Multiple sequence alignment - TraesCS3B01G431100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G431100 chr3B 100.000 2510 0 0 1 2510 669949934 669952443 0.000000e+00 4636.0
1 TraesCS3B01G431100 chr3B 93.309 269 17 1 451 718 610216161 610216429 1.810000e-106 396.0
2 TraesCS3B01G431100 chr3D 91.559 1161 45 19 724 1873 508072255 508073373 0.000000e+00 1552.0
3 TraesCS3B01G431100 chr3D 92.937 269 18 1 451 718 80265014 80265282 8.420000e-105 390.0
4 TraesCS3B01G431100 chr3D 92.537 268 19 1 452 718 137488368 137488635 1.410000e-102 383.0
5 TraesCS3B01G431100 chr3D 88.014 292 16 14 1978 2256 508073460 508073745 6.690000e-86 327.0
6 TraesCS3B01G431100 chr3D 85.987 157 21 1 5 160 508071170 508071326 1.540000e-37 167.0
7 TraesCS3B01G431100 chr3A 92.625 1044 34 19 713 1755 645634262 645635263 0.000000e+00 1461.0
8 TraesCS3B01G431100 chr3A 92.937 269 18 1 451 718 604497679 604497947 8.420000e-105 390.0
9 TraesCS3B01G431100 chr3A 93.007 143 6 1 2250 2388 552484211 552484353 3.270000e-49 206.0
10 TraesCS3B01G431100 chr3A 79.528 127 20 5 61 186 164778425 164778546 4.450000e-13 86.1
11 TraesCS3B01G431100 chr1A 94.030 268 15 1 452 718 181550153 181550420 3.010000e-109 405.0
12 TraesCS3B01G431100 chr1A 94.286 140 7 1 2250 2388 13965275 13965136 1.960000e-51 213.0
13 TraesCS3B01G431100 chr7B 93.309 269 17 1 451 718 178397873 178398141 1.810000e-106 396.0
14 TraesCS3B01G431100 chr2A 93.309 269 17 1 451 718 535842362 535842094 1.810000e-106 396.0
15 TraesCS3B01G431100 chr2D 93.233 266 17 1 454 718 381559879 381560144 8.420000e-105 390.0
16 TraesCS3B01G431100 chr4D 91.039 279 24 1 441 718 487159776 487160054 2.360000e-100 375.0
17 TraesCS3B01G431100 chr4D 80.315 127 24 1 55 181 509284945 509285070 7.390000e-16 95.3
18 TraesCS3B01G431100 chr1B 82.134 403 68 4 1023 1423 565919755 565920155 2.390000e-90 342.0
19 TraesCS3B01G431100 chr1B 79.433 141 27 2 45 184 96507444 96507583 5.710000e-17 99.0
20 TraesCS3B01G431100 chr5A 95.775 142 5 1 2250 2390 437917825 437917966 6.980000e-56 228.0
21 TraesCS3B01G431100 chr4A 95.139 144 5 2 2250 2391 13770963 13771106 2.510000e-55 226.0
22 TraesCS3B01G431100 chr4A 95.683 139 5 1 2250 2388 691556705 691556568 3.250000e-54 222.0
23 TraesCS3B01G431100 chr6A 92.994 157 6 4 2250 2406 115407633 115407482 9.040000e-55 224.0
24 TraesCS3B01G431100 chr7A 95.070 142 5 2 2250 2390 663805798 663805658 3.250000e-54 222.0
25 TraesCS3B01G431100 chr6B 94.891 137 4 3 2250 2385 169099889 169100023 7.030000e-51 211.0
26 TraesCS3B01G431100 chr6B 93.706 143 5 2 2250 2389 702508207 702508348 7.030000e-51 211.0
27 TraesCS3B01G431100 chr2B 87.500 112 11 3 72 181 197213389 197213499 2.620000e-25 126.0
28 TraesCS3B01G431100 chr7D 86.517 89 11 1 93 181 405876476 405876389 2.060000e-16 97.1
29 TraesCS3B01G431100 chrUn 78.947 133 26 2 53 185 402488755 402488885 3.440000e-14 89.8
30 TraesCS3B01G431100 chr4B 78.947 133 25 3 53 185 657525769 657525640 1.240000e-13 87.9
31 TraesCS3B01G431100 chr1D 78.571 126 23 3 61 184 458476762 458476639 2.070000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G431100 chr3B 669949934 669952443 2509 False 4636 4636 100.000 1 2510 1 chr3B.!!$F2 2509
1 TraesCS3B01G431100 chr3D 508071170 508073745 2575 False 682 1552 88.520 5 2256 3 chr3D.!!$F3 2251
2 TraesCS3B01G431100 chr3A 645634262 645635263 1001 False 1461 1461 92.625 713 1755 1 chr3A.!!$F4 1042

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
623 1280 0.032815 GGGATTCCAGCTACTCTCGC 59.967 60.0 4.8 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2256 2968 0.111253 CCCTCAGGTCTGCCAGTTTT 59.889 55.0 0.0 0.0 37.19 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 86 2.217750 GCGAAAAGGCCAAAAACCATT 58.782 42.857 5.01 0.00 0.00 3.16
88 90 5.390461 GCGAAAAGGCCAAAAACCATTTATC 60.390 40.000 5.01 0.00 28.73 1.75
160 162 0.969917 TCAAATGATTGGGGGTGCCG 60.970 55.000 0.00 0.00 37.15 5.69
161 163 0.969917 CAAATGATTGGGGGTGCCGA 60.970 55.000 0.00 0.00 32.69 5.54
162 164 0.252012 AAATGATTGGGGGTGCCGAA 60.252 50.000 0.00 0.00 0.00 4.30
163 165 0.684153 AATGATTGGGGGTGCCGAAG 60.684 55.000 0.00 0.00 0.00 3.79
164 166 1.863155 ATGATTGGGGGTGCCGAAGT 61.863 55.000 0.00 0.00 0.00 3.01
165 167 1.749258 GATTGGGGGTGCCGAAGTC 60.749 63.158 0.00 0.00 0.00 3.01
166 168 2.198304 GATTGGGGGTGCCGAAGTCT 62.198 60.000 0.00 0.00 0.00 3.24
167 169 1.789576 ATTGGGGGTGCCGAAGTCTT 61.790 55.000 0.00 0.00 0.00 3.01
168 170 2.046217 GGGGGTGCCGAAGTCTTC 60.046 66.667 2.18 2.18 0.00 2.87
169 171 2.593956 GGGGGTGCCGAAGTCTTCT 61.594 63.158 10.81 0.00 0.00 2.85
170 172 1.375326 GGGGTGCCGAAGTCTTCTT 59.625 57.895 10.81 0.00 36.51 2.52
171 173 0.673956 GGGGTGCCGAAGTCTTCTTC 60.674 60.000 10.81 3.04 44.55 2.87
172 174 0.673956 GGGTGCCGAAGTCTTCTTCC 60.674 60.000 10.81 7.19 45.02 3.46
181 183 3.618507 CGAAGTCTTCTTCCTCCTGCATT 60.619 47.826 10.81 0.00 45.02 3.56
184 186 3.328931 AGTCTTCTTCCTCCTGCATTCAA 59.671 43.478 0.00 0.00 0.00 2.69
185 187 4.074970 GTCTTCTTCCTCCTGCATTCAAA 58.925 43.478 0.00 0.00 0.00 2.69
186 188 4.155644 GTCTTCTTCCTCCTGCATTCAAAG 59.844 45.833 0.00 0.00 0.00 2.77
187 189 3.795688 TCTTCCTCCTGCATTCAAAGT 57.204 42.857 0.00 0.00 0.00 2.66
189 191 3.328931 TCTTCCTCCTGCATTCAAAGTCT 59.671 43.478 0.00 0.00 0.00 3.24
190 192 3.795688 TCCTCCTGCATTCAAAGTCTT 57.204 42.857 0.00 0.00 0.00 3.01
192 194 3.328931 TCCTCCTGCATTCAAAGTCTTCT 59.671 43.478 0.00 0.00 0.00 2.85
193 195 4.532126 TCCTCCTGCATTCAAAGTCTTCTA 59.468 41.667 0.00 0.00 0.00 2.10
194 196 5.013079 TCCTCCTGCATTCAAAGTCTTCTAA 59.987 40.000 0.00 0.00 0.00 2.10
195 197 5.707298 CCTCCTGCATTCAAAGTCTTCTAAA 59.293 40.000 0.00 0.00 0.00 1.85
196 198 6.207417 CCTCCTGCATTCAAAGTCTTCTAAAA 59.793 38.462 0.00 0.00 0.00 1.52
221 851 9.921637 AAAAATGTTTCTTACAAGTGTTTCTCA 57.078 25.926 0.00 0.00 40.89 3.27
222 852 9.921637 AAAATGTTTCTTACAAGTGTTTCTCAA 57.078 25.926 0.00 0.00 40.89 3.02
223 853 9.921637 AAATGTTTCTTACAAGTGTTTCTCAAA 57.078 25.926 0.00 0.00 40.89 2.69
224 854 8.911247 ATGTTTCTTACAAGTGTTTCTCAAAC 57.089 30.769 0.00 0.00 40.89 2.93
226 856 8.519526 TGTTTCTTACAAGTGTTTCTCAAACAT 58.480 29.630 5.17 0.00 42.59 2.71
258 888 8.965172 GTATATGTTAGGACACAGATTGTAACG 58.035 37.037 0.00 0.00 39.17 3.18
261 891 5.221283 TGTTAGGACACAGATTGTAACGTGA 60.221 40.000 0.00 0.00 39.17 4.35
264 894 4.220821 AGGACACAGATTGTAACGTGAGAT 59.779 41.667 0.00 0.00 39.17 2.75
265 895 4.327357 GGACACAGATTGTAACGTGAGATG 59.673 45.833 0.00 0.00 39.17 2.90
273 903 4.174411 TGTAACGTGAGATGACTTGAGG 57.826 45.455 0.00 0.00 0.00 3.86
284 914 3.433306 TGACTTGAGGGGGTGTAAATG 57.567 47.619 0.00 0.00 0.00 2.32
289 919 2.964209 TGAGGGGGTGTAAATGCAAAA 58.036 42.857 0.00 0.00 0.00 2.44
290 920 3.309296 TGAGGGGGTGTAAATGCAAAAA 58.691 40.909 0.00 0.00 0.00 1.94
291 921 3.906846 TGAGGGGGTGTAAATGCAAAAAT 59.093 39.130 0.00 0.00 0.00 1.82
294 924 3.342719 GGGGTGTAAATGCAAAAATGGG 58.657 45.455 0.00 0.00 0.00 4.00
295 925 2.746904 GGGTGTAAATGCAAAAATGGGC 59.253 45.455 0.00 0.00 0.00 5.36
296 926 3.558958 GGGTGTAAATGCAAAAATGGGCT 60.559 43.478 0.00 0.00 0.00 5.19
297 927 3.684305 GGTGTAAATGCAAAAATGGGCTC 59.316 43.478 0.00 0.00 0.00 4.70
298 928 4.314121 GTGTAAATGCAAAAATGGGCTCA 58.686 39.130 0.00 0.00 0.00 4.26
299 929 4.937015 GTGTAAATGCAAAAATGGGCTCAT 59.063 37.500 0.00 0.00 34.56 2.90
300 930 4.936411 TGTAAATGCAAAAATGGGCTCATG 59.064 37.500 0.00 0.00 33.18 3.07
390 1047 9.859427 TTTATGCCAAATTGAATAAAGTCTCTG 57.141 29.630 0.00 0.00 0.00 3.35
391 1048 5.713025 TGCCAAATTGAATAAAGTCTCTGC 58.287 37.500 0.00 0.00 0.00 4.26
392 1049 5.243507 TGCCAAATTGAATAAAGTCTCTGCA 59.756 36.000 0.00 0.00 0.00 4.41
393 1050 6.158598 GCCAAATTGAATAAAGTCTCTGCAA 58.841 36.000 0.00 0.00 0.00 4.08
394 1051 6.646240 GCCAAATTGAATAAAGTCTCTGCAAA 59.354 34.615 0.00 0.00 0.00 3.68
395 1052 7.171337 GCCAAATTGAATAAAGTCTCTGCAAAA 59.829 33.333 0.00 0.00 0.00 2.44
396 1053 9.044150 CCAAATTGAATAAAGTCTCTGCAAAAA 57.956 29.630 0.00 0.00 0.00 1.94
457 1114 9.967451 AAAAAGAGGGTTTTAATTGAGGAAAAA 57.033 25.926 0.00 0.00 0.00 1.94
458 1115 9.613428 AAAAGAGGGTTTTAATTGAGGAAAAAG 57.387 29.630 0.00 0.00 0.00 2.27
459 1116 7.914427 AGAGGGTTTTAATTGAGGAAAAAGT 57.086 32.000 0.00 0.00 0.00 2.66
460 1117 8.319057 AGAGGGTTTTAATTGAGGAAAAAGTT 57.681 30.769 0.00 0.00 0.00 2.66
491 1148 5.948992 ACCTTGAAGTTGTAGATGAAAGC 57.051 39.130 0.00 0.00 0.00 3.51
492 1149 5.625150 ACCTTGAAGTTGTAGATGAAAGCT 58.375 37.500 0.00 0.00 35.48 3.74
493 1150 6.769512 ACCTTGAAGTTGTAGATGAAAGCTA 58.230 36.000 0.00 0.00 30.71 3.32
494 1151 7.224297 ACCTTGAAGTTGTAGATGAAAGCTAA 58.776 34.615 0.00 0.00 36.08 3.09
