AutoCloner

Multiple sequence alignment - TraesCS3B01G426900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3B01G426900	chr3B	100.000	5963	0	0	1	5963	665345719	665339757	0.000000e+00	11012.0
1	TraesCS3B01G426900	chr3B	89.480	865	76	14	1	861	561549646	561548793	0.000000e+00	1079.0
2	TraesCS3B01G426900	chr3B	82.834	501	40	24	4499	4958	674394876	674394381	2.000000e-109	407.0
3	TraesCS3B01G426900	chr3B	81.212	330	47	7	3175	3504	378722981	378722667	9.920000e-63	252.0
4	TraesCS3B01G426900	chr3B	84.255	235	26	4	4062	4285	101254269	101254035	1.010000e-52	219.0
5	TraesCS3B01G426900	chr3B	80.788	203	33	4	5556	5755	258283902	258283703	2.880000e-33	154.0
6	TraesCS3B01G426900	chr3B	85.593	118	11	5	3791	3905	101254576	101254462	1.050000e-22	119.0
7	TraesCS3B01G426900	chr3B	82.143	140	21	4	5626	5763	152229568	152229431	3.780000e-22	117.0
8	TraesCS3B01G426900	chr3B	77.838	185	37	4	4964	5146	736471664	736471846	1.760000e-20	111.0
9	TraesCS3B01G426900	chr3B	97.727	44	1	0	4288	4331	816278680	816278637	6.410000e-10	76.8
10	TraesCS3B01G426900	chr3B	95.455	44	2	0	5202	5245	429281732	429281689	2.980000e-08	71.3
11	TraesCS3B01G426900	chr3B	92.308	52	1	3	4288	4338	748785873	748785922	2.980000e-08	71.3
12	TraesCS3B01G426900	chr3D	85.417	3120	247	116	887	3905	503997210	503994198	0.000000e+00	3049.0
13	TraesCS3B01G426900	chr3D	78.653	698	126	16	5265	5958	277219530	277218852	5.480000e-120	442.0
14	TraesCS3B01G426900	chr3D	77.353	680	133	16	5265	5938	30925563	30926227	3.370000e-102	383.0
15	TraesCS3B01G426900	chr3D	89.496	238	15	6	4439	4668	503993754	503993519	5.850000e-75	292.0
16	TraesCS3B01G426900	chr3D	89.908	218	16	5	4681	4896	503993475	503993262	5.890000e-70	276.0
17	TraesCS3B01G426900	chr3D	85.892	241	23	9	4051	4283	503994085	503993848	4.620000e-61	246.0
18	TraesCS3B01G426900	chr3D	75.773	388	73	10	5138	5507	330696848	330696464	6.140000e-40	176.0
19	TraesCS3B01G426900	chr3D	95.918	49	0	2	4284	4331	113456586	113456633	1.780000e-10	78.7
20	TraesCS3B01G426900	chr3D	76.761	142	28	5	4958	5098	544417652	544417789	2.300000e-09	75.0
21	TraesCS3B01G426900	chr3A	89.875	1037	49	25	2894	3905	642210465	642209460	0.000000e+00	1282.0
22	TraesCS3B01G426900	chr3A	82.812	896	93	31	2017	2884	642211411	642210549	0.000000e+00	745.0
23	TraesCS3B01G426900	chr3A	83.656	826	71	39	1155	1937	642212385	642211581	0.000000e+00	719.0
24	TraesCS3B01G426900	chr3A	87.683	479	46	9	3432	3905	648015105	648014635	4.060000e-151	545.0
