Multiple sequence alignment - TraesCS3B01G430300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G430300 | chr3B | 100.000 | 4368 | 0 | 0 | 1 | 4368 | 669710018 | 669714385 | 0.000000e+00 | 8067 |
1 | TraesCS3B01G430300 | chr3B | 85.804 | 479 | 61 | 6 | 1179 | 1654 | 262230889 | 262230415 | 6.520000e-138 | 501 |
2 | TraesCS3B01G430300 | chr3B | 95.628 | 183 | 8 | 0 | 3816 | 3998 | 117922378 | 117922560 | 1.190000e-75 | 294 |
3 | TraesCS3B01G430300 | chr3B | 93.966 | 116 | 7 | 0 | 3997 | 4112 | 534258273 | 534258158 | 4.490000e-40 | 176 |
4 | TraesCS3B01G430300 | chr3B | 95.413 | 109 | 5 | 0 | 3997 | 4105 | 570934225 | 570934333 | 1.610000e-39 | 174 |
5 | TraesCS3B01G430300 | chr3A | 89.038 | 2682 | 205 | 59 | 101 | 2740 | 645541953 | 645544587 | 0.000000e+00 | 3241 |
6 | TraesCS3B01G430300 | chr3A | 92.692 | 1081 | 56 | 10 | 2743 | 3817 | 645545148 | 645546211 | 0.000000e+00 | 1537 |
7 | TraesCS3B01G430300 | chr3A | 86.765 | 272 | 22 | 6 | 4103 | 4368 | 645546212 | 645546475 | 1.540000e-74 | 291 |
8 | TraesCS3B01G430300 | chr3A | 91.848 | 184 | 15 | 0 | 3815 | 3998 | 135972569 | 135972386 | 1.560000e-64 | 257 |
9 | TraesCS3B01G430300 | chr3A | 94.595 | 111 | 6 | 0 | 3997 | 4107 | 55506826 | 55506936 | 5.810000e-39 | 172 |
10 | TraesCS3B01G430300 | chr3D | 92.843 | 2026 | 102 | 25 | 729 | 2740 | 507486182 | 507488178 | 0.000000e+00 | 2898 |
11 | TraesCS3B01G430300 | chr3D | 91.648 | 910 | 56 | 9 | 2743 | 3646 | 507488367 | 507489262 | 0.000000e+00 | 1242 |
12 | TraesCS3B01G430300 | chr3D | 83.280 | 622 | 77 | 18 | 3 | 610 | 507485312 | 507485920 | 8.260000e-152 | 547 |
13 | TraesCS3B01G430300 | chr3D | 90.943 | 265 | 13 | 5 | 4107 | 4368 | 507489550 | 507489806 | 3.230000e-91 | 346 |
14 | TraesCS3B01G430300 | chr3D | 91.848 | 184 | 15 | 0 | 3815 | 3998 | 554149784 | 554149967 | 1.560000e-64 | 257 |
15 | TraesCS3B01G430300 | chr3D | 95.139 | 144 | 7 | 0 | 3671 | 3814 | 507489396 | 507489539 | 1.220000e-55 | 228 |
16 | TraesCS3B01G430300 | chr3D | 85.446 | 213 | 27 | 3 | 1669 | 1878 | 507766350 | 507766561 | 7.360000e-53 | 219 |
17 | TraesCS3B01G430300 | chr3D | 93.671 | 79 | 1 | 2 | 2114 | 2192 | 507768512 | 507768586 | 9.930000e-22 | 115 |
18 | TraesCS3B01G430300 | chrUn | 88.084 | 663 | 72 | 7 | 970 | 1628 | 361569710 | 361569051 | 0.000000e+00 | 780 |
19 | TraesCS3B01G430300 | chr7A | 83.275 | 855 | 114 | 16 | 1885 | 2728 | 642740184 | 642739348 | 0.000000e+00 | 760 |
20 | TraesCS3B01G430300 | chr1A | 88.406 | 483 | 51 | 5 | 1176 | 1654 | 206112018 | 206112499 | 1.050000e-160 | 577 |
21 | TraesCS3B01G430300 | chr1A | 96.045 | 177 | 7 | 0 | 3835 | 4011 | 582764912 | 582765088 | 5.530000e-74 | 289 |
22 | TraesCS3B01G430300 | chr1A | 93.443 | 183 | 12 | 0 | 3816 | 3998 | 243163740 | 243163922 | 5.570000e-69 | 272 |
23 | TraesCS3B01G430300 | chr4A | 88.174 | 482 | 53 | 4 | 1176 | 1654 | 653268057 | 653267577 | 4.900000e-159 | 571 |
24 | TraesCS3B01G430300 | chr4A | 87.759 | 482 | 55 | 4 | 1176 | 1654 | 409227568 | 409228048 | 1.060000e-155 | 560 |
25 | TraesCS3B01G430300 | chr4A | 88.222 | 450 | 47 | 5 | 1176 | 1621 | 555995237 | 555995684 | 2.310000e-147 | 532 |
26 | TraesCS3B01G430300 | chr4A | 99.390 | 164 | 1 | 0 | 3835 | 3998 | 621704668 | 621704831 | 9.180000e-77 | 298 |
27 | TraesCS3B01G430300 | chr4A | 96.532 | 173 | 4 | 2 | 3832 | 4003 | 464567602 | 464567431 | 7.150000e-73 | 285 |
28 | TraesCS3B01G430300 | chr6B | 87.734 | 481 | 46 | 10 | 1176 | 1654 | 708774616 | 708775085 | 2.300000e-152 | 549 |
29 | TraesCS3B01G430300 | chr6B | 84.932 | 292 | 39 | 5 | 3816 | 4105 | 280297500 | 280297212 | 1.540000e-74 | 291 |
30 | TraesCS3B01G430300 | chr6B | 90.323 | 186 | 16 | 2 | 3814 | 3998 | 160917033 | 160917217 | 4.360000e-60 | 243 |
31 | TraesCS3B01G430300 | chr6B | 83.929 | 168 | 25 | 2 | 3938 | 4104 | 687041611 | 687041445 | 4.520000e-35 | 159 |
32 | TraesCS3B01G430300 | chr2D | 80.676 | 740 | 92 | 19 | 1985 | 2719 | 16268081 | 16267388 | 1.080000e-145 | 527 |
33 | TraesCS3B01G430300 | chr2D | 94.643 | 112 | 6 | 0 | 3997 | 4108 | 484901240 | 484901129 | 1.610000e-39 | 174 |
34 | TraesCS3B01G430300 | chr7D | 82.787 | 488 | 75 | 4 | 2260 | 2740 | 578158453 | 578158938 | 1.120000e-115 | 427 |
35 | TraesCS3B01G430300 | chr7D | 90.710 | 183 | 17 | 0 | 3816 | 3998 | 265173300 | 265173482 | 1.210000e-60 | 244 |
36 | TraesCS3B01G430300 | chr5B | 83.607 | 427 | 44 | 11 | 2236 | 2656 | 338479111 | 338479517 | 1.150000e-100 | 377 |
37 | TraesCS3B01G430300 | chr5A | 99.394 | 165 | 1 | 0 | 3834 | 3998 | 452933406 | 452933242 | 2.550000e-77 | 300 |
38 | TraesCS3B01G430300 | chr5A | 86.026 | 229 | 27 | 5 | 2515 | 2740 | 610215961 | 610216187 | 1.570000e-59 | 241 |
39 | TraesCS3B01G430300 | chr2A | 94.595 | 185 | 8 | 2 | 3831 | 4013 | 61476166 | 61475982 | 7.150000e-73 | 285 |
40 | TraesCS3B01G430300 | chr2A | 94.536 | 183 | 10 | 0 | 3816 | 3998 | 729289097 | 729288915 | 2.570000e-72 | 283 |
41 | TraesCS3B01G430300 | chr6A | 94.944 | 178 | 9 | 0 | 3834 | 4011 | 78517540 | 78517717 | 3.330000e-71 | 279 |
42 | TraesCS3B01G430300 | chr4D | 90.761 | 184 | 16 | 1 | 3816 | 3998 | 238640348 | 238640165 | 1.210000e-60 | 244 |
43 | TraesCS3B01G430300 | chr7B | 94.643 | 112 | 6 | 0 | 3997 | 4108 | 73567177 | 73567066 | 1.610000e-39 | 174 |
44 | TraesCS3B01G430300 | chr7B | 85.135 | 148 | 20 | 2 | 3958 | 4104 | 560248585 | 560248731 | 2.720000e-32 | 150 |
45 | TraesCS3B01G430300 | chr1B | 93.043 | 115 | 8 | 0 | 3997 | 4111 | 345304255 | 345304141 | 7.510000e-38 | 169 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G430300 | chr3B | 669710018 | 669714385 | 4367 | False | 8067.000000 | 8067 | 100.000000 | 1 | 4368 | 1 | chr3B.!!$F3 | 4367 |
1 | TraesCS3B01G430300 | chr3A | 645541953 | 645546475 | 4522 | False | 1689.666667 | 3241 | 89.498333 | 101 | 4368 | 3 | chr3A.!!$F2 | 4267 |
2 | TraesCS3B01G430300 | chr3D | 507485312 | 507489806 | 4494 | False | 1052.200000 | 2898 | 90.770600 | 3 | 4368 | 5 | chr3D.!!$F2 | 4365 |
3 | TraesCS3B01G430300 | chrUn | 361569051 | 361569710 | 659 | True | 780.000000 | 780 | 88.084000 | 970 | 1628 | 1 | chrUn.!!$R1 | 658 |
4 | TraesCS3B01G430300 | chr7A | 642739348 | 642740184 | 836 | True | 760.000000 | 760 | 83.275000 | 1885 | 2728 | 1 | chr7A.!!$R1 | 843 |
5 | TraesCS3B01G430300 | chr2D | 16267388 | 16268081 | 693 | True | 527.000000 | 527 | 80.676000 | 1985 | 2719 | 1 | chr2D.!!$R1 | 734 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
229 | 233 | 0.037326 | TTCTTCTTCGACGCCTGCAT | 60.037 | 50.0 | 0.00 | 0.0 | 0.00 | 3.96 | F |
345 | 350 | 0.039527 | GCAACCATTTGTGTCGTCCC | 60.040 | 55.0 | 0.00 | 0.0 | 34.90 | 4.46 | F |
373 | 378 | 0.179000 | CTCGTAGCTTTGGGCCTCAT | 59.821 | 55.0 | 4.53 | 0.0 | 43.05 | 2.90 | F |
1752 | 1987 | 0.397941 | TGAAGCCCACTCTGGACAAG | 59.602 | 55.0 | 0.00 | 0.0 | 40.96 | 3.16 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1692 | 1923 | 0.318699 | TCAACGAAGACACGGCAGAG | 60.319 | 55.0 | 0.00 | 0.00 | 37.61 | 3.35 | R |
1752 | 1987 | 0.395448 | AGTAGAGGGACGGCCAGTAC | 60.395 | 60.0 | 11.00 | 7.29 | 35.15 | 2.73 | R |
2127 | 2363 | 2.159421 | GCATGTTCCATGCTTCTCTGTG | 60.159 | 50.0 | 19.18 | 0.00 | 41.52 | 3.66 | R |
3740 | 4695 | 0.389817 | TCAAGAATGTCTCGGTGGCG | 60.390 | 55.0 | 0.00 | 0.00 | 0.00 | 5.69 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
51 | 52 | 4.584327 | AGTGTCACTTGTTTTTATGCCC | 57.416 | 40.909 | 0.00 | 0.00 | 0.00 | 5.36 |
59 | 60 | 0.388006 | GTTTTTATGCCCGCGTGCTT | 60.388 | 50.000 | 16.01 | 11.38 | 0.00 | 3.91 |
60 | 61 | 0.315568 | TTTTTATGCCCGCGTGCTTT | 59.684 | 45.000 | 16.01 | 4.96 | 0.00 | 3.51 |
61 | 62 | 0.315568 | TTTTATGCCCGCGTGCTTTT | 59.684 | 45.000 | 16.01 | 2.29 | 0.00 | 2.27 |
62 | 63 | 0.315568 | TTTATGCCCGCGTGCTTTTT | 59.684 | 45.000 | 16.01 | 0.00 | 0.00 | 1.94 |
64 | 65 | 1.928706 | TATGCCCGCGTGCTTTTTCC | 61.929 | 55.000 | 16.01 | 0.00 | 0.00 | 3.13 |
66 | 67 | 2.983592 | CCCGCGTGCTTTTTCCCT | 60.984 | 61.111 | 4.92 | 0.00 | 0.00 | 4.20 |
68 | 69 | 2.173382 | CGCGTGCTTTTTCCCTCG | 59.827 | 61.111 | 0.00 | 0.00 | 0.00 | 4.63 |
70 | 71 | 1.206831 | GCGTGCTTTTTCCCTCGTC | 59.793 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
71 | 72 | 1.866925 | CGTGCTTTTTCCCTCGTCC | 59.133 | 57.895 | 0.00 | 0.00 | 0.00 | 4.79 |
82 | 83 | 1.639628 | TCCCTCGTCCTCTTCCTACTT | 59.360 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
83 | 84 | 1.751924 | CCCTCGTCCTCTTCCTACTTG | 59.248 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
85 | 86 | 1.751924 | CTCGTCCTCTTCCTACTTGGG | 59.248 | 57.143 | 0.00 | 0.00 | 36.20 | 4.12 |