495 1152 7.719633 ACCTTGAAGTTGTAGATGAAAGCTAAA 59.280 33.333 0.00 0.00 36.08 1.85
496 1153 8.734386 CCTTGAAGTTGTAGATGAAAGCTAAAT 58.266 33.333 0.00 0.00 36.08 1.40
497 1154 9.766277 CTTGAAGTTGTAGATGAAAGCTAAATC 57.234 33.333 0.00 0.00 36.08 2.17
498 1155 8.846943 TGAAGTTGTAGATGAAAGCTAAATCA 57.153 30.769 0.00 0.00 36.08 2.57
499 1156 9.283768 TGAAGTTGTAGATGAAAGCTAAATCAA 57.716 29.630 0.00 0.00 36.08 2.57
501 1158 9.899226 AAGTTGTAGATGAAAGCTAAATCAAAC 57.101 29.630 0.00 0.00 36.08 2.93
502 1159 8.515414 AGTTGTAGATGAAAGCTAAATCAAACC 58.485 33.333 0.00 0.00 36.08 3.27
503 1160 7.391148 TGTAGATGAAAGCTAAATCAAACCC 57.609 36.000 0.00 0.00 36.08 4.11
504 1161 7.175104 TGTAGATGAAAGCTAAATCAAACCCT 58.825 34.615 0.00 0.00 36.08 4.34
505 1162 6.521151 AGATGAAAGCTAAATCAAACCCTG 57.479 37.500 0.00 0.00 0.00 4.45
506 1163 6.248433 AGATGAAAGCTAAATCAAACCCTGA 58.752 36.000 0.00 0.00 38.81 3.86
507 1164 6.721208 AGATGAAAGCTAAATCAAACCCTGAA 59.279 34.615 0.00 0.00 37.67 3.02
508 1165 6.084326 TGAAAGCTAAATCAAACCCTGAAC 57.916 37.500 0.00 0.00 37.67 3.18
509 1166 5.833131 TGAAAGCTAAATCAAACCCTGAACT 59.167 36.000 0.00 0.00 37.67 3.01
510 1167 6.323739 TGAAAGCTAAATCAAACCCTGAACTT 59.676 34.615 0.00 0.00 37.67 2.66
511 1168 6.731292 AAGCTAAATCAAACCCTGAACTTT 57.269 33.333 0.00 0.00 37.67 2.66
512 1169 6.089249 AGCTAAATCAAACCCTGAACTTTG 57.911 37.500 0.00 0.00 37.67 2.77
513 1170 5.833131 AGCTAAATCAAACCCTGAACTTTGA 59.167 36.000 0.00 0.00 39.95 2.69
514 1171 6.323739 AGCTAAATCAAACCCTGAACTTTGAA 59.676 34.615 0.00 0.00 39.28 2.69
515 1172 7.015584 AGCTAAATCAAACCCTGAACTTTGAAT 59.984 33.333 0.00 0.00 39.28 2.57
516 1173 7.329471 GCTAAATCAAACCCTGAACTTTGAATC 59.671 37.037 0.00 0.00 39.28 2.52
517 1174 5.728637 ATCAAACCCTGAACTTTGAATCC 57.271 39.130 0.00 0.00 39.28 3.01
518 1175 3.895041 TCAAACCCTGAACTTTGAATCCC 59.105 43.478 0.00 0.00 34.24 3.85
519 1176 3.897505 CAAACCCTGAACTTTGAATCCCT 59.102 43.478 0.00 0.00 30.20 4.20
520 1177 5.076873 CAAACCCTGAACTTTGAATCCCTA 58.923 41.667 0.00 0.00 30.20 3.53
521 1178 5.333566 AACCCTGAACTTTGAATCCCTAA 57.666 39.130 0.00 0.00 0.00 2.69
522 1179 5.333566 ACCCTGAACTTTGAATCCCTAAA 57.666 39.130 0.00 0.00 0.00 1.85
523 1180 5.711698 ACCCTGAACTTTGAATCCCTAAAA 58.288 37.500 0.00 0.00 0.00 1.52
524 1181 6.322931 ACCCTGAACTTTGAATCCCTAAAAT 58.677 36.000 0.00 0.00 0.00 1.82
525 1182 6.787458 ACCCTGAACTTTGAATCCCTAAAATT 59.213 34.615 0.00 0.00 0.00 1.82
526 1183 7.099120 CCCTGAACTTTGAATCCCTAAAATTG 58.901 38.462 0.00 0.00 0.00 2.32
527 1184 7.039082 CCCTGAACTTTGAATCCCTAAAATTGA 60.039 37.037 0.00 0.00 0.00 2.57
528 1185 7.814587 CCTGAACTTTGAATCCCTAAAATTGAC 59.185 37.037 0.00 0.00 0.00 3.18
529 1186 8.243961 TGAACTTTGAATCCCTAAAATTGACA 57.756 30.769 0.00 0.00 0.00 3.58
530 1187 8.141268 TGAACTTTGAATCCCTAAAATTGACAC 58.859 33.333 0.00 0.00 0.00 3.67
531 1188 7.839680 ACTTTGAATCCCTAAAATTGACACT 57.160 32.000 0.00 0.00 0.00 3.55
532 1189 7.886338 ACTTTGAATCCCTAAAATTGACACTC 58.114 34.615 0.00 0.00 0.00 3.51
533 1190 7.725844 ACTTTGAATCCCTAAAATTGACACTCT 59.274 33.333 0.00 0.00 0.00 3.24
534 1191 7.452880 TTGAATCCCTAAAATTGACACTCTG 57.547 36.000 0.00 0.00 0.00 3.35
535 1192 6.778821 TGAATCCCTAAAATTGACACTCTGA 58.221 36.000 0.00 0.00 0.00 3.27
536 1193 7.230747 TGAATCCCTAAAATTGACACTCTGAA 58.769 34.615 0.00 0.00 0.00 3.02
537 1194 7.174946 TGAATCCCTAAAATTGACACTCTGAAC 59.825 37.037 0.00 0.00 0.00 3.18
538 1195 6.187727 TCCCTAAAATTGACACTCTGAACT 57.812 37.500 0.00 0.00 0.00 3.01
539 1196 6.601332 TCCCTAAAATTGACACTCTGAACTT 58.399 36.000 0.00 0.00 0.00 2.66
540 1197 6.486657 TCCCTAAAATTGACACTCTGAACTTG 59.513 38.462 0.00 0.00 0.00 3.16
541 1198 6.263168 CCCTAAAATTGACACTCTGAACTTGT 59.737 38.462 0.00 0.00 0.00 3.16
542 1199 7.444183 CCCTAAAATTGACACTCTGAACTTGTA 59.556 37.037 0.00 0.00 0.00 2.41
543 1200 8.836413 CCTAAAATTGACACTCTGAACTTGTAA 58.164 33.333 0.00 0.00 0.00 2.41
546 1203 7.440523 AATTGACACTCTGAACTTGTAATCC 57.559 36.000 0.00 0.00 0.00 3.01
547 1204 5.808366 TGACACTCTGAACTTGTAATCCT 57.192 39.130 0.00 0.00 0.00 3.24
548 1205 5.541845 TGACACTCTGAACTTGTAATCCTG 58.458 41.667 0.00 0.00 0.00 3.86
549 1206 4.899502 ACACTCTGAACTTGTAATCCTGG 58.100 43.478 0.00 0.00 0.00 4.45
550 1207 4.348168 ACACTCTGAACTTGTAATCCTGGT 59.652 41.667 0.00 0.00 0.00 4.00
551 1208 4.932200 CACTCTGAACTTGTAATCCTGGTC 59.068 45.833 0.00 0.00 0.00 4.02
552 1209 4.841246 ACTCTGAACTTGTAATCCTGGTCT 59.159 41.667 0.00 0.00 0.00 3.85
553 1210 6.017192 ACTCTGAACTTGTAATCCTGGTCTA 58.983 40.000 0.00 0.00 0.00 2.59
554 1211 6.670027 ACTCTGAACTTGTAATCCTGGTCTAT 59.330 38.462 0.00 0.00 0.00 1.98
555 1212 7.181125 ACTCTGAACTTGTAATCCTGGTCTATT 59.819 37.037 0.00 0.00 0.00 1.73
556 1213 7.918076 TCTGAACTTGTAATCCTGGTCTATTT 58.082 34.615 0.00 0.00 0.00 1.40
557 1214 8.383175 TCTGAACTTGTAATCCTGGTCTATTTT 58.617 33.333 0.00 0.00 0.00 1.82
558 1215 8.335532 TGAACTTGTAATCCTGGTCTATTTTG 57.664 34.615 0.00 0.00 0.00 2.44
559 1216 8.160765 TGAACTTGTAATCCTGGTCTATTTTGA 58.839 33.333 0.00 0.00 0.00 2.69
560 1217 8.934023 AACTTGTAATCCTGGTCTATTTTGAA 57.066 30.769 0.00 0.00 0.00 2.69
561 1218 8.336801 ACTTGTAATCCTGGTCTATTTTGAAC 57.663 34.615 0.00 0.00 0.00 3.18
562 1219 7.393515 ACTTGTAATCCTGGTCTATTTTGAACC 59.606 37.037 0.00 0.00 0.00 3.62
563 1220 6.184789 TGTAATCCTGGTCTATTTTGAACCC 58.815 40.000 0.00 0.00 0.00 4.11
564 1221 5.536497 AATCCTGGTCTATTTTGAACCCT 57.464 39.130 0.00 0.00 0.00 4.34
565 1222 6.652205 AATCCTGGTCTATTTTGAACCCTA 57.348 37.500 0.00 0.00 0.00 3.53
566 1223 5.693769 TCCTGGTCTATTTTGAACCCTAG 57.306 43.478 0.00 0.00 0.00 3.02
567 1224 5.347124 TCCTGGTCTATTTTGAACCCTAGA 58.653 41.667 0.00 0.00 0.00 2.43
568 1225 5.189145 TCCTGGTCTATTTTGAACCCTAGAC 59.811 44.000 0.00 0.00 39.44 2.59
572 1229 6.051179 GTCTATTTTGAACCCTAGACCTGT 57.949 41.667 0.00 0.00 35.93 4.00
573 1230 6.473758 GTCTATTTTGAACCCTAGACCTGTT 58.526 40.000 0.00 0.00 35.93 3.16
574 1231 6.940867 GTCTATTTTGAACCCTAGACCTGTTT 59.059 38.462 0.00 0.00 35.93 2.83
575 1232 6.940298 TCTATTTTGAACCCTAGACCTGTTTG 59.060 38.462 0.00 0.00 0.00 2.93
576 1233 3.502123 TTGAACCCTAGACCTGTTTGG 57.498 47.619 0.00 0.00 42.93 3.28
577 1234 1.073284 TGAACCCTAGACCTGTTTGGC 59.927 52.381 0.00 0.00 40.22 4.52
578 1235 0.036306 AACCCTAGACCTGTTTGGCG 59.964 55.000 0.00 0.00 40.22 5.69
579 1236 1.745489 CCCTAGACCTGTTTGGCGC 60.745 63.158 0.00 0.00 40.22 6.53
580 1237 1.003839 CCTAGACCTGTTTGGCGCA 60.004 57.895 10.83 0.00 40.22 6.09
581 1238 1.298859 CCTAGACCTGTTTGGCGCAC 61.299 60.000 10.83 0.00 40.22 5.34
582 1239 0.320771 CTAGACCTGTTTGGCGCACT 60.321 55.000 10.83 0.00 40.22 4.40
583 1240 0.602638 TAGACCTGTTTGGCGCACTG 60.603 55.000 10.83 2.72 40.22 3.66
584 1241 2.906897 ACCTGTTTGGCGCACTGG 60.907 61.111 17.25 17.25 40.22 4.00
585 1242 3.673484 CCTGTTTGGCGCACTGGG 61.673 66.667 10.83 2.25 31.26 4.45
586 1243 2.594303 CTGTTTGGCGCACTGGGA 60.594 61.111 10.83 0.00 0.00 4.37
587 1244 2.124109 TGTTTGGCGCACTGGGAA 60.124 55.556 10.83 0.00 0.00 3.97
588 1245 2.133742 CTGTTTGGCGCACTGGGAAG 62.134 60.000 10.83 0.00 0.00 3.46
589 1246 1.896660 GTTTGGCGCACTGGGAAGA 60.897 57.895 10.83 0.00 0.00 2.87
590 1247 1.152860 TTTGGCGCACTGGGAAGAA 60.153 52.632 10.83 0.00 0.00 2.52
591 1248 0.539438 TTTGGCGCACTGGGAAGAAT 60.539 50.000 10.83 0.00 0.00 2.40
592 1249 0.326595 TTGGCGCACTGGGAAGAATA 59.673 50.000 10.83 0.00 0.00 1.75
593 1250 0.392461 TGGCGCACTGGGAAGAATAC 60.392 55.000 10.83 0.00 0.00 1.89
594 1251 0.392461 GGCGCACTGGGAAGAATACA 60.392 55.000 10.83 0.00 0.00 2.29
595 1252 1.448985 GCGCACTGGGAAGAATACAA 58.551 50.000 0.30 0.00 0.00 2.41
596 1253 2.017049 GCGCACTGGGAAGAATACAAT 58.983 47.619 0.30 0.00 0.00 2.71
597 1254 2.032178 GCGCACTGGGAAGAATACAATC 59.968 50.000 0.30 0.00 0.00 2.67
598 1255 2.614057 CGCACTGGGAAGAATACAATCC 59.386 50.000 0.00 0.00 0.00 3.01
602 1259 1.605753 GGGAAGAATACAATCCCGGC 58.394 55.000 0.00 0.00 43.20 6.13
603 1260 1.605753 GGAAGAATACAATCCCGGCC 58.394 55.000 0.00 0.00 0.00 6.13
604 1261 1.226746 GAAGAATACAATCCCGGCCG 58.773 55.000 21.04 21.04 0.00 6.13
605 1262 0.179029 AAGAATACAATCCCGGCCGG 60.179 55.000 37.99 37.99 0.00 6.13
616 1273 3.546543 CGGCCGGGATTCCAGCTA 61.547 66.667 20.10 0.00 36.69 3.32
617 1274 2.111251 GGCCGGGATTCCAGCTAC 59.889 66.667 2.18 0.02 36.69 3.58
618 1275 2.444256 GGCCGGGATTCCAGCTACT 61.444 63.158 2.18 0.00 36.69 2.57
619 1276 1.069935 GCCGGGATTCCAGCTACTC 59.930 63.158 2.18 0.00 33.72 2.59
620 1277 1.403687 GCCGGGATTCCAGCTACTCT 61.404 60.000 2.18 0.00 33.72 3.24
621 1278 0.676736 CCGGGATTCCAGCTACTCTC 59.323 60.000 4.80 0.00 0.00 3.20
