.048 | 66.667 | 4.80 | 4.80 | 0.00 | 6.46 |
3363 | 4769 | 2.671963 | GGTGGTTTGAGGGACGGC | 60.672 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
3364 | 4770 | 1.302511 | CAGGTGGTTTGAGGGACGG | 60.303 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
3365 | 4771 | 1.966451 | GCAGGTGGTTTGAGGGACG | 60.966 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
3366 | 4772 | 0.251341 | ATGCAGGTGGTTTGAGGGAC | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3367 | 4773 | 0.251297 | CATGCAGGTGGTTTGAGGGA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3368 | 4774 | 0.251297 | TCATGCAGGTGGTTTGAGGG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3369 | 4775 | 1.619654 | TTCATGCAGGTGGTTTGAGG | 58.380 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3370 | 4776 | 3.226346 | CATTCATGCAGGTGGTTTGAG | 57.774 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
3392 | 4798 | 0.516877 | TCGATATAACCCCGCGTACG | 59.483 | 55.000 | 11.84 | 11.84 | 39.67 | 3.67 |
3393 | 4799 | 2.478539 | GGATCGATATAACCCCGCGTAC | 60.479 | 54.545 | 4.92 | 0.00 | 0.00 | 3.67 |
3394 | 4800 | 1.745087 | GGATCGATATAACCCCGCGTA | 59.255 | 52.381 | 4.92 | 0.00 | 0.00 | 4.42 |
3395 | 4801 | 0.529378 | GGATCGATATAACCCCGCGT | 59.471 | 55.000 | 4.92 | 0.00 | 0.00 | 6.01 |
3396 | 4802 | 0.815734 | AGGATCGATATAACCCCGCG | 59.184 | 55.000 | 0.00 | 0.00 | 0.00 | 6.46 |
3397 | 4803 | 2.100989 | AGAGGATCGATATAACCCCGC | 58.899 | 52.381 | 0.00 | 0.00 | 42.67 | 6.13 |
3398 | 4804 | 3.353557 | TCAGAGGATCGATATAACCCCG | 58.646 | 50.000 | 0.00 | 0.00 | 42.67 | 5.73 |
3399 | 4805 | 4.345854 | ACTCAGAGGATCGATATAACCCC | 58.654 | 47.826 | 0.00 | 0.00 | 42.67 | 4.95 |
3400 | 4806 | 6.039941 | CCATACTCAGAGGATCGATATAACCC | 59.960 | 46.154 | 0.00 | 0.00 | 42.67 | 4.11 |
3401 | 4807 | 6.829298 | TCCATACTCAGAGGATCGATATAACC | 59.171 | 42.308 | 0.00 | 0.00 | 42.67 | 2.85 |
3402 | 4808 | 7.337184 | TGTCCATACTCAGAGGATCGATATAAC | 59.663 | 40.741 | 0.00 | 0.00 | 42.67 | 1.89 |
3403 | 4809 | 7.337184 | GTGTCCATACTCAGAGGATCGATATAA | 59.663 | 40.741 | 0.00 | 0.00 | 42.67 | 0.98 |
3404 | 4810 | 6.824196 | GTGTCCATACTCAGAGGATCGATATA | 59.176 | 42.308 | 0.00 | 0.00 | 42.67 | 0.86 |
3405 | 4811 | 5.650266 | GTGTCCATACTCAGAGGATCGATAT | 59.350 | 44.000 | 0.00 | 0.00 | 42.67 | 1.63 |
3406 | 4812 | 5.004448 | GTGTCCATACTCAGAGGATCGATA | 58.996 | 45.833 | 0.00 | 0.00 | 42.67 | 2.92 |
3407 | 4813 | 3.823873 | GTGTCCATACTCAGAGGATCGAT | 59.176 | 47.826 | 0.00 | 0.00 | 42.67 | 3.59 |
3408 | 4814 | 3.215151 | GTGTCCATACTCAGAGGATCGA | 58.785 | 50.000 | 1.53 | 0.00 | 42.67 | 3.59 |
3409 | 4815 | 2.952310 | TGTGTCCATACTCAGAGGATCG | 59.048 | 50.000 | 1.53 | 0.00 | 42.67 | 3.69 |
3410 | 4816 | 3.957497 | AGTGTGTCCATACTCAGAGGATC | 59.043 | 47.826 | 1.53 | 0.00 | 33.33 | 3.36 |
3411 | 4817 | 3.987745 | AGTGTGTCCATACTCAGAGGAT | 58.012 | 45.455 | 1.53 | 0.00 | 33.33 | 3.24 |