25	TraesCS3B01G426900	chr3A	83.607	488	37	12	4510	4958	642208968	642208485	9.240000e-113	418.0
26	TraesCS3B01G426900	chr3A	84.859	284	19	14	4674	4940	648013845	648013569	1.270000e-66	265.0
27	TraesCS3B01G426900	chr3A	83.007	306	19	14	870	1156	642212707	642212416	4.620000e-61	246.0
28	TraesCS3B01G426900	chr3A	85.477	241	26	6	4439	4676	648014106	648013872	5.970000e-60	243.0
29	TraesCS3B01G426900	chr3A	82.510	263	29	10	4030	4283	648014454	648014200	1.300000e-51	215.0
30	TraesCS3B01G426900	chr3A	95.050	101	5	0	4166	4266	642209203	642209103	6.190000e-35	159.0
31	TraesCS3B01G426900	chr3A	72.671	322	79	8	5625	5940	1124904	1125222	1.370000e-16	99.0
32	TraesCS3B01G426900	chr1B	92.618	867	48	9	1	862	42233535	42232680	0.000000e+00	1232.0
33	TraesCS3B01G426900	chr1B	92.061	718	49	7	151	862	368418442	368417727	0.000000e+00	1003.0
34	TraesCS3B01G426900	chr1B	76.812	414	59	24	3345	3730	538916205	538916609	1.310000e-46	198.0
35	TraesCS3B01G426900	chr1B	75.604	414	64	24	3345	3730	117568409	117568813	2.860000e-38	171.0
36	TraesCS3B01G426900	chr4B	92.520	869	47	10	1	862	621505410	621504553	0.000000e+00	1229.0
37	TraesCS3B01G426900	chr4B	91.917	866	54	10	1	862	595286855	595287708	0.000000e+00	1197.0
38	TraesCS3B01G426900	chr4B	91.696	867	49	10	1	862	545442889	545443737	0.000000e+00	1181.0
39	TraesCS3B01G426900	chr4B	76.703	455	67	25	3310	3734	421858372	421857927	3.620000e-52	217.0
40	TraesCS3B01G426900	chr4B	97.826	46	0	1	4287	4331	173551147	173551192	1.780000e-10	78.7
41	TraesCS3B01G426900	chr2B	89.600	875	75	10	1	862	541902161	541903032	0.000000e+00	1098.0
42	TraesCS3B01G426900	chr2B	89.130	874	75	14	1	862	359038783	359039648	0.000000e+00	1070.0
43	TraesCS3B01G426900	chr2B	82.251	231	26	11	4062	4278	357882481	357882710	1.020000e-42	185.0
44	TraesCS3B01G426900	chr2B	83.099	71	10	2	5054	5122	110681692	110681762	4.990000e-06	63.9
45	TraesCS3B01G426900	chr6B	88.453	866	82	13	1	862	461899524	461900375	0.000000e+00	1029.0
46	TraesCS3B01G426900	chr5B	87.872	874	83	16	1	862	492960583	492959721	0.000000e+00	1005.0
47	TraesCS3B01G426900	chr5B	86.114	857	85	19	4	850	389160114	389159282	0.000000e+00	893.0
48	TraesCS3B01G426900	chr5B	84.100	239	27	4	4058	4285	125266887	125266649	2.800000e-53	220.0
49	TraesCS3B01G426900	chr5B	85.593	118	11	5	3791	3905	125267183	125267069	1.050000e-22	119.0
50	TraesCS3B01G426900	chr7D	85.369	868	112	14	1	862	590076214	590077072	0.000000e+00	885.0