86 | 87 | 1.076677 | TCGTCCTCTTCCTACTTGGGT | 59.923 | 52.381 | 0.00 | 0.00 | 36.20 | 4.51 |
177 | 181 | 4.334118 | TGCACCACATCGCTGCCT | 62.334 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
193 | 197 | 3.873801 | GCTGCCTGACCATCCTTCTTTTA | 60.874 | 47.826 | 0.00 | 0.00 | 0.00 | 1.52 |
194 | 198 | 4.530875 | CTGCCTGACCATCCTTCTTTTAT | 58.469 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
225 | 229 | 1.535833 | TCTCTTCTTCTTCGACGCCT | 58.464 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
229 | 233 | 0.037326 | TTCTTCTTCGACGCCTGCAT | 60.037 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
238 | 242 | 4.720902 | CGCCTGCATCCCACCACA | 62.721 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
244 | 248 | 1.228245 | GCATCCCACCACACACACT | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
258 | 262 | 1.217882 | CACACTGAACCGTCAAGTCC | 58.782 | 55.000 | 0.00 | 0.00 | 31.88 | 3.85 |
281 | 285 | 1.648467 | GCTTTCTCCCGCAAGCGATT | 61.648 | 55.000 | 16.97 | 0.00 | 42.83 | 3.34 |
289 | 293 | 2.746277 | GCAAGCGATTCCACGGGT | 60.746 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
330 | 335 | 2.737376 | GGTCGAGGACACCGCAAC | 60.737 | 66.667 | 0.00 | 0.00 | 33.68 | 4.17 |
334 | 339 | 1.671054 | CGAGGACACCGCAACCATT | 60.671 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
345 | 350 | 0.039527 | GCAACCATTTGTGTCGTCCC | 60.040 | 55.000 | 0.00 | 0.00 | 34.90 | 4.46 |
367 | 372 | 0.179134 | CTCCGTCTCGTAGCTTTGGG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.12 |
373 | 378 | 0.179000 | CTCGTAGCTTTGGGCCTCAT | 59.821 | 55.000 | 4.53 | 0.00 | 43.05 | 2.90 |
378 | 383 | 2.845363 | AGCTTTGGGCCTCATTTTTG | 57.155 | 45.000 | 4.53 | 0.00 | 43.05 | 2.44 |
405 | 410 | 2.151202 | ACAAAATCGACTTGCACCGAT | 58.849 | 42.857 | 10.82 | 10.82 | 46.08 | 4.18 |
415 | 422 | 3.964909 | ACTTGCACCGATTCTTTTTCAC | 58.035 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
423 | 430 | 4.334481 | ACCGATTCTTTTTCACGTGACTTT | 59.666 | 37.500 | 19.90 | 0.00 | 0.00 | 2.66 |
428 | 435 | 8.270799 | CGATTCTTTTTCACGTGACTTTAGTTA | 58.729 | 33.333 | 19.90 | 0.00 | 0.00 | 2.24 |
527 | 536 | 8.673626 | AAATAAACAGAATAACATGCACTTCG | 57.326 | 30.769 | 0.00 | 0.00 | 0.00 | 3.79 |
573 | 586 | 8.756927 | TCAAAATATATCTGTTTTTGCATGGGA | 58.243 | 29.630 | 0.00 | 0.00 | 39.20 | 4.37 |
592 | 605 | 8.370182 | GCATGGGAATTTCAAAATATATCCACT | 58.630 | 33.333 | 0.00 | 0.00 | 28.71 | 4.00 |
612 | 625 | 3.574826 | ACTAGACCGAGCCTATCAATTCC | 59.425 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
613 | 626 | 1.341531 | AGACCGAGCCTATCAATTCCG | 59.658 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
617 | 630 | 2.329379 | CGAGCCTATCAATTCCGTAGC | 58.671 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
622 | 635 | 5.925509 | AGCCTATCAATTCCGTAGCTTAAA | 58.074 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
623 | 636 | 6.354130 | AGCCTATCAATTCCGTAGCTTAAAA | 58.646 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
630 | 643 | 4.957759 | TTCCGTAGCTTAAAATGCTTCC | 57.042 | 40.909 | 0.00 | 0.00 | 41.46 | 3.46 |
635 | 839 | 2.369394 | AGCTTAAAATGCTTCCCTCCG | 58.631 | 47.619 | 0.00 | 0.00 | 37.52 | 4.63 |
637 | 841 | 3.054655 | AGCTTAAAATGCTTCCCTCCGTA | 60.055 | 43.478 | 0.00 | 0.00 | 37.52 | 4.02 |
640 | 844 | 5.336134 | GCTTAAAATGCTTCCCTCCGTAAAA | 60.336 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
675 | 879 | 7.553334 | AGCCGTTTAGATCATTAAAGTAGTGA | 58.447 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
676 | 880 | 7.491696 | AGCCGTTTAGATCATTAAAGTAGTGAC | 59.508 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
678 | 882 | 8.592998 | CCGTTTAGATCATTAAAGTAGTGACAC | 58.407 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
679 | 883 | 9.355215 | CGTTTAGATCATTAAAGTAGTGACACT | 57.645 | 33.333 | 13.68 | 13.68 | 0.00 | 3.55 |
711 | 918 | 2.526888 | TGTAGAGGGAGTCGATGGTT | 57.473 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
713 | 920 | 2.496070 | TGTAGAGGGAGTCGATGGTTTG | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
714 | 921 | 1.645710 | AGAGGGAGTCGATGGTTTGT | 58.354 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
717 | 924 | 2.742589 | GAGGGAGTCGATGGTTTGTTTC | 59.257 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
748 | 955 | 1.381928 | CGGCAGAGCTACCGGTAGAA | 61.382 | 60.000 | 39.65 | 10.85 | 45.74 | 2.10 |
867 | 1076 | 0.617820 | AGGTCATCCCTAACCGCACT | 60.618 | 55.000 | 0.00 | 0.00 | 43.87 | 4.40 |
883 | 1092 | 3.252458 | CCGCACTATTATTAAAGCACCCC | 59.748 | 47.826 | 0.00 | 0.00 | 0.00 | 4.95 |
907 | 1116 | 3.317150 | TGCGTCTTGATTGTACTCTGTG | 58.683 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
1237 | 1457 | 1.006758 | TCCGCCTCCTCTTTTCCTCTA | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
1463 | 1686 | 4.918810 | AATTTTGTGCTTTCTCGGTTCT | 57.081 | 36.364 | 0.00 | 0.00 | 0.00 | 3.01 |
1474 | 1697 | 2.439409 | TCTCGGTTCTTGGTCGATGTA | 58.561 | 47.619 | 0.00 | 0.00 | 32.32 | 2.29 |
1475 | 1698 | 2.422479 | TCTCGGTTCTTGGTCGATGTAG | 59.578 | 50.000 | 0.00 | 0.00 | 32.32 | 2.74 |
1477 | 1700 | 2.821378 | TCGGTTCTTGGTCGATGTAGAA | 59.179 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
1479 | 1702 | 4.081862 | TCGGTTCTTGGTCGATGTAGAATT | 60.082 | 41.667 | 8.62 | 0.00 | 0.00 | 2.17 |
1512 | 1736 | 1.672881 | GTTGGATTTCCGCTGATGGAG | 59.327 | 52.381 | 0.00 | 0.00 | 39.72 | 3.86 |
1594 | 1819 | 0.605319 | TTCGACATGGACAAGGTGCC | 60.605 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1629 | 1860 | 0.750546 | ACTGATACGTGGCCGCTCTA | 60.751 | 55.000 | 15.69 | 3.81 | 37.70 | 2.43 |
1639 | 1870 | 1.069204 | TGGCCGCTCTAGCTTCATTAG | 59.931 | 52.381 | 0.00 | 0.00 | 39.32 | 1.73 |
1692 | 1923 | 1.026182 | TGACCTCGTTGATGCATGGC | 61.026 | 55.000 | 2.46 | 0.00 | 0.00 | 4.40 |
1707 | 1938 | 2.811317 | GGCTCTGCCGTGTCTTCG | 60.811 | 66.667 | 0.00 | 0.00 | 39.62 | 3.79 |
1715 | 1950 | 1.944024 | TGCCGTGTCTTCGTTGATTTT | 59.056 | 42.857 | 0.00 | 0.00 | 0.00 | 1.82 |
1723 | 1958 | 5.235616 | GTGTCTTCGTTGATTTTGGTGTAGA | 59.764 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1752 | 1987 | 0.397941 | TGAAGCCCACTCTGGACAAG | 59.602 | 55.000 | 0.00 | 0.00 | 40.96 | 3.16 |
1856 | 2091 | 5.178438 | GTCAGAACTGTTGGATTGAACTCTC | 59.822 | 44.000 | 0.00 | 0.00 | 0.00 | 3.20 |
1858 | 2093 | 5.178996 | CAGAACTGTTGGATTGAACTCTCAG | 59.821 | 44.000 | 0.00 | 0.00 | 31.69 | 3.35 |
1860 | 2095 | 5.296151 | ACTGTTGGATTGAACTCTCAGAA | 57.704 | 39.130 | 0.00 | 0.00 | 31.69 | 3.02 |
1864 | 2099 | 7.009179 | TGTTGGATTGAACTCTCAGAATACT | 57.991 | 36.000 | 0.00 | 0.00 | 31.69 | 2.12 |
1865 | 2100 | 7.099764 | TGTTGGATTGAACTCTCAGAATACTC | 58.900 | 38.462 | 0.00 | 0.00 | 31.69 | 2.59 |
1866 | 2101 | 6.227298 | TGGATTGAACTCTCAGAATACTCC | 57.773 | 41.667 | 0.00 | 0.00 | 31.69 | 3.85 |
1867 | 2102 | 5.960811 | TGGATTGAACTCTCAGAATACTCCT | 59.039 | 40.000 | 0.00 | 0.00 | 31.69 | 3.69 |
1868 | 2103 | 6.097554 | TGGATTGAACTCTCAGAATACTCCTC | 59.902 | 42.308 | 0.00 | 0.00 | 31.69 | 3.71 |
1869 | 2104 | 5.568685 | TTGAACTCTCAGAATACTCCTCG | 57.431 | 43.478 | 0.00 | 0.00 | 31.69 | 4.63 |
1870 | 2105 | 4.844884 | TGAACTCTCAGAATACTCCTCGA | 58.155 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
1871 | 2106 | 5.441500 | TGAACTCTCAGAATACTCCTCGAT | 58.558 | 41.667 | 0.00 | 0.00 | 0.00 | 3.59 |
1872 | 2107 | 5.888724 | TGAACTCTCAGAATACTCCTCGATT | 59.111 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
1873 | 2108 | 5.766150 | ACTCTCAGAATACTCCTCGATTG | 57.234 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
1874 | 2109 | 4.582656 | ACTCTCAGAATACTCCTCGATTGG | 59.417 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
1875 | 2110 | 4.537751 | TCTCAGAATACTCCTCGATTGGT | 58.462 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
1876 | 2111 | 5.691896 | TCTCAGAATACTCCTCGATTGGTA | 58.308 | 41.667 | 0.00 | 0.00 | 0.00 | 3.25 |
1939 | 2175 | 5.868801 | CCTTACCTGTTGTTTTGCATAATGG | 59.131 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1977 | 2213 | 3.392882 | TCGATCGGTCATTCATGGATTG | 58.607 | 45.455 | 16.41 | 0.00 | 0.00 | 2.67 |
1980 | 2216 | 2.291365 | TCGGTCATTCATGGATTGCTG | 58.709 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
2086 | 2322 | 5.981088 | TCCATATGAGCACAAACATTGTT | 57.019 | 34.783 | 3.65 | 0.00 | 43.23 | 2.83 |
2107 | 2343 | 7.288810 | TGTTTCATTTCCATTGCTAAGTCTT | 57.711 | 32.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2245 | 2481 | 3.455910 | AGTAAGCATCTGGCCATTGACTA | 59.544 | 43.478 | 17.64 | 6.61 | 46.50 | 2.59 |
2371 | 2610 | 8.531530 | CCAGATGAAGAAAACAAACTTAAAACG | 58.468 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
