Multiple sequence alignment - TraesCS3B01G432200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G432200 chr3B 100.000 5582 0 0 1 5582 671265598 671271179 0.000000e+00 10309.0
1 TraesCS3B01G432200 chr3B 83.356 751 78 22 4231 4974 671287006 671287716 0.000000e+00 651.0
2 TraesCS3B01G432200 chr3B 79.108 493 86 11 96 585 47187613 47187135 1.940000e-84 324.0
3 TraesCS3B01G432200 chr3B 91.703 229 15 4 5339 5565 691274346 691274120 1.170000e-81 315.0
4 TraesCS3B01G432200 chr3B 81.507 292 25 9 5073 5343 671288168 671288451 4.380000e-51 213.0
5 TraesCS3B01G432200 chr3B 81.481 189 24 4 95 282 25414677 25414499 1.620000e-30 145.0
6 TraesCS3B01G432200 chr3A 93.431 2664 89 33 2344 4975 646270643 646273252 0.000000e+00 3871.0
7 TraesCS3B01G432200 chr3A 92.529 763 43 8 955 1704 646269283 646270044 0.000000e+00 1081.0
8 TraesCS3B01G432200 chr3A 88.339 566 55 3 1723 2286 646270100 646270656 0.000000e+00 669.0
9 TraesCS3B01G432200 chr3A 92.544 228 14 3 5339 5565 658713561 658713336 1.940000e-84 324.0
10 TraesCS3B01G432200 chr3A 90.517 232 19 3 5029 5257 646273261 646273492 2.530000e-78 303.0
11 TraesCS3B01G432200 chr3D 92.007 1689 77 21 664 2343 508397696 508399335 0.000000e+00 2318.0
12 TraesCS3B01G432200 chr3D 95.636 1375 48 8 3241 4605 508401328 508402700 0.000000e+00 2196.0
13 TraesCS3B01G432200 chr3D 95.114 921 27 4 2343 3246 508399365 508400284 0.000000e+00 1435.0
14 TraesCS3B01G432200 chr3D 92.829 251 16 1 4231 4481 508428736 508428984 4.110000e-96 363.0
15 TraesCS3B01G432200 chr3D 88.732 284 31 1 348 630 508397410 508397693 4.140000e-91 346.0
16 TraesCS3B01G432200 chr3D 91.266 229 16 4 5339 5565 523814383 523814157 5.430000e-80 309.0
17 TraesCS3B01G432200 chr3D 89.302 215 19 2 1 211 508397194 508397408 3.320000e-67 267.0
18 TraesCS3B01G432200 chr3D 82.958 311 23 12 4671 4964 508402715 508403012 2.580000e-63 254.0
19 TraesCS3B01G432200 chr6B 78.384 495 89 12 100 586 567755408 567754924 7.030000e-79 305.0
20 TraesCS3B01G432200 chr6B 82.609 230 36 4 203 429 567715121 567715349 3.410000e-47 200.0
21 TraesCS3B01G432200 chr6B 85.217 115 17 0 489 603 337837040 337836926 9.820000e-23 119.0
22 TraesCS3B01G432200 chr6B 95.000 60 3 0 2284 2343 662098271 662098330 1.660000e-15 95.3
23 TraesCS3B01G432200 chr5D 77.969 522 81 20 95 609 438191936 438192430 4.230000e-76 296.0
24 TraesCS3B01G432200 chr6D 76.494 502 85 23 89 584 248079791 248080265 5.590000e-60 243.0
25 TraesCS3B01G432200 chr6D 82.707 133 23 0 471 603 249954815 249954683 9.820000e-23 119.0
26 TraesCS3B01G432200 chr1D 78.512 363 50 16 97 449 8619805 8620149 4.380000e-51 213.0
27 TraesCS3B01G432200 chr5B 74.941 427 96 9 2578 2995 179785812 179785388 9.550000e-43 185.0
28 TraesCS3B01G432200 chr5B 91.525 59 5 0 2286 2344 217592208 217592150 1.290000e-11 82.4
29 TraesCS3B01G432200 chr5B 91.525 59 5 0 2286 2344 217608328 217608270 1.290000e-11 82.4
30 TraesCS3B01G432200 chr5B 85.915 71 8 2 2275 2343 571529244 571529314 2.160000e-09 75.0
31 TraesCS3B01G432200 chr1A 78.723 282 49 5 88 368 108755263 108754992 1.600000e-40 178.0
32 TraesCS3B01G432200 chr6A 81.379 145 27 0 456 600 346598204 346598348 9.820000e-23 119.0
33 TraesCS3B01G432200 chr6A 90.000 60 6 0 2285 2344 585505175 585505234 1.670000e-10 78.7
34 TraesCS3B01G432200 chr2D 93.220 59 4 0 2284 2342 203045029 203044971 2.770000e-13 87.9
35 TraesCS3B01G432200 chr2A 91.525 59 5 0 2285 2343 231355035 231354977 1.290000e-11 82.4
36 TraesCS3B01G432200 chr4B 95.918 49 2 0 2295 2343 643790565 643790613 4.640000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G432200 chr3B 671265598 671271179 5581 False 10309 10309 100.000000 1 5582 1 chr3B.!!$F1 5581
1 TraesCS3B01G432200 chr3B 671287006 671288451 1445 False 432 651 82.431500 4231 5343 2 chr3B.!!$F2 1112
2 TraesCS3B01G432200 chr3A 646269283 646273492 4209 False 1481 3871 91.204000 955 5257 4 chr3A.!!$F1 4302
3 TraesCS3B01G432200 chr3D 508397194 508403012 5818 False 1136 2318 90.624833 1 4964 6 chr3D.!!$F2 4963

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
246 251 0.317186 GAGCCGAGCTAGCGAGTTAC 60.317 60.0 9.55 0.0 39.88 2.50 F
1220 1242 0.099082 CGGTCGAGGACAAGCTAGAC 59.901 60.0 0.00 0.0 33.68 2.59 F
1576 1602 0.371645 GCTGTGCCTTTCGAAGATCG 59.628 55.0 0.00 0.0 42.10 3.69 F
2256 2324 0.815734 TGTAGCTCTACGGCCTGAAC 59.184 55.0 0.00 0.0 38.85 3.18 F
3983 5161 0.183492 TGTGCTTCCAACTCTTGCCT 59.817 50.0 0.00 0.0 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1859 1925 0.107945 CTTCACCTCTAGGGCAGCAC 60.108 60.0 0.20 0.00 40.27 4.40 R
2157 2225 0.521291 GTCAAGCAATGCCACGCTTA 59.479 50.0 0.00 0.00 46.47 3.09 R
2529 2627 0.961019 TACTGCAAAAGCAGCTTGGG 59.039 50.0 16.62 5.15 41.12 4.12 R
3994 5172 2.355756 CACATAATCCTCAACCTTGGCG 59.644 50.0 0.00 0.00 0.00 5.69 R
5273 6932 1.317613 TGACATTTGGACAGGCACAC 58.682 50.0 0.00 0.00 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.359850 TCGATGGTTGCACCTGGC 60.360 61.111 0.00 0.00 39.58 4.85
37 38 3.032609 CCTGGCGATCGCGATGTC 61.033 66.667 31.76 19.84 43.06 3.06
114 115 6.959639 TGAGCTGGAATTTTACTTGAAACT 57.040 33.333 0.00 0.00 0.00 2.66
117 118 4.617223 GCTGGAATTTTACTTGAAACTCGC 59.383 41.667 0.00 0.00 0.00 5.03
127 128 1.057636 TGAAACTCGCGAGCTAAACG 58.942 50.000 34.83 12.02 0.00 3.60
150 151 0.678395 AGCTCATGATTCGGCTCGAT 59.322 50.000 0.00 0.00 35.23 3.59
152 153 1.869767 GCTCATGATTCGGCTCGATTT 59.130 47.619 0.00 0.00 35.23 2.17
190 195 0.387929 AACGAGTTGAGCCGAGTCAA 59.612 50.000 0.00 0.00 33.95 3.18
204 209 3.124297 CCGAGTCAACTTTTGATCTGAGC 59.876 47.826 0.00 0.00 42.47 4.26
207 212 3.993081 AGTCAACTTTTGATCTGAGCTCG 59.007 43.478 9.64 4.19 42.47 5.03
211 216 5.989168 TCAACTTTTGATCTGAGCTCGTTAA 59.011 36.000 9.64 0.00 34.08 2.01
212 217 5.847670 ACTTTTGATCTGAGCTCGTTAAC 57.152 39.130 9.64 0.00 0.00 2.01
213 218 5.297547 ACTTTTGATCTGAGCTCGTTAACA 58.702 37.500 9.64 2.93 0.00 2.41
214 219 5.934625 ACTTTTGATCTGAGCTCGTTAACAT 59.065 36.000 9.64 0.00 0.00 2.71
215 220 7.097192 ACTTTTGATCTGAGCTCGTTAACATA 58.903 34.615 9.64 0.00 0.00 2.29
216 221 7.602644 ACTTTTGATCTGAGCTCGTTAACATAA 59.397 33.333 9.64 6.39 0.00 1.90
217 222 6.887376 TTGATCTGAGCTCGTTAACATAAC 57.113 37.500 9.64 0.00 0.00 1.89
218 223 5.961272 TGATCTGAGCTCGTTAACATAACA 58.039 37.500 9.64 0.00 0.00 2.41
219 224 6.394809 TGATCTGAGCTCGTTAACATAACAA 58.605 36.000 9.64 0.00 0.00 2.83
220 225 6.531594 TGATCTGAGCTCGTTAACATAACAAG 59.468 38.462 9.64 0.00 0.00 3.16
221 226 5.779922 TCTGAGCTCGTTAACATAACAAGT 58.220 37.500 9.64 0.00 0.00 3.16
222 227 6.220930 TCTGAGCTCGTTAACATAACAAGTT 58.779 36.000 9.64 0.00 0.00 2.66
223 228 6.704493 TCTGAGCTCGTTAACATAACAAGTTT 59.296 34.615 9.64 0.00 0.00 2.66
224 229 7.868922 TCTGAGCTCGTTAACATAACAAGTTTA 59.131 33.333 9.64 0.00 0.00 2.01
225 230 8.367943 TGAGCTCGTTAACATAACAAGTTTAA 57.632 30.769 9.64 0.00 0.00 1.52
226 231 8.277713 TGAGCTCGTTAACATAACAAGTTTAAC 58.722 33.333 9.64 0.00 0.00 2.01
227 232 7.285788 AGCTCGTTAACATAACAAGTTTAACG 58.714 34.615 15.73 15.73 37.34 3.18
228 233 7.169645 AGCTCGTTAACATAACAAGTTTAACGA 59.830 33.333 20.63 20.63 39.54 3.85
229 234 8.840562 CTCGTTAACATAACAAGTTTAACGAG 57.159 34.615 27.41 27.41 44.33 4.18
230 235 7.282916 TCGTTAACATAACAAGTTTAACGAGC 58.717 34.615 18.95 0.00 38.47 5.03
231 236 6.517374 CGTTAACATAACAAGTTTAACGAGCC 59.483 38.462 16.52 0.00 37.70 4.70
232 237 4.657075 ACATAACAAGTTTAACGAGCCG 57.343 40.909 0.00 0.00 0.00 5.52
233 238 4.309099 ACATAACAAGTTTAACGAGCCGA 58.691 39.130 1.50 0.00 0.00 5.54
234 239 4.387862 ACATAACAAGTTTAACGAGCCGAG 59.612 41.667 1.50 0.00 0.00 4.63
235 240 1.145803 ACAAGTTTAACGAGCCGAGC 58.854 50.000 1.50 0.00 0.00 5.03
236 241 1.270147 ACAAGTTTAACGAGCCGAGCT 60.270 47.619 1.50 0.00 43.88 4.09
237 242 2.029649 ACAAGTTTAACGAGCCGAGCTA 60.030 45.455 1.50 0.00 39.88 3.32
238 243 2.563471 AGTTTAACGAGCCGAGCTAG 57.437 50.000 1.50 1.87 39.88 3.42
239 244 0.922032 GTTTAACGAGCCGAGCTAGC 59.078 55.000 6.62 6.62 39.88 3.42
240 245 0.524816 TTTAACGAGCCGAGCTAGCG 60.525 55.000 9.55 0.00 39.88 4.26
241 246 1.371337 TTAACGAGCCGAGCTAGCGA 61.371 55.000 9.55 0.00 39.88 4.93
242 247 1.773054 TAACGAGCCGAGCTAGCGAG 61.773 60.000 9.55 7.30 39.88 5.03
243 248 3.578272 CGAGCCGAGCTAGCGAGT 61.578 66.667 9.55 0.00 39.88 4.18
244 249 2.802106 GAGCCGAGCTAGCGAGTT 59.198 61.111 9.55 0.00 39.88 3.01
245 250 1.773054 CGAGCCGAGCTAGCGAGTTA 61.773 60.000 9.55 0.00 39.88 2.24
246 251 0.317186 GAGCCGAGCTAGCGAGTTAC 60.317 60.000 9.55 0.00 39.88 2.50
247 252 0.748729 AGCCGAGCTAGCGAGTTACT 60.749 55.000 9.55 0.57 36.99 2.24
248 253 0.317186 GCCGAGCTAGCGAGTTACTC 60.317 60.000 9.55 1.64 0.00 2.59