51	TraesCS3B01G426900	chr7D	77.363	455	91	8	5506	5958	254301713	254301269	5.930000e-65	259.0
52	TraesCS3B01G426900	chr7D	81.726	197	31	4	5743	5938	386921447	386921639	6.190000e-35	159.0
53	TraesCS3B01G426900	chr7A	78.273	695	91	36	3070	3734	629778819	629778155	5.600000e-105	392.0
54	TraesCS3B01G426900	chr7A	77.778	477	92	9	5484	5958	272922287	272921823	1.270000e-71	281.0
55	TraesCS3B01G426900	chr7A	83.983	231	25	10	4058	4280	671185640	671185866	1.680000e-50	211.0
56	TraesCS3B01G426900	chr4A	77.596	674	120	20	5294	5958	12459437	12460088	4.360000e-101	379.0
57	TraesCS3B01G426900	chr5D	78.745	494	87	9	5301	5780	551892567	551893056	1.250000e-81	315.0
58	TraesCS3B01G426900	chr5D	77.605	451	83	13	5063	5495	509560166	509559716	2.130000e-64	257.0
59	TraesCS3B01G426900	chr5D	84.348	230	26	8	4058	4280	116654330	116654104	3.620000e-52	217.0
60	TraesCS3B01G426900	chr5D	84.615	117	14	4	5825	5940	551893150	551893263	4.880000e-21	113.0
61	TraesCS3B01G426900	chr5D	97.727	44	1	0	4288	4331	62140679	62140722	6.410000e-10	76.8
62	TraesCS3B01G426900	chr7B	77.419	465	94	7	5496	5958	231624351	231623896	3.540000e-67	267.0
63	TraesCS3B01G426900	chr7B	81.515	330	46	5	3175	3504	141074994	141074680	2.130000e-64	257.0
64	TraesCS3B01G426900	chr7B	79.121	364	60	11	5605	5957	382240753	382241111	2.780000e-58	237.0
65	TraesCS3B01G426900	chr7B	97.778	45	0	1	4288	4331	430307370	430307414	6.410000e-10	76.8
66	TraesCS3B01G426900	chr6D	77.925	453	57	27	3310	3734	16118199	16118636	5.970000e-60	243.0
67	TraesCS3B01G426900	chr6D	80.795	151	26	3	5617	5766	289516646	289516794	1.360000e-21	115.0
68	TraesCS3B01G426900	chr2D	82.946	258	38	4	5540	5795	422755956	422756209	1.670000e-55	228.0
69	TraesCS3B01G426900	chr2D	97.727	44	0	1	4288	4330	54580806	54580849	2.300000e-09	75.0
70	TraesCS3B01G426900	chrUn	84.255	235	26	4	4062	4285	480874615	480874849	1.010000e-52	219.0
71	TraesCS3B01G426900	chr1A	77.218	417	58	24	3346	3734	176410882	176411289	6.060000e-50	209.0
72	TraesCS3B01G426900	chr1A	82.759	174	23	3	5622	5795	586660770	586660936	1.340000e-31	148.0
73	TraesCS3B01G426900	chr1A	84.112	107	17	0	5139	5245	550647461	550647567	2.940000e-18	104.0
74	TraesCS3B01G426900	chr1D	78.906	256	39	6	5547	5793	349748288	349748537	6.190000e-35	159.0
75	TraesCS3B01G426900	chr2A	75.000	268	54	12	5618	5880	616071964	616071705	1.760000e-20	111.0
76	TraesCS3B01G426900	chr5A	81.679	131	20	4	5626	5754	24200715	24200587	8.170000e-19	106.0