622 1279 0.312416 CGGGATTCCAGCTACTCTCG 59.688 60.000 4.80 0.00 0.00 4.04
623 1280 0.032815 GGGATTCCAGCTACTCTCGC 59.967 60.000 4.80 0.00 0.00 5.03
624 1281 0.318275 GGATTCCAGCTACTCTCGCG 60.318 60.000 0.00 0.00 0.00 5.87
625 1282 0.318275 GATTCCAGCTACTCTCGCGG 60.318 60.000 6.13 0.00 0.00 6.46
626 1283 0.752009 ATTCCAGCTACTCTCGCGGA 60.752 55.000 6.13 1.01 0.00 5.54
627 1284 1.654954 TTCCAGCTACTCTCGCGGAC 61.655 60.000 6.13 0.00 32.64 4.79
628 1285 2.407428 CCAGCTACTCTCGCGGACA 61.407 63.158 6.13 0.00 0.00 4.02
629 1286 1.506718 CAGCTACTCTCGCGGACAA 59.493 57.895 6.13 0.00 0.00 3.18
630 1287 0.524392 CAGCTACTCTCGCGGACAAG 60.524 60.000 6.13 0.00 0.00 3.16
631 1288 0.677098 AGCTACTCTCGCGGACAAGA 60.677 55.000 6.13 0.00 0.00 3.02
632 1289 0.170561 GCTACTCTCGCGGACAAGAA 59.829 55.000 6.13 0.00 0.00 2.52
633 1290 1.202313 GCTACTCTCGCGGACAAGAAT 60.202 52.381 6.13 0.00 0.00 2.40
634 1291 2.735762 GCTACTCTCGCGGACAAGAATT 60.736 50.000 6.13 0.00 0.00 2.17
635 1292 2.457366 ACTCTCGCGGACAAGAATTT 57.543 45.000 6.13 0.00 0.00 1.82
636 1293 2.069273 ACTCTCGCGGACAAGAATTTG 58.931 47.619 6.13 0.00 40.24 2.32
637 1294 1.394917 CTCTCGCGGACAAGAATTTGG 59.605 52.381 6.13 0.00 38.66 3.28
638 1295 0.447801 CTCGCGGACAAGAATTTGGG 59.552 55.000 6.13 0.00 38.66 4.12
639 1296 1.154035 CGCGGACAAGAATTTGGGC 60.154 57.895 0.00 0.00 38.66 5.36
640 1297 1.215382 GCGGACAAGAATTTGGGCC 59.785 57.895 0.00 0.00 38.66 5.80
641 1298 1.506262 CGGACAAGAATTTGGGCCG 59.494 57.895 0.00 5.06 44.19 6.13
642 1299 1.890174 GGACAAGAATTTGGGCCGG 59.110 57.895 0.00 0.00 38.66 6.13
643 1300 1.215382 GACAAGAATTTGGGCCGGC 59.785 57.895 21.18 21.18 38.66 6.13
644 1301 2.225791 GACAAGAATTTGGGCCGGCC 62.226 60.000 38.57 38.57 38.66 6.13
654 1311 3.138128 GGCCGGCCCACATAACAC 61.138 66.667 36.64 5.01 0.00 3.32
655 1312 2.360600 GCCGGCCCACATAACACA 60.361 61.111 18.11 0.00 0.00 3.72
656 1313 1.974343 GCCGGCCCACATAACACAA 60.974 57.895 18.11 0.00 0.00 3.33
657 1314 1.880186 CCGGCCCACATAACACAAC 59.120 57.895 0.00 0.00 0.00 3.32
658 1315 0.891449 CCGGCCCACATAACACAACA 60.891 55.000 0.00 0.00 0.00 3.33
659 1316 0.955178 CGGCCCACATAACACAACAA 59.045 50.000 0.00 0.00 0.00 2.83
660 1317 1.068610 CGGCCCACATAACACAACAAG 60.069 52.381 0.00 0.00 0.00 3.16
661 1318 2.235016 GGCCCACATAACACAACAAGA 58.765 47.619 0.00 0.00 0.00 3.02
662 1319 2.625790 GGCCCACATAACACAACAAGAA 59.374 45.455 0.00 0.00 0.00 2.52
663 1320 3.258123 GGCCCACATAACACAACAAGAAT 59.742 43.478 0.00 0.00 0.00 2.40
664 1321 4.262420 GGCCCACATAACACAACAAGAATT 60.262 41.667 0.00 0.00 0.00 2.17
665 1322 4.923281 GCCCACATAACACAACAAGAATTC 59.077 41.667 0.00 0.00 0.00 2.17
666 1323 5.153513 CCCACATAACACAACAAGAATTCG 58.846 41.667 0.00 0.00 0.00 3.34
667 1324 5.278266 CCCACATAACACAACAAGAATTCGT 60.278 40.000 0.00 0.00 0.00 3.85
668 1325 5.624900 CCACATAACACAACAAGAATTCGTG 59.375 40.000 18.27 18.27 0.00 4.35
669 1326 6.426327 CACATAACACAACAAGAATTCGTGA 58.574 36.000 25.27 4.03 0.00 4.35
670 1327 6.574832 CACATAACACAACAAGAATTCGTGAG 59.425 38.462 25.27 18.61 0.00 3.51
671 1328 4.552166 AACACAACAAGAATTCGTGAGG 57.448 40.909 25.27 18.06 0.00 3.86
672 1329 3.541632 ACACAACAAGAATTCGTGAGGT 58.458 40.909 25.27 18.61 0.00 3.85
673 1330 3.945285 ACACAACAAGAATTCGTGAGGTT 59.055 39.130 25.27 8.79 0.00 3.50
674 1331 4.398044 ACACAACAAGAATTCGTGAGGTTT 59.602 37.500 25.27 13.43 0.00 3.27
675 1332 5.587043 ACACAACAAGAATTCGTGAGGTTTA 59.413 36.000 25.27 0.00 0.00 2.01
676 1333 6.094325 ACACAACAAGAATTCGTGAGGTTTAA 59.906 34.615 25.27 0.00 0.00 1.52
677 1334 6.970043 CACAACAAGAATTCGTGAGGTTTAAA 59.030 34.615 25.27 0.00 0.00 1.52
678 1335 7.486551 CACAACAAGAATTCGTGAGGTTTAAAA 59.513 33.333 25.27 0.00 0.00 1.52
679 1336 8.030106 ACAACAAGAATTCGTGAGGTTTAAAAA 58.970 29.630 25.27 0.00 0.00 1.94
706 1363 8.803201 TGTTCGCACATTTATAAAATTGTTCA 57.197 26.923 1.21 0.13 29.05 3.18
707 1364 9.249457 TGTTCGCACATTTATAAAATTGTTCAA 57.751 25.926 1.21 0.00 29.05 2.69
763 1420 3.071206 GCCAGGCTCTCTGACCGA 61.071 66.667 3.29 0.00 46.18 4.69
764 1421 3.074999 GCCAGGCTCTCTGACCGAG 62.075 68.421 3.29 0.00 46.18 4.63
795 1452 1.530013 CCCACTGGAAGGCAAAGCAG 61.530 60.000 0.00 0.00 39.30 4.24
801 1458 0.675633 GGAAGGCAAAGCAGAGCAAA 59.324 50.000 0.00 0.00 0.00 3.68
802 1459 1.336609 GGAAGGCAAAGCAGAGCAAAG 60.337 52.381 0.00 0.00 0.00 2.77
803 1460 0.033090 AAGGCAAAGCAGAGCAAAGC 59.967 50.000 0.00 0.00 0.00 3.51
804 1461 1.111116 AGGCAAAGCAGAGCAAAGCA 61.111 50.000 0.00 0.00 0.00 3.91
805 1462 0.249573 GGCAAAGCAGAGCAAAGCAA 60.250 50.000 0.00 0.00 0.00 3.91
887 1544 3.806422 GCGCGGCATAAAACCCGT 61.806 61.111 8.83 0.00 45.98 5.28
908 1565 2.041405 CCCCTCTCCTCCACTCCC 60.041 72.222 0.00 0.00 0.00 4.30
912 1569 1.687493 CTCTCCTCCACTCCCCACC 60.687 68.421 0.00 0.00 0.00 4.61
1146 1811 1.144936 CCTCATCTTCCTCCACGCC 59.855 63.158 0.00 0.00 0.00 5.68
1594 2260 4.221342 CAAGATGTGTCGATTTGGTGTTG 58.779 43.478 0.00 0.00 0.00 3.33
1755 2421 2.243810 TGGATTTGGGTACTTGGTTGC 58.756 47.619 0.00 0.00 0.00 4.17
1756 2422 2.243810 GGATTTGGGTACTTGGTTGCA 58.756 47.619 0.00 0.00 0.00 4.08
1757 2423 2.630580 GGATTTGGGTACTTGGTTGCAA 59.369 45.455 0.00 0.00 0.00 4.08
1758 2424 3.306019 GGATTTGGGTACTTGGTTGCAAG 60.306 47.826 0.00 0.00 38.11 4.01
1759 2425 2.445682 TTGGGTACTTGGTTGCAAGT 57.554 45.000 0.00 0.00 46.05 3.16
1760 2426 1.686355 TGGGTACTTGGTTGCAAGTG 58.314 50.000 0.00 0.00 44.26 3.16
1761 2427 0.313987 GGGTACTTGGTTGCAAGTGC 59.686 55.000 0.00 0.00 44.26 4.40
1826 2499 2.545946 GTGTCAGAGTTCTTGCTGGAAC 59.454 50.000 12.25 12.25 44.02 3.62
1854 2527 4.033776 TCCCCCTGGCTCGCTTTG 62.034 66.667 0.00 0.00 0.00 2.77
1860 2533 1.302033 CTGGCTCGCTTTGTCTGGT 60.302 57.895 0.00 0.00 0.00 4.00
1873 2546 1.069204 TGTCTGGTCTGTCTTGAGTGC 59.931 52.381 0.00 0.00 0.00 4.40
1875 2548 0.315251 CTGGTCTGTCTTGAGTGCGA 59.685 55.000 0.00 0.00 0.00 5.10
1876 2549 0.315251 TGGTCTGTCTTGAGTGCGAG 59.685 55.000 0.00 0.00 0.00 5.03
1877 2550 0.315568 GGTCTGTCTTGAGTGCGAGT 59.684 55.000 0.00 0.00 0.00 4.18
1880 2553 1.268079 TCTGTCTTGAGTGCGAGTGAG 59.732 52.381 0.00 0.00 0.00 3.51
1882 2555 1.011451 GTCTTGAGTGCGAGTGAGCC 61.011 60.000 0.00 0.00 36.02 4.70
1884 2557 3.573772 TTGAGTGCGAGTGAGCCGG 62.574 63.158 0.00 0.00 36.02 6.13
1885 2558 3.749064 GAGTGCGAGTGAGCCGGA 61.749 66.667 5.05 0.00 36.02 5.14
1886 2559 3.691744 GAGTGCGAGTGAGCCGGAG 62.692 68.421 5.05 0.00 36.02 4.63
1905 2578 3.091318 CTGGGCAGCTCTATTGGTG 57.909 57.895 0.00 0.00 38.35 4.17
1906 2579 0.254178 CTGGGCAGCTCTATTGGTGT 59.746 55.000 0.00 0.00 37.70 4.16
1907 2580 0.698238 TGGGCAGCTCTATTGGTGTT 59.302 50.000 0.00 0.00 37.70 3.32
1908 2581 1.098050 GGGCAGCTCTATTGGTGTTG 58.902 55.000 0.00 0.00 37.70 3.33
1909 2582 1.098050 GGCAGCTCTATTGGTGTTGG 58.902 55.000 0.00 0.00 37.70 3.77
1910 2583 1.614317 GGCAGCTCTATTGGTGTTGGT 60.614 52.381 0.00 0.00 37.70 3.67
1911 2584 1.470098 GCAGCTCTATTGGTGTTGGTG 59.530 52.381 0.00 0.00 37.70 4.17
1912 2585 2.783135 CAGCTCTATTGGTGTTGGTGT 58.217 47.619 0.00 0.00 0.00 4.16
1913 2586 2.485426 CAGCTCTATTGGTGTTGGTGTG 59.515 50.000 0.00 0.00 0.00 3.82
1914 2587 2.106511 AGCTCTATTGGTGTTGGTGTGT 59.893 45.455 0.00 0.00 0.00 3.72
1915 2588 2.226437 GCTCTATTGGTGTTGGTGTGTG 59.774 50.000 0.00 0.00 0.00 3.82
1916 2589 2.813754 CTCTATTGGTGTTGGTGTGTGG 59.186 50.000 0.00 0.00 0.00 4.17
1917 2590 2.439880 TCTATTGGTGTTGGTGTGTGGA 59.560 45.455 0.00 0.00 0.00 4.02
1918 2591 2.380064 ATTGGTGTTGGTGTGTGGAT 57.620 45.000 0.00 0.00 0.00 3.41
1919 2592 1.397672 TTGGTGTTGGTGTGTGGATG 58.602 50.000 0.00 0.00 0.00 3.51
1920 2593 1.106351 TGGTGTTGGTGTGTGGATGC 61.106 55.000 0.00 0.00 0.00 3.91
1921 2594 0.823356 GGTGTTGGTGTGTGGATGCT 60.823 55.000 0.00 0.00 0.00 3.79
1922 2595 1.544537 GGTGTTGGTGTGTGGATGCTA 60.545 52.381 0.00 0.00 0.00 3.49
1923 2596 1.806542 GTGTTGGTGTGTGGATGCTAG 59.193 52.381 0.00 0.00 0.00 3.42
1924 2597 1.271325 TGTTGGTGTGTGGATGCTAGG 60.271 52.381 0.00 0.00 0.00 3.02
1925 2598 0.327924 TTGGTGTGTGGATGCTAGGG 59.672 55.000 0.00 0.00 0.00 3.53
1926 2599 0.840288 TGGTGTGTGGATGCTAGGGT 60.840 55.000 0.00 0.00 0.00 4.34
1927 2600 0.392998 GGTGTGTGGATGCTAGGGTG 60.393 60.000 0.00 0.00 0.00 4.61
1928 2601 0.324943 GTGTGTGGATGCTAGGGTGT 59.675 55.000 0.00 0.00 0.00 4.16
2015 2715 1.335496 GATCGAGACCCAGCTACTGAC 59.665 57.143 0.00 0.00 32.44 3.51
2016 2716 0.328592 TCGAGACCCAGCTACTGACT 59.671 55.000 0.00 0.00 32.44 3.41
2017 2717 0.453793 CGAGACCCAGCTACTGACTG 59.546 60.000 0.00 0.00 32.44 3.51
2018 2718 1.840737 GAGACCCAGCTACTGACTGA 58.159 55.000 0.00 0.00 37.32 3.41
2021 2721 4.148838 GAGACCCAGCTACTGACTGATAT 58.851 47.826 0.00 0.00 37.32 1.63