283 288 9.921637 CATTAAGCTTGTTAATTAAAAGGGACA 57.078 29.630 9.86 3.04 0.00 4.02
284 289 9.923143 ATTAAGCTTGTTAATTAAAAGGGACAC 57.077 29.630 9.86 0.00 0.00 3.67
285 290 6.969993 AGCTTGTTAATTAAAAGGGACACA 57.030 33.333 15.64 1.93 0.00 3.72
286 291 7.354751 AGCTTGTTAATTAAAAGGGACACAA 57.645 32.000 15.64 7.93 0.00 3.33
287 292 7.433680 AGCTTGTTAATTAAAAGGGACACAAG 58.566 34.615 14.08 14.08 41.77 3.16
288 293 7.286775 AGCTTGTTAATTAAAAGGGACACAAGA 59.713 33.333 19.38 0.00 41.51 3.02
289 294 8.088365 GCTTGTTAATTAAAAGGGACACAAGAT 58.912 33.333 19.38 0.00 41.51 2.40
290 295 9.410556 CTTGTTAATTAAAAGGGACACAAGATG 57.589 33.333 13.50 0.00 41.51 2.90
291 296 8.698973 TGTTAATTAAAAGGGACACAAGATGA 57.301 30.769 0.00 0.00 0.00 2.92
292 297 8.792633 TGTTAATTAAAAGGGACACAAGATGAG 58.207 33.333 0.00 0.00 0.00 2.90
293 298 8.793592 GTTAATTAAAAGGGACACAAGATGAGT 58.206 33.333 0.00 0.00 0.00 3.41
295 300 7.923414 ATTAAAAGGGACACAAGATGAGTAC 57.077 36.000 0.00 0.00 0.00 2.73
296 301 5.568620 AAAAGGGACACAAGATGAGTACT 57.431 39.130 0.00 0.00 0.00 2.73
297 302 6.681729 AAAAGGGACACAAGATGAGTACTA 57.318 37.500 0.00 0.00 0.00 1.82
298 303 6.681729 AAAGGGACACAAGATGAGTACTAA 57.318 37.500 0.00 0.00 0.00 2.24
299 304 6.875972 AAGGGACACAAGATGAGTACTAAT 57.124 37.500 0.00 0.00 0.00 1.73
300 305 7.973048 AAGGGACACAAGATGAGTACTAATA 57.027 36.000 0.00 0.00 0.00 0.98
301 306 8.554490 AAGGGACACAAGATGAGTACTAATAT 57.446 34.615 0.00 0.00 0.00 1.28
302 307 8.554490 AGGGACACAAGATGAGTACTAATATT 57.446 34.615 0.00 0.00 0.00 1.28
303 308 8.424918 AGGGACACAAGATGAGTACTAATATTG 58.575 37.037 21.32 21.32 32.56 1.90
304 309 7.171678 GGGACACAAGATGAGTACTAATATTGC 59.828 40.741 22.41 10.12 30.00 3.56
305 310 7.928706 GGACACAAGATGAGTACTAATATTGCT 59.071 37.037 22.41 11.33 30.00 3.91
306 311 8.654230 ACACAAGATGAGTACTAATATTGCTG 57.346 34.615 22.41 20.25 30.00 4.41
307 312 8.260818 ACACAAGATGAGTACTAATATTGCTGT 58.739 33.333 22.41 20.72 30.00 4.40
308 313 9.102757 CACAAGATGAGTACTAATATTGCTGTT 57.897 33.333 22.41 5.35 30.00 3.16
309 314 9.102757 ACAAGATGAGTACTAATATTGCTGTTG 57.897 33.333 22.41 6.16 30.00 3.33
310 315 9.317936 CAAGATGAGTACTAATATTGCTGTTGA 57.682 33.333 13.44 0.00 0.00 3.18
314 319 9.618890 ATGAGTACTAATATTGCTGTTGATTGT 57.381 29.630 0.00 0.00 0.00 2.71
315 320 9.448438 TGAGTACTAATATTGCTGTTGATTGTT 57.552 29.630 0.00 0.00 0.00 2.83
328 333 9.791820 TGCTGTTGATTGTTATCATTTATGAAG 57.208 29.630 0.00 0.00 40.37 3.02
329 334 9.793252 GCTGTTGATTGTTATCATTTATGAAGT 57.207 29.630 0.00 0.00 40.37 3.01
343 348 9.944663 TCATTTATGAAGTGTACAAAGTGTTTC 57.055 29.630 0.00 0.00 33.08 2.78
344 349 9.950680 CATTTATGAAGTGTACAAAGTGTTTCT 57.049 29.630 0.00 0.00 0.00 2.52
369 374 7.616103 TTAGTGTAAATTGTTGATTGTTGCG 57.384 32.000 0.00 0.00 0.00 4.85
372 377 6.582295 AGTGTAAATTGTTGATTGTTGCGATC 59.418 34.615 0.00 0.00 0.00 3.69
374 379 7.748683 GTGTAAATTGTTGATTGTTGCGATCTA 59.251 33.333 0.00 0.00 0.00 1.98
375 380 7.962373 TGTAAATTGTTGATTGTTGCGATCTAG 59.038 33.333 0.00 0.00 0.00 2.43
387 392 6.403049 TGTTGCGATCTAGGAAGAAATGTAA 58.597 36.000 0.00 0.00 34.73 2.41
462 468 8.967664 TTTGTTATTATGGTTATAGCGAGGTT 57.032 30.769 0.00 0.00 0.00 3.50
463 469 7.956420 TGTTATTATGGTTATAGCGAGGTTG 57.044 36.000 0.00 0.00 0.00 3.77
466 472 5.864418 TTATGGTTATAGCGAGGTTGACT 57.136 39.130 0.00 0.00 0.00 3.41
469 475 3.067742 TGGTTATAGCGAGGTTGACTAGC 59.932 47.826 0.00 0.00 46.78 3.42
477 483 3.427243 CGAGGTTGACTAGCTAAACGAG 58.573 50.000 0.00 0.00 33.94 4.18
516 522 3.125316 ACAAATCGAGCCGAGTTTGAATC 59.875 43.478 22.67 0.00 41.23 2.52
528 534 4.030753 CGAGTTTGAATCTGAGCTCGTTAC 59.969 45.833 9.64 0.20 40.31 2.50
529 535 3.921021 AGTTTGAATCTGAGCTCGTTACG 59.079 43.478 9.64 0.00 0.00 3.18
548 554 2.479389 ACGTTAACGAGTCAAACCGACA 60.479 45.455 33.06 0.00 44.26 4.35
550 556 5.832538 ACGTTAACGAGTCAAACCGACATG 61.833 45.833 33.06 0.00 44.26 3.21
566 572 6.334989 ACCGACATGATTCGTTATCTTAACA 58.665 36.000 0.00 0.00 37.29 2.41
567 573 6.814644 ACCGACATGATTCGTTATCTTAACAA 59.185 34.615 0.00 0.00 37.29 2.83
575 581 9.084164 TGATTCGTTATCTTAACAAGCTCTAAC 57.916 33.333 0.00 0.00 34.17 2.34
577 583 6.032094 TCGTTATCTTAACAAGCTCTAACGG 58.968 40.000 17.77 8.28 39.17 4.44
602 608 1.203100 AGCCTTGGCTGGACTTGAATT 60.203 47.619 13.99 0.00 0.00 2.17
614 620 4.105697 TGGACTTGAATTCCACCCTTACTT 59.894 41.667 0.00 0.00 38.28 2.24
615 621 4.459337 GGACTTGAATTCCACCCTTACTTG 59.541 45.833 2.27 0.00 32.82 3.16
623 629 1.339151 CCACCCTTACTTGTGCTCTCC 60.339 57.143 0.00 0.00 0.00 3.71
630 636 1.053424 ACTTGTGCTCTCCGGGTAAA 58.947 50.000 0.00 0.00 0.00 2.01
631 637 1.418637 ACTTGTGCTCTCCGGGTAAAA 59.581 47.619 0.00 0.00 0.00 1.52
632 638 2.158726 ACTTGTGCTCTCCGGGTAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
633 639 1.886886 TGTGCTCTCCGGGTAAAAAC 58.113 50.000 0.00 0.00 0.00 2.43
634 640 1.418637 TGTGCTCTCCGGGTAAAAACT 59.581 47.619 0.00 0.00 0.00 2.66
635 641 2.074576 GTGCTCTCCGGGTAAAAACTC 58.925 52.381 0.00 0.00 0.00 3.01
636 642 1.695242 TGCTCTCCGGGTAAAAACTCA 59.305 47.619 0.00 0.00 0.00 3.41
637 643 2.105134 TGCTCTCCGGGTAAAAACTCAA 59.895 45.455 0.00 0.00 0.00 3.02
638 644 2.742589 GCTCTCCGGGTAAAAACTCAAG 59.257 50.000 0.00 0.00 0.00 3.02
639 645 2.742589 CTCTCCGGGTAAAAACTCAAGC 59.257 50.000 0.00 0.00 0.00 4.01
640 646 2.370849 TCTCCGGGTAAAAACTCAAGCT 59.629 45.455 0.00 0.00 0.00 3.74
641 647 2.742589 CTCCGGGTAAAAACTCAAGCTC 59.257 50.000 0.00 0.00 0.00 4.09
642 648 2.370849 TCCGGGTAAAAACTCAAGCTCT 59.629 45.455 0.00 0.00 0.00 4.09
643 649 2.742589 CCGGGTAAAAACTCAAGCTCTC 59.257 50.000 0.00 0.00 0.00 3.20
644 650 3.399330 CGGGTAAAAACTCAAGCTCTCA 58.601 45.455 0.00 0.00 0.00 3.27
645 651 3.186613 CGGGTAAAAACTCAAGCTCTCAC 59.813 47.826 0.00 0.00 0.00 3.51
646 652 3.502595 GGGTAAAAACTCAAGCTCTCACC 59.497 47.826 0.00 0.00 0.00 4.02
647 653 4.390264 GGTAAAAACTCAAGCTCTCACCT 58.610 43.478 0.00 0.00 0.00 4.00
648 654 4.214332 GGTAAAAACTCAAGCTCTCACCTG 59.786 45.833 0.00 0.00 0.00 4.00
649 655 1.889545 AAACTCAAGCTCTCACCTGC 58.110 50.000 0.00 0.00 0.00 4.85
650 656 0.761187 AACTCAAGCTCTCACCTGCA 59.239 50.000 0.00 0.00 0.00 4.41
651 657 0.761187 ACTCAAGCTCTCACCTGCAA 59.239 50.000 0.00 0.00 0.00 4.08
652 658 1.155042 CTCAAGCTCTCACCTGCAAC 58.845 55.000 0.00 0.00 0.00 4.17
653 659 0.601046 TCAAGCTCTCACCTGCAACG 60.601 55.000 0.00 0.00 0.00 4.10
654 660 1.302033 AAGCTCTCACCTGCAACGG 60.302 57.895 0.00 0.00 0.00 4.44
655 661 2.738213 AAGCTCTCACCTGCAACGGG 62.738 60.000 0.00 0.00 35.68 5.28
656 662 2.743718 CTCTCACCTGCAACGGGT 59.256 61.111 0.00 0.00 45.12 5.28
657 663 1.071471 CTCTCACCTGCAACGGGTT 59.929 57.895 0.00 0.00 40.77 4.11
658 664 0.535102 CTCTCACCTGCAACGGGTTT 60.535 55.000 0.00 0.00 40.77 3.27
659 665 0.817634 TCTCACCTGCAACGGGTTTG 60.818 55.000 0.00 0.00 40.77 2.93
660 666 1.795170 CTCACCTGCAACGGGTTTGG 61.795 60.000 0.00 0.00 40.77 3.28
661 667 2.520741 ACCTGCAACGGGTTTGGG 60.521 61.111 0.00 0.00 40.77 4.12
662 668 2.203422 CCTGCAACGGGTTTGGGA 60.203 61.111 0.00 0.00 35.51 4.37
685 691 2.696187 GTTTGGGGGCTTTGTTTACAGA 59.304 45.455 0.00 0.00 0.00 3.41
686 692 2.990740 TGGGGGCTTTGTTTACAGAT 57.009 45.000 0.00 0.00 0.00 2.90
687 693 4.390129 TTGGGGGCTTTGTTTACAGATA 57.610 40.909 0.00 0.00 0.00 1.98
688 694 4.390129 TGGGGGCTTTGTTTACAGATAA 57.610 40.909 0.00 0.00 0.00 1.75
689 695 4.083565 TGGGGGCTTTGTTTACAGATAAC 58.916 43.478 0.00 0.00 0.00 1.89
690 696 3.446161 GGGGGCTTTGTTTACAGATAACC 59.554 47.826 0.00 0.00 0.00 2.85
691 697 4.341487 GGGGCTTTGTTTACAGATAACCT 58.659 43.478 0.00 0.00 0.00 3.50
692 698 4.770531 GGGGCTTTGTTTACAGATAACCTT 59.229 41.667 0.00 0.00 0.00 3.50
693 699 5.245301 GGGGCTTTGTTTACAGATAACCTTT 59.755 40.000 0.00 0.00 0.00 3.11
694 700 6.239487 GGGGCTTTGTTTACAGATAACCTTTT 60.239 38.462 0.00 0.00 0.00 2.27
695 701 7.214381 GGGCTTTGTTTACAGATAACCTTTTT 58.786 34.615 0.00 0.00 0.00 1.94
696 702 7.384115 GGGCTTTGTTTACAGATAACCTTTTTC 59.616 37.037 0.00 0.00 0.00 2.29
702 708 7.392393 TGTTTACAGATAACCTTTTTCCTAGCC 59.608 37.037 0.00 0.00 0.00 3.93
723 729 0.372334 GTGCGTCGTTGTTGTCAGTT 59.628 50.000 0.00 0.00 0.00 3.16
727 733 3.060138 TGCGTCGTTGTTGTCAGTTTATC 60.060 43.478 0.00 0.00 0.00 1.75
740 746 5.219633 GTCAGTTTATCGCAAATTGTTGGT 58.780 37.500 0.00 0.00 35.10 3.67
746 752 6.517914 TTATCGCAAATTGTTGGTTTTGTC 57.482 33.333 0.00 0.00 35.69 3.18
755 761 2.198406 GTTGGTTTTGTCGGCCTTTTC 58.802 47.619 0.00 0.00 0.00 2.29
756 762 1.770294 TGGTTTTGTCGGCCTTTTCT 58.230 45.000 0.00 0.00 0.00 2.52
757 763 2.104170 TGGTTTTGTCGGCCTTTTCTT 58.896 42.857 0.00 0.00 0.00 2.52
758 764 3.288964 TGGTTTTGTCGGCCTTTTCTTA 58.711 40.909 0.00 0.00 0.00 2.10