77	TraesCS3B01G426900	chr5A	97.778	45	0	1	4288	4331	602651563	602651519	6.410000e-10	76.8
78	TraesCS3B01G426900	chr4D	94.118	51	2	1	4288	4337	275755076	275755126	6.410000e-10	76.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3B01G426900	chr3B	665339757	665345719	5962	True	11012.000000	11012	100.00000	1	5963	1	chr3B.!!$R6	5962
1	TraesCS3B01G426900	chr3B	561548793	561549646	853	True	1079.000000	1079	89.48000	1	861	1	chr3B.!!$R5	860
2	TraesCS3B01G426900	chr3D	503993262	503997210	3948	True	965.750000	3049	87.67825	887	4896	4	chr3D.!!$R3	4009
3	TraesCS3B01G426900	chr3D	277218852	277219530	678	True	442.000000	442	78.65300	5265	5958	1	chr3D.!!$R1	693
4	TraesCS3B01G426900	chr3D	30925563	30926227	664	False	383.000000	383	77.35300	5265	5938	1	chr3D.!!$F1	673
5	TraesCS3B01G426900	chr3A	642208485	642212707	4222	True	594.833333	1282	86.33450	870	4958	6	chr3A.!!$R1	4088
6	TraesCS3B01G426900	chr3A	648013569	648015105	1536	True	317.000000	545	85.13225	3432	4940	4	chr3A.!!$R2	1508
7	TraesCS3B01G426900	chr1B	42232680	42233535	855	True	1232.000000	1232	92.61800	1	862	1	chr1B.!!$R1	861
8	TraesCS3B01G426900	chr1B	368417727	368418442	715	True	1003.000000	1003	92.06100	151	862	1	chr1B.!!$R2	711
9	TraesCS3B01G426900	chr4B	621504553	621505410	857	True	1229.000000	1229	92.52000	1	862	1	chr4B.!!$R2	861
10	TraesCS3B01G426900	chr4B	595286855	595287708	853	False	1197.000000	1197	91.91700	1	862	1	chr4B.!!$F3	861
11	TraesCS3B01G426900	chr4B	545442889	545443737	848	False	1181.000000	1181	91.69600	1	862	1	chr4B.!!$F2	861
12	TraesCS3B01G426900	chr2B	541902161	541903032	871	False	1098.000000	1098	89.60000	1	862	1	chr2B.!!$F4	861
13	TraesCS3B01G426900	chr2B	359038783	359039648	865	False	1070.000000	1070	89.13000	1	862	1	chr2B.!!$F3	861
14	TraesCS3B01G426900	chr6B	461899524	461900375	851	False	1029.000000	1029	88.45300	1	862	1	chr6B.!!$F1	861
15	TraesCS3B01G426900	chr5B	492959721	492960583	862	True	1005.000000	1005	87.87200	1	862	1	chr5B.!!$R2	861
16	TraesCS3B01G426900	chr5B	389159282	389160114	832	True	893.000000	893	86.11400	4	850	1	chr5B.!!$R1	846
17	TraesCS3B01G426900	chr7D	590076214	590077072	858	False	885.000000	885	85.36900	1	862	1	chr7D.!!$F2	861
18	TraesCS3B01G426900	chr7A	629778155	629778819	664	True	392.000000	392	78.27300	3070	3734	1	chr7A.!!$R2	664
19	TraesCS3B01G426900	chr4A	12459437	12460088	651	False	379.000000	379	77.59600	5294	5958	1	chr4A.!!$F1	664
20	TraesCS3B01G426900	chr5D	551892567	551893263	696	False	214.000000	315	81.68000	5301	5940	2	chr5D.!!$F2	639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