2604 | 2852 | 3.904339 | AGGGCTCAGTTGAAGAACTAAGA | 59.096 | 43.478 | 0.00 | 0.00 | 40.68 | 2.10 |
2659 | 2907 | 3.202151 | TCTTTTGTCCTTGGACAGGTCTT | 59.798 | 43.478 | 20.03 | 0.00 | 44.37 | 3.01 |
2668 | 2916 | 1.343465 | TGGACAGGTCTTCTCGGTTTC | 59.657 | 52.381 | 0.00 | 0.00 | 0.00 | 2.78 |
2680 | 2928 | 8.517056 | GGTCTTCTCGGTTTCCATTTTTATTTA | 58.483 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2730 | 2982 | 2.016318 | TGTTGCCACAACAGTTCTGAG | 58.984 | 47.619 | 8.99 | 1.83 | 0.00 | 3.35 |
2740 | 2992 | 3.674528 | ACAGTTCTGAGTGATGTCCAG | 57.325 | 47.619 | 6.83 | 0.00 | 0.00 | 3.86 |
2766 | 3604 | 9.284594 | GCATACGATCAACTATCTCTCTAAATC | 57.715 | 37.037 | 0.00 | 0.00 | 31.87 | 2.17 |
2823 | 3662 | 4.398988 | TGAATGGAATGGCATAACTGTGTC | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2824 | 3663 | 3.719268 | TGGAATGGCATAACTGTGTCT | 57.281 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
2825 | 3664 | 3.346315 | TGGAATGGCATAACTGTGTCTG | 58.654 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2904 | 3744 | 3.618690 | ATTAGAACTCGAGGCTGCTTT | 57.381 | 42.857 | 18.41 | 0.00 | 0.00 | 3.51 |
2942 | 3782 | 0.036306 | CAGGCGTTGGTTAGGTTCCT | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3004 | 3844 | 5.957842 | CAAAGTTGGATTACCTGCAAGTA | 57.042 | 39.130 | 0.00 | 0.00 | 37.82 | 2.24 |
3009 | 3849 | 7.539034 | AGTTGGATTACCTGCAAGTATTTTT | 57.461 | 32.000 | 0.00 | 0.00 | 37.11 | 1.94 |
3010 | 3850 | 7.378181 | AGTTGGATTACCTGCAAGTATTTTTG | 58.622 | 34.615 | 0.00 | 0.00 | 37.11 | 2.44 |
3011 | 3851 | 6.279513 | TGGATTACCTGCAAGTATTTTTGG | 57.720 | 37.500 | 0.00 | 0.00 | 37.04 | 3.28 |
3022 | 3862 | 6.485984 | TGCAAGTATTTTTGGTCAAAATGCAT | 59.514 | 30.769 | 20.78 | 11.21 | 45.29 | 3.96 |
3033 | 3873 | 7.649533 | TGGTCAAAATGCATATCTCTTCATT | 57.350 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3045 | 3885 | 7.360438 | GCATATCTCTTCATTATTCCCACGTTC | 60.360 | 40.741 | 0.00 | 0.00 | 0.00 | 3.95 |
3061 | 3901 | 3.185188 | CACGTTCTCCACTTCAGTCATTG | 59.815 | 47.826 | 0.00 | 0.00 | 0.00 | 2.82 |
3064 | 3904 | 4.988540 | CGTTCTCCACTTCAGTCATTGTTA | 59.011 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
3164 | 4004 | 2.164219 | TCGAAATCAAAGCATTGCCCTC | 59.836 | 45.455 | 4.70 | 0.00 | 36.45 | 4.30 |
3165 | 4005 | 2.533266 | GAAATCAAAGCATTGCCCTCG | 58.467 | 47.619 | 4.70 | 0.00 | 36.45 | 4.63 |
3204 | 4044 | 5.407407 | ACATATGATCCCATCGGTAAGTC | 57.593 | 43.478 | 10.38 | 0.00 | 34.31 | 3.01 |
3233 | 4073 | 9.755122 | AATCCCTTATACAGAAGCTTTTAAGTT | 57.245 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
3234 | 4074 | 9.755122 | ATCCCTTATACAGAAGCTTTTAAGTTT | 57.245 | 29.630 | 0.00 | 0.00 | 31.84 | 2.66 |
3288 | 4129 | 6.239396 | CCCATGCTAATCTTGATCTCTGAAT | 58.761 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3433 | 4274 | 0.761187 | TCTGACTGCTTGCAAGACCT | 59.239 | 50.000 | 30.39 | 10.18 | 0.00 | 3.85 |
3478 | 4320 | 2.572104 | AGATCCTGCTAAAACGGGTCTT | 59.428 | 45.455 | 0.00 | 0.00 | 37.37 | 3.01 |
3580 | 4422 | 5.426689 | AACTGCTGGATATCAAACTCAGA | 57.573 | 39.130 | 4.83 | 0.00 | 0.00 | 3.27 |
3666 | 4512 | 4.060205 | GTGGCCTGTCTAAACGTTTCTAA | 58.940 | 43.478 | 18.42 | 0.00 | 0.00 | 2.10 |
3667 | 4513 | 4.694037 | GTGGCCTGTCTAAACGTTTCTAAT | 59.306 | 41.667 | 18.42 | 0.00 | 0.00 | 1.73 |
3668 | 4514 | 5.870978 | GTGGCCTGTCTAAACGTTTCTAATA | 59.129 | 40.000 | 18.42 | 0.00 | 0.00 | 0.98 |
3740 | 4695 | 5.583495 | AGACGTACTAGCAGTTGATTGATC | 58.417 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
3742 | 4697 | 3.180584 | CGTACTAGCAGTTGATTGATCGC | 59.819 | 47.826 | 0.00 | 0.00 | 0.00 | 4.58 |
3790 | 4745 | 4.901197 | TGAGTTCAGGTGCCAAATAGTA | 57.099 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
3793 | 4748 | 6.953101 | TGAGTTCAGGTGCCAAATAGTAATA | 58.047 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
3824 | 4779 | 2.611225 | CATTCACTGCTACTCCCTCC | 57.389 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3825 | 4780 | 1.115467 | ATTCACTGCTACTCCCTCCG | 58.885 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3826 | 4781 | 0.251653 | TTCACTGCTACTCCCTCCGT | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
3827 | 4782 | 0.680280 | TCACTGCTACTCCCTCCGTC | 60.680 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3828 | 4783 | 1.380112 | ACTGCTACTCCCTCCGTCC | 60.380 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
3829 | 4784 | 2.439701 | TGCTACTCCCTCCGTCCG | 60.440 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3830 | 4785 | 3.217743 | GCTACTCCCTCCGTCCGG | 61.218 | 72.222 | 0.00 | 0.00 | 0.00 | 5.14 |
3831 | 4786 | 2.593978 | CTACTCCCTCCGTCCGGA | 59.406 | 66.667 | 0.00 | 0.00 | 42.90 | 5.14 |
3832 | 4787 | 1.077212 | CTACTCCCTCCGTCCGGAA | 60.077 | 63.158 | 5.23 | 0.00 | 44.66 | 4.30 |
3833 | 4788 | 0.682209 | CTACTCCCTCCGTCCGGAAA | 60.682 | 60.000 | 5.23 | 0.00 | 44.66 | 3.13 |
3834 | 4789 | 0.032813 | TACTCCCTCCGTCCGGAAAT | 60.033 | 55.000 | 5.23 | 0.00 | 44.66 | 2.17 |
3835 | 4790 | 0.032813 | ACTCCCTCCGTCCGGAAATA | 60.033 | 55.000 | 5.23 | 0.00 | 44.66 | 1.40 |
3836 | 4791 | 0.388294 | CTCCCTCCGTCCGGAAATAC | 59.612 | 60.000 | 5.23 | 0.00 | 44.66 | 1.89 |
3837 | 4792 | 0.032813 | TCCCTCCGTCCGGAAATACT | 60.033 | 55.000 | 5.23 | 0.00 | 44.66 | 2.12 |
3838 | 4793 | 0.388294 | CCCTCCGTCCGGAAATACTC | 59.612 | 60.000 | 5.23 | 0.00 | 44.66 | 2.59 |
3839 | 4794 | 0.388294 | CCTCCGTCCGGAAATACTCC | 59.612 | 60.000 | 5.23 | 0.00 | 44.66 | 3.85 |
3840 | 4795 | 0.388294 | CTCCGTCCGGAAATACTCCC | 59.612 | 60.000 | 5.23 | 0.00 | 44.66 | 4.30 |
3841 | 4796 | 0.032813 | TCCGTCCGGAAATACTCCCT | 60.033 | 55.000 | 5.23 | 0.00 | 41.87 | 4.20 |
3842 | 4797 | 0.388294 | CCGTCCGGAAATACTCCCTC | 59.612 | 60.000 | 5.23 | 0.00 | 41.87 | 4.30 |
3843 | 4798 | 0.388294 | CGTCCGGAAATACTCCCTCC | 59.612 | 60.000 | 5.23 | 0.00 | 41.87 | 4.30 |
3847 | 4802 | 2.220479 | CGGAAATACTCCCTCCGTTC | 57.780 | 55.000 | 1.61 | 0.00 | 45.62 | 3.95 |
3848 | 4803 | 1.202498 | CGGAAATACTCCCTCCGTTCC | 60.202 | 57.143 | 1.61 | 0.00 | 45.62 | 3.62 |
3849 | 4804 | 2.117051 | GGAAATACTCCCTCCGTTCCT | 58.883 | 52.381 | 0.00 | 0.00 | 38.44 | 3.36 |
3850 | 4805 | 3.303049 | GGAAATACTCCCTCCGTTCCTA | 58.697 | 50.000 | 0.00 | 0.00 | 38.44 | 2.94 |
3851 | 4806 | 3.708121 | GGAAATACTCCCTCCGTTCCTAA | 59.292 | 47.826 | 0.00 | 0.00 | 38.44 | 2.69 |
3852 | 4807 | 4.162888 | GGAAATACTCCCTCCGTTCCTAAA | 59.837 | 45.833 | 0.00 | 0.00 | 38.44 | 1.85 |
3853 | 4808 | 5.163227 | GGAAATACTCCCTCCGTTCCTAAAT | 60.163 | 44.000 | 0.00 | 0.00 | 38.44 | 1.40 |
3854 | 4809 | 6.042437 | GGAAATACTCCCTCCGTTCCTAAATA | 59.958 | 42.308 | 0.00 | 0.00 | 38.44 | 1.40 |
3855 | 4810 | 6.416631 | AATACTCCCTCCGTTCCTAAATAC | 57.583 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
3856 | 4811 | 3.991683 | ACTCCCTCCGTTCCTAAATACT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
3857 | 4812 | 4.359996 | ACTCCCTCCGTTCCTAAATACTT | 58.640 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
3858 | 4813 | 4.161754 | ACTCCCTCCGTTCCTAAATACTTG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
3859 | 4814 | 4.098894 | TCCCTCCGTTCCTAAATACTTGT | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3860 | 4815 | 4.161001 | TCCCTCCGTTCCTAAATACTTGTC | 59.839 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
3861 | 4816 | 4.161754 | CCCTCCGTTCCTAAATACTTGTCT | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
3862 | 4817 | 5.338137 | CCCTCCGTTCCTAAATACTTGTCTT | 60.338 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3863 | 4818 | 6.171213 | CCTCCGTTCCTAAATACTTGTCTTT | 58.829 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3864 | 4819 | 6.653740 | CCTCCGTTCCTAAATACTTGTCTTTT | 59.346 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
3865 | 4820 | 7.174426 | CCTCCGTTCCTAAATACTTGTCTTTTT | 59.826 | 37.037 | 0.00 | 0.00 | 0.00 | 1.94 |
3866 | 4821 | 9.211485 | CTCCGTTCCTAAATACTTGTCTTTTTA | 57.789 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
3867 | 4822 | 9.211485 | TCCGTTCCTAAATACTTGTCTTTTTAG | 57.789 | 33.333 | 0.00 | 0.00 | 33.47 | 1.85 |
3868 | 4823 | 8.448615 | CCGTTCCTAAATACTTGTCTTTTTAGG | 58.551 | 37.037 | 12.11 | 12.11 | 46.30 | 2.69 |
3869 | 4824 | 7.961283 | CGTTCCTAAATACTTGTCTTTTTAGGC | 59.039 | 37.037 | 13.09 | 3.06 | 45.31 | 3.93 |
3870 | 4825 | 8.789762 | GTTCCTAAATACTTGTCTTTTTAGGCA | 58.210 | 33.333 | 13.09 | 2.93 | 45.31 | 4.75 |
3871 | 4826 | 9.528489 | TTCCTAAATACTTGTCTTTTTAGGCAT | 57.472 | 29.630 | 13.09 | 0.00 | 45.31 | 4.40 |
3872 | 4827 | 9.528489 | TCCTAAATACTTGTCTTTTTAGGCATT | 57.472 | 29.630 | 13.09 | 0.00 | 45.31 | 3.56 |