759 765 3.892588 TGGTTTTGTCGGCCTTTTCTTAT 59.107 39.130 0.00 0.00 0.00 1.73
760 766 4.342665 TGGTTTTGTCGGCCTTTTCTTATT 59.657 37.500 0.00 0.00 0.00 1.40
761 767 5.535406 TGGTTTTGTCGGCCTTTTCTTATTA 59.465 36.000 0.00 0.00 0.00 0.98
762 768 6.209788 TGGTTTTGTCGGCCTTTTCTTATTAT 59.790 34.615 0.00 0.00 0.00 1.28
763 769 7.094631 GGTTTTGTCGGCCTTTTCTTATTATT 58.905 34.615 0.00 0.00 0.00 1.40
764 770 8.245491 GGTTTTGTCGGCCTTTTCTTATTATTA 58.755 33.333 0.00 0.00 0.00 0.98
794 800 6.252967 TGACTGGCTGTGTACATTTTTATG 57.747 37.500 0.29 0.00 0.00 1.90
795 801 5.767665 TGACTGGCTGTGTACATTTTTATGT 59.232 36.000 0.29 0.00 38.49 2.29
796 802 6.072728 TGACTGGCTGTGTACATTTTTATGTC 60.073 38.462 0.29 4.12 36.08 3.06
797 803 6.003950 ACTGGCTGTGTACATTTTTATGTCT 58.996 36.000 0.00 0.00 36.08 3.41
798 804 7.165485 ACTGGCTGTGTACATTTTTATGTCTA 58.835 34.615 0.00 0.00 36.08 2.59
799 805 7.334421 ACTGGCTGTGTACATTTTTATGTCTAG 59.666 37.037 0.00 0.00 36.08 2.43
800 806 7.390823 TGGCTGTGTACATTTTTATGTCTAGA 58.609 34.615 0.00 0.00 36.08 2.43
801 807 7.333423 TGGCTGTGTACATTTTTATGTCTAGAC 59.667 37.037 16.32 16.32 36.08 2.59
804 810 9.424319 CTGTGTACATTTTTATGTCTAGACTGT 57.576 33.333 23.01 17.94 36.08 3.55
841 848 2.625790 TGTGTCATTGTAAAGGTTGGGC 59.374 45.455 0.00 0.00 0.00 5.36
842 849 1.883275 TGTCATTGTAAAGGTTGGGCG 59.117 47.619 0.00 0.00 0.00 6.13
843 850 1.883926 GTCATTGTAAAGGTTGGGCGT 59.116 47.619 0.00 0.00 0.00 5.68
844 851 3.075884 GTCATTGTAAAGGTTGGGCGTA 58.924 45.455 0.00 0.00 0.00 4.42
846 853 4.157105 GTCATTGTAAAGGTTGGGCGTAAT 59.843 41.667 0.00 0.00 0.00 1.89
848 855 5.944599 TCATTGTAAAGGTTGGGCGTAATTA 59.055 36.000 0.00 0.00 0.00 1.40
849 856 6.603997 TCATTGTAAAGGTTGGGCGTAATTAT 59.396 34.615 0.00 0.00 0.00 1.28
850 857 6.439675 TTGTAAAGGTTGGGCGTAATTATC 57.560 37.500 0.00 0.00 0.00 1.75
851 858 5.747342 TGTAAAGGTTGGGCGTAATTATCT 58.253 37.500 0.00 0.00 0.00 1.98
852 859 5.818857 TGTAAAGGTTGGGCGTAATTATCTC 59.181 40.000 0.00 0.00 0.00 2.75
853 860 3.107642 AGGTTGGGCGTAATTATCTCG 57.892 47.619 0.00 0.00 0.00 4.04
879 886 3.653539 AAAAGGTTGGGCGTAATTGAC 57.346 42.857 0.00 0.00 0.00 3.18
885 892 4.953579 AGGTTGGGCGTAATTGACATAATT 59.046 37.500 0.00 0.00 0.00 1.40
890 897 7.392494 TGGGCGTAATTGACATAATTTTGTA 57.608 32.000 1.22 0.00 0.00 2.41
983 992 2.644992 GCAGCAAAACTCCACCCG 59.355 61.111 0.00 0.00 0.00 5.28
1017 1031 2.657237 CACGCCGTCCCTCTTTCT 59.343 61.111 0.00 0.00 0.00 2.52
1019 1033 1.606889 ACGCCGTCCCTCTTTCTCT 60.607 57.895 0.00 0.00 0.00 3.10
1042 1056 4.189188 CCGATCGCCGTCTCCGTT 62.189 66.667 10.32 0.00 36.31 4.44
1093 1110 1.418342 CGTCATCGGCCAGGTAAACG 61.418 60.000 2.24 0.31 0.00 3.60
1220 1242 0.099082 CGGTCGAGGACAAGCTAGAC 59.901 60.000 0.00 0.00 33.68 2.59
1433 1455 4.382320 TACCGCGACAACTGGCCC 62.382 66.667 8.23 0.00 0.00 5.80
1453 1475 2.260869 GCAAGGTGCGCTCCTTTCA 61.261 57.895 34.77 0.00 44.36 2.69
1474 1496 6.029346 TCATTGGCTTCCTTCTTTTCATTC 57.971 37.500 0.00 0.00 0.00 2.67
1482 1508 6.295518 GCTTCCTTCTTTTCATTCCATTCCTT 60.296 38.462 0.00 0.00 0.00 3.36
1483 1509 6.594788 TCCTTCTTTTCATTCCATTCCTTG 57.405 37.500 0.00 0.00 0.00 3.61
1485 1511 5.337813 CCTTCTTTTCATTCCATTCCTTGGG 60.338 44.000 0.00 0.00 46.45 4.12
1486 1512 4.095946 TCTTTTCATTCCATTCCTTGGGG 58.904 43.478 0.00 0.00 46.45 4.96
1487 1513 3.843177 TTTCATTCCATTCCTTGGGGA 57.157 42.857 0.00 0.00 46.45 4.81
1570 1596 2.984562 TGATAATGCTGTGCCTTTCGA 58.015 42.857 0.00 0.00 0.00 3.71
1576 1602 0.371645 GCTGTGCCTTTCGAAGATCG 59.628 55.000 0.00 0.00 42.10 3.69
1635 1661 1.549265 GGTTCTTTACCCAACCCCTGG 60.549 57.143 0.00 0.00 45.97 4.45
1706 1762 3.671702 GCACAAGCCATGCTCTTTAACTC 60.672 47.826 0.00 0.00 38.25 3.01
1806 1869 1.956477 ACTCACAAATGCTTGGTGTCC 59.044 47.619 0.00 0.00 36.82 4.02
2059 2127 8.396619 ACTAATATGGTACCAAGAAAACCCTA 57.603 34.615 20.76 3.42 31.97 3.53
2066 2134 6.127394 TGGTACCAAGAAAACCCTAAACAAAC 60.127 38.462 13.60 0.00 31.97 2.93
2157 2225 4.704540 TGTGCTCGGGTTTATTGATTTGAT 59.295 37.500 0.00 0.00 0.00 2.57
2256 2324 0.815734 TGTAGCTCTACGGCCTGAAC 59.184 55.000 0.00 0.00 38.85 3.18
2282 2350 5.339200 CCCACCCAACTCTGAATTATGTACT 60.339 44.000 0.00 0.00 0.00 2.73
2293 2361 5.428253 TGAATTATGTACTGCACCTCTTCC 58.572 41.667 0.00 0.00 0.00 3.46
2497 2595 4.512198 GTGATCAGATCTTTGCATCTCTGG 59.488 45.833 11.83 0.00 36.59 3.86
2529 2627 1.068954 GCTAGCAACCACTTCAGCAAC 60.069 52.381 10.63 0.00 0.00 4.17
2724 2829 3.706698 CGACTCTGTTGAACTGTTCTGA 58.293 45.455 20.18 12.08 0.00 3.27
2828 2933 1.765314 GAGAGCAGATGCCCTAGGAAA 59.235 52.381 11.48 0.00 43.38 3.13
2833 2938 5.103940 AGAGCAGATGCCCTAGGAAAAATTA 60.104 40.000 11.48 0.00 43.38 1.40
2880 2985 3.190849 CCGTGCATGAGGACTGCG 61.191 66.667 7.72 0.00 42.62 5.18
2927 3032 9.443283 CTCTGCATCTACTATAAATTGTTTTGC 57.557 33.333 0.00 0.00 0.00 3.68
2970 3075 6.016024 ACACATGTGCTTGAGTCATTTTATGT 60.016 34.615 25.68 0.00 0.00 2.29
3029 3135 2.550830 TCAGGACTGTGAAAAGAGGC 57.449 50.000 0.00 0.00 0.00 4.70
3053 3159 4.965814 TGCATTCTGGATGAATCTCCTAC 58.034 43.478 0.00 0.00 43.00 3.18
3167 3284 3.121929 ACAGCAGAGAGATTTAGGGGA 57.878 47.619 0.00 0.00 0.00 4.81
3230 3347 0.247736 ATCCAGAGCGTGTCCACTTC 59.752 55.000 0.00 0.00 0.00 3.01
3245 4411 4.153117 GTCCACTTCTGCATGTGTTTAGAG 59.847 45.833 11.77 0.00 32.76 2.43
3257 4423 6.430451 CATGTGTTTAGAGGTCAAAACTCAC 58.570 40.000 5.22 0.00 40.08 3.51
3259 4425 5.123936 GTGTTTAGAGGTCAAAACTCACCT 58.876 41.667 0.00 0.00 46.35 4.00
3293 4459 8.828644 CATCTCAGAATTATTTGAGTCCTTGAG 58.171 37.037 11.62 0.00 41.21 3.02
3336 4502 5.448654 TGAAGCTATTGTTGGGATGCTATT 58.551 37.500 0.00 0.00 0.00 1.73
3388 4554 2.873245 GCAACATGAAGAGTGCTGGAGA 60.873 50.000 0.00 0.00 0.00 3.71
3547 4721 6.164876 CACTAGAGATCAAGGATATGGCAAG 58.835 44.000 0.00 0.00 0.00 4.01
3722 4900 1.664965 AGAAGAACGCTGTGACGGC 60.665 57.895 6.27 6.27 37.37 5.68
3851 5029 6.500589 TCTTACATCTCTCCTTTATTGGGG 57.499 41.667 0.00 0.00 0.00 4.96
3970 5148 5.414789 AAAAACTAAGGGTTGTTGTGCTT 57.585 34.783 0.00 0.00 38.29 3.91
3983 5161 0.183492 TGTGCTTCCAACTCTTGCCT 59.817 50.000 0.00 0.00 0.00 4.75
3994 5172 4.214332 CCAACTCTTGCCTTAGTGAAGAAC 59.786 45.833 0.00 0.00 34.25 3.01
4053 5231 4.513442 ACAGTTTGTTCTTCAGCTGTGTA 58.487 39.130 14.67 0.00 40.10 2.90
4099 5279 6.091713 GGCGTGTGTGTAACTATTATTTCTGT 59.908 38.462 0.00 0.00 38.04 3.41
4489 5669 8.722394 GTTTGGTTTGTTTATTTGAGTGGAAAA 58.278 29.630 0.00 0.00 0.00 2.29
4522 5702 0.389166 AGCAGGACTTTTCTCGCTCG 60.389 55.000 0.00 0.00 0.00 5.03
4523 5703 1.355066 GCAGGACTTTTCTCGCTCGG 61.355 60.000 0.00 0.00 0.00 4.63
4532 5712 0.317160 TTCTCGCTCGGTGTGATTGT 59.683 50.000 0.00 0.00 34.35 2.71
4547 5727 6.017933 GTGTGATTGTCAGAAAATCGATGAC 58.982 40.000 8.56 8.78 42.90 3.06
4550 5730 7.602265 TGTGATTGTCAGAAAATCGATGACTTA 59.398 33.333 15.11 6.01 42.99 2.24
4560 5740 6.727824 AAATCGATGACTTACTTGACAAGG 57.272 37.500 19.16 4.43 0.00 3.61
4565 5745 6.602009 TCGATGACTTACTTGACAAGGAGATA 59.398 38.462 19.16 10.65 0.00 1.98
4597 5777 3.610242 CCTGATTCGCGATACTATTGCTC 59.390 47.826 10.88 0.00 37.53 4.26
4598 5778 3.234386 TGATTCGCGATACTATTGCTCG 58.766 45.455 10.88 0.00 37.53 5.03
4601 5781 2.062779 GCGATACTATTGCTCGCGG 58.937 57.895 6.13 0.00 46.74 6.46
4602 5782 0.386858 GCGATACTATTGCTCGCGGA 60.387 55.000 6.13 0.00 46.74 5.54
4643 5823 5.842907 ACAAGTTACAAATCTGAAAAGCCC 58.157 37.500 0.00 0.00 0.00 5.19
4644 5824 5.598417 ACAAGTTACAAATCTGAAAAGCCCT 59.402 36.000 0.00 0.00 0.00 5.19
4645 5825 5.966742 AGTTACAAATCTGAAAAGCCCTC 57.033 39.130 0.00 0.00 0.00 4.30
4646 5826 4.455877 AGTTACAAATCTGAAAAGCCCTCG 59.544 41.667 0.00 0.00 0.00 4.63
4647 5827 3.140325 ACAAATCTGAAAAGCCCTCGA 57.860 42.857 0.00 0.00 0.00 4.04
4648 5828 3.077359 ACAAATCTGAAAAGCCCTCGAG 58.923 45.455 5.13 5.13 0.00 4.04
4649 5829 3.244561 ACAAATCTGAAAAGCCCTCGAGA 60.245 43.478 15.71 0.00 0.00 4.04
4650 5830 3.703001 AATCTGAAAAGCCCTCGAGAA 57.297 42.857 15.71 0.00 0.00 2.87
4651 5831 2.751166 TCTGAAAAGCCCTCGAGAAG 57.249 50.000 15.71 5.99 0.00 2.85
4652 5832 1.276421 TCTGAAAAGCCCTCGAGAAGG 59.724 52.381 15.71 8.83 45.77 3.46
4743 5923 3.318275 ACCGGCTGTATAGTACACATCAG 59.682 47.826 0.00 0.00 34.46 2.90
4750 5930 9.976511 GGCTGTATAGTACACATCAGTAAATTA 57.023 33.333 0.00 0.00 34.46 1.40
4767 5947 6.966632 AGTAAATTATGTACAACAATGCTGCG 59.033 34.615 0.00 0.00 0.00 5.18
4792 5981 1.202099 TGGTGGACGGCATTCCCTTA 61.202 55.000 0.00 0.00 34.33 2.69
4936 6178 5.635120 AGGAACACTTCTCAAGGCTTATTT 58.365 37.500 0.00 0.00 0.00 1.40
5011 6253 7.537596 TTTGAAACAATATTGATGGTCACCT 57.462 32.000 22.16 0.00 0.00 4.00
5012 6254 7.537596 TTGAAACAATATTGATGGTCACCTT 57.462 32.000 22.16 0.00 0.00 3.50