868	948	0.322546	GATGGGTCGAAAGTTGGCCT	60.323	55.0	3.32	0.00	0.00	5.19	F
1798	2003	0.038159	CTCGCTCCTGTTTTCGTCCT	60.038	55.0	0.00	0.00	0.00	3.85	F
2004	2304	0.038890	TCAATGGCCGGTTCCATCAA	59.961	50.0	13.35	3.29	45.64	2.57	F
2745	3085	0.037046	CACTTACGGCCGTTAACCCT	60.037	55.0	38.94	12.44	0.00	4.34	F
4083	4629	0.246635	TTCAGAACCTCGGTAGCTGC	59.753	55.0	0.00	0.00	33.52	5.25	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2042	2359	0.033504	TCTCCTTCGTGACACTTGCC	59.966	55.0	3.68	0.00	0.00	4.52	R
2645	2979	0.099436	GTCGGCAATCATCAACAGCC	59.901	55.0	0.00	0.00	41.86	4.85	R
3948	4439	0.037160	TTTCAACCCCGCCTTCTACC	59.963	55.0	0.00	0.00	0.00	3.18	R
4321	4879	0.036294	GAACTGTGTGCTACTCCCCC	60.036	60.0	0.00	0.00	0.00	5.40	R
5046	5672	0.036010	GCCGGATATGGGATGTCTGG	60.036	60.0	5.05	4.27	46.39	3.86	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
554	569	2.548295	GGCGGGTGCGAAAACAAGA	61.548	57.895	0.00	0.00	44.10	3.02
669	727	4.459089	GGCGTCAGGGAGGAGTGC	62.459	72.222	0.00	0.00	0.00	4.40
690	748	3.502211	GCGGAAGAGTGAAGAAAAATGGA	59.498	43.478	0.00	0.00	0.00	3.41
691	749	4.023193	GCGGAAGAGTGAAGAAAAATGGAA	60.023	41.667	0.00	0.00	0.00	3.53
692	750	5.507315	GCGGAAGAGTGAAGAAAAATGGAAA	60.507	40.000	0.00	0.00	0.00	3.13
693	751	6.503524	CGGAAGAGTGAAGAAAAATGGAAAA	58.496	36.000	0.00	0.00	0.00	2.29
694	752	6.638468	CGGAAGAGTGAAGAAAAATGGAAAAG	59.362	38.462	0.00	0.00	0.00	2.27
695	753	7.468631	CGGAAGAGTGAAGAAAAATGGAAAAGA	60.469	37.037	0.00	0.00	0.00	2.52
696	754	8.197439	GGAAGAGTGAAGAAAAATGGAAAAGAA	58.803	33.333	0.00	0.00	0.00	2.52
697	755	9.755804	GAAGAGTGAAGAAAAATGGAAAAGAAT	57.244	29.630	0.00	0.00	0.00	2.40
698	756	9.538508	AAGAGTGAAGAAAAATGGAAAAGAATG	57.461	29.630	0.00	0.00	0.00	2.67
699	757	8.917088	AGAGTGAAGAAAAATGGAAAAGAATGA	58.083	29.630	0.00	0.00	0.00	2.57
712	770	0.620556	AGAATGAAGTGGGATGCGGT	59.379	50.000	0.00	0.00	0.00	5.68
719	777	4.770362	TGGGATGCGGTCGGAGGA	62.770	66.667	0.00	0.00	0.00	3.71
777	857	4.393778	GACGGGGGTCAGGGGAGA	62.394	72.222	0.00	0.00	0.00	3.71
831	911	1.448922	CCGTTTCACCCCAAAAGCGA	61.449	55.000	0.00	0.00	0.00	4.93
862	942	2.125673	CGCGGATGGGTCGAAAGT	60.126	61.111	0.00	0.00	0.00	2.66
863	943	1.740296	CGCGGATGGGTCGAAAGTT	60.740	57.895	0.00	0.00	0.00	2.66
864	944	1.794222	GCGGATGGGTCGAAAGTTG	59.206	57.895	0.00	0.00	0.00	3.16
865	945	1.644786	GCGGATGGGTCGAAAGTTGG	61.645	60.000	0.00	0.00	0.00	3.77