2023 2723 4.343526 AGACCCAGCTACTGACTGATATTG 59.656 45.833 0.00 0.00 37.32 1.90
2024 2724 3.181461 ACCCAGCTACTGACTGATATTGC 60.181 47.826 0.00 0.00 37.32 3.56
2025 2725 3.055591 CCAGCTACTGACTGATATTGCG 58.944 50.000 0.00 0.00 37.32 4.85
2026 2726 2.474359 CAGCTACTGACTGATATTGCGC 59.526 50.000 0.00 0.00 37.32 6.09
2027 2727 2.101415 AGCTACTGACTGATATTGCGCA 59.899 45.455 5.66 5.66 0.00 6.09
2028 2728 2.866156 GCTACTGACTGATATTGCGCAA 59.134 45.455 27.24 27.24 0.00 4.85
2043 2747 1.269831 GCGCAACTAGGGACAGATAGG 60.270 57.143 0.30 0.00 0.00 2.57
2048 2752 4.227197 CAACTAGGGACAGATAGGTGGAT 58.773 47.826 0.00 0.00 33.84 3.41
2052 2756 2.022035 AGGGACAGATAGGTGGATTGGA 60.022 50.000 0.00 0.00 0.00 3.53
2087 2795 3.620488 TGACTTCAGTGCTCCACTTTTT 58.380 40.909 0.00 0.00 42.59 1.94
2109 2817 1.400142 TCTGTGTGTTTTGCTCGGTTG 59.600 47.619 0.00 0.00 0.00 3.77
2121 2829 4.740822 CGGTTGGCCCCCTTGGAG 62.741 72.222 0.00 0.00 35.39 3.86
2123 2831 4.299796 GTTGGCCCCCTTGGAGCA 62.300 66.667 0.00 0.00 35.39 4.26
2124 2832 3.275271 TTGGCCCCCTTGGAGCAT 61.275 61.111 0.00 0.00 35.39 3.79
2125 2833 3.301222 TTGGCCCCCTTGGAGCATC 62.301 63.158 0.00 0.00 35.39 3.91
2126 2834 3.743017 GGCCCCCTTGGAGCATCA 61.743 66.667 0.00 0.00 36.25 3.07
2127 2835 2.605299 GCCCCCTTGGAGCATCAT 59.395 61.111 0.00 0.00 36.25 2.45
2128 2836 1.530183 GCCCCCTTGGAGCATCATC 60.530 63.158 0.00 0.00 36.25 2.92
2131 2839 1.358830 CCCCTTGGAGCATCATCCCT 61.359 60.000 0.00 0.00 38.72 4.20
2166 2874 1.670811 CGAGGTAAATGCACCATGGTC 59.329 52.381 16.53 10.81 41.40 4.02
2193 2901 2.588034 GCCACGGCCGATTACCTC 60.588 66.667 35.90 9.29 34.56 3.85
2238 2950 5.601583 TCACTTTGGTGTCTGTAGTTGTA 57.398 39.130 0.00 0.00 43.41 2.41
2262 2974 9.341899 GTAGCATACAGAAAAATGGTAAAACTG 57.658 33.333 0.00 0.00 42.43 3.16
2263 2975 7.378181 AGCATACAGAAAAATGGTAAAACTGG 58.622 34.615 0.00 0.00 32.33 4.00
2264 2976 6.090763 GCATACAGAAAAATGGTAAAACTGGC 59.909 38.462 0.00 0.00 0.00 4.85
2265 2977 5.606348 ACAGAAAAATGGTAAAACTGGCA 57.394 34.783 0.00 0.00 0.00 4.92
2266 2978 5.600696 ACAGAAAAATGGTAAAACTGGCAG 58.399 37.500 14.16 14.16 0.00 4.85
2267 2979 5.362430 ACAGAAAAATGGTAAAACTGGCAGA 59.638 36.000 23.66 0.00 0.00 4.26
2268 2980 5.691754 CAGAAAAATGGTAAAACTGGCAGAC 59.308 40.000 23.66 8.62 0.00 3.51
2269 2981 4.600692 AAAATGGTAAAACTGGCAGACC 57.399 40.909 23.66 18.30 0.00 3.85
2270 2982 3.525800 AATGGTAAAACTGGCAGACCT 57.474 42.857 23.66 6.86 36.63 3.85
2271 2983 2.270352 TGGTAAAACTGGCAGACCTG 57.730 50.000 23.66 0.00 40.61 4.00
2272 2984 1.771854 TGGTAAAACTGGCAGACCTGA 59.228 47.619 23.66 0.08 38.25 3.86
2273 2985 2.224523 TGGTAAAACTGGCAGACCTGAG 60.225 50.000 23.66 0.00 38.25 3.35
2274 2986 2.427506 GTAAAACTGGCAGACCTGAGG 58.572 52.381 23.66 0.00 38.25 3.86
2275 2987 0.111253 AAAACTGGCAGACCTGAGGG 59.889 55.000 23.66 0.00 38.25 4.30
2276 2988 1.783250 AAACTGGCAGACCTGAGGGG 61.783 60.000 23.66 0.00 38.25 4.79
2277 2989 3.406200 CTGGCAGACCTGAGGGGG 61.406 72.222 9.42 0.00 40.03 5.40
2278 2990 4.270153 TGGCAGACCTGAGGGGGT 62.270 66.667 2.38 0.00 43.07 4.95
2286 2998 2.361085 ACCTGAGGGGGTCAAATACT 57.639 50.000 2.38 0.00 40.03 2.12
2287 2999 3.502051 ACCTGAGGGGGTCAAATACTA 57.498 47.619 2.38 0.00 40.03 1.82
2288 3000 3.810623 ACCTGAGGGGGTCAAATACTAA 58.189 45.455 2.38 0.00 40.03 2.24
2289 3001 4.180723 ACCTGAGGGGGTCAAATACTAAA 58.819 43.478 2.38 0.00 40.03 1.85
2290 3002 4.794067 ACCTGAGGGGGTCAAATACTAAAT 59.206 41.667 2.38 0.00 40.03 1.40
2291 3003 5.255443 ACCTGAGGGGGTCAAATACTAAATT 59.745 40.000 2.38 0.00 40.03 1.82
2292 3004 6.194967 CCTGAGGGGGTCAAATACTAAATTT 58.805 40.000 0.00 0.00 33.60 1.82
2293 3005 7.036425 ACCTGAGGGGGTCAAATACTAAATTTA 60.036 37.037 2.38 0.00 40.03 1.40
2294 3006 8.004801 CCTGAGGGGGTCAAATACTAAATTTAT 58.995 37.037 0.00 0.00 33.60 1.40
2296 3008 9.856162 TGAGGGGGTCAAATACTAAATTTATAC 57.144 33.333 0.00 0.00 29.64 1.47
2299 3011 9.856162 GGGGGTCAAATACTAAATTTATACTCA 57.144 33.333 0.00 0.00 0.00 3.41
2340 3052 8.871686 AAAATTCCTACACACTTTTTGCTTAG 57.128 30.769 0.00 0.00 0.00 2.18
2341 3053 6.575162 ATTCCTACACACTTTTTGCTTAGG 57.425 37.500 0.00 0.00 0.00 2.69
2342 3054 3.818773 TCCTACACACTTTTTGCTTAGGC 59.181 43.478 0.00 0.00 39.26 3.93
2343 3055 3.821033 CCTACACACTTTTTGCTTAGGCT 59.179 43.478 0.00 0.00 39.59 4.58
2344 3056 3.715628 ACACACTTTTTGCTTAGGCTG 57.284 42.857 0.00 0.00 39.59 4.85
2345 3057 2.362077 ACACACTTTTTGCTTAGGCTGG 59.638 45.455 0.00 0.00 39.59 4.85
2346 3058 1.963515 ACACTTTTTGCTTAGGCTGGG 59.036 47.619 0.00 0.00 39.59 4.45
2347 3059 1.273327 CACTTTTTGCTTAGGCTGGGG 59.727 52.381 0.00 0.00 39.59 4.96
2348 3060 0.897621 CTTTTTGCTTAGGCTGGGGG 59.102 55.000 0.00 0.00 39.59 5.40
2362 3074 4.678743 GGGGGCCACAACACCTCC 62.679 72.222 7.65 0.00 40.13 4.30
2363 3075 3.897122 GGGGCCACAACACCTCCA 61.897 66.667 4.39 0.00 0.00 3.86
2364 3076 2.282462 GGGCCACAACACCTCCAG 60.282 66.667 4.39 0.00 0.00 3.86
2365 3077 2.282462 GGCCACAACACCTCCAGG 60.282 66.667 0.00 0.00 42.17 4.45
2366 3078 2.829384 GGCCACAACACCTCCAGGA 61.829 63.158 0.00 0.00 38.94 3.86
2367 3079 1.302832 GCCACAACACCTCCAGGAG 60.303 63.158 9.90 9.90 38.94 3.69
2368 3080 1.302832 CCACAACACCTCCAGGAGC 60.303 63.158 11.57 0.00 38.94 4.70
2369 3081 1.451504 CACAACACCTCCAGGAGCA 59.548 57.895 11.57 0.00 38.94 4.26
2370 3082 0.886490 CACAACACCTCCAGGAGCAC 60.886 60.000 11.57 0.00 38.94 4.40
2371 3083 1.344953 ACAACACCTCCAGGAGCACA 61.345 55.000 11.57 0.00 38.94 4.57
2372 3084 0.886490 CAACACCTCCAGGAGCACAC 60.886 60.000 11.57 0.00 38.94 3.82
2373 3085 1.344953 AACACCTCCAGGAGCACACA 61.345 55.000 11.57 0.00 38.94 3.72
2374 3086 1.130054 ACACCTCCAGGAGCACACAT 61.130 55.000 11.57 0.00 38.94 3.21
2375 3087 0.904649 CACCTCCAGGAGCACACATA 59.095 55.000 11.57 0.00 38.94 2.29
2376 3088 1.134580 CACCTCCAGGAGCACACATAG 60.135 57.143 11.57 0.00 38.94 2.23
2377 3089 0.179062 CCTCCAGGAGCACACATAGC 60.179 60.000 11.57 0.00 37.39 2.97
2378 3090 0.829333 CTCCAGGAGCACACATAGCT 59.171 55.000 2.60 0.00 46.82 3.32
2383 3095 2.187946 AGCACACATAGCTCCGCC 59.812 61.111 0.00 0.00 38.01 6.13
2384 3096 2.125147 GCACACATAGCTCCGCCA 60.125 61.111 0.00 0.00 0.00 5.69
2385 3097 2.464459 GCACACATAGCTCCGCCAC 61.464 63.158 0.00 0.00 0.00 5.01
2386 3098 1.219124 CACACATAGCTCCGCCACT 59.781 57.895 0.00 0.00 0.00 4.00
2387 3099 1.086067 CACACATAGCTCCGCCACTG 61.086 60.000 0.00 0.00 0.00 3.66
2388 3100 2.176273 CACATAGCTCCGCCACTGC 61.176 63.158 0.00 0.00 0.00 4.40
2389 3101 2.590007 CATAGCTCCGCCACTGCC 60.590 66.667 0.00 0.00 0.00 4.85
2390 3102 2.765807 ATAGCTCCGCCACTGCCT 60.766 61.111 0.00 0.00 0.00 4.75
2391 3103 3.099211 ATAGCTCCGCCACTGCCTG 62.099 63.158 0.00 0.00 0.00 4.85
2407 3119 1.466856 CCTGCAGGCAATACATGTGT 58.533 50.000 22.33 0.00 0.00 3.72
2408 3120 1.820519 CCTGCAGGCAATACATGTGTT 59.179 47.619 22.33 5.07 0.00 3.32
2409 3121 2.159338 CCTGCAGGCAATACATGTGTTC 60.159 50.000 22.33 2.70 0.00 3.18
2410 3122 1.468127 TGCAGGCAATACATGTGTTCG 59.532 47.619 9.11 4.67 0.00 3.95
2411 3123 1.737236 GCAGGCAATACATGTGTTCGA 59.263 47.619 9.11 0.00 0.00 3.71
2412 3124 2.355756 GCAGGCAATACATGTGTTCGAT 59.644 45.455 9.11 0.00 0.00 3.59
2413 3125 3.546815 GCAGGCAATACATGTGTTCGATC 60.547 47.826 9.11 0.00 0.00 3.69
2414 3126 3.002656 CAGGCAATACATGTGTTCGATCC 59.997 47.826 9.11 6.49 0.00 3.36
2415 3127 2.032894 GGCAATACATGTGTTCGATCCG 60.033 50.000 9.11 0.00 0.00 4.18
2416 3128 2.863740 GCAATACATGTGTTCGATCCGA 59.136 45.455 9.11 0.00 0.00 4.55
2417 3129 3.302480 GCAATACATGTGTTCGATCCGAC 60.302 47.826 9.11 0.00 34.89 4.79
2418 3130 3.793797 ATACATGTGTTCGATCCGACA 57.206 42.857 9.11 0.00 34.89 4.35
2419 3131 2.448926 ACATGTGTTCGATCCGACAA 57.551 45.000 0.00 0.00 34.89 3.18
2420 3132 2.761559 ACATGTGTTCGATCCGACAAA 58.238 42.857 0.00 0.00 34.89 2.83
2421 3133 2.478894 ACATGTGTTCGATCCGACAAAC 59.521 45.455 0.00 0.00 34.89 2.93
2422 3134 1.133407 TGTGTTCGATCCGACAAACG 58.867 50.000 0.00 0.00 34.89 3.60
2423 3135 0.179258 GTGTTCGATCCGACAAACGC 60.179 55.000 0.00 0.00 41.07 4.84
2424 3136 1.056750 GTTCGATCCGACAAACGCG 59.943 57.895 3.53 3.53 41.07 6.01
2427 3139 2.433664 GATCCGACAAACGCGGGT 60.434 61.111 12.47 5.38 46.62 5.28
2428 3140 2.030958 GATCCGACAAACGCGGGTT 61.031 57.895 12.67 12.67 43.42 4.11
2429 3141 0.737019 GATCCGACAAACGCGGGTTA 60.737 55.000 18.92 1.73 43.42 2.85
2430 3142 2.070539 GATCCGACAAACGCGGGTTAT 61.071 52.381 18.92 9.94 43.42 1.89
2431 3143 1.711500 CCGACAAACGCGGGTTATC 59.289 57.895 18.92 16.90 44.87 1.75
2432 3144 1.698714 CCGACAAACGCGGGTTATCC 61.699 60.000 18.92 9.12 44.87 2.59
2446 3158 2.943033 GGTTATCCCACTCCAATGAACG 59.057 50.000 0.00 0.00 0.00 3.95