5013 6255 7.537596 TGAAACAATATTGATGGTCACCTTT 57.462 32.000 22.16 8.30 0.00 3.11
5014 6256 7.601856 TGAAACAATATTGATGGTCACCTTTC 58.398 34.615 22.16 16.04 0.00 2.62
5015 6257 5.818136 ACAATATTGATGGTCACCTTTCG 57.182 39.130 22.16 0.00 0.00 3.46
5016 6258 5.253330 ACAATATTGATGGTCACCTTTCGT 58.747 37.500 22.16 0.00 0.00 3.85
5017 6259 5.354234 ACAATATTGATGGTCACCTTTCGTC 59.646 40.000 22.16 0.00 0.00 4.20
5018 6260 2.920724 TTGATGGTCACCTTTCGTCA 57.079 45.000 0.00 0.00 0.00 4.35
5019 6261 3.417069 TTGATGGTCACCTTTCGTCAT 57.583 42.857 0.00 0.00 0.00 3.06
5020 6262 4.545208 TTGATGGTCACCTTTCGTCATA 57.455 40.909 0.00 0.00 0.00 2.15
5021 6263 4.753516 TGATGGTCACCTTTCGTCATAT 57.246 40.909 0.00 0.00 0.00 1.78
5022 6264 4.441792 TGATGGTCACCTTTCGTCATATG 58.558 43.478 0.00 0.00 0.00 1.78
5023 6265 4.161377 TGATGGTCACCTTTCGTCATATGA 59.839 41.667 0.00 0.00 0.00 2.15
5024 6266 4.753516 TGGTCACCTTTCGTCATATGAT 57.246 40.909 9.02 0.00 0.00 2.45
5025 6267 5.097742 TGGTCACCTTTCGTCATATGATT 57.902 39.130 9.02 0.00 0.00 2.57
5026 6268 5.496556 TGGTCACCTTTCGTCATATGATTT 58.503 37.500 9.02 0.00 0.00 2.17
5027 6269 5.943416 TGGTCACCTTTCGTCATATGATTTT 59.057 36.000 9.02 0.00 0.00 1.82
5069 6311 6.462207 CCCAAATGTCACTTTTTATGTGTGGA 60.462 38.462 0.00 0.00 36.83 4.02
5070 6312 6.983307 CCAAATGTCACTTTTTATGTGTGGAA 59.017 34.615 0.00 0.00 36.83 3.53
5071 6313 7.493971 CCAAATGTCACTTTTTATGTGTGGAAA 59.506 33.333 0.00 0.00 36.83 3.13
5102 6743 6.479990 TGATGCTTTAGATTACATCGGTTGAG 59.520 38.462 0.00 0.00 41.43 3.02
5118 6759 3.066621 GGTTGAGTGATGTTGCACAAGAA 59.933 43.478 0.00 0.00 41.19 2.52
5119 6760 4.439974 GGTTGAGTGATGTTGCACAAGAAA 60.440 41.667 0.00 0.00 41.19 2.52
5162 6805 6.987386 TCTTTGGTATGTGTTGTTATTTGGG 58.013 36.000 0.00 0.00 0.00 4.12
5163 6806 6.551601 TCTTTGGTATGTGTTGTTATTTGGGT 59.448 34.615 0.00 0.00 0.00 4.51
5165 6808 4.767928 TGGTATGTGTTGTTATTTGGGTCC 59.232 41.667 0.00 0.00 0.00 4.46
5175 6818 7.830201 TGTTGTTATTTGGGTCCGAACTATAAT 59.170 33.333 0.00 0.00 0.00 1.28
5218 6876 7.001674 TGTAAGAAAGTTTTCCCTAATGCTCA 58.998 34.615 1.16 0.00 37.92 4.26
5273 6932 6.982724 GGAATATCTTCAGCCAAATTTCCTTG 59.017 38.462 0.00 0.00 32.70 3.61
5274 6933 7.364144 GGAATATCTTCAGCCAAATTTCCTTGT 60.364 37.037 0.00 0.00 32.70 3.16
5278 6937 2.137523 CAGCCAAATTTCCTTGTGTGC 58.862 47.619 0.00 0.00 0.00 4.57
5280 6939 1.070601 GCCAAATTTCCTTGTGTGCCT 59.929 47.619 0.00 0.00 0.00 4.75
5316 6979 9.830975 TCAATATTCGAATAAAACTGATCTCCA 57.169 29.630 21.05 0.00 0.00 3.86
5327 6990 3.549794 ACTGATCTCCAATGGCTTTAGC 58.450 45.455 0.00 0.00 41.14 3.09
5333 6996 3.009473 TCTCCAATGGCTTTAGCTTCACT 59.991 43.478 0.00 0.00 41.70 3.41
5339 7002 1.403323 GGCTTTAGCTTCACTGATGGC 59.597 52.381 0.00 0.00 41.70 4.40
5343 7006 1.871418 TAGCTTCACTGATGGCCTCT 58.129 50.000 3.32 0.00 0.00 3.69
5344 7007 0.990374 AGCTTCACTGATGGCCTCTT 59.010 50.000 3.32 0.00 0.00 2.85
5345 7008 1.093159 GCTTCACTGATGGCCTCTTG 58.907 55.000 3.32 1.66 0.00 3.02
5346 7009 1.612726 GCTTCACTGATGGCCTCTTGT 60.613 52.381 3.32 0.00 0.00 3.16
5347 7010 2.355108 GCTTCACTGATGGCCTCTTGTA 60.355 50.000 3.32 0.00 0.00 2.41
5348 7011 3.869912 GCTTCACTGATGGCCTCTTGTAA 60.870 47.826 3.32 0.00 0.00 2.41
5349 7012 3.616956 TCACTGATGGCCTCTTGTAAG 57.383 47.619 3.32 0.00 0.00 2.34
5350 7013 3.173151 TCACTGATGGCCTCTTGTAAGA 58.827 45.455 3.32 0.00 0.00 2.10
5351 7014 3.582647 TCACTGATGGCCTCTTGTAAGAA 59.417 43.478 3.32 0.00 34.03 2.52
5352 7015 4.041567 TCACTGATGGCCTCTTGTAAGAAA 59.958 41.667 3.32 0.00 34.03 2.52
5353 7016 4.761739 CACTGATGGCCTCTTGTAAGAAAA 59.238 41.667 3.32 0.00 34.03 2.29
5354 7017 5.006386 ACTGATGGCCTCTTGTAAGAAAAG 58.994 41.667 3.32 0.00 34.03 2.27
5355 7018 4.335416 TGATGGCCTCTTGTAAGAAAAGG 58.665 43.478 3.32 0.00 34.03 3.11
5356 7019 2.514803 TGGCCTCTTGTAAGAAAAGGC 58.485 47.619 3.32 12.48 40.97 4.35
5357 7020 2.158534 TGGCCTCTTGTAAGAAAAGGCA 60.159 45.455 19.01 14.36 42.52 4.75
5358 7021 2.890945 GGCCTCTTGTAAGAAAAGGCAA 59.109 45.455 19.01 0.00 42.52 4.52
5359 7022 3.057245 GGCCTCTTGTAAGAAAAGGCAAG 60.057 47.826 19.01 0.00 42.52 4.01
5360 7023 3.612717 GCCTCTTGTAAGAAAAGGCAAGC 60.613 47.826 14.83 0.00 41.20 4.01
5361 7024 3.569701 CCTCTTGTAAGAAAAGGCAAGCA 59.430 43.478 0.00 0.00 38.44 3.91
5362 7025 4.219288 CCTCTTGTAAGAAAAGGCAAGCAT 59.781 41.667 0.00 0.00 38.44 3.79
5363 7026 5.279156 CCTCTTGTAAGAAAAGGCAAGCATT 60.279 40.000 0.00 0.00 38.44 3.56
5364 7027 5.772521 TCTTGTAAGAAAAGGCAAGCATTC 58.227 37.500 0.00 0.00 38.44 2.67
5365 7028 5.301551 TCTTGTAAGAAAAGGCAAGCATTCA 59.698 36.000 0.00 0.00 38.44 2.57
5366 7029 4.870363 TGTAAGAAAAGGCAAGCATTCAC 58.130 39.130 0.00 0.00 0.00 3.18
5367 7030 4.340666 TGTAAGAAAAGGCAAGCATTCACA 59.659 37.500 0.00 0.00 0.00 3.58
5368 7031 4.405116 AAGAAAAGGCAAGCATTCACAA 57.595 36.364 0.00 0.00 0.00 3.33
5369 7032 4.405116 AGAAAAGGCAAGCATTCACAAA 57.595 36.364 0.00 0.00 0.00 2.83
5370 7033 4.964593 AGAAAAGGCAAGCATTCACAAAT 58.035 34.783 0.00 0.00 0.00 2.32
5371 7034 6.100404 AGAAAAGGCAAGCATTCACAAATA 57.900 33.333 0.00 0.00 0.00 1.40
5372 7035 5.928264 AGAAAAGGCAAGCATTCACAAATAC 59.072 36.000 0.00 0.00 0.00 1.89
5373 7036 4.870123 AAGGCAAGCATTCACAAATACA 57.130 36.364 0.00 0.00 0.00 2.29
5374 7037 5.410355 AAGGCAAGCATTCACAAATACAT 57.590 34.783 0.00 0.00 0.00 2.29
5375 7038 6.528537 AAGGCAAGCATTCACAAATACATA 57.471 33.333 0.00 0.00 0.00 2.29
5376 7039 6.528537 AGGCAAGCATTCACAAATACATAA 57.471 33.333 0.00 0.00 0.00 1.90
5377 7040 6.934056 AGGCAAGCATTCACAAATACATAAA 58.066 32.000 0.00 0.00 0.00 1.40
5378 7041 7.037438 AGGCAAGCATTCACAAATACATAAAG 58.963 34.615 0.00 0.00 0.00 1.85
5379 7042 6.813152 GGCAAGCATTCACAAATACATAAAGT 59.187 34.615 0.00 0.00 0.00 2.66
5380 7043 7.973388 GGCAAGCATTCACAAATACATAAAGTA 59.027 33.333 0.00 0.00 37.06 2.24
5381 7044 8.798153 GCAAGCATTCACAAATACATAAAGTAC 58.202 33.333 0.00 0.00 35.05 2.73
5409 7072 6.739900 TTGTTTGTTACATTGCATACAACG 57.260 33.333 0.00 0.00 38.99 4.10
5410 7073 4.677378 TGTTTGTTACATTGCATACAACGC 59.323 37.500 0.00 0.00 38.99 4.84
5411 7074 4.757799 TTGTTACATTGCATACAACGCT 57.242 36.364 0.00 0.00 38.99 5.07
5412 7075 5.864628 TTGTTACATTGCATACAACGCTA 57.135 34.783 0.00 0.00 38.99 4.26
5413 7076 6.429791 TTGTTACATTGCATACAACGCTAT 57.570 33.333 0.00 0.00 38.99 2.97
5414 7077 7.541122 TTGTTACATTGCATACAACGCTATA 57.459 32.000 0.00 0.00 38.99 1.31
5415 7078 7.722795 TGTTACATTGCATACAACGCTATAT 57.277 32.000 0.00 0.00 38.99 0.86
5416 7079 7.571892 TGTTACATTGCATACAACGCTATATG 58.428 34.615 0.00 0.00 38.99 1.78
5430 7093 7.740519 AACGCTATATGCTTTGAATTGTTTC 57.259 32.000 0.00 0.00 40.11 2.78
5431 7094 7.088589 ACGCTATATGCTTTGAATTGTTTCT 57.911 32.000 0.00 0.00 40.11 2.52
5432 7095 8.208718 ACGCTATATGCTTTGAATTGTTTCTA 57.791 30.769 0.00 0.00 40.11 2.10
5433 7096 8.122952 ACGCTATATGCTTTGAATTGTTTCTAC 58.877 33.333 0.00 0.00 40.11 2.59
5434 7097 8.338259 CGCTATATGCTTTGAATTGTTTCTACT 58.662 33.333 0.00 0.00 40.11 2.57
5440 7103 9.630098 ATGCTTTGAATTGTTTCTACTTACATG 57.370 29.630 0.00 0.00 32.78 3.21
5441 7104 8.629158 TGCTTTGAATTGTTTCTACTTACATGT 58.371 29.630 2.69 2.69 32.78 3.21
5442 7105 9.118236 GCTTTGAATTGTTTCTACTTACATGTC 57.882 33.333 0.00 0.00 32.78 3.06
5445 7108 9.554395 TTGAATTGTTTCTACTTACATGTCAGA 57.446 29.630 13.93 4.87 32.78 3.27
5446 7109 9.725019 TGAATTGTTTCTACTTACATGTCAGAT 57.275 29.630 13.93 1.40 32.78 2.90
5478 7141 9.520204 AAATAAACTGATGAAACTTTGTGTCAG 57.480 29.630 0.00 0.00 32.93 3.51
5479 7142 6.757897 AAACTGATGAAACTTTGTGTCAGA 57.242 33.333 7.14 0.00 32.93 3.27
5480 7143 5.741388 ACTGATGAAACTTTGTGTCAGAC 57.259 39.130 7.14 0.00 32.93 3.51
5481 7144 5.185454 ACTGATGAAACTTTGTGTCAGACA 58.815 37.500 0.00 0.00 32.93 3.41
5499 7162 9.562408 TGTCAGACACATAATTTAAGGTAAACA 57.438 29.630 0.00 0.00 0.00 2.83
5514 7177 9.738832 TTAAGGTAAACAAGTGAATGCTAAAAC 57.261 29.630 0.00 0.00 0.00 2.43
5515 7178 7.341445 AGGTAAACAAGTGAATGCTAAAACA 57.659 32.000 0.00 0.00 0.00 2.83
5516 7179 7.425606 AGGTAAACAAGTGAATGCTAAAACAG 58.574 34.615 0.00 0.00 0.00 3.16
5517 7180 7.068226 AGGTAAACAAGTGAATGCTAAAACAGT 59.932 33.333 0.00 0.00 0.00 3.55
5518 7181 8.347035 GGTAAACAAGTGAATGCTAAAACAGTA 58.653 33.333 0.00 0.00 0.00 2.74
5519 7182 9.724839 GTAAACAAGTGAATGCTAAAACAGTAA 57.275 29.630 0.00 0.00 0.00 2.24
5521 7184 9.816354 AAACAAGTGAATGCTAAAACAGTAAAT 57.184 25.926 0.00 0.00 0.00 1.40
5523 7186 9.893305 ACAAGTGAATGCTAAAACAGTAAATAC 57.107 29.630 0.00 0.00 0.00 1.89
5524 7187 9.891828 CAAGTGAATGCTAAAACAGTAAATACA 57.108 29.630 0.00 0.00 0.00 2.29
5526 7189 9.284968 AGTGAATGCTAAAACAGTAAATACAGT 57.715 29.630 0.00 0.00 0.00 3.55
5527 7190 9.329913 GTGAATGCTAAAACAGTAAATACAGTG 57.670 33.333 0.00 0.00 0.00 3.66