3877 | 4832 | 9.476202 | AATACTTGTCTTTTTAGGCATTTCAAC | 57.524 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
3878 | 4833 | 6.872920 | ACTTGTCTTTTTAGGCATTTCAACA | 58.127 | 32.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3879 | 4834 | 7.327214 | ACTTGTCTTTTTAGGCATTTCAACAA | 58.673 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
3880 | 4835 | 7.492344 | ACTTGTCTTTTTAGGCATTTCAACAAG | 59.508 | 33.333 | 0.00 | 0.00 | 43.26 | 3.16 |
3881 | 4836 | 6.872920 | TGTCTTTTTAGGCATTTCAACAAGT | 58.127 | 32.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3882 | 4837 | 6.756074 | TGTCTTTTTAGGCATTTCAACAAGTG | 59.244 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
3883 | 4838 | 6.978080 | GTCTTTTTAGGCATTTCAACAAGTGA | 59.022 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
3884 | 4839 | 6.978080 | TCTTTTTAGGCATTTCAACAAGTGAC | 59.022 | 34.615 | 0.00 | 0.00 | 35.39 | 3.67 |
3885 | 4840 | 6.463995 | TTTTAGGCATTTCAACAAGTGACT | 57.536 | 33.333 | 0.00 | 0.00 | 40.60 | 3.41 |
3886 | 4841 | 7.575414 | TTTTAGGCATTTCAACAAGTGACTA | 57.425 | 32.000 | 0.00 | 0.00 | 38.51 | 2.59 |
3887 | 4842 | 6.554334 | TTAGGCATTTCAACAAGTGACTAC | 57.446 | 37.500 | 0.00 | 0.00 | 39.07 | 2.73 |
3888 | 4843 | 4.460263 | AGGCATTTCAACAAGTGACTACA | 58.540 | 39.130 | 0.00 | 0.00 | 35.84 | 2.74 |
3889 | 4844 | 5.072741 | AGGCATTTCAACAAGTGACTACAT | 58.927 | 37.500 | 0.00 | 0.00 | 35.84 | 2.29 |
3890 | 4845 | 6.237901 | AGGCATTTCAACAAGTGACTACATA | 58.762 | 36.000 | 0.00 | 0.00 | 35.84 | 2.29 |
3891 | 4846 | 6.149474 | AGGCATTTCAACAAGTGACTACATAC | 59.851 | 38.462 | 0.00 | 0.00 | 35.84 | 2.39 |
3892 | 4847 | 6.015504 | GCATTTCAACAAGTGACTACATACG | 58.984 | 40.000 | 0.00 | 0.00 | 35.39 | 3.06 |
3893 | 4848 | 6.534059 | CATTTCAACAAGTGACTACATACGG | 58.466 | 40.000 | 0.00 | 0.00 | 35.39 | 4.02 |
3894 | 4849 | 5.456548 | TTCAACAAGTGACTACATACGGA | 57.543 | 39.130 | 0.00 | 0.00 | 35.39 | 4.69 |
3895 | 4850 | 5.055642 | TCAACAAGTGACTACATACGGAG | 57.944 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
3896 | 4851 | 3.505464 | ACAAGTGACTACATACGGAGC | 57.495 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
3897 | 4852 | 2.823747 | ACAAGTGACTACATACGGAGCA | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
3898 | 4853 | 3.257375 | ACAAGTGACTACATACGGAGCAA | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
3899 | 4854 | 4.242475 | CAAGTGACTACATACGGAGCAAA | 58.758 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
3900 | 4855 | 4.530710 | AGTGACTACATACGGAGCAAAA | 57.469 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
3901 | 4856 | 5.086104 | AGTGACTACATACGGAGCAAAAT | 57.914 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
3902 | 4857 | 4.870426 | AGTGACTACATACGGAGCAAAATG | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
3903 | 4858 | 4.868171 | GTGACTACATACGGAGCAAAATGA | 59.132 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
3904 | 4859 | 5.005779 | GTGACTACATACGGAGCAAAATGAG | 59.994 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3905 | 4860 | 5.086104 | ACTACATACGGAGCAAAATGAGT | 57.914 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3906 | 4861 | 4.870426 | ACTACATACGGAGCAAAATGAGTG | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3907 | 4862 | 3.937814 | ACATACGGAGCAAAATGAGTGA | 58.062 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
3908 | 4863 | 4.323417 | ACATACGGAGCAAAATGAGTGAA | 58.677 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
3909 | 4864 | 4.943705 | ACATACGGAGCAAAATGAGTGAAT | 59.056 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3910 | 4865 | 5.065218 | ACATACGGAGCAAAATGAGTGAATC | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3911 | 4866 | 3.679389 | ACGGAGCAAAATGAGTGAATCT | 58.321 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
3912 | 4867 | 4.832248 | ACGGAGCAAAATGAGTGAATCTA | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
3913 | 4868 | 4.631813 | ACGGAGCAAAATGAGTGAATCTAC | 59.368 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
3914 | 4869 | 4.631377 | CGGAGCAAAATGAGTGAATCTACA | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
3915 | 4870 | 5.446473 | CGGAGCAAAATGAGTGAATCTACAC | 60.446 | 44.000 | 0.00 | 0.00 | 40.60 | 2.90 |
3956 | 4911 | 5.608676 | ACATCCGTATGTAGTAGTCATCG | 57.391 | 43.478 | 0.00 | 0.00 | 44.66 | 3.84 |
3957 | 4912 | 4.454847 | ACATCCGTATGTAGTAGTCATCGG | 59.545 | 45.833 | 0.00 | 0.00 | 44.66 | 4.18 |
3958 | 4913 | 4.341366 | TCCGTATGTAGTAGTCATCGGA | 57.659 | 45.455 | 0.00 | 0.00 | 39.74 | 4.55 |
3959 | 4914 | 4.707105 | TCCGTATGTAGTAGTCATCGGAA | 58.293 | 43.478 | 0.00 | 0.00 | 39.45 | 4.30 |
3960 | 4915 | 5.125356 | TCCGTATGTAGTAGTCATCGGAAA | 58.875 | 41.667 | 0.00 | 0.00 | 39.45 | 3.13 |
3961 | 4916 | 5.766670 | TCCGTATGTAGTAGTCATCGGAAAT | 59.233 | 40.000 | 0.00 | 0.00 | 39.45 | 2.17 |
3962 | 4917 | 5.856986 | CCGTATGTAGTAGTCATCGGAAATG | 59.143 | 44.000 | 0.00 | 0.00 | 37.75 | 2.32 |
3963 | 4918 | 6.436261 | CGTATGTAGTAGTCATCGGAAATGT | 58.564 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3964 | 4919 | 6.577800 | CGTATGTAGTAGTCATCGGAAATGTC | 59.422 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
3965 | 4920 | 6.716934 | ATGTAGTAGTCATCGGAAATGTCT | 57.283 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
3966 | 4921 | 7.818997 | ATGTAGTAGTCATCGGAAATGTCTA | 57.181 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3967 | 4922 | 7.260558 | TGTAGTAGTCATCGGAAATGTCTAG | 57.739 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3968 | 4923 | 7.052248 | TGTAGTAGTCATCGGAAATGTCTAGA | 58.948 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
3969 | 4924 | 7.555195 | TGTAGTAGTCATCGGAAATGTCTAGAA | 59.445 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
3970 | 4925 | 7.406031 | AGTAGTCATCGGAAATGTCTAGAAA | 57.594 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3971 | 4926 | 7.484975 | AGTAGTCATCGGAAATGTCTAGAAAG | 58.515 | 38.462 | 0.00 | 0.00 | 0.00 | 2.62 |
3972 | 4927 | 6.531503 | AGTCATCGGAAATGTCTAGAAAGA | 57.468 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
3989 | 4944 | 9.595823 | TCTAGAAAGACAAATATTTAGGAACGG | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
3990 | 4945 | 9.595823 | CTAGAAAGACAAATATTTAGGAACGGA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
3991 | 4946 | 8.494016 | AGAAAGACAAATATTTAGGAACGGAG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.63 |
3992 | 4947 | 7.553044 | AGAAAGACAAATATTTAGGAACGGAGG | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
3993 | 4948 | 5.681639 | AGACAAATATTTAGGAACGGAGGG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
3994 | 4949 | 5.427481 | AGACAAATATTTAGGAACGGAGGGA | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3995 | 4950 | 5.681639 | ACAAATATTTAGGAACGGAGGGAG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
3996 | 4951 | 5.191124 | ACAAATATTTAGGAACGGAGGGAGT | 59.809 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3997 | 4952 | 6.384886 | ACAAATATTTAGGAACGGAGGGAGTA | 59.615 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
3998 | 4953 | 6.416631 | AATATTTAGGAACGGAGGGAGTAC | 57.583 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
3999 | 4954 | 3.463048 | TTTAGGAACGGAGGGAGTACT | 57.537 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
4000 | 4955 | 3.463048 | TTAGGAACGGAGGGAGTACTT | 57.537 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
4001 | 4956 | 4.591321 | TTAGGAACGGAGGGAGTACTTA | 57.409 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
4002 | 4957 | 3.684408 | AGGAACGGAGGGAGTACTTAT | 57.316 | 47.619 | 0.00 | 0.00 | 0.00 | 1.73 |
4003 | 4958 | 3.564264 | AGGAACGGAGGGAGTACTTATC | 58.436 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
4004 | 4959 | 3.053095 | AGGAACGGAGGGAGTACTTATCA | 60.053 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
4005 | 4960 | 3.896272 | GGAACGGAGGGAGTACTTATCAT | 59.104 | 47.826 | 0.00 | 0.00 | 0.00 | 2.45 |
4006 | 4961 | 4.022155 | GGAACGGAGGGAGTACTTATCATC | 60.022 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
4007 | 4962 | 4.180377 | ACGGAGGGAGTACTTATCATCA | 57.820 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
4008 | 4963 | 4.543689 | ACGGAGGGAGTACTTATCATCAA | 58.456 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
4009 | 4964 | 4.960469 | ACGGAGGGAGTACTTATCATCAAA | 59.040 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
4010 | 4965 | 5.424252 | ACGGAGGGAGTACTTATCATCAAAA | 59.576 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
4011 | 4966 | 6.099845 | ACGGAGGGAGTACTTATCATCAAAAT | 59.900 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