2447 3159 3.370103 GGTTATCCCACTCCAATGAACGA 60.370 47.826 0.00 0.00 0.00 3.85
2448 3160 4.451900 GTTATCCCACTCCAATGAACGAT 58.548 43.478 0.00 0.00 0.00 3.73
2449 3161 2.401583 TCCCACTCCAATGAACGATG 57.598 50.000 0.00 0.00 0.00 3.84
2450 3162 1.628340 TCCCACTCCAATGAACGATGT 59.372 47.619 0.00 0.00 0.00 3.06
2451 3163 2.039746 TCCCACTCCAATGAACGATGTT 59.960 45.455 0.00 0.00 0.00 2.71
2452 3164 2.819608 CCCACTCCAATGAACGATGTTT 59.180 45.455 0.00 0.00 0.00 2.83
2453 3165 3.119849 CCCACTCCAATGAACGATGTTTC 60.120 47.826 0.00 0.00 0.00 2.78
2454 3166 3.501828 CCACTCCAATGAACGATGTTTCA 59.498 43.478 0.00 0.00 39.79 2.69
2455 3167 4.156556 CCACTCCAATGAACGATGTTTCAT 59.843 41.667 0.00 0.00 46.18 2.57
2456 3168 5.090757 CACTCCAATGAACGATGTTTCATG 58.909 41.667 0.28 0.00 43.95 3.07
2457 3169 5.003160 ACTCCAATGAACGATGTTTCATGA 58.997 37.500 0.00 0.00 43.95 3.07
2458 3170 5.106555 ACTCCAATGAACGATGTTTCATGAC 60.107 40.000 0.00 0.00 43.95 3.06
2459 3171 5.003160 TCCAATGAACGATGTTTCATGACT 58.997 37.500 0.00 0.00 43.95 3.41
2460 3172 5.090757 CCAATGAACGATGTTTCATGACTG 58.909 41.667 0.00 0.00 43.95 3.51
2461 3173 5.335113 CCAATGAACGATGTTTCATGACTGT 60.335 40.000 0.00 0.00 43.95 3.55
2462 3174 5.947228 ATGAACGATGTTTCATGACTGTT 57.053 34.783 0.00 0.00 43.25 3.16
2463 3175 5.342806 TGAACGATGTTTCATGACTGTTC 57.657 39.130 0.00 4.66 36.06 3.18
2464 3176 4.213270 TGAACGATGTTTCATGACTGTTCC 59.787 41.667 0.00 0.00 34.96 3.62
2465 3177 2.736721 ACGATGTTTCATGACTGTTCCG 59.263 45.455 0.00 0.00 0.00 4.30
2466 3178 2.094258 CGATGTTTCATGACTGTTCCGG 59.906 50.000 0.00 0.00 0.00 5.14
2467 3179 1.234821 TGTTTCATGACTGTTCCGGC 58.765 50.000 0.00 0.00 0.00 6.13
2468 3180 1.202758 TGTTTCATGACTGTTCCGGCT 60.203 47.619 0.00 0.00 0.00 5.52
2469 3181 2.037902 TGTTTCATGACTGTTCCGGCTA 59.962 45.455 0.00 0.00 0.00 3.93
2470 3182 3.270877 GTTTCATGACTGTTCCGGCTAT 58.729 45.455 0.00 0.00 0.00 2.97
2471 3183 2.602257 TCATGACTGTTCCGGCTATG 57.398 50.000 0.00 0.00 0.00 2.23
2472 3184 1.831106 TCATGACTGTTCCGGCTATGT 59.169 47.619 0.00 0.00 0.00 2.29
2473 3185 2.159099 TCATGACTGTTCCGGCTATGTC 60.159 50.000 0.00 3.49 0.00 3.06
2474 3186 0.535335 TGACTGTTCCGGCTATGTCC 59.465 55.000 0.00 0.00 0.00 4.02
2480 3192 1.135024 GTTCCGGCTATGTCCGTAACA 60.135 52.381 0.00 0.00 44.51 2.41
2481 3193 2.674747 GTTCCGGCTATGTCCGTAACAA 60.675 50.000 0.00 0.00 44.51 2.83
2482 3194 4.168779 GTTCCGGCTATGTCCGTAACAAA 61.169 47.826 0.00 0.00 44.51 2.83
2483 3195 5.622686 GTTCCGGCTATGTCCGTAACAAAA 61.623 45.833 0.00 0.00 44.51 2.44
2484 3196 6.875699 GTTCCGGCTATGTCCGTAACAAAAT 61.876 44.000 0.00 0.00 44.51 1.82
2485 3197 7.613267 GTTCCGGCTATGTCCGTAACAAAATA 61.613 42.308 0.00 0.00 44.51 1.40
2486 3198 5.917541 CGGCTATGTCCGTAACAAAATAT 57.082 39.130 0.00 0.00 44.18 1.28
2488 3200 7.591006 CGGCTATGTCCGTAACAAAATATAT 57.409 36.000 0.00 0.00 44.18 0.86
2489 3201 8.025243 CGGCTATGTCCGTAACAAAATATATT 57.975 34.615 0.00 0.00 44.18 1.28
2490 3202 9.142515 CGGCTATGTCCGTAACAAAATATATTA 57.857 33.333 0.00 0.00 44.18 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 5.698545 TGATAAATGGTTTTTGGCCTTTTCG 59.301 36.000 3.32 0.00 35.72 3.46
66 67 7.228507 ACTTGATAAATGGTTTTTGGCCTTTTC 59.771 33.333 3.32 0.00 35.72 2.29
84 86 9.742144 TTTATAAGGGTTTGTGCTACTTGATAA 57.258 29.630 0.00 0.00 0.00 1.75
88 90 8.138712 TGTTTTTATAAGGGTTTGTGCTACTTG 58.861 33.333 0.00 0.00 0.00 3.16
133 135 6.652053 CACCCCCAATCATTTGAATGTATTT 58.348 36.000 3.85 0.00 37.65 1.40
147 149 1.749258 GACTTCGGCACCCCCAATC 60.749 63.158 0.00 0.00 0.00 2.67
148 150 1.789576 AAGACTTCGGCACCCCCAAT 61.790 55.000 0.00 0.00 0.00 3.16
149 151 2.406002 GAAGACTTCGGCACCCCCAA 62.406 60.000 0.00 0.00 0.00 4.12
161 163 3.328931 TGAATGCAGGAGGAAGAAGACTT 59.671 43.478 0.00 0.00 39.24 3.01
162 164 2.909006 TGAATGCAGGAGGAAGAAGACT 59.091 45.455 0.00 0.00 0.00 3.24
163 165 3.340814 TGAATGCAGGAGGAAGAAGAC 57.659 47.619 0.00 0.00 0.00 3.01
164 166 4.202503 ACTTTGAATGCAGGAGGAAGAAGA 60.203 41.667 0.00 0.00 0.00 2.87
165 167 4.077822 ACTTTGAATGCAGGAGGAAGAAG 58.922 43.478 0.00 0.00 0.00 2.85
166 168 4.074970 GACTTTGAATGCAGGAGGAAGAA 58.925 43.478 0.00 0.00 0.00 2.52
167 169 3.328931 AGACTTTGAATGCAGGAGGAAGA 59.671 43.478 0.00 0.00 0.00 2.87
168 170 3.683802 AGACTTTGAATGCAGGAGGAAG 58.316 45.455 0.00 0.00 0.00 3.46
169 171 3.795688 AGACTTTGAATGCAGGAGGAA 57.204 42.857 0.00 0.00 0.00 3.36
170 172 3.328931 AGAAGACTTTGAATGCAGGAGGA 59.671 43.478 0.00 0.00 0.00 3.71
171 173 3.683802 AGAAGACTTTGAATGCAGGAGG 58.316 45.455 0.00 0.00 0.00 4.30
172 174 6.808008 TTTAGAAGACTTTGAATGCAGGAG 57.192 37.500 0.00 0.00 0.00 3.69
195 197 9.921637 TGAGAAACACTTGTAAGAAACATTTTT 57.078 25.926 0.00 0.00 38.10 1.94
196 198 9.921637 TTGAGAAACACTTGTAAGAAACATTTT 57.078 25.926 0.00 0.00 38.10 1.82
198 200 9.353999 GTTTGAGAAACACTTGTAAGAAACATT 57.646 29.630 0.00 0.00 41.04 2.71
199 201 8.519526 TGTTTGAGAAACACTTGTAAGAAACAT 58.480 29.630 0.00 0.00 45.79 2.71
200 202 7.877003 TGTTTGAGAAACACTTGTAAGAAACA 58.123 30.769 0.00 0.00 45.79 2.83
228 858 9.197306 ACAATCTGTGTCCTAACATATACAGTA 57.803 33.333 0.00 0.00 34.38 2.74
229 859 8.079211 ACAATCTGTGTCCTAACATATACAGT 57.921 34.615 0.00 0.00 34.38 3.55
231 861 9.811995 GTTACAATCTGTGTCCTAACATATACA 57.188 33.333 0.00 0.00 41.98 2.29
232 862 8.965172 CGTTACAATCTGTGTCCTAACATATAC 58.035 37.037 0.00 0.00 41.98 1.47
239 869 5.242171 TCTCACGTTACAATCTGTGTCCTAA 59.758 40.000 0.00 0.00 41.98 2.69
253 883 3.512680 CCCTCAAGTCATCTCACGTTAC 58.487 50.000 0.00 0.00 0.00 2.50
258 888 1.065854 CACCCCCTCAAGTCATCTCAC 60.066 57.143 0.00 0.00 0.00 3.51
261 891 2.642171 TACACCCCCTCAAGTCATCT 57.358 50.000 0.00 0.00 0.00 2.90
264 894 2.554344 GCATTTACACCCCCTCAAGTCA 60.554 50.000 0.00 0.00 0.00 3.41
265 895 2.092323 GCATTTACACCCCCTCAAGTC 58.908 52.381 0.00 0.00 0.00 3.01
273 903 3.342719 CCCATTTTTGCATTTACACCCC 58.657 45.455 0.00 0.00 0.00 4.95
284 914 2.477845 AACCATGAGCCCATTTTTGC 57.522 45.000 0.00 0.00 0.00 3.68
466 1123 7.719633 AGCTTTCATCTACAACTTCAAGGTTTA 59.280 33.333 0.00 0.00 0.00 2.01
470 1127 7.672983 TTAGCTTTCATCTACAACTTCAAGG 57.327 36.000 0.00 0.00 0.00 3.61
471 1128 9.766277 GATTTAGCTTTCATCTACAACTTCAAG 57.234 33.333 0.00 0.00 0.00 3.02
472 1129 9.283768 TGATTTAGCTTTCATCTACAACTTCAA 57.716 29.630 0.00 0.00 0.00 2.69
473 1130 8.846943 TGATTTAGCTTTCATCTACAACTTCA 57.153 30.769 0.00 0.00 0.00 3.02
475 1132 9.899226 GTTTGATTTAGCTTTCATCTACAACTT 57.101 29.630 0.00 0.00 0.00 2.66
476 1133 8.515414 GGTTTGATTTAGCTTTCATCTACAACT 58.485 33.333 0.00 0.00 0.00 3.16
477 1134 7.755373 GGGTTTGATTTAGCTTTCATCTACAAC 59.245 37.037 0.00 0.00 0.00 3.32
478 1135 7.669722 AGGGTTTGATTTAGCTTTCATCTACAA 59.330 33.333 0.00 0.00 0.00 2.41
479 1136 7.121168 CAGGGTTTGATTTAGCTTTCATCTACA 59.879 37.037 0.00 0.00 0.00 2.74
480 1137 7.336931 TCAGGGTTTGATTTAGCTTTCATCTAC 59.663 37.037 0.00 0.00 0.00 2.59
481 1138 7.402054 TCAGGGTTTGATTTAGCTTTCATCTA 58.598 34.615 0.00 0.00 0.00 1.98
482 1139 6.248433 TCAGGGTTTGATTTAGCTTTCATCT 58.752 36.000 0.00 0.00 0.00 2.90
483 1140 6.515272 TCAGGGTTTGATTTAGCTTTCATC 57.485 37.500 0.00 0.00 0.00 2.92
484 1141 6.494835 AGTTCAGGGTTTGATTTAGCTTTCAT 59.505 34.615 0.00 0.00 35.27 2.57
485 1142 5.833131 AGTTCAGGGTTTGATTTAGCTTTCA 59.167 36.000 0.00 0.00 35.27 2.69
486 1143 6.332735 AGTTCAGGGTTTGATTTAGCTTTC 57.667 37.500 0.00 0.00 35.27 2.62
487 1144 6.731292 AAGTTCAGGGTTTGATTTAGCTTT 57.269 33.333 0.00 0.00 35.27 3.51
488 1145 6.323739 TCAAAGTTCAGGGTTTGATTTAGCTT 59.676 34.615 0.00 0.00 37.67 3.74
489 1146 5.833131 TCAAAGTTCAGGGTTTGATTTAGCT 59.167 36.000 0.00 0.00 37.67 3.32
490 1147 6.084326 TCAAAGTTCAGGGTTTGATTTAGC 57.916 37.500 0.00 0.00 37.67 3.09
491 1148 7.814587 GGATTCAAAGTTCAGGGTTTGATTTAG 59.185 37.037 0.00 0.00 41.20 1.85
492 1149 7.256154 GGGATTCAAAGTTCAGGGTTTGATTTA 60.256 37.037 0.00 0.00 41.20 1.40
493 1150 6.464322 GGGATTCAAAGTTCAGGGTTTGATTT 60.464 38.462 0.00 0.00 41.20 2.17
494 1151 5.012046 GGGATTCAAAGTTCAGGGTTTGATT 59.988 40.000 0.00 0.00 41.20 2.57
495 1152 4.528206 GGGATTCAAAGTTCAGGGTTTGAT 59.472 41.667 0.00 0.00 41.20 2.57
496 1153 3.895041 GGGATTCAAAGTTCAGGGTTTGA 59.105 43.478 0.00 0.00 40.16 2.69
497 1154 3.897505 AGGGATTCAAAGTTCAGGGTTTG 59.102 43.478 0.00 0.00 35.38 2.93
498 1155 4.199002 AGGGATTCAAAGTTCAGGGTTT 57.801 40.909 0.00 0.00 0.00 3.27
499 1156 3.903530 AGGGATTCAAAGTTCAGGGTT 57.096 42.857 0.00 0.00 0.00 4.11
500 1157 5.333566 TTTAGGGATTCAAAGTTCAGGGT 57.666 39.130 0.00 0.00 0.00 4.34
501 1158 6.857437 ATTTTAGGGATTCAAAGTTCAGGG 57.143 37.500 0.00 0.00 0.00 4.45