3412 | 4818 | 3.458044 | AGTGTGTCCATACTCAGAGGA | 57.542 | 47.619 | 1.53 | 0.00 | 30.14 | 3.71 |
3413 | 4819 | 4.543590 | AAAGTGTGTCCATACTCAGAGG | 57.456 | 45.455 | 1.53 | 0.00 | 31.29 | 3.69 |
3414 | 4820 | 5.409826 | GGAAAAAGTGTGTCCATACTCAGAG | 59.590 | 44.000 | 0.00 | 0.00 | 31.29 | 3.35 |
3415 | 4821 | 5.305585 | GGAAAAAGTGTGTCCATACTCAGA | 58.694 | 41.667 | 0.00 | 0.00 | 31.29 | 3.27 |
3416 | 4822 | 4.455877 | GGGAAAAAGTGTGTCCATACTCAG | 59.544 | 45.833 | 0.00 | 0.00 | 31.29 | 3.35 |
3417 | 4823 | 4.394729 | GGGAAAAAGTGTGTCCATACTCA | 58.605 | 43.478 | 0.00 | 0.00 | 31.29 | 3.41 |
3418 | 4824 | 3.435671 | CGGGAAAAAGTGTGTCCATACTC | 59.564 | 47.826 | 0.00 | 0.00 | 31.29 | 2.59 |
3419 | 4825 | 3.408634 | CGGGAAAAAGTGTGTCCATACT | 58.591 | 45.455 | 0.00 | 0.00 | 34.07 | 2.12 |
3420 | 4826 | 2.095415 | GCGGGAAAAAGTGTGTCCATAC | 60.095 | 50.000 | 0.00 | 0.00 | 32.70 | 2.39 |
3421 | 4827 | 2.156098 | GCGGGAAAAAGTGTGTCCATA | 58.844 | 47.619 | 0.00 | 0.00 | 32.70 | 2.74 |
3422 | 4828 | 0.958822 | GCGGGAAAAAGTGTGTCCAT | 59.041 | 50.000 | 0.00 | 0.00 | 32.70 | 3.41 |
3423 | 4829 | 0.394488 | TGCGGGAAAAAGTGTGTCCA | 60.394 | 50.000 | 0.00 | 0.00 | 32.70 | 4.02 |
3424 | 4830 | 0.741915 | TTGCGGGAAAAAGTGTGTCC | 59.258 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3425 | 4831 | 2.570442 | TTTGCGGGAAAAAGTGTGTC | 57.430 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3791 | 5197 | 4.030216 | GGATTGGAAGAAAATAGGCCCAA | 58.970 | 43.478 | 0.00 | 0.00 | 37.96 | 4.12 |
3792 | 5198 | 3.012274 | TGGATTGGAAGAAAATAGGCCCA | 59.988 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
3793 | 5199 | 3.384789 | GTGGATTGGAAGAAAATAGGCCC | 59.615 | 47.826 | 0.00 | 0.00 | 0.00 | 5.80 |
3794 | 5200 | 3.384789 | GGTGGATTGGAAGAAAATAGGCC | 59.615 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
3795 | 5201 | 3.384789 | GGGTGGATTGGAAGAAAATAGGC | 59.615 | 47.826 | 0.00 | 0.00 | 0.00 | 3.93 |
3796 | 5202 | 3.960755 | GGGGTGGATTGGAAGAAAATAGG | 59.039 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
3797 | 5203 | 4.871822 | AGGGGTGGATTGGAAGAAAATAG | 58.128 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
3798 | 5204 | 4.965283 | AGGGGTGGATTGGAAGAAAATA | 57.035 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
3799 | 5205 | 3.852858 | AGGGGTGGATTGGAAGAAAAT | 57.147 | 42.857 | 0.00 | 0.00 | 0.00 | 1.82 |
3800 | 5206 | 3.142028 | AGAAGGGGTGGATTGGAAGAAAA | 59.858 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
3801 | 5207 | 2.721906 | AGAAGGGGTGGATTGGAAGAAA | 59.278 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
3802 | 5208 | 2.308866 | GAGAAGGGGTGGATTGGAAGAA | 59.691 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3803 | 5209 | 1.916181 | GAGAAGGGGTGGATTGGAAGA | 59.084 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