4012 | 4967 | 7.289317 | ACGGAGGGAGTACTTATCATCAAAATA | 59.711 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
4013 | 4968 | 7.815068 | CGGAGGGAGTACTTATCATCAAAATAG | 59.185 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
4014 | 4969 | 8.871125 | GGAGGGAGTACTTATCATCAAAATAGA | 58.129 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
4079 | 5034 | 9.643693 | ACATCACTTTTTATCCATTTTGATGAC | 57.356 | 29.630 | 13.63 | 0.00 | 40.95 | 3.06 |
4080 | 5035 | 9.642327 | CATCACTTTTTATCCATTTTGATGACA | 57.358 | 29.630 | 0.00 | 0.00 | 40.95 | 3.58 |
4082 | 5037 | 9.695526 | TCACTTTTTATCCATTTTGATGACAAG | 57.304 | 29.630 | 0.00 | 0.00 | 37.32 | 3.16 |
4083 | 5038 | 9.480053 | CACTTTTTATCCATTTTGATGACAAGT | 57.520 | 29.630 | 0.00 | 0.00 | 33.86 | 3.16 |
4091 | 5046 | 9.865321 | ATCCATTTTGATGACAAGTATTTTCAG | 57.135 | 29.630 | 0.00 | 0.00 | 37.32 | 3.02 |
4092 | 5047 | 9.076781 | TCCATTTTGATGACAAGTATTTTCAGA | 57.923 | 29.630 | 0.00 | 0.00 | 37.32 | 3.27 |
4093 | 5048 | 9.865321 | CCATTTTGATGACAAGTATTTTCAGAT | 57.135 | 29.630 | 0.00 | 0.00 | 37.32 | 2.90 |
4095 | 5050 | 9.865321 | ATTTTGATGACAAGTATTTTCAGATGG | 57.135 | 29.630 | 0.00 | 0.00 | 37.32 | 3.51 |
4096 | 5051 | 8.634335 | TTTGATGACAAGTATTTTCAGATGGA | 57.366 | 30.769 | 0.00 | 0.00 | 37.32 | 3.41 |
4097 | 5052 | 7.854557 | TGATGACAAGTATTTTCAGATGGAG | 57.145 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4098 | 5053 | 6.825213 | TGATGACAAGTATTTTCAGATGGAGG | 59.175 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
4099 | 5054 | 5.500234 | TGACAAGTATTTTCAGATGGAGGG | 58.500 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4100 | 5055 | 5.250543 | TGACAAGTATTTTCAGATGGAGGGA | 59.749 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4101 | 5056 | 5.749462 | ACAAGTATTTTCAGATGGAGGGAG | 58.251 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4124 | 5079 | 9.574516 | GGAGTATATATTTTCCATTGTGAAGGT | 57.425 | 33.333 | 9.27 | 0.00 | 0.00 | 3.50 |
4217 | 5174 | 3.914094 | GCTGGTGCTCATGATGCA | 58.086 | 55.556 | 13.62 | 13.62 | 38.19 | 3.96 |
4284 | 5241 | 0.875908 | CAGTGTATCGCCGGGTCATG | 60.876 | 60.000 | 2.18 | 0.00 | 0.00 | 3.07 |
4290 | 5247 | 1.669049 | ATCGCCGGGTCATGTTACGA | 61.669 | 55.000 | 2.18 | 0.00 | 0.00 | 3.43 |
4310 | 5267 | 6.229561 | ACGAAAGAACTGCAGATTAGTTTC | 57.770 | 37.500 | 23.35 | 18.06 | 38.42 | 2.78 |
4311 | 5268 | 5.992217 | ACGAAAGAACTGCAGATTAGTTTCT | 59.008 | 36.000 | 23.35 | 14.70 | 38.42 | 2.52 |
4312 | 5269 | 7.152645 | ACGAAAGAACTGCAGATTAGTTTCTA | 58.847 | 34.615 | 23.35 | 0.00 | 38.42 | 2.10 |
4313 | 5270 | 7.116519 | ACGAAAGAACTGCAGATTAGTTTCTAC | 59.883 | 37.037 | 23.35 | 13.25 | 38.42 | 2.59 |
4323 | 5280 | 6.323225 | GCAGATTAGTTTCTACTACTACCCCA | 59.677 | 42.308 | 0.00 | 0.00 | 36.61 | 4.96 |
4324 | 5281 | 7.683945 | GCAGATTAGTTTCTACTACTACCCCAC | 60.684 | 44.444 | 0.00 | 0.00 | 36.61 | 4.61 |
4348 | 5305 | 7.220300 | CACGGTCAACACTAAGATCTGTAATAC | 59.780 | 40.741 | 0.00 | 0.00 | 0.00 | 1.89 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
19 | 20 | 9.705290 | AAAAACAAGTGACACTTTAAGATTTGT | 57.295 | 25.926 | 18.27 | 8.63 | 36.03 | 2.83 |
32 | 33 | 2.287909 | GCGGGCATAAAAACAAGTGACA | 60.288 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
33 | 34 | 2.324860 | GCGGGCATAAAAACAAGTGAC | 58.675 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
51 | 52 | 2.173382 | CGAGGGAAAAAGCACGCG | 59.827 | 61.111 | 3.53 | 3.53 | 0.00 | 6.01 |
59 | 60 | 2.025636 | AGGAAGAGGACGAGGGAAAA | 57.974 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
60 | 61 | 2.042706 | AGTAGGAAGAGGACGAGGGAAA | 59.957 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
61 | 62 | 1.639628 | AGTAGGAAGAGGACGAGGGAA | 59.360 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
62 | 63 | 1.296984 | AGTAGGAAGAGGACGAGGGA | 58.703 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
64 | 65 | 1.751924 | CCAAGTAGGAAGAGGACGAGG | 59.248 | 57.143 | 0.00 | 0.00 | 41.22 | 4.63 |
66 | 67 | 1.076677 | ACCCAAGTAGGAAGAGGACGA | 59.923 | 52.381 | 0.00 | 0.00 | 41.22 | 4.20 |
68 | 69 | 1.477295 | CGACCCAAGTAGGAAGAGGAC | 59.523 | 57.143 | 0.00 | 0.00 | 41.22 | 3.85 |
70 | 71 | 1.751924 | CTCGACCCAAGTAGGAAGAGG | 59.248 | 57.143 | 0.00 | 0.00 | 41.22 | 3.69 |
71 | 72 | 1.135333 | GCTCGACCCAAGTAGGAAGAG | 59.865 | 57.143 | 0.00 | 0.00 | 41.22 | 2.85 |
126 | 130 | 3.182263 | TCAACTGGTGGGTGGGGG | 61.182 | 66.667 | 0.00 | 0.00 | 32.53 | 5.40 |
127 | 131 | 1.131303 | TAGTCAACTGGTGGGTGGGG | 61.131 | 60.000 | 0.00 | 0.00 | 32.53 | 4.96 |
129 | 133 | 0.321653 | GCTAGTCAACTGGTGGGTGG | 60.322 | 60.000 | 0.00 | 0.00 | 32.53 | 4.61 |
168 | 172 | 1.630126 | AAGGATGGTCAGGCAGCGAT | 61.630 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
173 | 177 | 2.978156 | AAAAGAAGGATGGTCAGGCA | 57.022 | 45.000 | 0.00 | 0.00 | 0.00 | 4.75 |
177 | 181 | 3.204382 | GGGGGATAAAAGAAGGATGGTCA | 59.796 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
200 | 204 | 3.526534 | GTCGAAGAAGAAGAGAATGGGG | 58.473 | 50.000 | 0.00 | 0.00 | 39.69 | 4.96 |
201 | 205 | 3.182967 | CGTCGAAGAAGAAGAGAATGGG | 58.817 | 50.000 | 0.00 | 0.00 | 38.59 | 4.00 |
202 | 206 | 2.600867 | GCGTCGAAGAAGAAGAGAATGG | 59.399 | 50.000 | 1.37 | 0.00 | 38.59 | 3.16 |
203 | 207 | 2.600867 | GGCGTCGAAGAAGAAGAGAATG | 59.399 | 50.000 | 1.37 | 0.00 | 38.59 | 2.67 |
204 | 208 | 2.494073 | AGGCGTCGAAGAAGAAGAGAAT | 59.506 | 45.455 | 1.37 | 0.00 | 38.59 | 2.40 |
205 | 209 | 1.887198 | AGGCGTCGAAGAAGAAGAGAA | 59.113 | 47.619 | 1.37 | 0.00 | 38.59 | 2.87 |
206 | 210 | 1.200252 | CAGGCGTCGAAGAAGAAGAGA | 59.800 | 52.381 | 1.37 | 0.00 | 38.59 | 3.10 |
207 | 211 | 1.623359 | CAGGCGTCGAAGAAGAAGAG | 58.377 | 55.000 | 1.37 | 0.00 | 38.59 | 2.85 |
225 | 229 | 1.528076 | GTGTGTGTGGTGGGATGCA | 60.528 | 57.895 | 0.00 | 0.00 | 0.00 | 3.96 |
229 | 233 | 0.107410 | GTTCAGTGTGTGTGGTGGGA | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
238 | 242 | 1.472728 | GGACTTGACGGTTCAGTGTGT | 60.473 | 52.381 | 0.00 | 0.00 | 31.71 | 3.72 |
244 | 248 | 1.663739 | CTCGGGACTTGACGGTTCA | 59.336 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
258 | 262 | 2.047274 | TTGCGGGAGAAAGCTCGG | 60.047 | 61.111 | 0.00 | 0.00 | 42.25 | 4.63 |
281 | 285 | 3.755628 | GTCGCAGCTACCCGTGGA | 61.756 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
289 | 293 | 1.137086 | GAGGAGGAAATGTCGCAGCTA | 59.863 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
378 | 383 | 4.437820 | GTGCAAGTCGATTTTGTTGAAGAC | 59.562 | 41.667 | 12.38 | 0.00 | 0.00 | 3.01 |
405 | 410 | 9.100554 | TGATAACTAAAGTCACGTGAAAAAGAA | 57.899 | 29.630 | 21.95 | 9.53 | 0.00 | 2.52 |
475 | 483 | 0.321564 | TTCCCACACATGCTCCTTCG | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
483 | 491 | 9.019764 | GTTTATTTAAATCGATTCCCACACATG | 57.980 | 33.333 | 11.83 | 0.00 | 0.00 | 3.21 |
523 | 532 | 2.032054 | TGTGCTTTGAGAAAGTGCGAAG | 59.968 | 45.455 | 0.00 | 0.00 | 40.64 | 3.79 |
527 | 536 | 4.362279 | TGAAATGTGCTTTGAGAAAGTGC | 58.638 | 39.130 | 0.00 | 0.00 | 40.64 | 4.40 |
592 | 605 | 2.557056 | CGGAATTGATAGGCTCGGTCTA | 59.443 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
612 | 625 | 3.312697 | GGAGGGAAGCATTTTAAGCTACG | 59.687 | 47.826 | 0.00 | 0.00 | 42.53 | 3.51 |
613 | 626 | 3.312697 | CGGAGGGAAGCATTTTAAGCTAC | 59.687 | 47.826 | 0.00 | 0.00 | 42.53 | 3.58 |
617 | 630 | 5.890424 | TTTACGGAGGGAAGCATTTTAAG | 57.110 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
652 | 856 | 8.592998 | GTGTCACTACTTTAATGATCTAAACGG | 58.407 | 37.037 | 0.00 | 0.00 | 0.00 | 4.44 |
653 | 857 | 9.355215 | AGTGTCACTACTTTAATGATCTAAACG | 57.645 | 33.333 | 2.87 | 0.00 | 0.00 | 3.60 |
679 | 883 | 9.595823 | CGACTCCCTCTACAAAGAAATATAAAA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
681 | 885 | 8.529424 | TCGACTCCCTCTACAAAGAAATATAA | 57.471 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
682 | 886 | 8.577296 | CATCGACTCCCTCTACAAAGAAATATA | 58.423 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
683 | 887 | 7.437748 | CATCGACTCCCTCTACAAAGAAATAT | 58.562 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
684 | 888 | 6.183360 | CCATCGACTCCCTCTACAAAGAAATA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 1.40 |
685 | 889 | 5.395768 | CCATCGACTCCCTCTACAAAGAAAT | 60.396 | 44.000 | 0.00 | 0.00 | 0.00 | 2.17 |
687 | 891 | 3.447586 | CCATCGACTCCCTCTACAAAGAA | 59.552 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
689 | 893 | 2.761208 | ACCATCGACTCCCTCTACAAAG | 59.239 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
691 | 895 | 2.526888 | ACCATCGACTCCCTCTACAA | 57.473 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