502 1159 7.814587 GTCAATTTTAGGGATTCAAAGTTCAGG 59.185 37.037 0.00 0.00 0.00 3.86
503 1160 8.359642 TGTCAATTTTAGGGATTCAAAGTTCAG 58.640 33.333 0.00 0.00 0.00 3.02
504 1161 8.141268 GTGTCAATTTTAGGGATTCAAAGTTCA 58.859 33.333 0.00 0.00 0.00 3.18
505 1162 8.360390 AGTGTCAATTTTAGGGATTCAAAGTTC 58.640 33.333 0.00 0.00 0.00 3.01
506 1163 8.250143 AGTGTCAATTTTAGGGATTCAAAGTT 57.750 30.769 0.00 0.00 0.00 2.66
507 1164 7.725844 AGAGTGTCAATTTTAGGGATTCAAAGT 59.274 33.333 0.00 0.00 0.00 2.66
508 1165 8.025445 CAGAGTGTCAATTTTAGGGATTCAAAG 58.975 37.037 0.00 0.00 0.00 2.77
509 1166 7.723616 TCAGAGTGTCAATTTTAGGGATTCAAA 59.276 33.333 0.00 0.00 0.00 2.69
510 1167 7.230747 TCAGAGTGTCAATTTTAGGGATTCAA 58.769 34.615 0.00 0.00 0.00 2.69
511 1168 6.778821 TCAGAGTGTCAATTTTAGGGATTCA 58.221 36.000 0.00 0.00 0.00 2.57
512 1169 7.391833 AGTTCAGAGTGTCAATTTTAGGGATTC 59.608 37.037 0.00 0.00 0.00 2.52
513 1170 7.234355 AGTTCAGAGTGTCAATTTTAGGGATT 58.766 34.615 0.00 0.00 0.00 3.01
514 1171 6.784031 AGTTCAGAGTGTCAATTTTAGGGAT 58.216 36.000 0.00 0.00 0.00 3.85
515 1172 6.187727 AGTTCAGAGTGTCAATTTTAGGGA 57.812 37.500 0.00 0.00 0.00 4.20
516 1173 6.263168 ACAAGTTCAGAGTGTCAATTTTAGGG 59.737 38.462 0.00 0.00 0.00 3.53
517 1174 7.264373 ACAAGTTCAGAGTGTCAATTTTAGG 57.736 36.000 0.00 0.00 0.00 2.69
520 1177 8.352942 GGATTACAAGTTCAGAGTGTCAATTTT 58.647 33.333 0.00 0.00 0.00 1.82
521 1178 7.721399 AGGATTACAAGTTCAGAGTGTCAATTT 59.279 33.333 0.00 0.00 0.00 1.82
522 1179 7.173907 CAGGATTACAAGTTCAGAGTGTCAATT 59.826 37.037 0.00 0.00 0.00 2.32
523 1180 6.652481 CAGGATTACAAGTTCAGAGTGTCAAT 59.348 38.462 0.00 0.00 0.00 2.57
524 1181 5.991606 CAGGATTACAAGTTCAGAGTGTCAA 59.008 40.000 0.00 0.00 0.00 3.18
525 1182 5.511373 CCAGGATTACAAGTTCAGAGTGTCA 60.511 44.000 0.00 0.00 0.00 3.58
526 1183 4.932200 CCAGGATTACAAGTTCAGAGTGTC 59.068 45.833 0.00 0.00 0.00 3.67
527 1184 4.348168 ACCAGGATTACAAGTTCAGAGTGT 59.652 41.667 0.00 0.00 0.00 3.55
528 1185 4.899502 ACCAGGATTACAAGTTCAGAGTG 58.100 43.478 0.00 0.00 0.00 3.51
529 1186 4.841246 AGACCAGGATTACAAGTTCAGAGT 59.159 41.667 0.00 0.00 0.00 3.24
530 1187 5.413309 AGACCAGGATTACAAGTTCAGAG 57.587 43.478 0.00 0.00 0.00 3.35
531 1188 7.496346 AATAGACCAGGATTACAAGTTCAGA 57.504 36.000 0.00 0.00 0.00 3.27
532 1189 8.454106 CAAAATAGACCAGGATTACAAGTTCAG 58.546 37.037 0.00 0.00 0.00 3.02
533 1190 8.160765 TCAAAATAGACCAGGATTACAAGTTCA 58.839 33.333 0.00 0.00 0.00 3.18
534 1191 8.561738 TCAAAATAGACCAGGATTACAAGTTC 57.438 34.615 0.00 0.00 0.00 3.01
535 1192 8.793592 GTTCAAAATAGACCAGGATTACAAGTT 58.206 33.333 0.00 0.00 0.00 2.66
536 1193 7.393515 GGTTCAAAATAGACCAGGATTACAAGT 59.606 37.037 0.00 0.00 0.00 3.16
537 1194 7.148069 GGGTTCAAAATAGACCAGGATTACAAG 60.148 40.741 0.00 0.00 0.00 3.16
538 1195 6.661805 GGGTTCAAAATAGACCAGGATTACAA 59.338 38.462 0.00 0.00 0.00 2.41
539 1196 6.011981 AGGGTTCAAAATAGACCAGGATTACA 60.012 38.462 0.00 0.00 0.00 2.41
540 1197 6.424032 AGGGTTCAAAATAGACCAGGATTAC 58.576 40.000 0.00 0.00 0.00 1.89
541 1198 6.652205 AGGGTTCAAAATAGACCAGGATTA 57.348 37.500 0.00 0.00 0.00 1.75
542 1199 5.536497 AGGGTTCAAAATAGACCAGGATT 57.464 39.130 0.00 0.00 0.00 3.01
543 1200 5.970640 TCTAGGGTTCAAAATAGACCAGGAT 59.029 40.000 0.00 0.00 0.00 3.24
544 1201 5.189145 GTCTAGGGTTCAAAATAGACCAGGA 59.811 44.000 0.00 0.00 38.68 3.86
545 1202 5.429130 GTCTAGGGTTCAAAATAGACCAGG 58.571 45.833 0.00 0.00 38.68 4.45
549 1206 6.051179 ACAGGTCTAGGGTTCAAAATAGAC 57.949 41.667 3.22 3.22 42.13 2.59
550 1207 6.697641 AACAGGTCTAGGGTTCAAAATAGA 57.302 37.500 0.00 0.00 0.00 1.98
551 1208 6.151144 CCAAACAGGTCTAGGGTTCAAAATAG 59.849 42.308 0.00 0.00 0.00 1.73
552 1209 6.007703 CCAAACAGGTCTAGGGTTCAAAATA 58.992 40.000 0.00 0.00 0.00 1.40
553 1210 4.832823 CCAAACAGGTCTAGGGTTCAAAAT 59.167 41.667 0.00 0.00 0.00 1.82
554 1211 4.211920 CCAAACAGGTCTAGGGTTCAAAA 58.788 43.478 0.00 0.00 0.00 2.44
555 1212 3.827722 CCAAACAGGTCTAGGGTTCAAA 58.172 45.455 0.00 0.00 0.00 2.69
556 1213 2.488347 GCCAAACAGGTCTAGGGTTCAA 60.488 50.000 0.00 0.00 40.61 2.69
557 1214 1.073284 GCCAAACAGGTCTAGGGTTCA 59.927 52.381 0.00 0.00 40.61 3.18
558 1215 1.822506 GCCAAACAGGTCTAGGGTTC 58.177 55.000 0.00 0.00 40.61 3.62
559 1216 0.036306 CGCCAAACAGGTCTAGGGTT 59.964 55.000 0.00 0.00 40.61 4.11
560 1217 1.677552 CGCCAAACAGGTCTAGGGT 59.322 57.895 0.00 0.00 40.61 4.34
561 1218 1.745489 GCGCCAAACAGGTCTAGGG 60.745 63.158 0.00 0.00 40.61 3.53
562 1219 1.003839 TGCGCCAAACAGGTCTAGG 60.004 57.895 4.18 0.00 40.61 3.02
563 1220 0.320771 AGTGCGCCAAACAGGTCTAG 60.321 55.000 4.18 0.00 40.61 2.43
564 1221 0.602638 CAGTGCGCCAAACAGGTCTA 60.603 55.000 4.18 0.00 40.61 2.59
565 1222 1.893808 CAGTGCGCCAAACAGGTCT 60.894 57.895 4.18 0.00 40.61 3.85
566 1223 2.639286 CAGTGCGCCAAACAGGTC 59.361 61.111 4.18 0.00 40.61 3.85
567 1224 2.906897 CCAGTGCGCCAAACAGGT 60.907 61.111 4.18 0.00 40.61 4.00
568 1225 3.673484 CCCAGTGCGCCAAACAGG 61.673 66.667 4.18 2.42 41.84 4.00
569 1226 2.133742 CTTCCCAGTGCGCCAAACAG 62.134 60.000 4.18 0.00 0.00 3.16
570 1227 2.124109 TTCCCAGTGCGCCAAACA 60.124 55.556 4.18 0.00 0.00 2.83
571 1228 1.452145 TTCTTCCCAGTGCGCCAAAC 61.452 55.000 4.18 0.00 0.00 2.93
572 1229 0.539438 ATTCTTCCCAGTGCGCCAAA 60.539 50.000 4.18 0.00 0.00 3.28
573 1230 0.326595 TATTCTTCCCAGTGCGCCAA 59.673 50.000 4.18 0.00 0.00 4.52
574 1231 0.392461 GTATTCTTCCCAGTGCGCCA 60.392 55.000 4.18 0.00 0.00 5.69
575 1232 0.392461 TGTATTCTTCCCAGTGCGCC 60.392 55.000 4.18 0.00 0.00 6.53
576 1233 1.448985 TTGTATTCTTCCCAGTGCGC 58.551 50.000 0.00 0.00 0.00 6.09
577 1234 2.614057 GGATTGTATTCTTCCCAGTGCG 59.386 50.000 0.00 0.00 0.00 5.34
583 1240 1.605753 GCCGGGATTGTATTCTTCCC 58.394 55.000 2.18 0.00 44.83 3.97
584 1241 1.605753 GGCCGGGATTGTATTCTTCC 58.394 55.000 2.18 0.00 0.00 3.46
585 1242 1.226746 CGGCCGGGATTGTATTCTTC 58.773 55.000 20.10 0.00 0.00 2.87
586 1243 0.179029 CCGGCCGGGATTGTATTCTT 60.179 55.000 37.42 0.00 38.47 2.52
587 1244 1.450211 CCGGCCGGGATTGTATTCT 59.550 57.895 37.42 0.00 38.47 2.40
588 1245 4.058797 CCGGCCGGGATTGTATTC 57.941 61.111 37.42 0.00 38.47 1.75
602 1259 0.676736 GAGAGTAGCTGGAATCCCGG 59.323 60.000 0.00 0.00 41.93 5.73
603 1260 0.312416 CGAGAGTAGCTGGAATCCCG 59.688 60.000 0.00 0.00 34.29 5.14
604 1261 0.032815 GCGAGAGTAGCTGGAATCCC 59.967 60.000 0.00 0.00 0.00 3.85
605 1262 0.318275 CGCGAGAGTAGCTGGAATCC 60.318 60.000 0.00 0.00 0.00 3.01
606 1263 0.318275 CCGCGAGAGTAGCTGGAATC 60.318 60.000 8.23 0.00 32.73 2.52
607 1264 0.752009 TCCGCGAGAGTAGCTGGAAT 60.752 55.000 8.23 0.00 35.55 3.01
608 1265 1.378119 TCCGCGAGAGTAGCTGGAA 60.378 57.895 8.23 0.00 35.55 3.53
609 1266 2.113433 GTCCGCGAGAGTAGCTGGA 61.113 63.158 8.23 0.00 35.89 3.86
610 1267 1.934220 TTGTCCGCGAGAGTAGCTGG 61.934 60.000 8.23 0.00 0.00 4.85
611 1268 0.524392 CTTGTCCGCGAGAGTAGCTG 60.524 60.000 8.23 0.00 0.00 4.24
612 1269 0.677098 TCTTGTCCGCGAGAGTAGCT 60.677 55.000 8.23 0.00 31.72 3.32
613 1270 0.170561 TTCTTGTCCGCGAGAGTAGC 59.829 55.000 8.23 0.00 36.56 3.58
614 1271 2.853731 ATTCTTGTCCGCGAGAGTAG 57.146 50.000 8.23 3.80 36.56 2.57
615 1272 3.250744 CAAATTCTTGTCCGCGAGAGTA 58.749 45.455 8.23 0.00 36.56 2.59
616 1273 2.069273 CAAATTCTTGTCCGCGAGAGT 58.931 47.619 8.23 0.00 36.56 3.24
617 1274 1.394917 CCAAATTCTTGTCCGCGAGAG 59.605 52.381 8.23 0.00 36.56 3.20
618 1275 1.438651 CCAAATTCTTGTCCGCGAGA 58.561 50.000 8.23 0.00 33.47 4.04
619 1276 0.447801 CCCAAATTCTTGTCCGCGAG 59.552 55.000 8.23 0.00 0.00 5.03
620 1277 1.582610 GCCCAAATTCTTGTCCGCGA 61.583 55.000 8.23 0.00 0.00 5.87
621 1278 1.154035 GCCCAAATTCTTGTCCGCG 60.154 57.895 0.00 0.00 0.00 6.46
622 1279 1.215382 GGCCCAAATTCTTGTCCGC 59.785 57.895 0.00 0.00 0.00 5.54
623 1280 1.506262 CGGCCCAAATTCTTGTCCG 59.494 57.895 0.00 0.00 39.09 4.79
624 1281 1.890174 CCGGCCCAAATTCTTGTCC 59.110 57.895 0.00 0.00 0.00 4.02
625 1282 1.215382 GCCGGCCCAAATTCTTGTC 59.785 57.895 18.11 0.00 0.00 3.18
626 1283 2.282783 GGCCGGCCCAAATTCTTGT 61.283 57.895 36.64 0.00 0.00 3.16
627 1284 2.578664 GGCCGGCCCAAATTCTTG 59.421 61.111 36.64 0.00 0.00 3.02
637 1294 3.138128 GTGTTATGTGGGCCGGCC 61.138 66.667 38.57 38.57 0.00 6.13
638 1295 1.974343 TTGTGTTATGTGGGCCGGC 60.974 57.895 21.18 21.18 0.00 6.13
639 1296 0.891449 TGTTGTGTTATGTGGGCCGG 60.891 55.000 0.00 0.00 0.00 6.13
640 1297 0.955178 TTGTTGTGTTATGTGGGCCG 59.045 50.000 0.00 0.00 0.00 6.13
641 1298 2.235016 TCTTGTTGTGTTATGTGGGCC 58.765 47.619 0.00 0.00 0.00 5.80
642 1299 4.519540 ATTCTTGTTGTGTTATGTGGGC 57.480 40.909 0.00 0.00 0.00 5.36
643 1300 5.153513 CGAATTCTTGTTGTGTTATGTGGG 58.846 41.667 3.52 0.00 0.00 4.61
644 1301 5.624900 CACGAATTCTTGTTGTGTTATGTGG 59.375 40.000 3.52 0.00 0.00 4.17