866	946	1.644786	CGGATGGGTCGAAAGTTGGC	61.645	60.000	0.00	0.00	0.00	4.52
867	947	1.313091	GGATGGGTCGAAAGTTGGCC	61.313	60.000	0.00	0.00	0.00	5.36
868	948	0.322546	GATGGGTCGAAAGTTGGCCT	60.323	55.000	3.32	0.00	0.00	5.19
872	952	1.235281	GGTCGAAAGTTGGCCTGACC	61.235	60.000	3.32	6.31	39.10	4.02
1201	1351	4.457496	GCGCCTCCTGCTGTGCTA	62.457	66.667	0.00	0.00	38.05	3.49
1203	1353	2.103042	CGCCTCCTGCTGTGCTAAC	61.103	63.158	0.00	0.00	38.05	2.34
1204	1354	2.103042	GCCTCCTGCTGTGCTAACG	61.103	63.158	0.00	0.00	36.87	3.18
1205	1355	2.103042	CCTCCTGCTGTGCTAACGC	61.103	63.158	0.00	0.00	0.00	4.84
1206	1356	1.374631	CTCCTGCTGTGCTAACGCA	60.375	57.895	0.00	0.00	45.60	5.24
1216	1371	4.430765	CTAACGCACCGCCGGTCT	62.431	66.667	5.41	0.00	31.02	3.85
1238	1393	4.752879	CCATGAACCGCCCGACGT	62.753	66.667	0.00	0.00	41.42	4.34
1240	1395	4.446413	ATGAACCGCCCGACGTCC	62.446	66.667	10.58	0.00	41.42	4.79
1379	1534	1.915769	GTGCTCTCCCACTCCCAGT	60.916	63.158	0.00	0.00	33.02	4.00
1478	1636	4.079850	CCTGCGAGTCCAGCTGCT	62.080	66.667	8.66	0.00	35.28	4.24
1670	1848	0.681564	ACCTCCTCGTACCTGCTCTG	60.682	60.000	0.00	0.00	0.00	3.35
1717	1922	0.874175	CCTTTCTCGTGTGTCGTGCA	60.874	55.000	0.00	0.00	40.80	4.57
1732	1937	1.304879	TGCACCCATTGGTTAGGCC	60.305	57.895	0.00	0.00	44.75	5.19
1734	1939	1.752694	CACCCATTGGTTAGGCCGG	60.753	63.158	0.00	0.00	44.75	6.13
1736	1941	2.833121	CCATTGGTTAGGCCGGCC	60.833	66.667	39.29	39.29	41.21	6.13
1737	1942	2.833121	CATTGGTTAGGCCGGCCC	60.833	66.667	41.72	26.48	41.21	5.80
1738	1943	3.343326	ATTGGTTAGGCCGGCCCA	61.343	61.111	41.72	28.47	41.21	5.36
1739	1944	3.655350	ATTGGTTAGGCCGGCCCAC	62.655	63.158	41.72	34.96	41.21	4.61
1792	1997	1.374758	CCTCGCTCGCTCCTGTTTT	60.375	57.895	0.00	0.00	0.00	2.43
1794	1999	1.678269	CTCGCTCGCTCCTGTTTTCG	61.678	60.000	0.00	0.00	0.00	3.46
1795	2000	2.022129	CGCTCGCTCCTGTTTTCGT	61.022	57.895	0.00	0.00	0.00	3.85
1797	2002	1.627550	GCTCGCTCCTGTTTTCGTCC	61.628	60.000	0.00	0.00	0.00	4.79
1798	2003	0.038159	CTCGCTCCTGTTTTCGTCCT	60.038	55.000	0.00	0.00	0.00	3.85
1800	2005	1.344942	CGCTCCTGTTTTCGTCCTCG	61.345	60.000	0.00	0.00	38.55	4.63
1803	2008	2.033194	CCTGTTTTCGTCCTCGCCC	61.033	63.158	0.00	0.00	36.96	6.13
1804	2009	2.356553	TGTTTTCGTCCTCGCCCG	60.357	61.111	0.00	0.00	36.96	6.13
1805	2010	2.356673	GTTTTCGTCCTCGCCCGT	60.357	61.111	0.00	0.00	36.96	5.28
1806	2011	2.356553	TTTTCGTCCTCGCCCGTG	60.357	61.111	0.00	0.00	36.96	4.94
1807	2012	2.858862	TTTTCGTCCTCGCCCGTGA	61.859	57.895	0.00	0.00	36.96	4.35