692 | 896 | 2.496070 | CAAACCATCGACTCCCTCTACA | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
693 | 897 | 2.496470 | ACAAACCATCGACTCCCTCTAC | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
694 | 898 | 2.816411 | ACAAACCATCGACTCCCTCTA | 58.184 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
704 | 911 | 4.979197 | TCAAAAATCCGAAACAAACCATCG | 59.021 | 37.500 | 0.00 | 0.00 | 36.39 | 3.84 |
711 | 918 | 3.117046 | GCCGTTCAAAAATCCGAAACAA | 58.883 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
713 | 920 | 2.724174 | CTGCCGTTCAAAAATCCGAAAC | 59.276 | 45.455 | 0.00 | 0.00 | 0.00 | 2.78 |
714 | 921 | 2.619177 | TCTGCCGTTCAAAAATCCGAAA | 59.381 | 40.909 | 0.00 | 0.00 | 0.00 | 3.46 |
717 | 924 | 1.729149 | GCTCTGCCGTTCAAAAATCCG | 60.729 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
768 | 975 | 8.283291 | CGTCTATTTTCTGTTTTGCTTTCTACT | 58.717 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
769 | 976 | 7.534239 | CCGTCTATTTTCTGTTTTGCTTTCTAC | 59.466 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
770 | 977 | 7.442969 | TCCGTCTATTTTCTGTTTTGCTTTCTA | 59.557 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
867 | 1076 | 4.890581 | ACGCAATGGGGTGCTTTAATAATA | 59.109 | 37.500 | 1.62 | 0.00 | 42.62 | 0.98 |
883 | 1092 | 4.389992 | ACAGAGTACAATCAAGACGCAATG | 59.610 | 41.667 | 0.00 | 0.00 | 0.00 | 2.82 |
907 | 1116 | 8.019669 | TCGTAGTTTCAGAATTGAGTGTAGTAC | 58.980 | 37.037 | 0.00 | 0.00 | 34.15 | 2.73 |
1230 | 1450 | 1.764854 | GGCGGTGGGGATAGAGGAA | 60.765 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
1431 | 1652 | 6.863126 | AGAAAGCACAAAATTAAGAATGACGG | 59.137 | 34.615 | 0.00 | 0.00 | 0.00 | 4.79 |
1433 | 1654 | 7.061094 | CCGAGAAAGCACAAAATTAAGAATGAC | 59.939 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
1438 | 1659 | 6.262273 | AGAACCGAGAAAGCACAAAATTAAGA | 59.738 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
1463 | 1686 | 5.410924 | CAGTGAGAATTCTACATCGACCAA | 58.589 | 41.667 | 8.25 | 0.00 | 0.00 | 3.67 |
1479 | 1702 | 6.805215 | GGAAATCCAACCACACCAGTGAGA | 62.805 | 50.000 | 4.48 | 0.00 | 41.21 | 3.27 |
1594 | 1819 | 0.459237 | CAGTAAGGTCTCTGCGGCTG | 60.459 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1629 | 1860 | 1.289160 | TGGGCAGGACTAATGAAGCT | 58.711 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
1639 | 1870 | 1.087501 | GAATCGAACTTGGGCAGGAC | 58.912 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1692 | 1923 | 0.318699 | TCAACGAAGACACGGCAGAG | 60.319 | 55.000 | 0.00 | 0.00 | 37.61 | 3.35 |
1703 | 1934 | 6.953743 | CGTTATCTACACCAAAATCAACGAAG | 59.046 | 38.462 | 0.00 | 0.00 | 38.71 | 3.79 |
1707 | 1938 | 5.123344 | AGGCGTTATCTACACCAAAATCAAC | 59.877 | 40.000 | 0.00 | 0.00 | 30.99 | 3.18 |
1715 | 1950 | 2.730382 | TCAGAGGCGTTATCTACACCA | 58.270 | 47.619 | 0.00 | 0.00 | 30.99 | 4.17 |
1752 | 1987 | 0.395448 | AGTAGAGGGACGGCCAGTAC | 60.395 | 60.000 | 11.00 | 7.29 | 35.15 | 2.73 |
1856 | 2091 | 6.332735 | TGATACCAATCGAGGAGTATTCTG | 57.667 | 41.667 | 0.00 | 0.00 | 34.60 | 3.02 |
1858 | 2093 | 6.030849 | CGATGATACCAATCGAGGAGTATTC | 58.969 | 44.000 | 0.00 | 0.00 | 39.91 | 1.75 |
1860 | 2095 | 5.254115 | TCGATGATACCAATCGAGGAGTAT | 58.746 | 41.667 | 4.51 | 0.99 | 41.21 | 2.12 |
1868 | 2103 | 6.073058 | ACAATTCCAATCGATGATACCAATCG | 60.073 | 38.462 | 0.00 | 0.00 | 38.98 | 3.34 |
1869 | 2104 | 7.041167 | TGACAATTCCAATCGATGATACCAATC | 60.041 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
1870 | 2105 | 6.772233 | TGACAATTCCAATCGATGATACCAAT | 59.228 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
1871 | 2106 | 6.038161 | GTGACAATTCCAATCGATGATACCAA | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
1872 | 2107 | 5.527214 | GTGACAATTCCAATCGATGATACCA | 59.473 | 40.000 | 0.00 | 0.00 | 0.00 | 3.25 |
1873 | 2108 | 5.760253 | AGTGACAATTCCAATCGATGATACC | 59.240 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1874 | 2109 | 6.851222 | AGTGACAATTCCAATCGATGATAC | 57.149 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
1875 | 2110 | 7.441157 | GGTTAGTGACAATTCCAATCGATGATA | 59.559 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
1876 | 2111 | 6.260936 | GGTTAGTGACAATTCCAATCGATGAT | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 2.45 |
1977 | 2213 | 2.460757 | TTACCCCACTAAACGACAGC | 57.539 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1980 | 2216 | 6.205270 | TGAAGAAAATTACCCCACTAAACGAC | 59.795 | 38.462 | 0.00 | 0.00 | 0.00 | 4.34 |
2069 | 2305 | 6.203338 | GGAAATGAAACAATGTTTGTGCTCAT | 59.797 | 34.615 | 16.78 | 9.96 | 44.59 | 2.90 |
2070 | 2306 | 5.523188 | GGAAATGAAACAATGTTTGTGCTCA | 59.477 | 36.000 | 16.78 | 7.96 | 44.59 | 4.26 |
2086 | 2322 | 7.414429 | CGATGAAGACTTAGCAATGGAAATGAA | 60.414 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
2107 | 2343 | 9.232082 | CTCTGTGAAAAATTAAACAAACGATGA | 57.768 | 29.630 | 0.00 | 0.00 | 0.00 | 2.92 |
2127 | 2363 | 2.159421 | GCATGTTCCATGCTTCTCTGTG | 60.159 | 50.000 | 19.18 | 0.00 | 41.52 | 3.66 |
2152 | 2388 | 3.874383 | TTCTTCATGAACAACAGGGGA | 57.126 | 42.857 | 3.38 | 0.00 | 0.00 | 4.81 |
2245 | 2481 | 7.568199 | AAAGAATAATGCGCTACACCTAATT | 57.432 | 32.000 | 9.73 | 0.00 | 0.00 | 1.40 |
2285 | 2523 | 6.128145 | GCTTAAAGCCAACAAAAGAAACCAAA | 60.128 | 34.615 | 0.00 | 0.00 | 34.48 | 3.28 |
2371 | 2610 | 4.348656 | TCGTATGCACTACAATTCGAGTC | 58.651 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
2440 | 2679 | 8.945481 | TGCAATTCCAATCCAAATTATAACAG | 57.055 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
2604 | 2852 | 6.127253 | CCTTCAAATCCTTGGTGAAGCATAAT | 60.127 | 38.462 | 10.99 | 0.00 | 44.49 | 1.28 |
2659 | 2907 | 7.172875 | TCACGTAAATAAAAATGGAAACCGAGA | 59.827 | 33.333 | 0.00 | 0.00 | 0.00 | 4.04 |
2668 | 2916 | 9.893305 | AAGTTCTCTTCACGTAAATAAAAATGG | 57.107 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
2697 | 2947 | 3.591196 | TGGCAACATTATTCCTTGCAC | 57.409 | 42.857 | 4.18 | 0.00 | 46.17 | 4.57 |
2730 | 2982 | 3.097877 | TGATCGTATGCTGGACATCAC | 57.902 | 47.619 | 0.00 | 0.00 | 40.38 | 3.06 |
2740 | 2992 | 9.284594 | GATTTAGAGAGATAGTTGATCGTATGC | 57.715 | 37.037 | 0.00 | 0.00 | 39.80 | 3.14 |
2766 | 3604 | 6.765989 | TCCGATTCACCTATTTTGTTATCAGG | 59.234 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
2823 | 3662 | 3.891366 | ACAGACCAAAATTTCCCAGACAG | 59.109 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
2824 | 3663 | 3.909732 | ACAGACCAAAATTTCCCAGACA | 58.090 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
2825 | 3664 | 5.070685 | ACTACAGACCAAAATTTCCCAGAC | 58.929 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2896 | 3736 | 2.680339 | GACACAATAGGAGAAAGCAGCC | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2904 | 3744 | 5.428253 | GCCTGTTTATGACACAATAGGAGA | 58.572 | 41.667 | 13.46 | 0.00 | 34.06 | 3.71 |
2992 | 3832 | 6.716934 | TTGACCAAAAATACTTGCAGGTAA | 57.283 | 33.333 | 13.14 | 0.00 | 0.00 | 2.85 |
3009 | 3849 | 7.649533 | AATGAAGAGATATGCATTTTGACCA | 57.350 | 32.000 | 3.54 | 0.00 | 0.00 | 4.02 |
3022 | 3862 | 7.361457 | AGAACGTGGGAATAATGAAGAGATA | 57.639 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
3033 | 3873 | 2.901192 | TGAAGTGGAGAACGTGGGAATA | 59.099 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
3037 | 3877 | 0.393077 | ACTGAAGTGGAGAACGTGGG | 59.607 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3045 | 3885 | 6.808008 | ACAATAACAATGACTGAAGTGGAG | 57.192 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
3076 | 3916 | 7.719633 | GGCTGGAATAAAATCAAGGTGAGTATA | 59.280 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
3077 | 3917 | 6.547510 | GGCTGGAATAAAATCAAGGTGAGTAT | 59.452 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
3079 | 3919 | 4.706962 | GGCTGGAATAAAATCAAGGTGAGT | 59.293 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
3080 | 3920 | 4.952335 | AGGCTGGAATAAAATCAAGGTGAG | 59.048 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3082 | 3922 | 4.201950 | CGAGGCTGGAATAAAATCAAGGTG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
3083 | 3923 | 3.947834 | CGAGGCTGGAATAAAATCAAGGT | 59.052 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
3084 | 3924 | 3.243201 | GCGAGGCTGGAATAAAATCAAGG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 3.61 |
3164 | 4004 | 1.885887 | TGTTGGCAGGGAGATTTTTCG | 59.114 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
3165 | 4005 | 5.360714 | TCATATGTTGGCAGGGAGATTTTTC | 59.639 | 40.000 | 1.90 | 0.00 | 0.00 | 2.29 |
3230 | 4070 | 7.415877 | GGTTGAACAACACATACCAAGTAAACT | 60.416 | 37.037 | 17.43 | 0.00 | 42.85 | 2.66 |
3231 | 4071 | 6.693978 | GGTTGAACAACACATACCAAGTAAAC | 59.306 | 38.462 | 17.43 | 0.00 | 42.85 | 2.01 |