645 1302 6.426327 TCACGAATTCTTGTTGTGTTATGTG 58.574 36.000 11.31 3.90 32.55 3.21
646 1303 6.293407 CCTCACGAATTCTTGTTGTGTTATGT 60.293 38.462 11.31 0.00 32.55 2.29
647 1304 6.079763 CCTCACGAATTCTTGTTGTGTTATG 58.920 40.000 11.31 2.05 32.55 1.90
648 1305 5.763204 ACCTCACGAATTCTTGTTGTGTTAT 59.237 36.000 11.31 0.00 32.55 1.89
649 1306 5.120399 ACCTCACGAATTCTTGTTGTGTTA 58.880 37.500 11.31 0.00 32.55 2.41
650 1307 3.945285 ACCTCACGAATTCTTGTTGTGTT 59.055 39.130 11.31 0.00 32.55 3.32
651 1308 3.541632 ACCTCACGAATTCTTGTTGTGT 58.458 40.909 11.31 3.15 32.55 3.72
652 1309 4.552166 AACCTCACGAATTCTTGTTGTG 57.448 40.909 11.31 7.76 0.00 3.33
653 1310 6.687081 TTAAACCTCACGAATTCTTGTTGT 57.313 33.333 11.31 7.36 0.00 3.32
654 1311 7.979115 TTTTAAACCTCACGAATTCTTGTTG 57.021 32.000 11.31 6.82 0.00 3.33
680 1337 9.416794 TGAACAATTTTATAAATGTGCGAACAT 57.583 25.926 2.13 2.13 26.82 2.71
681 1338 8.803201 TGAACAATTTTATAAATGTGCGAACA 57.197 26.923 0.00 0.00 26.82 3.18
699 1356 9.413048 TCGACTTGTTTTTAACTTTTGAACAAT 57.587 25.926 0.00 0.00 38.89 2.71
700 1357 8.798748 TCGACTTGTTTTTAACTTTTGAACAA 57.201 26.923 0.00 0.00 37.73 2.83
701 1358 8.798748 TTCGACTTGTTTTTAACTTTTGAACA 57.201 26.923 0.00 0.00 0.00 3.18
702 1359 9.721933 CTTTCGACTTGTTTTTAACTTTTGAAC 57.278 29.630 0.00 0.00 0.00 3.18
703 1360 9.680315 TCTTTCGACTTGTTTTTAACTTTTGAA 57.320 25.926 0.00 0.00 0.00 2.69
704 1361 9.680315 TTCTTTCGACTTGTTTTTAACTTTTGA 57.320 25.926 0.00 0.00 0.00 2.69
705 1362 9.937577 CTTCTTTCGACTTGTTTTTAACTTTTG 57.062 29.630 0.00 0.00 0.00 2.44
706 1363 9.135843 CCTTCTTTCGACTTGTTTTTAACTTTT 57.864 29.630 0.00 0.00 0.00 2.27
707 1364 7.274904 GCCTTCTTTCGACTTGTTTTTAACTTT 59.725 33.333 0.00 0.00 0.00 2.66
708 1365 6.750501 GCCTTCTTTCGACTTGTTTTTAACTT 59.249 34.615 0.00 0.00 0.00 2.66
709 1366 6.263344 GCCTTCTTTCGACTTGTTTTTAACT 58.737 36.000 0.00 0.00 0.00 2.24
710 1367 5.170803 CGCCTTCTTTCGACTTGTTTTTAAC 59.829 40.000 0.00 0.00 0.00 2.01
711 1368 5.064962 TCGCCTTCTTTCGACTTGTTTTTAA 59.935 36.000 0.00 0.00 0.00 1.52
712 1369 4.571580 TCGCCTTCTTTCGACTTGTTTTTA 59.428 37.500 0.00 0.00 0.00 1.52
713 1370 3.375922 TCGCCTTCTTTCGACTTGTTTTT 59.624 39.130 0.00 0.00 0.00 1.94
714 1371 2.940410 TCGCCTTCTTTCGACTTGTTTT 59.060 40.909 0.00 0.00 0.00 2.43
715 1372 2.557317 TCGCCTTCTTTCGACTTGTTT 58.443 42.857 0.00 0.00 0.00 2.83
716 1373 2.234300 TCGCCTTCTTTCGACTTGTT 57.766 45.000 0.00 0.00 0.00 2.83
717 1374 3.980583 TCGCCTTCTTTCGACTTGT 57.019 47.368 0.00 0.00 0.00 3.16
887 1544 2.169590 GAGTGGAGGAGAGGGGTGGA 62.170 65.000 0.00 0.00 0.00 4.02
908 1565 2.286425 AGTGGGGATGAGGGGTGG 60.286 66.667 0.00 0.00 0.00 4.61
912 1569 2.972589 ATCGGGAGTGGGGATGAGGG 62.973 65.000 0.00 0.00 0.00 4.30
1132 1797 1.306141 TGAGGGCGTGGAGGAAGAT 60.306 57.895 0.00 0.00 0.00 2.40
1146 1811 2.182030 GAGAAGACGGCGGTGAGG 59.818 66.667 13.24 0.00 0.00 3.86
1761 2427 8.618677 AGTACTGAATTCACTGCATAAATCATG 58.381 33.333 3.38 0.00 37.73 3.07
1762 2428 8.743085 AGTACTGAATTCACTGCATAAATCAT 57.257 30.769 3.38 0.00 0.00 2.45
1763 2429 9.098355 GTAGTACTGAATTCACTGCATAAATCA 57.902 33.333 3.38 0.00 0.00 2.57
1764 2430 9.098355 TGTAGTACTGAATTCACTGCATAAATC 57.902 33.333 3.38 0.00 31.23 2.17
1775 2441 4.841813 TCCCAGGTTGTAGTACTGAATTCA 59.158 41.667 8.12 8.12 34.21 2.57
1776 2442 5.416271 TCCCAGGTTGTAGTACTGAATTC 57.584 43.478 5.39 0.00 34.21 2.17
1826 2499 3.261354 AGGGGGACACCTGTTTGG 58.739 61.111 0.00 0.00 40.04 3.28
1842 2515 1.294659 GACCAGACAAAGCGAGCCAG 61.295 60.000 0.00 0.00 0.00 4.85
1854 2527 1.789506 GCACTCAAGACAGACCAGAC 58.210 55.000 0.00 0.00 0.00 3.51
1860 2533 1.268079 CTCACTCGCACTCAAGACAGA 59.732 52.381 0.00 0.00 0.00 3.41
1887 2560 0.254178 ACACCAATAGAGCTGCCCAG 59.746 55.000 0.00 0.00 0.00 4.45
1888 2561 0.698238 AACACCAATAGAGCTGCCCA 59.302 50.000 0.00 0.00 0.00 5.36
1889 2562 1.098050 CAACACCAATAGAGCTGCCC 58.902 55.000 0.00 0.00 0.00 5.36
1890 2563 1.098050 CCAACACCAATAGAGCTGCC 58.902 55.000 0.00 0.00 0.00 4.85
1891 2564 1.470098 CACCAACACCAATAGAGCTGC 59.530 52.381 0.00 0.00 0.00 5.25
1892 2565 2.485426 CACACCAACACCAATAGAGCTG 59.515 50.000 0.00 0.00 0.00 4.24
1893 2566 2.106511 ACACACCAACACCAATAGAGCT 59.893 45.455 0.00 0.00 0.00 4.09
1894 2567 2.226437 CACACACCAACACCAATAGAGC 59.774 50.000 0.00 0.00 0.00 4.09
1895 2568 2.813754 CCACACACCAACACCAATAGAG 59.186 50.000 0.00 0.00 0.00 2.43
1896 2569 2.439880 TCCACACACCAACACCAATAGA 59.560 45.455 0.00 0.00 0.00 1.98
1897 2570 2.857483 TCCACACACCAACACCAATAG 58.143 47.619 0.00 0.00 0.00 1.73
1898 2571 3.153130 CATCCACACACCAACACCAATA 58.847 45.455 0.00 0.00 0.00 1.90
1899 2572 1.962807 CATCCACACACCAACACCAAT 59.037 47.619 0.00 0.00 0.00 3.16
1900 2573 1.397672 CATCCACACACCAACACCAA 58.602 50.000 0.00 0.00 0.00 3.67
1901 2574 1.106351 GCATCCACACACCAACACCA 61.106 55.000 0.00 0.00 0.00 4.17
1902 2575 0.823356 AGCATCCACACACCAACACC 60.823 55.000 0.00 0.00 0.00 4.16
1903 2576 1.806542 CTAGCATCCACACACCAACAC 59.193 52.381 0.00 0.00 0.00 3.32
1904 2577 1.271325 CCTAGCATCCACACACCAACA 60.271 52.381 0.00 0.00 0.00 3.33
1905 2578 1.453155 CCTAGCATCCACACACCAAC 58.547 55.000 0.00 0.00 0.00 3.77
1906 2579 0.327924 CCCTAGCATCCACACACCAA 59.672 55.000 0.00 0.00 0.00 3.67
1907 2580 0.840288 ACCCTAGCATCCACACACCA 60.840 55.000 0.00 0.00 0.00 4.17
1908 2581 0.392998 CACCCTAGCATCCACACACC 60.393 60.000 0.00 0.00 0.00 4.16
1909 2582 0.324943 ACACCCTAGCATCCACACAC 59.675 55.000 0.00 0.00 0.00 3.82
1910 2583 1.945580 TACACCCTAGCATCCACACA 58.054 50.000 0.00 0.00 0.00 3.72
1911 2584 2.629051 GTTACACCCTAGCATCCACAC 58.371 52.381 0.00 0.00 0.00 3.82
1912 2585 1.557832 GGTTACACCCTAGCATCCACA 59.442 52.381 0.00 0.00 30.04 4.17
1913 2586 1.838077 AGGTTACACCCTAGCATCCAC 59.162 52.381 0.00 0.00 39.75 4.02
1914 2587 1.837439 CAGGTTACACCCTAGCATCCA 59.163 52.381 0.00 0.00 39.75 3.41
1915 2588 2.116238 TCAGGTTACACCCTAGCATCC 58.884 52.381 0.00 0.00 39.75 3.51
1916 2589 4.423625 AATCAGGTTACACCCTAGCATC 57.576 45.455 0.00 0.00 39.75 3.91
1917 2590 4.348168 CCTAATCAGGTTACACCCTAGCAT 59.652 45.833 0.00 0.00 39.75 3.79
1918 2591 3.709653 CCTAATCAGGTTACACCCTAGCA 59.290 47.826 0.00 0.00 39.75 3.49
1919 2592 3.494573 GCCTAATCAGGTTACACCCTAGC 60.495 52.174 0.00 0.00 44.68 3.42
1920 2593 3.071167 GGCCTAATCAGGTTACACCCTAG 59.929 52.174 0.00 0.00 44.68 3.02
1921 2594 3.043418 GGCCTAATCAGGTTACACCCTA 58.957 50.000 0.00 0.00 44.68 3.53
1922 2595 1.844497 GGCCTAATCAGGTTACACCCT 59.156 52.381 0.00 0.00 44.68 4.34
1923 2596 1.562475 TGGCCTAATCAGGTTACACCC 59.438 52.381 3.32 0.00 44.68 4.61
1924 2597 3.577805 ATGGCCTAATCAGGTTACACC 57.422 47.619 3.32 0.00 44.68 4.16
1925 2598 4.523083 TGAATGGCCTAATCAGGTTACAC 58.477 43.478 3.32 0.00 44.68 2.90
1926 2599 4.473196 TCTGAATGGCCTAATCAGGTTACA 59.527 41.667 23.71 9.09 44.68 2.41
1927 2600 5.036117 TCTGAATGGCCTAATCAGGTTAC 57.964 43.478 23.71 0.00 44.68 2.50
1928 2601 5.708736 TTCTGAATGGCCTAATCAGGTTA 57.291 39.130 23.71 12.64 44.68 2.85
1935 2608 7.453393 TCGAAGATATTTCTGAATGGCCTAAT 58.547 34.615 3.32 0.00 30.72 1.73
1939 2612 5.618640 GCATCGAAGATATTTCTGAATGGCC 60.619 44.000 0.00 0.00 45.12 5.36
2015 2715 2.802816 GTCCCTAGTTGCGCAATATCAG 59.197 50.000 27.79 18.85 0.00 2.90
2016 2716 2.169561 TGTCCCTAGTTGCGCAATATCA 59.830 45.455 27.79 14.93 0.00 2.15
2017 2717 2.802816 CTGTCCCTAGTTGCGCAATATC 59.197 50.000 27.79 13.84 0.00 1.63
2018 2718 2.434336 TCTGTCCCTAGTTGCGCAATAT 59.566 45.455 27.79 19.99 0.00 1.28
2021 2721 0.613260 ATCTGTCCCTAGTTGCGCAA 59.387 50.000 21.02 21.02 0.00 4.85
2023 2723 1.269831 CCTATCTGTCCCTAGTTGCGC 60.270 57.143 0.00 0.00 0.00 6.09
2024 2724 2.032620 ACCTATCTGTCCCTAGTTGCG 58.967 52.381 0.00 0.00 0.00 4.85
2025 2725 2.103263 CCACCTATCTGTCCCTAGTTGC 59.897 54.545 0.00 0.00 0.00 4.17
2026 2726 3.643237 TCCACCTATCTGTCCCTAGTTG 58.357 50.000 0.00 0.00 0.00 3.16
2027 2727 4.561254 ATCCACCTATCTGTCCCTAGTT 57.439 45.455 0.00 0.00 0.00 2.24
2028 2728 4.227197 CAATCCACCTATCTGTCCCTAGT 58.773 47.826 0.00 0.00 0.00 2.57
2043 2747 3.248602 GCGAGACACATAATCCAATCCAC 59.751 47.826 0.00 0.00 0.00 4.02
2048 2752 3.521560 GTCAGCGAGACACATAATCCAA 58.478 45.455 7.37 0.00 46.77 3.53
2087 2795 2.088423 ACCGAGCAAAACACACAGAAA 58.912 42.857 0.00 0.00 0.00 2.52
2090 2798 1.533756 CCAACCGAGCAAAACACACAG 60.534 52.381 0.00 0.00 0.00 3.66
2091 2799 0.453793 CCAACCGAGCAAAACACACA 59.546 50.000 0.00 0.00 0.00 3.72
2092 2800 0.869880 GCCAACCGAGCAAAACACAC 60.870 55.000 0.00 0.00 0.00 3.82
2109 2817 2.990994 GATGATGCTCCAAGGGGGCC 62.991 65.000 4.38 0.00 36.21 5.80
2116 2824 2.042842 TCCAAAAGGGATGATGCTCCAA 59.957 45.455 0.00 0.00 42.15 3.53