5528 7191 8.511321 TGAATGCTAAAACAGTAAATACAGTGG 58.489 33.333 0.00 0.00 0.00 4.00
5529 7192 6.249035 TGCTAAAACAGTAAATACAGTGGC 57.751 37.500 0.00 0.00 0.00 5.01
5530 7193 5.765677 TGCTAAAACAGTAAATACAGTGGCA 59.234 36.000 0.00 0.00 0.00 4.92
5531 7194 6.432783 TGCTAAAACAGTAAATACAGTGGCAT 59.567 34.615 0.00 0.00 0.00 4.40
5532 7195 6.747280 GCTAAAACAGTAAATACAGTGGCATG 59.253 38.462 0.00 0.00 0.00 4.06
5533 7196 5.643379 AAACAGTAAATACAGTGGCATGG 57.357 39.130 0.00 0.00 0.00 3.66
5534 7197 4.568072 ACAGTAAATACAGTGGCATGGA 57.432 40.909 0.00 0.00 0.00 3.41
5535 7198 5.116084 ACAGTAAATACAGTGGCATGGAT 57.884 39.130 0.00 0.00 0.00 3.41
5536 7199 6.247229 ACAGTAAATACAGTGGCATGGATA 57.753 37.500 0.00 0.00 0.00 2.59
5537 7200 6.658849 ACAGTAAATACAGTGGCATGGATAA 58.341 36.000 0.00 0.00 0.00 1.75
5538 7201 7.116075 ACAGTAAATACAGTGGCATGGATAAA 58.884 34.615 0.00 0.00 0.00 1.40
5539 7202 7.067008 ACAGTAAATACAGTGGCATGGATAAAC 59.933 37.037 0.00 0.00 0.00 2.01
5540 7203 7.283127 CAGTAAATACAGTGGCATGGATAAACT 59.717 37.037 0.00 0.00 0.00 2.66
5541 7204 7.834181 AGTAAATACAGTGGCATGGATAAACTT 59.166 33.333 0.00 0.00 0.00 2.66
5542 7205 6.455360 AATACAGTGGCATGGATAAACTTG 57.545 37.500 0.00 0.00 0.00 3.16
5543 7206 4.032960 ACAGTGGCATGGATAAACTTGA 57.967 40.909 0.00 0.00 0.00 3.02
5544 7207 4.603131 ACAGTGGCATGGATAAACTTGAT 58.397 39.130 0.00 0.00 0.00 2.57
5545 7208 4.641989 ACAGTGGCATGGATAAACTTGATC 59.358 41.667 0.00 0.00 0.00 2.92
5546 7209 3.879295 AGTGGCATGGATAAACTTGATCG 59.121 43.478 0.00 0.00 0.00 3.69
5547 7210 3.627577 GTGGCATGGATAAACTTGATCGT 59.372 43.478 0.00 0.00 0.00 3.73
5548 7211 4.814234 GTGGCATGGATAAACTTGATCGTA 59.186 41.667 0.00 0.00 0.00 3.43
5549 7212 5.050091 GTGGCATGGATAAACTTGATCGTAG 60.050 44.000 0.00 0.00 0.00 3.51
5550 7213 4.452455 GGCATGGATAAACTTGATCGTAGG 59.548 45.833 0.00 0.00 0.00 3.18
5551 7214 4.083802 GCATGGATAAACTTGATCGTAGGC 60.084 45.833 0.00 0.00 0.00 3.93
5552 7215 5.300752 CATGGATAAACTTGATCGTAGGCT 58.699 41.667 0.00 0.00 0.00 4.58
5553 7216 6.455647 CATGGATAAACTTGATCGTAGGCTA 58.544 40.000 0.00 0.00 0.00 3.93
5554 7217 6.665992 TGGATAAACTTGATCGTAGGCTAT 57.334 37.500 0.00 0.00 0.00 2.97
5555 7218 6.455647 TGGATAAACTTGATCGTAGGCTATG 58.544 40.000 7.45 7.45 0.00 2.23
5556 7219 6.266786 TGGATAAACTTGATCGTAGGCTATGA 59.733 38.462 18.22 18.22 0.00 2.15
5557 7220 7.039011 TGGATAAACTTGATCGTAGGCTATGAT 60.039 37.037 25.44 25.44 37.14 2.45
5558 7221 7.276658 GGATAAACTTGATCGTAGGCTATGATG 59.723 40.741 29.09 18.71 34.68 3.07
5559 7222 5.791336 AACTTGATCGTAGGCTATGATGA 57.209 39.130 29.09 20.55 34.68 2.92
5560 7223 5.791336 ACTTGATCGTAGGCTATGATGAA 57.209 39.130 29.09 25.26 34.68 2.57
5561 7224 6.161855 ACTTGATCGTAGGCTATGATGAAA 57.838 37.500 29.09 21.27 34.68 2.69
5562 7225 6.219473 ACTTGATCGTAGGCTATGATGAAAG 58.781 40.000 29.09 28.23 34.68 2.62
5563 7226 5.139435 TGATCGTAGGCTATGATGAAAGG 57.861 43.478 29.09 0.00 34.68 3.11
5564 7227 4.588951 TGATCGTAGGCTATGATGAAAGGT 59.411 41.667 29.09 8.51 34.68 3.50
5565 7228 4.322080 TCGTAGGCTATGATGAAAGGTG 57.678 45.455 12.38 0.00 0.00 4.00
5566 7229 3.704566 TCGTAGGCTATGATGAAAGGTGT 59.295 43.478 12.38 0.00 0.00 4.16
5567 7230 4.161565 TCGTAGGCTATGATGAAAGGTGTT 59.838 41.667 12.38 0.00 0.00 3.32
5568 7231 5.361571 TCGTAGGCTATGATGAAAGGTGTTA 59.638 40.000 12.38 0.00 0.00 2.41
5569 7232 6.046593 CGTAGGCTATGATGAAAGGTGTTAA 58.953 40.000 8.06 0.00 0.00 2.01
5570 7233 6.201044 CGTAGGCTATGATGAAAGGTGTTAAG 59.799 42.308 8.06 0.00 0.00 1.85
5571 7234 5.440610 AGGCTATGATGAAAGGTGTTAAGG 58.559 41.667 0.00 0.00 0.00 2.69
5572 7235 5.044846 AGGCTATGATGAAAGGTGTTAAGGT 60.045 40.000 0.00 0.00 0.00 3.50
5573 7236 5.652452 GGCTATGATGAAAGGTGTTAAGGTT 59.348 40.000 0.00 0.00 0.00 3.50
5574 7237 6.404734 GGCTATGATGAAAGGTGTTAAGGTTG 60.405 42.308 0.00 0.00 0.00 3.77
5575 7238 6.151144 GCTATGATGAAAGGTGTTAAGGTTGT 59.849 38.462 0.00 0.00 0.00 3.32
5576 7239 6.976934 ATGATGAAAGGTGTTAAGGTTGTT 57.023 33.333 0.00 0.00 0.00 2.83
5577 7240 6.142818 TGATGAAAGGTGTTAAGGTTGTTG 57.857 37.500 0.00 0.00 0.00 3.33
5578 7241 5.888724 TGATGAAAGGTGTTAAGGTTGTTGA 59.111 36.000 0.00 0.00 0.00 3.18
5579 7242 6.378564 TGATGAAAGGTGTTAAGGTTGTTGAA 59.621 34.615 0.00 0.00 0.00 2.69
5580 7243 6.591750 TGAAAGGTGTTAAGGTTGTTGAAA 57.408 33.333 0.00 0.00 0.00 2.69
5581 7244 6.994221 TGAAAGGTGTTAAGGTTGTTGAAAA 58.006 32.000 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 0.774685 CATGTGAGACATCGCGATCG 59.225 55.000 20.85 16.85 36.53 3.69
29 30 1.070821 ACAACATGTGAGACATCGCG 58.929 50.000 0.00 0.00 36.53 5.87
56 57 3.693085 AGAATGTGAAGCAATGCCTACAG 59.307 43.478 0.00 0.00 0.00 2.74
71 72 5.305139 TCAAATGACATGAGCAGAATGTG 57.695 39.130 0.00 0.00 38.37 3.21
72 73 5.562506 CTCAAATGACATGAGCAGAATGT 57.437 39.130 0.00 0.00 40.93 2.71
127 128 0.532417 AGCCGAATCATGAGCTGCTC 60.532 55.000 22.38 22.38 33.41 4.26
130 131 0.249197 TCGAGCCGAATCATGAGCTG 60.249 55.000 11.55 5.23 35.23 4.24
150 151 1.679680 AGTCACCGAGTTCGACTCAAA 59.320 47.619 2.59 0.00 45.30 2.69
152 153 2.174363 TAGTCACCGAGTTCGACTCA 57.826 50.000 2.59 0.00 45.30 3.41
155 156 1.195448 TCGTTAGTCACCGAGTTCGAC 59.805 52.381 2.59 0.00 43.02 4.20
165 166 1.068748 TCGGCTCAACTCGTTAGTCAC 60.069 52.381 0.00 0.00 33.75 3.67
190 195 5.297547 TGTTAACGAGCTCAGATCAAAAGT 58.702 37.500 15.40 0.00 0.00 2.66
191 196 5.845985 TGTTAACGAGCTCAGATCAAAAG 57.154 39.130 15.40 0.00 0.00 2.27
204 209 7.473411 GCTCGTTAAACTTGTTATGTTAACGAG 59.527 37.037 32.50 32.50 46.34 4.18
207 212 6.517374 CGGCTCGTTAAACTTGTTATGTTAAC 59.483 38.462 0.00 0.00 0.00 2.01
211 216 4.309099 TCGGCTCGTTAAACTTGTTATGT 58.691 39.130 0.00 0.00 0.00 2.29
212 217 4.724036 GCTCGGCTCGTTAAACTTGTTATG 60.724 45.833 0.00 0.00 0.00 1.90
213 218 3.370061 GCTCGGCTCGTTAAACTTGTTAT 59.630 43.478 0.00 0.00 0.00 1.89
214 219 2.733026 GCTCGGCTCGTTAAACTTGTTA 59.267 45.455 0.00 0.00 0.00 2.41
215 220 1.529865 GCTCGGCTCGTTAAACTTGTT 59.470 47.619 0.00 0.00 0.00 2.83
216 221 1.145803 GCTCGGCTCGTTAAACTTGT 58.854 50.000 0.00 0.00 0.00 3.16
217 222 1.429463 AGCTCGGCTCGTTAAACTTG 58.571 50.000 0.00 0.00 30.62 3.16
218 223 2.877335 CTAGCTCGGCTCGTTAAACTT 58.123 47.619 1.46 0.00 40.44 2.66
219 224 1.469423 GCTAGCTCGGCTCGTTAAACT 60.469 52.381 7.70 0.00 40.44 2.66
220 225 0.922032 GCTAGCTCGGCTCGTTAAAC 59.078 55.000 7.70 0.00 40.44 2.01
221 226 0.524816 CGCTAGCTCGGCTCGTTAAA 60.525 55.000 13.93 0.00 40.44 1.52
222 227 1.063649 CGCTAGCTCGGCTCGTTAA 59.936 57.895 13.93 0.00 40.44 2.01
223 228 1.773054 CTCGCTAGCTCGGCTCGTTA 61.773 60.000 13.93 0.00 40.44 3.18
224 229 3.114647 CTCGCTAGCTCGGCTCGTT 62.115 63.158 13.93 0.00 40.44 3.85
225 230 3.578272 CTCGCTAGCTCGGCTCGT 61.578 66.667 13.93 0.00 40.44 4.18
226 231 1.773054 TAACTCGCTAGCTCGGCTCG 61.773 60.000 13.93 1.85 40.44 5.03
227 232 0.317186 GTAACTCGCTAGCTCGGCTC 60.317 60.000 13.93 0.00 40.44 4.70
228 233 0.748729 AGTAACTCGCTAGCTCGGCT 60.749 55.000 13.93 3.87 43.41 5.52
229 234 0.317186 GAGTAACTCGCTAGCTCGGC 60.317 60.000 13.93 0.00 0.00 5.54
230 235 0.042013 CGAGTAACTCGCTAGCTCGG 60.042 60.000 13.93 5.09 46.75 4.63
231 236 3.424326 CGAGTAACTCGCTAGCTCG 57.576 57.895 13.93 9.47 46.75 5.03
257 262 9.921637 TGTCCCTTTTAATTAACAAGCTTAATG 57.078 29.630 0.00 0.00 0.00 1.90
258 263 9.923143 GTGTCCCTTTTAATTAACAAGCTTAAT 57.077 29.630 0.00 0.00 0.00 1.40
259 264 8.915036 TGTGTCCCTTTTAATTAACAAGCTTAA 58.085 29.630 0.00 0.00 0.00 1.85
260 265 8.466617 TGTGTCCCTTTTAATTAACAAGCTTA 57.533 30.769 0.00 0.00 0.00 3.09
261 266 7.354751 TGTGTCCCTTTTAATTAACAAGCTT 57.645 32.000 0.00 0.00 0.00 3.74
262 267 6.969993 TGTGTCCCTTTTAATTAACAAGCT 57.030 33.333 0.00 0.00 0.00 3.74
263 268 7.430441 TCTTGTGTCCCTTTTAATTAACAAGC 58.570 34.615 13.76 4.64 41.76 4.01
264 269 9.410556 CATCTTGTGTCCCTTTTAATTAACAAG 57.589 33.333 12.90 12.90 42.80 3.16
265 270 9.137459 TCATCTTGTGTCCCTTTTAATTAACAA 57.863 29.630 0.00 0.00 0.00 2.83
266 271 8.698973 TCATCTTGTGTCCCTTTTAATTAACA 57.301 30.769 0.00 0.00 0.00 2.41
267 272 8.793592 ACTCATCTTGTGTCCCTTTTAATTAAC 58.206 33.333 0.00 0.00 0.00 2.01
268 273 8.934023 ACTCATCTTGTGTCCCTTTTAATTAA 57.066 30.769 0.00 0.00 0.00 1.40
269 274 9.444600 GTACTCATCTTGTGTCCCTTTTAATTA 57.555 33.333 0.00 0.00 0.00 1.40
270 275 8.164070 AGTACTCATCTTGTGTCCCTTTTAATT 58.836 33.333 0.00 0.00 0.00 1.40
271 276 7.690256 AGTACTCATCTTGTGTCCCTTTTAAT 58.310 34.615 0.00 0.00 0.00 1.40
272 277 7.074653 AGTACTCATCTTGTGTCCCTTTTAA 57.925 36.000 0.00 0.00 0.00 1.52
273 278 6.681729 AGTACTCATCTTGTGTCCCTTTTA 57.318 37.500 0.00 0.00 0.00 1.52
274 279 5.568620 AGTACTCATCTTGTGTCCCTTTT 57.431 39.130 0.00 0.00 0.00 2.27