3233 | 4073 | 5.299782 | GGGTTGAACAACACATACCAAGTAA | 59.700 | 40.000 | 17.43 | 0.00 | 43.90 | 2.24 |
3234 | 4074 | 4.822896 | GGGTTGAACAACACATACCAAGTA | 59.177 | 41.667 | 17.43 | 0.00 | 43.90 | 2.24 |
3235 | 4075 | 3.634910 | GGGTTGAACAACACATACCAAGT | 59.365 | 43.478 | 17.43 | 0.00 | 43.90 | 3.16 |
3236 | 4076 | 3.005367 | GGGGTTGAACAACACATACCAAG | 59.995 | 47.826 | 19.26 | 0.00 | 46.17 | 3.61 |
3239 | 4079 | 2.556622 | CAGGGGTTGAACAACACATACC | 59.443 | 50.000 | 19.26 | 10.61 | 46.17 | 2.73 |
3240 | 4080 | 2.556622 | CCAGGGGTTGAACAACACATAC | 59.443 | 50.000 | 19.26 | 4.79 | 46.17 | 2.39 |
3288 | 4129 | 5.805486 | GTCGAATTTGTGAGTACTGCAGATA | 59.195 | 40.000 | 23.35 | 6.31 | 0.00 | 1.98 |
3373 | 4214 | 4.090090 | TCCTCATAGCCTAGCAATACTCC | 58.910 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
3433 | 4274 | 2.749682 | CCAGCACCTGTGGCTACA | 59.250 | 61.111 | 1.86 | 1.86 | 40.23 | 2.74 |
3508 | 4350 | 5.163513 | CCAAGTTGTTCTAATGTGGAATGC | 58.836 | 41.667 | 1.45 | 0.00 | 0.00 | 3.56 |
3688 | 4643 | 1.659794 | GCCGGAACAAACTGCATGT | 59.340 | 52.632 | 5.05 | 0.00 | 0.00 | 3.21 |
3740 | 4695 | 0.389817 | TCAAGAATGTCTCGGTGGCG | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3742 | 4697 | 3.599343 | TCATTCAAGAATGTCTCGGTGG | 58.401 | 45.455 | 19.10 | 0.00 | 46.15 | 4.61 |
3790 | 4745 | 4.683320 | CAGTGAATGCGATGACGAGATATT | 59.317 | 41.667 | 0.00 | 0.00 | 42.66 | 1.28 |
3793 | 4748 | 2.467838 | CAGTGAATGCGATGACGAGAT | 58.532 | 47.619 | 0.00 | 0.00 | 42.66 | 2.75 |
3817 | 4772 | 0.388294 | GTATTTCCGGACGGAGGGAG | 59.612 | 60.000 | 13.64 | 0.00 | 46.06 | 4.30 |
3818 | 4773 | 0.032813 | AGTATTTCCGGACGGAGGGA | 60.033 | 55.000 | 13.64 | 4.95 | 46.06 | 4.20 |
3819 | 4774 | 0.388294 | GAGTATTTCCGGACGGAGGG | 59.612 | 60.000 | 13.64 | 0.00 | 46.06 | 4.30 |
3820 | 4775 | 0.388294 | GGAGTATTTCCGGACGGAGG | 59.612 | 60.000 | 13.64 | 0.00 | 46.06 | 4.30 |
3821 | 4776 | 3.961576 | GGAGTATTTCCGGACGGAG | 57.038 | 57.895 | 13.64 | 0.00 | 46.06 | 4.63 |
3829 | 4784 | 2.117051 | AGGAACGGAGGGAGTATTTCC | 58.883 | 52.381 | 0.00 | 0.00 | 46.00 | 3.13 |
3830 | 4785 | 5.349061 | TTTAGGAACGGAGGGAGTATTTC | 57.651 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
3831 | 4786 | 5.970501 | ATTTAGGAACGGAGGGAGTATTT | 57.029 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
3832 | 4787 | 6.141790 | AGTATTTAGGAACGGAGGGAGTATT | 58.858 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3833 | 4788 | 5.713807 | AGTATTTAGGAACGGAGGGAGTAT | 58.286 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
3834 | 4789 | 5.134725 | AGTATTTAGGAACGGAGGGAGTA | 57.865 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
3835 | 4790 | 3.991683 | AGTATTTAGGAACGGAGGGAGT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
3836 | 4791 | 4.161754 | ACAAGTATTTAGGAACGGAGGGAG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3837 | 4792 | 4.098894 | ACAAGTATTTAGGAACGGAGGGA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
3838 | 4793 | 4.161754 | AGACAAGTATTTAGGAACGGAGGG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3839 | 4794 | 5.340439 | AGACAAGTATTTAGGAACGGAGG | 57.660 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
3840 | 4795 | 7.668525 | AAAAGACAAGTATTTAGGAACGGAG | 57.331 | 36.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3841 | 4796 | 9.211485 | CTAAAAAGACAAGTATTTAGGAACGGA | 57.789 | 33.333 | 0.00 | 0.00 | 33.69 | 4.69 |
3851 | 4806 | 9.476202 | GTTGAAATGCCTAAAAAGACAAGTATT | 57.524 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
3852 | 4807 | 8.637986 | TGTTGAAATGCCTAAAAAGACAAGTAT | 58.362 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
3853 | 4808 | 8.001881 | TGTTGAAATGCCTAAAAAGACAAGTA | 57.998 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
3854 | 4809 | 6.872920 | TGTTGAAATGCCTAAAAAGACAAGT | 58.127 | 32.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3855 | 4810 | 7.492344 | ACTTGTTGAAATGCCTAAAAAGACAAG | 59.508 | 33.333 | 0.00 | 0.00 | 43.36 | 3.16 |
3856 | 4811 | 7.277539 | CACTTGTTGAAATGCCTAAAAAGACAA | 59.722 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
3857 | 4812 | 6.756074 | CACTTGTTGAAATGCCTAAAAAGACA | 59.244 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
3858 | 4813 | 6.978080 | TCACTTGTTGAAATGCCTAAAAAGAC | 59.022 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
3859 | 4814 | 6.978080 | GTCACTTGTTGAAATGCCTAAAAAGA | 59.022 | 34.615 | 0.00 | 0.00 | 35.39 | 2.52 |
3860 | 4815 | 6.980397 | AGTCACTTGTTGAAATGCCTAAAAAG | 59.020 | 34.615 | 0.00 | 0.00 | 35.39 | 2.27 |
3861 | 4816 | 6.872920 | AGTCACTTGTTGAAATGCCTAAAAA | 58.127 | 32.000 | 0.00 | 0.00 | 35.39 | 1.94 |
3862 | 4817 | 6.463995 | AGTCACTTGTTGAAATGCCTAAAA | 57.536 | 33.333 | 0.00 | 0.00 | 35.39 | 1.52 |
3863 | 4818 | 6.544197 | TGTAGTCACTTGTTGAAATGCCTAAA | 59.456 | 34.615 | 0.00 | 0.00 | 35.39 | 1.85 |
3864 | 4819 | 6.058833 | TGTAGTCACTTGTTGAAATGCCTAA | 58.941 | 36.000 | 0.00 | 0.00 | 35.39 | 2.69 |
3865 | 4820 | 5.616270 | TGTAGTCACTTGTTGAAATGCCTA | 58.384 | 37.500 | 0.00 | 0.00 | 35.39 | 3.93 |
3866 | 4821 | 4.460263 | TGTAGTCACTTGTTGAAATGCCT | 58.540 | 39.130 | 0.00 | 0.00 | 35.39 | 4.75 |
3867 | 4822 | 4.829064 | TGTAGTCACTTGTTGAAATGCC | 57.171 | 40.909 | 0.00 | 0.00 | 35.39 | 4.40 |
3868 | 4823 | 6.015504 | CGTATGTAGTCACTTGTTGAAATGC | 58.984 | 40.000 | 0.00 | 0.00 | 35.39 | 3.56 |
3869 | 4824 | 6.367695 | TCCGTATGTAGTCACTTGTTGAAATG | 59.632 | 38.462 | 0.00 | 0.00 | 35.39 | 2.32 |
3870 | 4825 | 6.460781 | TCCGTATGTAGTCACTTGTTGAAAT | 58.539 | 36.000 | 0.00 | 0.00 | 35.39 | 2.17 |
3871 | 4826 | 5.845103 | TCCGTATGTAGTCACTTGTTGAAA | 58.155 | 37.500 | 0.00 | 0.00 | 35.39 | 2.69 |
3872 | 4827 | 5.456548 | TCCGTATGTAGTCACTTGTTGAA | 57.543 | 39.130 | 0.00 | 0.00 | 35.39 | 2.69 |
3873 | 4828 | 4.617530 | GCTCCGTATGTAGTCACTTGTTGA | 60.618 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
3874 | 4829 | 3.612860 | GCTCCGTATGTAGTCACTTGTTG | 59.387 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
3875 | 4830 | 3.257375 | TGCTCCGTATGTAGTCACTTGTT | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
3876 | 4831 | 2.823747 | TGCTCCGTATGTAGTCACTTGT | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
3877 | 4832 | 3.503827 | TGCTCCGTATGTAGTCACTTG | 57.496 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
3878 | 4833 | 4.530710 | TTTGCTCCGTATGTAGTCACTT | 57.469 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
3879 | 4834 | 4.530710 | TTTTGCTCCGTATGTAGTCACT | 57.469 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
3880 | 4835 | 4.868171 | TCATTTTGCTCCGTATGTAGTCAC | 59.132 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
3881 | 4836 | 5.079689 | TCATTTTGCTCCGTATGTAGTCA | 57.920 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3882 | 4837 | 5.005779 | CACTCATTTTGCTCCGTATGTAGTC | 59.994 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3883 | 4838 | 4.870426 | CACTCATTTTGCTCCGTATGTAGT | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
3884 | 4839 | 5.109210 | TCACTCATTTTGCTCCGTATGTAG | 58.891 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
3885 | 4840 | 5.079689 | TCACTCATTTTGCTCCGTATGTA | 57.920 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
3886 | 4841 | 3.937814 | TCACTCATTTTGCTCCGTATGT | 58.062 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
3887 | 4842 | 4.944962 | TTCACTCATTTTGCTCCGTATG | 57.055 | 40.909 | 0.00 | 0.00 | 0.00 | 2.39 |
3888 | 4843 | 5.431765 | AGATTCACTCATTTTGCTCCGTAT | 58.568 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
3889 | 4844 | 4.832248 | AGATTCACTCATTTTGCTCCGTA | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
3890 | 4845 | 3.679389 | AGATTCACTCATTTTGCTCCGT | 58.321 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
3891 | 4846 | 4.631377 | TGTAGATTCACTCATTTTGCTCCG | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
3892 | 4847 | 5.645497 | AGTGTAGATTCACTCATTTTGCTCC | 59.355 | 40.000 | 0.00 | 0.00 | 44.07 | 4.70 |
3893 | 4848 | 6.734104 | AGTGTAGATTCACTCATTTTGCTC | 57.266 | 37.500 | 0.00 | 0.00 | 44.07 | 4.26 |
3894 | 4849 | 7.516198 | AAAGTGTAGATTCACTCATTTTGCT | 57.484 | 32.000 | 0.00 | 0.00 | 46.25 | 3.91 |
3895 | 4850 | 9.677567 | TTTAAAGTGTAGATTCACTCATTTTGC | 57.322 | 29.630 | 0.00 | 0.00 | 46.25 | 3.68 |
3932 | 4887 | 6.315642 | CCGATGACTACTACATACGGATGTAT | 59.684 | 42.308 | 20.64 | 13.02 | 45.42 | 2.29 |
3933 | 4888 | 5.640783 | CCGATGACTACTACATACGGATGTA | 59.359 | 44.000 | 19.32 | 19.32 | 44.77 | 2.29 |
3935 | 4890 | 4.694037 | TCCGATGACTACTACATACGGATG | 59.306 | 45.833 | 5.94 | 5.94 | 39.65 | 3.51 |