1808	2013	2.162338	TTTTCGTCCTCGCCCGTGAT	62.162	55.000	0.00	0.00	36.96	3.06
1809	2014	2.552585	TTTCGTCCTCGCCCGTGATC	62.553	60.000	0.00	0.00	36.96	2.92
1821	2026	1.149148	CCGTGATCGATCGAGCTCTA	58.851	55.000	30.86	11.21	39.71	2.43
1823	2028	1.795872	CGTGATCGATCGAGCTCTACT	59.204	52.381	30.86	9.88	39.71	2.57
1825	2030	2.095969	GTGATCGATCGAGCTCTACTGG	60.096	54.545	30.86	0.00	0.00	4.00
1826	2031	0.878416	ATCGATCGAGCTCTACTGGC	59.122	55.000	23.84	0.00	0.00	4.85
1827	2032	0.179043	TCGATCGAGCTCTACTGGCT	60.179	55.000	15.15	0.00	43.26	4.75
1828	2033	0.665835	CGATCGAGCTCTACTGGCTT	59.334	55.000	10.26	0.00	40.40	4.35
1829	2034	1.874231	CGATCGAGCTCTACTGGCTTA	59.126	52.381	10.26	0.00	40.40	3.09
1830	2035	2.095969	CGATCGAGCTCTACTGGCTTAG	60.096	54.545	10.26	0.00	40.40	2.18
1834	2039	2.452600	AGCTCTACTGGCTTAGCTCT	57.547	50.000	3.59	0.00	41.35	4.09
1835	2040	3.586470	AGCTCTACTGGCTTAGCTCTA	57.414	47.619	3.59	0.00	41.35	2.43
1836	2041	3.486383	AGCTCTACTGGCTTAGCTCTAG	58.514	50.000	3.59	3.31	41.35	2.43
1837	2042	2.030274	GCTCTACTGGCTTAGCTCTAGC	60.030	54.545	11.33	11.33	42.49	3.42
1851	2056	1.038130	TCTAGCTCGTGGGAAGCCTC	61.038	60.000	0.00	0.00	0.00	4.70
1854	2059	0.687757	AGCTCGTGGGAAGCCTCATA	60.688	55.000	0.00	0.00	0.00	2.15
1862	2067	2.373169	TGGGAAGCCTCATATGTGATCC	59.627	50.000	6.35	9.97	32.98	3.36
1925	2141	0.251354	ACGCCTCTAGTCTCACCGTA	59.749	55.000	0.00	0.00	0.00	4.02
1937	2153	9.926158	TCTAGTCTCACCGTACTTAGATAATAG	57.074	37.037	0.00	0.00	0.00	1.73
1940	2156	9.487790	AGTCTCACCGTACTTAGATAATAGTAC	57.512	37.037	0.00	0.00	41.98	2.73
1941	2157	9.487790	GTCTCACCGTACTTAGATAATAGTACT	57.512	37.037	0.00	0.00	42.80	2.73
1942	2158	9.486497	TCTCACCGTACTTAGATAATAGTACTG	57.514	37.037	5.39	0.00	42.80	2.74
1944	2160	7.935755	TCACCGTACTTAGATAATAGTACTGCT	59.064	37.037	5.39	0.00	42.80	4.24
1946	2162	7.935755	ACCGTACTTAGATAATAGTACTGCTCA	59.064	37.037	5.39	0.00	42.80	4.26
1947	2163	8.229137	CCGTACTTAGATAATAGTACTGCTCAC	58.771	40.741	5.39	0.00	42.80	3.51
1951	2167	7.935755	ACTTAGATAATAGTACTGCTCACCGTA	59.064	37.037	5.39	0.00	0.00	4.02
1952	2168	8.681486	TTAGATAATAGTACTGCTCACCGTAA	57.319	34.615	5.39	0.00	0.00	3.18
1953	2169	7.762588	AGATAATAGTACTGCTCACCGTAAT	57.237	36.000	5.39	0.00	0.00	1.89
1954	2170	8.179509	AGATAATAGTACTGCTCACCGTAATT	57.820	34.615	5.39	0.00	0.00	1.40
1955	2171	8.082852	AGATAATAGTACTGCTCACCGTAATTG	58.917	37.037	5.39	0.00	0.00	2.32
1956	2172	3.247006	AGTACTGCTCACCGTAATTGG	57.753	47.619	0.00	0.00	0.00	3.16