275 280 6.681729 TTAGTACTCATCTTGTGTCCCTTT 57.318 37.500 0.00 0.00 0.00 3.11
276 281 6.875972 ATTAGTACTCATCTTGTGTCCCTT 57.124 37.500 0.00 0.00 0.00 3.95
277 282 8.424918 CAATATTAGTACTCATCTTGTGTCCCT 58.575 37.037 0.00 0.00 0.00 4.20
278 283 7.171678 GCAATATTAGTACTCATCTTGTGTCCC 59.828 40.741 13.58 0.00 0.00 4.46
279 284 7.928706 AGCAATATTAGTACTCATCTTGTGTCC 59.071 37.037 13.58 1.92 0.00 4.02
280 285 8.759641 CAGCAATATTAGTACTCATCTTGTGTC 58.240 37.037 13.58 2.17 0.00 3.67
281 286 8.260818 ACAGCAATATTAGTACTCATCTTGTGT 58.739 33.333 13.58 12.90 0.00 3.72
282 287 8.654230 ACAGCAATATTAGTACTCATCTTGTG 57.346 34.615 13.58 12.48 0.00 3.33
283 288 9.102757 CAACAGCAATATTAGTACTCATCTTGT 57.897 33.333 13.58 3.06 0.00 3.16
284 289 9.317936 TCAACAGCAATATTAGTACTCATCTTG 57.682 33.333 0.00 4.75 0.00 3.02
288 293 9.618890 ACAATCAACAGCAATATTAGTACTCAT 57.381 29.630 0.00 0.00 0.00 2.90
289 294 9.448438 AACAATCAACAGCAATATTAGTACTCA 57.552 29.630 0.00 0.00 0.00 3.41
302 307 9.791820 CTTCATAAATGATAACAATCAACAGCA 57.208 29.630 0.00 0.00 36.56 4.41
303 308 9.793252 ACTTCATAAATGATAACAATCAACAGC 57.207 29.630 0.00 0.00 36.56 4.40
317 322 9.944663 GAAACACTTTGTACACTTCATAAATGA 57.055 29.630 0.00 0.00 34.44 2.57
318 323 9.950680 AGAAACACTTTGTACACTTCATAAATG 57.049 29.630 0.00 0.00 0.00 2.32
323 328 9.174166 ACTAAAGAAACACTTTGTACACTTCAT 57.826 29.630 0.00 0.00 46.62 2.57
324 329 8.447833 CACTAAAGAAACACTTTGTACACTTCA 58.552 33.333 0.00 0.00 46.62 3.02
325 330 8.448615 ACACTAAAGAAACACTTTGTACACTTC 58.551 33.333 0.00 0.00 46.62 3.01
326 331 8.331730 ACACTAAAGAAACACTTTGTACACTT 57.668 30.769 0.00 0.00 46.62 3.16
327 332 7.916914 ACACTAAAGAAACACTTTGTACACT 57.083 32.000 0.00 0.00 46.62 3.55
342 347 9.243637 GCAACAATCAACAATTTACACTAAAGA 57.756 29.630 0.00 0.00 0.00 2.52
343 348 8.207252 CGCAACAATCAACAATTTACACTAAAG 58.793 33.333 0.00 0.00 0.00 1.85
344 349 7.915923 TCGCAACAATCAACAATTTACACTAAA 59.084 29.630 0.00 0.00 0.00 1.85
345 350 7.418408 TCGCAACAATCAACAATTTACACTAA 58.582 30.769 0.00 0.00 0.00 2.24
346 351 6.960468 TCGCAACAATCAACAATTTACACTA 58.040 32.000 0.00 0.00 0.00 2.74
357 362 4.870426 TCTTCCTAGATCGCAACAATCAAC 59.130 41.667 0.00 0.00 0.00 3.18
369 374 9.738832 GTAGACACTTACATTTCTTCCTAGATC 57.261 37.037 0.00 0.00 0.00 2.75
372 377 7.759465 TCGTAGACACTTACATTTCTTCCTAG 58.241 38.462 0.00 0.00 0.00 3.02
374 379 6.585695 TCGTAGACACTTACATTTCTTCCT 57.414 37.500 0.00 0.00 0.00 3.36
375 380 7.829378 ATTCGTAGACACTTACATTTCTTCC 57.171 36.000 0.00 0.00 34.32 3.46
446 451 4.262079 GCTAGTCAACCTCGCTATAACCAT 60.262 45.833 0.00 0.00 0.00 3.55
469 475 3.195698 GCGGGCCAGCTCGTTTAG 61.196 66.667 21.61 0.00 42.73 1.85
477 483 4.752879 TGTAACTCGCGGGCCAGC 62.753 66.667 18.93 18.93 0.00 4.85
478 484 2.813908 GTGTAACTCGCGGGCCAG 60.814 66.667 5.51 0.00 0.00 4.85
489 495 2.334838 ACTCGGCTCGATTTGTGTAAC 58.665 47.619 0.00 0.00 34.61 2.50
528 534 2.824347 GTCGGTTTGACTCGTTAACG 57.176 50.000 21.85 21.85 44.58 3.18
538 544 5.416083 AGATAACGAATCATGTCGGTTTGA 58.584 37.500 10.11 0.00 45.40 2.69
548 554 9.817809 TTAGAGCTTGTTAAGATAACGAATCAT 57.182 29.630 0.00 0.00 37.03 2.45
550 556 8.260550 CGTTAGAGCTTGTTAAGATAACGAATC 58.739 37.037 18.57 0.00 42.70 2.52
602 608 1.623811 GAGAGCACAAGTAAGGGTGGA 59.376 52.381 0.00 0.00 35.58 4.02
614 620 1.418637 AGTTTTTACCCGGAGAGCACA 59.581 47.619 0.73 0.00 0.00 4.57
615 621 2.074576 GAGTTTTTACCCGGAGAGCAC 58.925 52.381 0.73 0.00 0.00 4.40
623 629 3.186613 GTGAGAGCTTGAGTTTTTACCCG 59.813 47.826 0.00 0.00 0.00 5.28
630 636 1.141657 TGCAGGTGAGAGCTTGAGTTT 59.858 47.619 0.00 0.00 0.00 2.66
631 637 0.761187 TGCAGGTGAGAGCTTGAGTT 59.239 50.000 0.00 0.00 0.00 3.01
632 638 0.761187 TTGCAGGTGAGAGCTTGAGT 59.239 50.000 0.00 0.00 0.00 3.41
633 639 1.155042 GTTGCAGGTGAGAGCTTGAG 58.845 55.000 0.00 0.00 0.00 3.02
634 640 0.601046 CGTTGCAGGTGAGAGCTTGA 60.601 55.000 0.00 0.00 0.00 3.02
635 641 1.572085 CCGTTGCAGGTGAGAGCTTG 61.572 60.000 0.00 0.00 0.00 4.01
636 642 1.302033 CCGTTGCAGGTGAGAGCTT 60.302 57.895 0.00 0.00 0.00 3.74
637 643 2.345244 CCGTTGCAGGTGAGAGCT 59.655 61.111 0.00 0.00 0.00 4.09
638 644 2.743928 CCCGTTGCAGGTGAGAGC 60.744 66.667 0.00 0.00 0.00 4.09
639 645 0.535102 AAACCCGTTGCAGGTGAGAG 60.535 55.000 0.00 0.00 37.78 3.20
640 646 0.817634 CAAACCCGTTGCAGGTGAGA 60.818 55.000 0.00 0.00 37.78 3.27
641 647 1.654220 CAAACCCGTTGCAGGTGAG 59.346 57.895 0.00 0.00 37.78 3.51
642 648 1.826054 CCAAACCCGTTGCAGGTGA 60.826 57.895 0.00 0.00 37.78 4.02
643 649 2.727544 CCAAACCCGTTGCAGGTG 59.272 61.111 0.00 0.00 37.78 4.00
644 650 2.520741 CCCAAACCCGTTGCAGGT 60.521 61.111 0.00 0.00 40.14 4.00
645 651 2.203422 TCCCAAACCCGTTGCAGG 60.203 61.111 0.00 0.00 35.74 4.85
646 652 2.268076 CCTCCCAAACCCGTTGCAG 61.268 63.158 0.00 0.00 35.74 4.41
647 653 2.203422 CCTCCCAAACCCGTTGCA 60.203 61.111 0.00 0.00 35.74 4.08
648 654 1.396607 AAACCTCCCAAACCCGTTGC 61.397 55.000 0.00 0.00 35.74 4.17
649 655 0.387565 CAAACCTCCCAAACCCGTTG 59.612 55.000 0.00 0.00 36.94 4.10
650 656 0.757561 CCAAACCTCCCAAACCCGTT 60.758 55.000 0.00 0.00 0.00 4.44
651 657 1.152631 CCAAACCTCCCAAACCCGT 60.153 57.895 0.00 0.00 0.00 5.28
652 658 1.906333 CCCAAACCTCCCAAACCCG 60.906 63.158 0.00 0.00 0.00 5.28
653 659 1.535444 CCCCAAACCTCCCAAACCC 60.535 63.158 0.00 0.00 0.00 4.11
654 660 1.535444 CCCCCAAACCTCCCAAACC 60.535 63.158 0.00 0.00 0.00 3.27
655 661 2.214216 GCCCCCAAACCTCCCAAAC 61.214 63.158 0.00 0.00 0.00 2.93
656 662 1.967343 AAGCCCCCAAACCTCCCAAA 61.967 55.000 0.00 0.00 0.00 3.28
657 663 1.967343 AAAGCCCCCAAACCTCCCAA 61.967 55.000 0.00 0.00 0.00 4.12
658 664 2.408203 AAAGCCCCCAAACCTCCCA 61.408 57.895 0.00 0.00 0.00 4.37
659 665 1.913262 CAAAGCCCCCAAACCTCCC 60.913 63.158 0.00 0.00 0.00 4.30
660 666 0.762842 AACAAAGCCCCCAAACCTCC 60.763 55.000 0.00 0.00 0.00 4.30
661 667 1.128200 AAACAAAGCCCCCAAACCTC 58.872 50.000 0.00 0.00 0.00 3.85
662 668 2.043992 GTAAACAAAGCCCCCAAACCT 58.956 47.619 0.00 0.00 0.00 3.50
685 691 3.617284 CACGGGCTAGGAAAAAGGTTAT 58.383 45.455 0.00 0.00 0.00 1.89
686 692 2.876892 GCACGGGCTAGGAAAAAGGTTA 60.877 50.000 0.00 0.00 36.96 2.85
687 693 1.905637 CACGGGCTAGGAAAAAGGTT 58.094 50.000 0.00 0.00 0.00 3.50
688 694 0.608308 GCACGGGCTAGGAAAAAGGT 60.608 55.000 0.00 0.00 36.96 3.50
689 695 1.644786 CGCACGGGCTAGGAAAAAGG 61.645 60.000 8.62 0.00 38.10 3.11
690 696 0.953960 ACGCACGGGCTAGGAAAAAG 60.954 55.000 8.62 0.00 38.10 2.27
691 697 0.952010 GACGCACGGGCTAGGAAAAA 60.952 55.000 8.62 0.00 38.10 1.94
692 698 1.375013 GACGCACGGGCTAGGAAAA 60.375 57.895 8.62 0.00 38.10 2.29
693 699 2.263540 GACGCACGGGCTAGGAAA 59.736 61.111 8.62 0.00 38.10 3.13
694 700 4.124351 CGACGCACGGGCTAGGAA 62.124 66.667 8.62 0.00 38.10 3.36
723 729 5.174035 CGACAAAACCAACAATTTGCGATAA 59.826 36.000 0.00 0.00 39.55 1.75
727 733 2.034170 CCGACAAAACCAACAATTTGCG 60.034 45.455 0.00 0.00 39.55 4.85
760 766 9.674068 TGTACACAGCCAGTCATAAAAATAATA 57.326 29.630 0.00 0.00 0.00 0.98
761 767 8.574251 TGTACACAGCCAGTCATAAAAATAAT 57.426 30.769 0.00 0.00 0.00 1.28
762 768 7.987750 TGTACACAGCCAGTCATAAAAATAA 57.012 32.000 0.00 0.00 0.00 1.40
763 769 8.574251 AATGTACACAGCCAGTCATAAAAATA 57.426 30.769 0.00 0.00 0.00 1.40
764 770 7.466746 AATGTACACAGCCAGTCATAAAAAT 57.533 32.000 0.00 0.00 0.00 1.82
778 784 9.424319 ACAGTCTAGACATAAAAATGTACACAG 57.576 33.333 24.44 0.00 34.45 3.66
798 804 8.646004 ACACATATCAATATCAAGCTACAGTCT 58.354 33.333 0.00 0.00 0.00 3.24
799 805 8.824159 ACACATATCAATATCAAGCTACAGTC 57.176 34.615 0.00 0.00 0.00 3.51
800 806 8.424133 TGACACATATCAATATCAAGCTACAGT 58.576 33.333 0.00 0.00 0.00 3.55
801 807 8.822652 TGACACATATCAATATCAAGCTACAG 57.177 34.615 0.00 0.00 0.00 2.74
804 810 9.783081 ACAATGACACATATCAATATCAAGCTA 57.217 29.630 0.00 0.00 30.82 3.32
858 865 3.385111 TGTCAATTACGCCCAACCTTTTT 59.615 39.130 0.00 0.00 0.00 1.94
859 866 2.959707 TGTCAATTACGCCCAACCTTTT 59.040 40.909 0.00 0.00 0.00 2.27
860 867 2.588620 TGTCAATTACGCCCAACCTTT 58.411 42.857 0.00 0.00 0.00 3.11
861 868 2.279935 TGTCAATTACGCCCAACCTT 57.720 45.000 0.00 0.00 0.00 3.50
862 869 2.507407 ATGTCAATTACGCCCAACCT 57.493 45.000 0.00 0.00 0.00 3.50
863 870 4.911514 ATTATGTCAATTACGCCCAACC 57.088 40.909 0.00 0.00 0.00 3.77
864 871 6.588373 ACAAAATTATGTCAATTACGCCCAAC 59.412 34.615 0.00 0.00 0.00 3.77
865 872 6.692486 ACAAAATTATGTCAATTACGCCCAA 58.308 32.000 0.00 0.00 0.00 4.12
866 873 6.274157 ACAAAATTATGTCAATTACGCCCA 57.726 33.333 0.00 0.00 0.00 5.36
867 874 8.865590 AATACAAAATTATGTCAATTACGCCC 57.134 30.769 0.00 0.00 34.75 6.13
927 936 3.869065 CCCTTTGTCGGCTACTTGAATA 58.131 45.455 0.00 0.00 0.00 1.75
983 992 1.134670 CGTGGAGTGAAGAGGGAATCC 60.135 57.143 0.00 0.00 0.00 3.01