3936 | 4891 | 4.903054 | TCCGATGACTACTACATACGGAT | 58.097 | 43.478 | 0.00 | 0.00 | 39.65 | 4.18 |
3937 | 4892 | 4.341366 | TCCGATGACTACTACATACGGA | 57.659 | 45.455 | 0.00 | 0.00 | 40.81 | 4.69 |
3938 | 4893 | 5.428496 | TTTCCGATGACTACTACATACGG | 57.572 | 43.478 | 0.00 | 0.00 | 38.47 | 4.02 |
3939 | 4894 | 6.436261 | ACATTTCCGATGACTACTACATACG | 58.564 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3940 | 4895 | 7.649973 | AGACATTTCCGATGACTACTACATAC | 58.350 | 38.462 | 0.00 | 0.00 | 0.00 | 2.39 |
3941 | 4896 | 7.818997 | AGACATTTCCGATGACTACTACATA | 57.181 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3942 | 4897 | 6.716934 | AGACATTTCCGATGACTACTACAT | 57.283 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
3943 | 4898 | 7.052248 | TCTAGACATTTCCGATGACTACTACA | 58.948 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
3944 | 4899 | 7.493743 | TCTAGACATTTCCGATGACTACTAC | 57.506 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
3945 | 4900 | 8.515695 | TTTCTAGACATTTCCGATGACTACTA | 57.484 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
3946 | 4901 | 7.339721 | TCTTTCTAGACATTTCCGATGACTACT | 59.660 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
3947 | 4902 | 7.481642 | TCTTTCTAGACATTTCCGATGACTAC | 58.518 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
3948 | 4903 | 7.640597 | TCTTTCTAGACATTTCCGATGACTA | 57.359 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3949 | 4904 | 6.531503 | TCTTTCTAGACATTTCCGATGACT | 57.468 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
3963 | 4918 | 9.595823 | CCGTTCCTAAATATTTGTCTTTCTAGA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
3964 | 4919 | 9.595823 | TCCGTTCCTAAATATTTGTCTTTCTAG | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
3965 | 4920 | 9.595823 | CTCCGTTCCTAAATATTTGTCTTTCTA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.10 |
3966 | 4921 | 7.553044 | CCTCCGTTCCTAAATATTTGTCTTTCT | 59.447 | 37.037 | 11.05 | 0.00 | 0.00 | 2.52 |
3967 | 4922 | 7.201705 | CCCTCCGTTCCTAAATATTTGTCTTTC | 60.202 | 40.741 | 11.05 | 0.00 | 0.00 | 2.62 |
3968 | 4923 | 6.602009 | CCCTCCGTTCCTAAATATTTGTCTTT | 59.398 | 38.462 | 11.05 | 0.00 | 0.00 | 2.52 |
3969 | 4924 | 6.069847 | TCCCTCCGTTCCTAAATATTTGTCTT | 60.070 | 38.462 | 11.05 | 0.00 | 0.00 | 3.01 |
3970 | 4925 | 5.427481 | TCCCTCCGTTCCTAAATATTTGTCT | 59.573 | 40.000 | 11.05 | 0.00 | 0.00 | 3.41 |
3971 | 4926 | 5.677567 | TCCCTCCGTTCCTAAATATTTGTC | 58.322 | 41.667 | 11.05 | 0.00 | 0.00 | 3.18 |
3972 | 4927 | 5.191124 | ACTCCCTCCGTTCCTAAATATTTGT | 59.809 | 40.000 | 11.05 | 0.00 | 0.00 | 2.83 |
3973 | 4928 | 5.681639 | ACTCCCTCCGTTCCTAAATATTTG | 58.318 | 41.667 | 11.05 | 1.40 | 0.00 | 2.32 |
3974 | 4929 | 5.970501 | ACTCCCTCCGTTCCTAAATATTT | 57.029 | 39.130 | 5.89 | 5.89 | 0.00 | 1.40 |
3975 | 4930 | 6.141790 | AGTACTCCCTCCGTTCCTAAATATT | 58.858 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3976 | 4931 | 5.713807 | AGTACTCCCTCCGTTCCTAAATAT | 58.286 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
3977 | 4932 | 5.134725 | AGTACTCCCTCCGTTCCTAAATA | 57.865 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
3978 | 4933 | 3.991683 | AGTACTCCCTCCGTTCCTAAAT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
3979 | 4934 | 3.463048 | AGTACTCCCTCCGTTCCTAAA | 57.537 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
3980 | 4935 | 3.463048 | AAGTACTCCCTCCGTTCCTAA | 57.537 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
3981 | 4936 | 4.166725 | TGATAAGTACTCCCTCCGTTCCTA | 59.833 | 45.833 | 0.00 | 0.00 | 0.00 | 2.94 |
3982 | 4937 | 3.053095 | TGATAAGTACTCCCTCCGTTCCT | 60.053 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
3983 | 4938 | 3.294214 | TGATAAGTACTCCCTCCGTTCC | 58.706 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
3984 | 4939 | 4.583489 | TGATGATAAGTACTCCCTCCGTTC | 59.417 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
3985 | 4940 | 4.543689 | TGATGATAAGTACTCCCTCCGTT | 58.456 | 43.478 | 0.00 | 0.00 | 0.00 | 4.44 |
3986 | 4941 | 4.180377 | TGATGATAAGTACTCCCTCCGT | 57.820 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
3987 | 4942 | 5.531122 | TTTGATGATAAGTACTCCCTCCG | 57.469 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
3988 | 4943 | 8.871125 | TCTATTTTGATGATAAGTACTCCCTCC | 58.129 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
4053 | 5008 | 9.643693 | GTCATCAAAATGGATAAAAAGTGATGT | 57.356 | 29.630 | 9.42 | 0.00 | 41.09 | 3.06 |
4054 | 5009 | 9.642327 | TGTCATCAAAATGGATAAAAAGTGATG | 57.358 | 29.630 | 0.00 | 0.00 | 41.46 | 3.07 |
4056 | 5011 | 9.695526 | CTTGTCATCAAAATGGATAAAAAGTGA | 57.304 | 29.630 | 0.00 | 0.00 | 33.42 | 3.41 |
4057 | 5012 | 9.480053 | ACTTGTCATCAAAATGGATAAAAAGTG | 57.520 | 29.630 | 0.00 | 0.00 | 33.42 | 3.16 |
4065 | 5020 | 9.865321 | CTGAAAATACTTGTCATCAAAATGGAT | 57.135 | 29.630 | 0.00 | 0.00 | 33.42 | 3.41 |
4066 | 5021 | 9.076781 | TCTGAAAATACTTGTCATCAAAATGGA | 57.923 | 29.630 | 0.00 | 0.00 | 33.42 | 3.41 |
4067 | 5022 | 9.865321 | ATCTGAAAATACTTGTCATCAAAATGG | 57.135 | 29.630 | 0.00 | 0.00 | 33.42 | 3.16 |
4069 | 5024 | 9.865321 | CCATCTGAAAATACTTGTCATCAAAAT | 57.135 | 29.630 | 0.00 | 0.00 | 32.87 | 1.82 |
4070 | 5025 | 9.076781 | TCCATCTGAAAATACTTGTCATCAAAA | 57.923 | 29.630 | 0.00 | 0.00 | 32.87 | 2.44 |
4071 | 5026 | 8.634335 | TCCATCTGAAAATACTTGTCATCAAA | 57.366 | 30.769 | 0.00 | 0.00 | 32.87 | 2.69 |
4072 | 5027 | 7.337689 | CCTCCATCTGAAAATACTTGTCATCAA | 59.662 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
4073 | 5028 | 6.825213 | CCTCCATCTGAAAATACTTGTCATCA | 59.175 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
4074 | 5029 | 6.261826 | CCCTCCATCTGAAAATACTTGTCATC | 59.738 | 42.308 | 0.00 | 0.00 | 0.00 | 2.92 |
4075 | 5030 | 6.069440 | TCCCTCCATCTGAAAATACTTGTCAT | 60.069 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
4076 | 5031 | 5.250543 | TCCCTCCATCTGAAAATACTTGTCA | 59.749 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
4077 | 5032 | 5.745227 | TCCCTCCATCTGAAAATACTTGTC | 58.255 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
4078 | 5033 | 5.251700 | ACTCCCTCCATCTGAAAATACTTGT | 59.748 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4079 | 5034 | 5.749462 | ACTCCCTCCATCTGAAAATACTTG | 58.251 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
4080 | 5035 | 7.698163 | ATACTCCCTCCATCTGAAAATACTT | 57.302 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4081 | 5036 | 8.980832 | ATATACTCCCTCCATCTGAAAATACT | 57.019 | 34.615 | 0.00 | 0.00 | 0.00 | 2.12 |
4087 | 5042 | 8.826765 | GGAAAATATATACTCCCTCCATCTGAA | 58.173 | 37.037 | 2.73 | 0.00 | 0.00 | 3.02 |
4088 | 5043 | 7.961431 | TGGAAAATATATACTCCCTCCATCTGA | 59.039 | 37.037 | 9.49 | 0.00 | 0.00 | 3.27 |
4089 | 5044 | 8.150827 | TGGAAAATATATACTCCCTCCATCTG | 57.849 | 38.462 | 9.49 | 0.00 | 0.00 | 2.90 |
4090 | 5045 | 8.940012 | ATGGAAAATATATACTCCCTCCATCT | 57.060 | 34.615 | 9.49 | 0.00 | 37.82 | 2.90 |
4091 | 5046 | 9.401058 | CAATGGAAAATATATACTCCCTCCATC | 57.599 | 37.037 | 11.31 | 0.00 | 40.67 | 3.51 |
4092 | 5047 | 8.904963 | ACAATGGAAAATATATACTCCCTCCAT | 58.095 | 33.333 | 9.49 | 0.00 | 42.79 | 3.41 |
4093 | 5048 | 8.163408 | CACAATGGAAAATATATACTCCCTCCA | 58.837 | 37.037 | 9.49 | 0.00 | 36.23 | 3.86 |
4094 | 5049 | 8.383175 | TCACAATGGAAAATATATACTCCCTCC | 58.617 | 37.037 | 9.49 | 0.00 | 0.00 | 4.30 |
4095 | 5050 | 9.793259 | TTCACAATGGAAAATATATACTCCCTC | 57.207 | 33.333 | 9.49 | 0.00 | 0.00 | 4.30 |
4096 | 5051 | 9.799106 | CTTCACAATGGAAAATATATACTCCCT | 57.201 | 33.333 | 9.49 | 0.00 | 0.00 | 4.20 |
4097 | 5052 | 9.014297 | CCTTCACAATGGAAAATATATACTCCC | 57.986 | 37.037 | 9.49 | 0.36 | 0.00 | 4.30 |
4098 | 5053 | 9.574516 | ACCTTCACAATGGAAAATATATACTCC | 57.425 | 33.333 | 6.19 | 6.19 | 0.00 | 3.85 |
4124 | 5079 | 4.651503 | TGGGTGCAAAGTCTCCATTTTTAA | 59.348 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
4125 | 5080 | 4.219115 | TGGGTGCAAAGTCTCCATTTTTA | 58.781 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
4266 | 5223 | 1.327690 | ACATGACCCGGCGATACACT | 61.328 | 55.000 | 9.30 | 0.00 | 0.00 | 3.55 |
4267 | 5224 | 0.461339 | AACATGACCCGGCGATACAC | 60.461 | 55.000 | 9.30 | 0.00 | 0.00 | 2.90 |
4284 | 5241 | 6.707599 | ACTAATCTGCAGTTCTTTCGTAAC | 57.292 | 37.500 | 14.67 | 0.00 | 0.00 | 2.50 |
4290 | 5247 | 9.425577 | GTAGTAGAAACTAATCTGCAGTTCTTT | 57.574 | 33.333 | 17.14 | 10.53 | 39.90 | 2.52 |
4323 | 5280 | 5.717078 | TTACAGATCTTAGTGTTGACCGT | 57.283 | 39.130 | 0.00 | 0.00 | 0.00 | 4.83 |
4324 | 5281 | 6.696148 | GGTATTACAGATCTTAGTGTTGACCG | 59.304 | 42.308 | 0.00 | 0.00 | 0.00 | 4.79 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.