2118 2826 2.442236 TCCAAAAGGGATGATGCTCC 57.558 50.000 0.00 0.00 42.15 4.70
2127 2835 4.522789 CCTCGAAGAAAAATCCAAAAGGGA 59.477 41.667 0.00 0.00 44.79 4.20
2128 2836 4.280929 ACCTCGAAGAAAAATCCAAAAGGG 59.719 41.667 0.00 0.00 34.09 3.95
2131 2839 7.383843 GCATTTACCTCGAAGAAAAATCCAAAA 59.616 33.333 0.00 0.00 34.09 2.44
2146 2854 1.670811 GACCATGGTGCATTTACCTCG 59.329 52.381 25.52 0.00 41.43 4.63
2166 2874 1.079888 GGCCGTGGCAAATTCAAGG 60.080 57.895 13.76 0.00 44.11 3.61
2206 2914 2.592102 ACCAAAGTGATCAGCCATGT 57.408 45.000 0.00 0.00 0.00 3.21
2238 2950 7.378181 CCAGTTTTACCATTTTTCTGTATGCT 58.622 34.615 0.00 0.00 0.00 3.79
2246 2958 4.988540 GGTCTGCCAGTTTTACCATTTTTC 59.011 41.667 0.00 0.00 34.09 2.29
2251 2963 2.375174 TCAGGTCTGCCAGTTTTACCAT 59.625 45.455 3.44 0.00 37.19 3.55
2256 2968 0.111253 CCCTCAGGTCTGCCAGTTTT 59.889 55.000 0.00 0.00 37.19 2.43
2257 2969 1.763770 CCCTCAGGTCTGCCAGTTT 59.236 57.895 0.00 0.00 37.19 2.66
2258 2970 2.227036 CCCCTCAGGTCTGCCAGTT 61.227 63.158 0.00 0.00 37.19 3.16
2259 2971 2.608988 CCCCTCAGGTCTGCCAGT 60.609 66.667 0.00 0.00 37.19 4.00
2260 2972 3.406200 CCCCCTCAGGTCTGCCAG 61.406 72.222 0.00 0.00 37.19 4.85
2261 2973 4.270153 ACCCCCTCAGGTCTGCCA 62.270 66.667 0.00 0.00 33.81 4.92
2267 2979 2.361085 AGTATTTGACCCCCTCAGGT 57.639 50.000 0.00 0.00 45.12 4.00
2268 2980 4.855298 TTTAGTATTTGACCCCCTCAGG 57.145 45.455 0.00 0.00 0.00 3.86
2269 2981 8.996651 ATAAATTTAGTATTTGACCCCCTCAG 57.003 34.615 3.94 0.00 0.00 3.35
2270 2982 9.856162 GTATAAATTTAGTATTTGACCCCCTCA 57.144 33.333 3.94 0.00 0.00 3.86
2273 2985 9.856162 TGAGTATAAATTTAGTATTTGACCCCC 57.144 33.333 3.94 0.00 0.00 5.40
2314 3026 9.313118 CTAAGCAAAAAGTGTGTAGGAATTTTT 57.687 29.630 0.00 0.00 34.35 1.94
2315 3027 7.926018 CCTAAGCAAAAAGTGTGTAGGAATTTT 59.074 33.333 0.00 0.00 37.76 1.82
2316 3028 7.433680 CCTAAGCAAAAAGTGTGTAGGAATTT 58.566 34.615 0.00 0.00 37.76 1.82
2317 3029 6.516693 GCCTAAGCAAAAAGTGTGTAGGAATT 60.517 38.462 0.00 0.00 37.76 2.17
2318 3030 5.048013 GCCTAAGCAAAAAGTGTGTAGGAAT 60.048 40.000 0.00 0.00 37.76 3.01
2319 3031 4.277423 GCCTAAGCAAAAAGTGTGTAGGAA 59.723 41.667 0.00 0.00 37.76 3.36
2320 3032 3.818773 GCCTAAGCAAAAAGTGTGTAGGA 59.181 43.478 0.00 0.00 37.76 2.94
2321 3033 3.821033 AGCCTAAGCAAAAAGTGTGTAGG 59.179 43.478 0.00 0.00 43.56 3.18
2322 3034 4.320494 CCAGCCTAAGCAAAAAGTGTGTAG 60.320 45.833 0.00 0.00 43.56 2.74
2323 3035 3.568007 CCAGCCTAAGCAAAAAGTGTGTA 59.432 43.478 0.00 0.00 43.56 2.90
2324 3036 2.362077 CCAGCCTAAGCAAAAAGTGTGT 59.638 45.455 0.00 0.00 43.56 3.72
2325 3037 2.288395 CCCAGCCTAAGCAAAAAGTGTG 60.288 50.000 0.00 0.00 43.56 3.82
2326 3038 1.963515 CCCAGCCTAAGCAAAAAGTGT 59.036 47.619 0.00 0.00 43.56 3.55
2327 3039 1.273327 CCCCAGCCTAAGCAAAAAGTG 59.727 52.381 0.00 0.00 43.56 3.16
2328 3040 1.632589 CCCCAGCCTAAGCAAAAAGT 58.367 50.000 0.00 0.00 43.56 2.66
2329 3041 0.897621 CCCCCAGCCTAAGCAAAAAG 59.102 55.000 0.00 0.00 43.56 2.27
2330 3042 3.065462 CCCCCAGCCTAAGCAAAAA 57.935 52.632 0.00 0.00 43.56 1.94
2331 3043 4.863415 CCCCCAGCCTAAGCAAAA 57.137 55.556 0.00 0.00 43.56 2.44
2345 3057 4.678743 GGAGGTGTTGTGGCCCCC 62.679 72.222 0.00 0.00 0.00 5.40
2346 3058 3.868200 CTGGAGGTGTTGTGGCCCC 62.868 68.421 0.00 0.00 0.00 5.80
2347 3059 2.282462 CTGGAGGTGTTGTGGCCC 60.282 66.667 0.00 0.00 0.00 5.80
2348 3060 2.282462 CCTGGAGGTGTTGTGGCC 60.282 66.667 0.00 0.00 0.00 5.36
2349 3061 1.302832 CTCCTGGAGGTGTTGTGGC 60.303 63.158 16.19 0.00 36.34 5.01
2350 3062 1.302832 GCTCCTGGAGGTGTTGTGG 60.303 63.158 24.43 0.00 36.34 4.17
2351 3063 0.886490 GTGCTCCTGGAGGTGTTGTG 60.886 60.000 24.43 0.00 36.34 3.33
2352 3064 1.344953 TGTGCTCCTGGAGGTGTTGT 61.345 55.000 24.43 0.00 36.34 3.32
2353 3065 0.886490 GTGTGCTCCTGGAGGTGTTG 60.886 60.000 24.43 0.00 36.34 3.33
2354 3066 1.344953 TGTGTGCTCCTGGAGGTGTT 61.345 55.000 24.43 0.00 36.34 3.32
2355 3067 1.130054 ATGTGTGCTCCTGGAGGTGT 61.130 55.000 24.43 0.00 36.34 4.16
2356 3068 0.904649 TATGTGTGCTCCTGGAGGTG 59.095 55.000 24.43 1.22 36.34 4.00
2357 3069 1.198713 CTATGTGTGCTCCTGGAGGT 58.801 55.000 24.43 0.00 36.34 3.85
2358 3070 0.179062 GCTATGTGTGCTCCTGGAGG 60.179 60.000 24.43 6.88 0.00 4.30
2359 3071 0.829333 AGCTATGTGTGCTCCTGGAG 59.171 55.000 19.55 19.55 35.67 3.86
2360 3072 2.996985 AGCTATGTGTGCTCCTGGA 58.003 52.632 0.00 0.00 35.67 3.86
2388 3100 1.466856 ACACATGTATTGCCTGCAGG 58.533 50.000 29.34 29.34 38.53 4.85
2389 3101 2.476686 CGAACACATGTATTGCCTGCAG 60.477 50.000 6.78 6.78 0.00 4.41
2390 3102 1.468127 CGAACACATGTATTGCCTGCA 59.532 47.619 0.00 0.00 0.00 4.41
2391 3103 1.737236 TCGAACACATGTATTGCCTGC 59.263 47.619 0.00 0.00 0.00 4.85
2392 3104 3.002656 GGATCGAACACATGTATTGCCTG 59.997 47.826 0.00 0.00 0.00 4.85
2393 3105 3.206150 GGATCGAACACATGTATTGCCT 58.794 45.455 0.00 0.00 0.00 4.75
2394 3106 2.032894 CGGATCGAACACATGTATTGCC 60.033 50.000 0.00 0.00 0.00 4.52
2395 3107 2.863740 TCGGATCGAACACATGTATTGC 59.136 45.455 0.00 0.00 31.06 3.56
2396 3108 3.862845 TGTCGGATCGAACACATGTATTG 59.137 43.478 0.00 0.00 37.72 1.90
2397 3109 4.118093 TGTCGGATCGAACACATGTATT 57.882 40.909 0.00 0.00 37.72 1.89
2398 3110 3.793797 TGTCGGATCGAACACATGTAT 57.206 42.857 0.00 0.00 37.72 2.29
2399 3111 3.579335 TTGTCGGATCGAACACATGTA 57.421 42.857 0.00 0.00 37.72 2.29
2400 3112 2.448926 TTGTCGGATCGAACACATGT 57.551 45.000 0.00 0.00 37.72 3.21
2401 3113 2.472235 CGTTTGTCGGATCGAACACATG 60.472 50.000 0.00 0.00 37.72 3.21
2402 3114 1.724623 CGTTTGTCGGATCGAACACAT 59.275 47.619 0.00 0.00 37.72 3.21
2403 3115 1.133407 CGTTTGTCGGATCGAACACA 58.867 50.000 0.00 0.00 37.72 3.72
2404 3116 0.179258 GCGTTTGTCGGATCGAACAC 60.179 55.000 0.00 0.00 37.72 3.32
2405 3117 1.610715 CGCGTTTGTCGGATCGAACA 61.611 55.000 0.00 0.00 37.72 3.18
2406 3118 1.056750 CGCGTTTGTCGGATCGAAC 59.943 57.895 0.00 0.00 37.72 3.95
2407 3119 3.454574 CGCGTTTGTCGGATCGAA 58.545 55.556 0.00 0.00 37.72 3.71
2413 3125 1.698714 GGATAACCCGCGTTTGTCGG 61.699 60.000 4.92 0.00 46.05 4.79
2414 3126 1.711500 GGATAACCCGCGTTTGTCG 59.289 57.895 4.92 0.00 43.12 4.35
2425 3137 2.943033 CGTTCATTGGAGTGGGATAACC 59.057 50.000 0.00 0.00 40.81 2.85
2426 3138 3.869065 TCGTTCATTGGAGTGGGATAAC 58.131 45.455 0.00 0.00 0.00 1.89
2427 3139 4.080582 ACATCGTTCATTGGAGTGGGATAA 60.081 41.667 0.00 0.00 0.00 1.75
2428 3140 3.454447 ACATCGTTCATTGGAGTGGGATA 59.546 43.478 0.00 0.00 0.00 2.59
2429 3141 2.239654 ACATCGTTCATTGGAGTGGGAT 59.760 45.455 0.00 0.00 0.00 3.85
2430 3142 1.628340 ACATCGTTCATTGGAGTGGGA 59.372 47.619 0.00 0.00 0.00 4.37
2431 3143 2.113860 ACATCGTTCATTGGAGTGGG 57.886 50.000 0.00 0.00 0.00 4.61
2432 3144 3.501828 TGAAACATCGTTCATTGGAGTGG 59.498 43.478 0.00 0.00 32.56 4.00
2433 3145 4.747540 TGAAACATCGTTCATTGGAGTG 57.252 40.909 0.00 0.00 32.56 3.51
2434 3146 5.003160 TCATGAAACATCGTTCATTGGAGT 58.997 37.500 0.00 0.00 44.09 3.85
2435 3147 5.122869 AGTCATGAAACATCGTTCATTGGAG 59.877 40.000 0.00 0.00 44.09 3.86
2436 3148 5.003160 AGTCATGAAACATCGTTCATTGGA 58.997 37.500 0.00 0.00 44.09 3.53
2437 3149 5.090757 CAGTCATGAAACATCGTTCATTGG 58.909 41.667 0.00 0.00 44.09 3.16
2438 3150 5.692814 ACAGTCATGAAACATCGTTCATTG 58.307 37.500 0.00 0.00 44.09 2.82
2439 3151 5.947228 ACAGTCATGAAACATCGTTCATT 57.053 34.783 0.00 0.00 44.09 2.57
2440 3152 5.106555 GGAACAGTCATGAAACATCGTTCAT 60.107 40.000 0.00 0.00 46.77 2.57
2441 3153 4.213270 GGAACAGTCATGAAACATCGTTCA 59.787 41.667 0.00 0.00 41.59 3.18
2442 3154 4.666655 CGGAACAGTCATGAAACATCGTTC 60.667 45.833 0.00 4.53 0.00 3.95
2443 3155 3.186409 CGGAACAGTCATGAAACATCGTT 59.814 43.478 0.00 0.00 0.00 3.85
2444 3156 2.736721 CGGAACAGTCATGAAACATCGT 59.263 45.455 0.00 0.00 0.00 3.73
2445 3157 2.094258 CCGGAACAGTCATGAAACATCG 59.906 50.000 0.00 0.00 0.00 3.84
2446 3158 2.159517 GCCGGAACAGTCATGAAACATC 60.160 50.000 5.05 0.00 0.00 3.06
2447 3159 1.812571 GCCGGAACAGTCATGAAACAT 59.187 47.619 5.05 0.00 0.00 2.71
2448 3160 1.202758 AGCCGGAACAGTCATGAAACA 60.203 47.619 5.05 0.00 0.00 2.83
2449 3161 1.523758 AGCCGGAACAGTCATGAAAC 58.476 50.000 5.05 0.00 0.00 2.78
2450 3162 3.270027 CATAGCCGGAACAGTCATGAAA 58.730 45.455 5.05 0.00 0.00 2.69
2451 3163 2.236146 ACATAGCCGGAACAGTCATGAA 59.764 45.455 5.05 0.00 0.00 2.57
2452 3164 1.831106 ACATAGCCGGAACAGTCATGA 59.169 47.619 5.05 0.00 0.00 3.07
2453 3165 2.205074 GACATAGCCGGAACAGTCATG 58.795 52.381 5.05 0.00 0.00 3.07
2454 3166 1.139058 GGACATAGCCGGAACAGTCAT 59.861 52.381 5.05 0.00 0.00 3.06
2455 3167 0.535335 GGACATAGCCGGAACAGTCA 59.465 55.000 5.05 0.00 0.00 3.41
2456 3168 3.364277 GGACATAGCCGGAACAGTC 57.636 57.895 5.05 7.35 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.