3804 | 5210 | 1.918957 | AGAGAAGGGGTGGATTGGAAG | 59.081 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
3805 | 5211 | 1.916181 | GAGAGAAGGGGTGGATTGGAA | 59.084 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
3806 | 5212 | 1.584724 | GAGAGAAGGGGTGGATTGGA | 58.415 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3807 | 5213 | 0.548510 | GGAGAGAAGGGGTGGATTGG | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3808 | 5214 | 0.548510 | GGGAGAGAAGGGGTGGATTG | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3809 | 5215 | 0.624795 | GGGGAGAGAAGGGGTGGATT | 60.625 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3810 | 5216 | 1.004891 | GGGGAGAGAAGGGGTGGAT | 59.995 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
3811 | 5217 | 1.761780 | AAGGGGAGAGAAGGGGTGGA | 61.762 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3812 | 5218 | 1.229984 | AAGGGGAGAGAAGGGGTGG | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
3813 | 5219 | 1.994463 | CAAGGGGAGAGAAGGGGTG | 59.006 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
3814 | 5220 | 1.925972 | GCAAGGGGAGAGAAGGGGT | 60.926 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
3815 | 5221 | 1.210885 | AAGCAAGGGGAGAGAAGGGG | 61.211 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3816 | 5222 | 0.701147 | AAAGCAAGGGGAGAGAAGGG | 59.299 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3817 | 5223 | 1.831580 | CAAAGCAAGGGGAGAGAAGG | 58.168 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3818 | 5224 | 1.172175 | GCAAAGCAAGGGGAGAGAAG | 58.828 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3819 | 5225 | 0.478072 | TGCAAAGCAAGGGGAGAGAA | 59.522 | 50.000 | 0.00 | 0.00 | 34.76 | 2.87 |
3820 | 5226 | 0.700564 | ATGCAAAGCAAGGGGAGAGA | 59.299 | 50.000 | 0.00 | 0.00 | 43.62 | 3.10 |
3821 | 5227 | 1.101331 | GATGCAAAGCAAGGGGAGAG | 58.899 | 55.000 | 0.00 | 0.00 | 43.62 | 3.20 |
3822 | 5228 | 0.323725 | GGATGCAAAGCAAGGGGAGA | 60.324 | 55.000 | 0.00 | 0.00 | 43.62 | 3.71 |
3823 | 5229 | 1.660560 | CGGATGCAAAGCAAGGGGAG | 61.661 | 60.000 | 0.00 | 0.00 | 43.62 | 4.30 |
3824 | 5230 | 1.678635 | CGGATGCAAAGCAAGGGGA | 60.679 | 57.895 | 0.00 | 0.00 | 43.62 | 4.81 |
3825 | 5231 | 2.887360 | CGGATGCAAAGCAAGGGG | 59.113 | 61.111 | 0.00 | 0.00 | 43.62 | 4.79 |
3826 | 5232 | 2.182537 | GCGGATGCAAAGCAAGGG | 59.817 | 61.111 | 0.00 | 0.00 | 43.62 | 3.95 |
3836 | 5242 | 4.554036 | GGAGGAGGGTGCGGATGC | 62.554 | 72.222 | 0.00 | 0.00 | 43.20 | 3.91 |
3837 | 5243 | 2.765807 | AGGAGGAGGGTGCGGATG | 60.766 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3838 | 5244 | 2.444895 | GAGGAGGAGGGTGCGGAT | 60.445 | 66.667 | 0.00 | 0.00 | 0.00 | 4.18 |
3839 | 5245 | 4.779733 | GGAGGAGGAGGGTGCGGA | 62.780 | 72.222 | 0.00 | 0.00 | 0.00 | 5.54 |
3843 | 5249 | 2.128507 | GTAGCGGAGGAGGAGGGTG | 61.129 | 68.421 | 0.00 | 0.00 | 0.00 | 4.61 |