1017 1031 3.217017 CGGCGATCGGGGAGAAGA 61.217 66.667 18.30 0.00 34.75 2.87
1019 1033 3.524606 GACGGCGATCGGGGAGAA 61.525 66.667 16.62 0.00 44.45 2.87
1093 1110 3.838271 TGCGACAGGCCGGAGATC 61.838 66.667 10.86 0.00 42.61 2.75
1433 1455 2.670934 AAGGAGCGCACCTTGCAG 60.671 61.111 34.05 0.00 46.85 4.41
1453 1475 4.840115 TGGAATGAAAAGAAGGAAGCCAAT 59.160 37.500 0.00 0.00 0.00 3.16
1490 1516 6.472887 TCTAAACAATCCGATCTGACCTTTT 58.527 36.000 0.00 0.00 0.00 2.27
1492 1518 5.677319 TCTAAACAATCCGATCTGACCTT 57.323 39.130 0.00 0.00 0.00 3.50
1493 1519 5.129485 ACATCTAAACAATCCGATCTGACCT 59.871 40.000 0.00 0.00 0.00 3.85
1494 1520 5.235186 CACATCTAAACAATCCGATCTGACC 59.765 44.000 0.00 0.00 0.00 4.02
1495 1521 5.235186 CCACATCTAAACAATCCGATCTGAC 59.765 44.000 0.00 0.00 0.00 3.51
1497 1523 5.359756 TCCACATCTAAACAATCCGATCTG 58.640 41.667 0.00 0.00 0.00 2.90
1570 1596 3.260380 CCAGCTCAAGATATCCCGATCTT 59.740 47.826 0.00 0.00 45.17 2.40
1576 1602 4.706842 TTAACCCAGCTCAAGATATCCC 57.293 45.455 0.00 0.00 0.00 3.85
1635 1661 1.466856 TGCAGATCCCACAGCAATTC 58.533 50.000 0.00 0.00 33.48 2.17
1706 1762 1.345741 TGGAAGGAGTGAGAAGTGCTG 59.654 52.381 0.00 0.00 0.00 4.41
1770 1833 2.127003 GTGCGCCGGCTAAACAAC 60.127 61.111 26.68 9.43 40.82 3.32
1859 1925 0.107945 CTTCACCTCTAGGGCAGCAC 60.108 60.000 0.20 0.00 40.27 4.40
2157 2225 0.521291 GTCAAGCAATGCCACGCTTA 59.479 50.000 0.00 0.00 46.47 3.09
2204 2272 2.222227 AGCTCCTTTTCCATTGGTCC 57.778 50.000 1.86 0.00 0.00 4.46
2232 2300 4.262617 TCAGGCCGTAGAGCTACATATAG 58.737 47.826 0.00 0.00 35.87 1.31
2256 2324 2.887151 AATTCAGAGTTGGGTGGGAG 57.113 50.000 0.00 0.00 0.00 4.30
2293 2361 5.805994 GGTAGAAGTTCAGTTACAATCCTCG 59.194 44.000 5.50 0.00 0.00 4.63
2336 2404 6.711277 TCTCTGCACTACATAATTCCTTTGT 58.289 36.000 0.00 0.00 0.00 2.83
2399 2497 8.552296 AGGAGTGATCCAATATAAAAACAGAGT 58.448 33.333 0.00 0.00 0.00 3.24
2412 2510 3.726557 TCAAGCAAGGAGTGATCCAAT 57.273 42.857 0.00 0.00 0.00 3.16
2418 2516 8.469200 CCAATTATAATTTCAAGCAAGGAGTGA 58.531 33.333 8.01 0.00 0.00 3.41
2497 2595 2.347731 GTTGCTAGCTACAACCAGGAC 58.652 52.381 22.06 0.00 41.22 3.85
2529 2627 0.961019 TACTGCAAAAGCAGCTTGGG 59.039 50.000 16.62 5.15 41.12 4.12
2724 2829 7.951347 ATTTTGCTACTTCTTCCTTGATCAT 57.049 32.000 0.00 0.00 0.00 2.45
2798 2903 2.619147 CATCTGCTCTCTCCACTTGTG 58.381 52.381 0.00 0.00 0.00 3.33
2880 2985 3.809832 AGACATGTGCTTATGGTATTCGC 59.190 43.478 1.15 0.00 32.32 4.70
2927 3032 1.168714 GTTAGCCCTGCCTGACTTTG 58.831 55.000 0.00 0.00 0.00 2.77
2970 3075 4.300803 GCAAGATGCATTCAACACTCAAA 58.699 39.130 0.00 0.00 44.26 2.69
3029 3135 4.462133 AGGAGATTCATCCAGAATGCAAG 58.538 43.478 0.00 0.00 46.76 4.01
3053 3159 2.773993 TTAAGCCTCCCTGGTTAACG 57.226 50.000 0.00 0.00 38.35 3.18
3167 3284 3.845398 TCATTGCAAATCCCTCCCAAATT 59.155 39.130 1.71 0.00 0.00 1.82
3230 3347 5.009010 AGTTTTGACCTCTAAACACATGCAG 59.991 40.000 12.75 0.00 41.65 4.41
3245 4411 3.477210 AGTCAGAGGTGAGTTTTGACC 57.523 47.619 0.00 0.00 39.08 4.02
3259 4425 9.597170 CTCAAATAATTCTGAGATGAAGTCAGA 57.403 33.333 6.35 0.00 46.97 3.27
3293 4459 6.404184 GCTTCAGCTTCTAGAAGGAAAATTCC 60.404 42.308 29.22 13.02 41.13 3.01
3336 4502 5.496556 TCAAGTTCAGTTCAACTTTCCAGA 58.503 37.500 0.00 0.00 42.81 3.86
3514 4684 4.627467 CCTTGATCTCTAGTGTTCAAACCG 59.373 45.833 15.50 7.56 0.00 4.44
3547 4721 6.753107 TCTCGAAATTTAATCCAACCTTCC 57.247 37.500 0.00 0.00 0.00 3.46
3722 4900 4.882671 ATAGGAACAAATACTTGCAGCG 57.117 40.909 0.00 0.00 35.84 5.18
3843 5021 2.583101 TCCATAACCTGCACCCCAATAA 59.417 45.455 0.00 0.00 0.00 1.40
3851 5029 2.621055 TGTGTTTGTCCATAACCTGCAC 59.379 45.455 0.00 0.00 0.00 4.57
3970 5148 3.646162 TCTTCACTAAGGCAAGAGTTGGA 59.354 43.478 0.00 0.00 33.22 3.53
3983 5161 2.875933 CAACCTTGGCGTTCTTCACTAA 59.124 45.455 0.00 0.00 0.00 2.24
3994 5172 2.355756 CACATAATCCTCAACCTTGGCG 59.644 50.000 0.00 0.00 0.00 5.69
4070 5248 2.427232 TAGTTACACACACGCCTGAC 57.573 50.000 0.00 0.00 0.00 3.51
4099 5279 6.381498 TCATCAAATCCAACCTGGTAGTAA 57.619 37.500 0.00 0.00 39.03 2.24
4389 5569 1.976478 TTCAAATCGCCATCGCCACG 61.976 55.000 0.00 0.00 35.26 4.94
4489 5669 2.548480 GTCCTGCTAGCAACGAAAAACT 59.452 45.455 19.86 0.00 0.00 2.66
4522 5702 5.122239 TCATCGATTTTCTGACAATCACACC 59.878 40.000 14.79 0.00 31.07 4.16
4523 5703 6.017933 GTCATCGATTTTCTGACAATCACAC 58.982 40.000 14.79 3.93 39.24 3.82
4532 5712 7.151976 TGTCAAGTAAGTCATCGATTTTCTGA 58.848 34.615 0.00 0.00 0.00 3.27
4550 5730 7.775561 GGGTATCATTTTATCTCCTTGTCAAGT 59.224 37.037 11.61 0.00 0.00 3.16
4560 5740 6.183360 CGCGAATCAGGGTATCATTTTATCTC 60.183 42.308 0.00 0.00 0.00 2.75
4565 5745 3.804036 TCGCGAATCAGGGTATCATTTT 58.196 40.909 6.20 0.00 0.00 1.82
4598 5778 0.531974 TAACTTCCATCCGCATCCGC 60.532 55.000 0.00 0.00 0.00 5.54
4599 5779 1.800586 CATAACTTCCATCCGCATCCG 59.199 52.381 0.00 0.00 0.00 4.18
4600 5780 2.808543 GTCATAACTTCCATCCGCATCC 59.191 50.000 0.00 0.00 0.00 3.51
4601 5781 3.466836 TGTCATAACTTCCATCCGCATC 58.533 45.455 0.00 0.00 0.00 3.91
4602 5782 3.558931 TGTCATAACTTCCATCCGCAT 57.441 42.857 0.00 0.00 0.00 4.73
4643 5823 3.886505 ACATAGTTAGAGGCCTTCTCGAG 59.113 47.826 6.77 5.93 46.82 4.04
4644 5824 3.632604 CACATAGTTAGAGGCCTTCTCGA 59.367 47.826 6.77 0.00 46.82 4.04
4645 5825 3.797184 GCACATAGTTAGAGGCCTTCTCG 60.797 52.174 6.77 1.92 46.82 4.04
4646 5826 3.386402 AGCACATAGTTAGAGGCCTTCTC 59.614 47.826 6.77 0.00 42.75 2.87
4647 5827 3.379452 AGCACATAGTTAGAGGCCTTCT 58.621 45.455 6.77 8.42 40.06 2.85
4648 5828 3.386402 AGAGCACATAGTTAGAGGCCTTC 59.614 47.826 6.77 0.00 0.00 3.46
4649 5829 3.379452 AGAGCACATAGTTAGAGGCCTT 58.621 45.455 6.77 0.00 0.00 4.35
4650 5830 3.039252 AGAGCACATAGTTAGAGGCCT 57.961 47.619 3.86 3.86 0.00 5.19
4651 5831 3.118592 ACAAGAGCACATAGTTAGAGGCC 60.119 47.826 0.00 0.00 0.00 5.19
4652 5832 4.130286 ACAAGAGCACATAGTTAGAGGC 57.870 45.455 0.00 0.00 0.00 4.70
4653 5833 6.701145 TCTACAAGAGCACATAGTTAGAGG 57.299 41.667 0.00 0.00 0.00 3.69
4743 5923 6.745450 ACGCAGCATTGTTGTACATAATTTAC 59.255 34.615 0.00 0.00 0.00 2.01
4750 5930 2.426522 AGACGCAGCATTGTTGTACAT 58.573 42.857 0.00 0.00 0.00 2.29
4767 5947 0.249398 AATGCCGTCCACCAGTAGAC 59.751 55.000 0.00 0.00 0.00 2.59
4792 5981 2.936919 TGTCACTTCTTCATGTGGCT 57.063 45.000 0.00 0.00 39.30 4.75
4914 6156 5.966742 AAATAAGCCTTGAGAAGTGTTCC 57.033 39.130 0.00 0.00 0.00 3.62
4990 6232 6.747280 CGAAAGGTGACCATCAATATTGTTTC 59.253 38.462 14.97 12.11 0.00 2.78
4995 6237 5.496556 TGACGAAAGGTGACCATCAATATT 58.503 37.500 3.63 0.00 0.00 1.28
5000 6242 4.161377 TCATATGACGAAAGGTGACCATCA 59.839 41.667 3.63 0.00 0.00 3.07
5006 6248 8.879759 GTCTTAAAATCATATGACGAAAGGTGA 58.120 33.333 7.78 0.00 0.00 4.02
5012 6254 9.430623 TCACAAGTCTTAAAATCATATGACGAA 57.569 29.630 7.78 0.00 35.94 3.85
5013 6255 8.869897 GTCACAAGTCTTAAAATCATATGACGA 58.130 33.333 7.78 0.00 35.94 4.20
5014 6256 8.655970 TGTCACAAGTCTTAAAATCATATGACG 58.344 33.333 7.78 0.00 35.94 4.35
5020 6262 8.306761 GGGAAATGTCACAAGTCTTAAAATCAT 58.693 33.333 0.00 0.00 0.00 2.45
5021 6263 7.286546 TGGGAAATGTCACAAGTCTTAAAATCA 59.713 33.333 0.00 0.00 32.88 2.57
5022 6264 7.657336 TGGGAAATGTCACAAGTCTTAAAATC 58.343 34.615 0.00 0.00 32.88 2.17
5023 6265 7.595819 TGGGAAATGTCACAAGTCTTAAAAT 57.404 32.000 0.00 0.00 32.88 1.82
5024 6266 7.411486 TTGGGAAATGTCACAAGTCTTAAAA 57.589 32.000 0.00 0.00 42.40 1.52
5041 6283 7.493971 CACACATAAAAAGTGACATTTGGGAAA 59.506 33.333 0.00 0.00 40.16 3.13
5070 6312 9.416794 CGATGTAATCTAAAGCATCATACTCTT 57.583 33.333 0.00 0.00 42.58 2.85
5071 6313 8.031864 CCGATGTAATCTAAAGCATCATACTCT 58.968 37.037 0.00 0.00 42.58 3.24
5119 6760 7.343057 ACCAAAGAGATCCTCAAAGTTCTTTTT 59.657 33.333 0.90 0.00 33.86 1.94
5175 6818 7.408756 TCTTACAGGCGGATAACTAACTTTA 57.591 36.000 0.00 0.00 0.00 1.85
5191 6849 6.434340 AGCATTAGGGAAAACTTTCTTACAGG 59.566 38.462 2.41 0.00 37.35 4.00
5218 6876 3.064207 CACGTGTTATGCACCAACTAGT 58.936 45.455 7.58 9.91 44.97 2.57
5273 6932 1.317613 TGACATTTGGACAGGCACAC 58.682 50.000 0.00 0.00 0.00 3.82
5274 6933 2.064434 TTGACATTTGGACAGGCACA 57.936 45.000 0.00 0.00 0.00 4.57
5278 6937 6.435430 TTCGAATATTGACATTTGGACAGG 57.565 37.500 0.00 0.00 0.00 4.00
5316 6979 3.698040 CCATCAGTGAAGCTAAAGCCATT 59.302 43.478 0.00 0.00 43.38 3.16
5317 6980 3.285484 CCATCAGTGAAGCTAAAGCCAT 58.715 45.455 0.00 0.00 43.38 4.40
5327 6990 2.486472 ACAAGAGGCCATCAGTGAAG 57.514 50.000 5.01 0.00 0.00 3.02
5333 6996 4.335416 CCTTTTCTTACAAGAGGCCATCA 58.665 43.478 5.01 0.00 36.22 3.07
5339 7002 3.569701 TGCTTGCCTTTTCTTACAAGAGG 59.430 43.478 5.82 0.00 41.59 3.69
5343 7006 5.163468 TGTGAATGCTTGCCTTTTCTTACAA 60.163 36.000 0.00 0.00 0.00 2.41
5344 7007 4.340666 TGTGAATGCTTGCCTTTTCTTACA 59.659 37.500 0.00 0.00 0.00 2.41
5345 7008 4.870363 TGTGAATGCTTGCCTTTTCTTAC 58.130 39.130 0.00 0.00 0.00 2.34
5346 7009 5.528043 TTGTGAATGCTTGCCTTTTCTTA 57.472 34.783 0.00 0.00 0.00 2.10
5347 7010 4.405116 TTGTGAATGCTTGCCTTTTCTT 57.595 36.364 0.00 0.00 0.00 2.52
5348 7011 4.405116 TTTGTGAATGCTTGCCTTTTCT 57.595 36.364 0.00 0.00 0.00 2.52
5349 7012 5.695816 TGTATTTGTGAATGCTTGCCTTTTC 59.304 36.000 0.00 0.00 0.00 2.29
5350 7013 5.609423 TGTATTTGTGAATGCTTGCCTTTT 58.391 33.333 0.00 0.00 0.00 2.27
5351 7014 5.212532 TGTATTTGTGAATGCTTGCCTTT 57.787 34.783 0.00 0.00 0.00 3.11
5352 7015 4.870123 TGTATTTGTGAATGCTTGCCTT 57.130 36.364 0.00 0.00 0.00 4.35
5353 7016 6.528537 TTATGTATTTGTGAATGCTTGCCT 57.471 33.333 0.00 0.00 0.00 4.75
5354 7017 6.813152 ACTTTATGTATTTGTGAATGCTTGCC 59.187 34.615 0.00 0.00 0.00 4.52
5355 7018 7.816945 ACTTTATGTATTTGTGAATGCTTGC 57.183 32.000 0.00 0.00 0.00 4.01
5383 7046 8.110612 CGTTGTATGCAATGTAACAAACAAAAA 58.889 29.630 7.52 0.00 42.70 1.94
5384 7047 7.613146 CGTTGTATGCAATGTAACAAACAAAA 58.387 30.769 7.52 0.00 42.70 2.44
5385 7048 6.291849 GCGTTGTATGCAATGTAACAAACAAA 60.292 34.615 15.87 0.00 42.70 2.83
5386 7049 5.174035 GCGTTGTATGCAATGTAACAAACAA 59.826 36.000 15.87 0.00 42.70 2.83
5387 7050 4.677378 GCGTTGTATGCAATGTAACAAACA 59.323 37.500 15.87 0.00 42.13 2.83
5388 7051 4.915085 AGCGTTGTATGCAATGTAACAAAC 59.085 37.500 15.87 0.00 42.13 2.93
5389 7052 5.114785 AGCGTTGTATGCAATGTAACAAA 57.885 34.783 15.87 0.00 42.13 2.83
5390 7053 4.757799 AGCGTTGTATGCAATGTAACAA 57.242 36.364 15.87 0.00 42.13 2.83
5391 7054 7.571892 CATATAGCGTTGTATGCAATGTAACA 58.428 34.615 15.87 2.20 42.13 2.41
5392 7055 7.993238 CATATAGCGTTGTATGCAATGTAAC 57.007 36.000 15.87 1.49 42.13 2.50
5406 7069 7.538575 AGAAACAATTCAAAGCATATAGCGTT 58.461 30.769 0.00 0.00 46.01 4.84
5407 7070 7.088589 AGAAACAATTCAAAGCATATAGCGT 57.911 32.000 0.00 0.00 42.60 5.07
5408 7071 8.338259 AGTAGAAACAATTCAAAGCATATAGCG 58.662 33.333 0.00 0.00 42.60 4.26
5414 7077 9.630098 CATGTAAGTAGAAACAATTCAAAGCAT 57.370 29.630 0.00 0.00 38.06 3.79
5415 7078 8.629158 ACATGTAAGTAGAAACAATTCAAAGCA 58.371 29.630 0.00 0.00 38.06 3.91
5416 7079 9.118236 GACATGTAAGTAGAAACAATTCAAAGC 57.882 33.333 0.00 0.00 38.06 3.51
5419 7082 9.554395 TCTGACATGTAAGTAGAAACAATTCAA 57.446 29.630 10.16 0.00 38.06 2.69
5420 7083 9.725019 ATCTGACATGTAAGTAGAAACAATTCA 57.275 29.630 10.16 0.00 38.06 2.57
5452 7115 9.520204 CTGACACAAAGTTTCATCAGTTTATTT 57.480 29.630 10.28 0.00 31.06 1.40
5453 7116 8.902806 TCTGACACAAAGTTTCATCAGTTTATT 58.097 29.630 15.12 0.00 35.98 1.40
5454 7117 8.345565 GTCTGACACAAAGTTTCATCAGTTTAT 58.654 33.333 15.12 0.00 35.98 1.40
5455 7118 7.335673 TGTCTGACACAAAGTTTCATCAGTTTA 59.664 33.333 6.36 5.63 35.98 2.01
5456 7119 6.150976 TGTCTGACACAAAGTTTCATCAGTTT 59.849 34.615 6.36 0.00 35.98 2.66
5457 7120 5.647658 TGTCTGACACAAAGTTTCATCAGTT 59.352 36.000 6.36 0.00 35.98 3.16
5458 7121 5.185454 TGTCTGACACAAAGTTTCATCAGT 58.815 37.500 6.36 0.00 35.98 3.41
5459 7122 5.739752 TGTCTGACACAAAGTTTCATCAG 57.260 39.130 6.36 11.56 35.87 2.90
5473 7136 9.562408 TGTTTACCTTAAATTATGTGTCTGACA 57.438 29.630 6.36 6.36 39.53 3.58
5488 7151 9.738832 GTTTTAGCATTCACTTGTTTACCTTAA 57.261 29.630 0.00 0.00 0.00 1.85
5489 7152 8.904834 TGTTTTAGCATTCACTTGTTTACCTTA 58.095 29.630 0.00 0.00 0.00 2.69
5490 7153 7.777095 TGTTTTAGCATTCACTTGTTTACCTT 58.223 30.769 0.00 0.00 0.00 3.50
5491 7154 7.068226 ACTGTTTTAGCATTCACTTGTTTACCT 59.932 33.333 0.00 0.00 0.00 3.08
5492 7155 7.200455 ACTGTTTTAGCATTCACTTGTTTACC 58.800 34.615 0.00 0.00 0.00 2.85
5493 7156 9.724839 TTACTGTTTTAGCATTCACTTGTTTAC 57.275 29.630 0.00 0.00 0.00 2.01
5495 7158 9.816354 ATTTACTGTTTTAGCATTCACTTGTTT 57.184 25.926 0.00 0.00 0.00 2.83
5497 7160 9.893305 GTATTTACTGTTTTAGCATTCACTTGT 57.107 29.630 0.00 0.00 0.00 3.16
5498 7161 9.891828 TGTATTTACTGTTTTAGCATTCACTTG 57.108 29.630 0.00 0.00 0.00 3.16
5500 7163 9.284968 ACTGTATTTACTGTTTTAGCATTCACT 57.715 29.630 0.00 0.00 35.25 3.41
5501 7164 9.329913 CACTGTATTTACTGTTTTAGCATTCAC 57.670 33.333 0.00 0.00 36.42 3.18
5502 7165 8.511321 CCACTGTATTTACTGTTTTAGCATTCA 58.489 33.333 0.00 0.00 36.42 2.57
5503 7166 7.484959 GCCACTGTATTTACTGTTTTAGCATTC 59.515 37.037 0.00 0.00 36.42 2.67
5504 7167 7.040062 TGCCACTGTATTTACTGTTTTAGCATT 60.040 33.333 0.00 0.00 36.42 3.56
5505 7168 6.432783 TGCCACTGTATTTACTGTTTTAGCAT 59.567 34.615 0.00 0.00 36.42 3.79
5506 7169 5.765677 TGCCACTGTATTTACTGTTTTAGCA 59.234 36.000 0.00 3.62 36.42 3.49
5507 7170 6.249035 TGCCACTGTATTTACTGTTTTAGC 57.751 37.500 0.00 1.59 36.42 3.09
5508 7171 7.120579 TCCATGCCACTGTATTTACTGTTTTAG 59.879 37.037 0.00 0.00 36.42 1.85
5509 7172 6.943146 TCCATGCCACTGTATTTACTGTTTTA 59.057 34.615 0.00 0.00 36.42 1.52
5510 7173 5.772672 TCCATGCCACTGTATTTACTGTTTT 59.227 36.000 0.00 0.00 36.42 2.43
5511 7174 5.321102 TCCATGCCACTGTATTTACTGTTT 58.679 37.500 0.00 0.00 36.42 2.83
5512 7175 4.917385 TCCATGCCACTGTATTTACTGTT 58.083 39.130 0.00 0.00 36.42 3.16
5513 7176 4.568072 TCCATGCCACTGTATTTACTGT 57.432 40.909 0.00 0.00 38.64 3.55
5514 7177 7.283127 AGTTTATCCATGCCACTGTATTTACTG 59.717 37.037 0.00 0.00 0.00 2.74
5515 7178 7.346471 AGTTTATCCATGCCACTGTATTTACT 58.654 34.615 0.00 0.00 0.00 2.24
5516 7179 7.568199 AGTTTATCCATGCCACTGTATTTAC 57.432 36.000 0.00 0.00 0.00 2.01
5517 7180 7.831690 TCAAGTTTATCCATGCCACTGTATTTA 59.168 33.333 0.00 0.00 0.00 1.40
5518 7181 6.663093 TCAAGTTTATCCATGCCACTGTATTT 59.337 34.615 0.00 0.00 0.00 1.40
5519 7182 6.186957 TCAAGTTTATCCATGCCACTGTATT 58.813 36.000 0.00 0.00 0.00 1.89
5520 7183 5.754782 TCAAGTTTATCCATGCCACTGTAT 58.245 37.500 0.00 0.00 0.00 2.29
5521 7184 5.172687 TCAAGTTTATCCATGCCACTGTA 57.827 39.130 0.00 0.00 0.00 2.74
5522 7185 4.032960 TCAAGTTTATCCATGCCACTGT 57.967 40.909 0.00 0.00 0.00 3.55
5523 7186 4.260907 CGATCAAGTTTATCCATGCCACTG 60.261 45.833 0.00 0.00 0.00 3.66
5524 7187 3.879295 CGATCAAGTTTATCCATGCCACT 59.121 43.478 0.00 0.00 0.00 4.00
5525 7188 3.627577 ACGATCAAGTTTATCCATGCCAC 59.372 43.478 0.00 0.00 0.00 5.01
5526 7189 3.884895 ACGATCAAGTTTATCCATGCCA 58.115 40.909 0.00 0.00 0.00 4.92
5527 7190 4.452455 CCTACGATCAAGTTTATCCATGCC 59.548 45.833 0.00 0.00 0.00 4.40
5528 7191 4.083802 GCCTACGATCAAGTTTATCCATGC 60.084 45.833 0.00 0.00 0.00 4.06
5529 7192 5.300752 AGCCTACGATCAAGTTTATCCATG 58.699 41.667 0.00 0.00 0.00 3.66
5530 7193 5.552870 AGCCTACGATCAAGTTTATCCAT 57.447 39.130 0.00 0.00 0.00 3.41
5531 7194 6.266786 TCATAGCCTACGATCAAGTTTATCCA 59.733 38.462 0.00 0.00 0.00 3.41
5532 7195 6.688578 TCATAGCCTACGATCAAGTTTATCC 58.311 40.000 0.00 0.00 0.00 2.59
5533 7196 8.029522 TCATCATAGCCTACGATCAAGTTTATC 58.970 37.037 0.00 0.00 0.00 1.75
5534 7197 7.896811 TCATCATAGCCTACGATCAAGTTTAT 58.103 34.615 0.00 0.00 0.00 1.40
5535 7198 7.284919 TCATCATAGCCTACGATCAAGTTTA 57.715 36.000 0.00 0.00 0.00 2.01
5536 7199 6.161855 TCATCATAGCCTACGATCAAGTTT 57.838 37.500 0.00 0.00 0.00 2.66
5537 7200 5.791336 TCATCATAGCCTACGATCAAGTT 57.209 39.130 0.00 0.00 0.00 2.66
5538 7201 5.791336 TTCATCATAGCCTACGATCAAGT 57.209 39.130 0.00 0.00 0.00 3.16
5539 7202 5.636965 CCTTTCATCATAGCCTACGATCAAG 59.363 44.000 0.00 0.00 0.00 3.02
5540 7203 5.070446 ACCTTTCATCATAGCCTACGATCAA 59.930 40.000 0.00 0.00 0.00 2.57
5541 7204 4.588951 ACCTTTCATCATAGCCTACGATCA 59.411 41.667 0.00 0.00 0.00 2.92
5542 7205 4.926238 CACCTTTCATCATAGCCTACGATC 59.074 45.833 0.00 0.00 0.00 3.69
5543 7206 4.345257 ACACCTTTCATCATAGCCTACGAT 59.655 41.667 0.00 0.00 0.00 3.73
5544 7207 3.704566 ACACCTTTCATCATAGCCTACGA 59.295 43.478 0.00 0.00 0.00 3.43
5545 7208 4.060038 ACACCTTTCATCATAGCCTACG 57.940 45.455 0.00 0.00 0.00 3.51
5546 7209 6.483640 CCTTAACACCTTTCATCATAGCCTAC 59.516 42.308 0.00 0.00 0.00 3.18
5547 7210 6.157994 ACCTTAACACCTTTCATCATAGCCTA 59.842 38.462 0.00 0.00 0.00 3.93
5548 7211 5.044846 ACCTTAACACCTTTCATCATAGCCT 60.045 40.000 0.00 0.00 0.00 4.58
5549 7212 5.193679 ACCTTAACACCTTTCATCATAGCC 58.806 41.667 0.00 0.00 0.00 3.93
5550 7213 6.151144 ACAACCTTAACACCTTTCATCATAGC 59.849 38.462 0.00 0.00 0.00 2.97
5551 7214 7.687941 ACAACCTTAACACCTTTCATCATAG 57.312 36.000 0.00 0.00 0.00 2.23
5552 7215 7.721842 TCAACAACCTTAACACCTTTCATCATA 59.278 33.333 0.00 0.00 0.00 2.15
5553 7216 6.549364 TCAACAACCTTAACACCTTTCATCAT 59.451 34.615 0.00 0.00 0.00 2.45
5554 7217 5.888724 TCAACAACCTTAACACCTTTCATCA 59.111 36.000 0.00 0.00 0.00 3.07
5555 7218 6.385649 TCAACAACCTTAACACCTTTCATC 57.614 37.500 0.00 0.00 0.00 2.92
5556 7219 6.783708 TTCAACAACCTTAACACCTTTCAT 57.216 33.333 0.00 0.00 0.00 2.57
5557 7220 6.591750 TTTCAACAACCTTAACACCTTTCA 57.408 33.333 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.