3844 | 5250 | 2.279408 | GTAGCGGAGGAGGAGGGT | 59.721 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
3845 | 5251 | 2.522193 | GGTAGCGGAGGAGGAGGG | 60.522 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
3846 | 5252 | 2.907917 | CGGTAGCGGAGGAGGAGG | 60.908 | 72.222 | 6.39 | 0.00 | 0.00 | 4.30 |
3847 | 5253 | 3.597728 | GCGGTAGCGGAGGAGGAG | 61.598 | 72.222 | 17.08 | 0.00 | 0.00 | 3.69 |
3850 | 5256 | 4.208686 | GTGGCGGTAGCGGAGGAG | 62.209 | 72.222 | 17.08 | 0.00 | 46.35 | 3.69 |
3851 | 5257 | 4.753662 | AGTGGCGGTAGCGGAGGA | 62.754 | 66.667 | 17.08 | 0.00 | 46.35 | 3.71 |
3852 | 5258 | 4.208686 | GAGTGGCGGTAGCGGAGG | 62.209 | 72.222 | 17.08 | 0.00 | 46.35 | 4.30 |
3853 | 5259 | 1.822613 | TAGAGTGGCGGTAGCGGAG | 60.823 | 63.158 | 17.08 | 0.00 | 46.35 | 4.63 |
3854 | 5260 | 2.117156 | GTAGAGTGGCGGTAGCGGA | 61.117 | 63.158 | 17.08 | 0.00 | 46.35 | 5.54 |
3855 | 5261 | 2.412112 | GTAGAGTGGCGGTAGCGG | 59.588 | 66.667 | 17.08 | 0.00 | 46.35 | 5.52 |
3856 | 5262 | 2.061182 | GAGGTAGAGTGGCGGTAGCG | 62.061 | 65.000 | 10.57 | 10.57 | 46.35 | 4.26 |
3857 | 5263 | 0.752376 | AGAGGTAGAGTGGCGGTAGC | 60.752 | 60.000 | 0.00 | 0.00 | 44.18 | 3.58 |
3858 | 5264 | 1.310904 | GAGAGGTAGAGTGGCGGTAG | 58.689 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3859 | 5265 | 0.106819 | GGAGAGGTAGAGTGGCGGTA | 60.107 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3860 | 5266 | 1.380112 | GGAGAGGTAGAGTGGCGGT | 60.380 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
3861 | 5267 | 2.482333 | CGGAGAGGTAGAGTGGCGG | 61.482 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
3862 | 5268 | 3.111939 | CGGAGAGGTAGAGTGGCG | 58.888 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
3863 | 5269 | 2.787567 | GGCGGAGAGGTAGAGTGGC | 61.788 | 68.421 | 0.00 | 0.00 | 0.00 | 5.01 |
3864 | 5270 | 2.128507 | GGGCGGAGAGGTAGAGTGG | 61.129 | 68.421 | 0.00 | 0.00 | 0.00 | 4.00 |
3865 | 5271 | 0.970937 | TTGGGCGGAGAGGTAGAGTG | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3866 | 5272 | 0.971447 | GTTGGGCGGAGAGGTAGAGT | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 3.24 |
3867 | 5273 | 1.817209 | GTTGGGCGGAGAGGTAGAG | 59.183 | 63.158 | 0.00 | 0.00 | 0.00 | 2.43 |
3868 | 5274 | 2.050350 | CGTTGGGCGGAGAGGTAGA | 61.050 | 63.158 | 0.00 | 0.00 | 36.85 | 2.59 |
3869 | 5275 | 2.494918 | CGTTGGGCGGAGAGGTAG | 59.505 | 66.667 | 0.00 | 0.00 | 36.85 | 3.18 |
3870 | 5276 | 3.766691 | GCGTTGGGCGGAGAGGTA | 61.767 | 66.667 | 0.00 | 0.00 | 41.69 | 3.08 |
3884 | 5290 | 4.118995 | CCGGCAATGCATGTGCGT | 62.119 | 61.111 | 20.23 | 0.00 | 45.83 | 5.24 |
3885 | 5291 | 3.813143 | TCCGGCAATGCATGTGCG | 61.813 | 61.111 | 20.23 | 16.45 | 45.83 | 5.34 |
3886 | 5292 | 2.202650 | GTCCGGCAATGCATGTGC | 60.203 | 61.111 | 19.37 | 19.37 | 41.45 | 4.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.