1957	2173	2.093658	AGTACTGCTCACCGTAATTGGG	60.094	50.000	0.00	0.00	0.00	4.12
1958	2174	0.676782	ACTGCTCACCGTAATTGGGC	60.677	55.000	0.00	0.00	41.22	5.36
1960	2176	2.562125	GCTCACCGTAATTGGGCAA	58.438	52.632	0.00	0.00	40.48	4.52
1962	2178	2.294074	GCTCACCGTAATTGGGCAATA	58.706	47.619	0.00	0.00	40.48	1.90
1963	2179	2.032924	GCTCACCGTAATTGGGCAATAC	59.967	50.000	0.00	0.00	40.48	1.89
1968	2268	3.139077	CCGTAATTGGGCAATACTCCTC	58.861	50.000	0.00	0.00	0.00	3.71
1971	2271	4.039973	CGTAATTGGGCAATACTCCTCCTA	59.960	45.833	0.00	0.00	0.00	2.94
1973	2273	4.713792	ATTGGGCAATACTCCTCCTAAG	57.286	45.455	0.00	0.00	0.00	2.18
1979	2279	4.321378	GGCAATACTCCTCCTAAGATCGAC	60.321	50.000	0.00	0.00	0.00	4.20
1992	2292	0.931005	GATCGACGAAGGTCAATGGC	59.069	55.000	0.00	0.00	43.61	4.40
1993	2293	0.462047	ATCGACGAAGGTCAATGGCC	60.462	55.000	0.00	0.00	43.61	5.36
1995	2295	2.046314	ACGAAGGTCAATGGCCGG	60.046	61.111	0.00	0.00	0.00	6.13
1999	2299	1.304134	AAGGTCAATGGCCGGTTCC	60.304	57.895	1.90	0.00	0.00	3.62
2003	2303	0.679640	GTCAATGGCCGGTTCCATCA	60.680	55.000	13.35	2.07	45.64	3.07
2004	2304	0.038890	TCAATGGCCGGTTCCATCAA	59.961	50.000	13.35	3.29	45.64	2.57
2005	2305	1.113788	CAATGGCCGGTTCCATCAAT	58.886	50.000	13.35	0.00	45.64	2.57
2008	2308	0.894141	TGGCCGGTTCCATCAATTTG	59.106	50.000	1.90	0.00	0.00	2.32
2009	2309	0.894835	GGCCGGTTCCATCAATTTGT	59.105	50.000	1.90	0.00	0.00	2.83
2010	2310	1.404047	GGCCGGTTCCATCAATTTGTG	60.404	52.381	1.90	0.00	0.00	3.33
2011	2311	1.994916	CCGGTTCCATCAATTTGTGC	58.005	50.000	0.00	0.00	0.00	4.57
2012	2312	1.545582	CCGGTTCCATCAATTTGTGCT	59.454	47.619	0.00	0.00	0.00	4.40
2013	2313	2.415893	CCGGTTCCATCAATTTGTGCTC	60.416	50.000	0.00	0.00	0.00	4.26
2014	2314	2.489329	CGGTTCCATCAATTTGTGCTCT	59.511	45.455	0.00	0.00	0.00	4.09
2015	2315	3.689161	CGGTTCCATCAATTTGTGCTCTA	59.311	43.478	0.00	0.00	0.00	2.43
2041	2358	2.159101	ATCTGTTGGGTGGCTGGCAT	62.159	55.000	7.33	0.00	0.00	4.40
2042	2359	2.601067	TGTTGGGTGGCTGGCATG	60.601	61.111	7.33	0.00	0.00	4.06
2043	2360	3.384532	GTTGGGTGGCTGGCATGG	61.385	66.667	7.33	0.00	0.00	3.66
2047	2364	3.766691	GGTGGCTGGCATGGCAAG	61.767	66.667	23.47	17.08	44.02	4.01
2048	2365	2.993264	GTGGCTGGCATGGCAAGT	60.993	61.111	23.47	0.00	44.02	3.16
2050	2367	2.993264	GGCTGGCATGGCAAGTGT	60.993	61.111	23.47	0.00	31.11	3.55
2051	2368	2.570181	GCTGGCATGGCAAGTGTC	59.430	61.111	23.47	6.42	31.11	3.67
2052	2369	2.270257	GCTGGCATGGCAAGTGTCA	61.270	57.895	23.47	0.00	31.11	3.58
2053	2370	1.582968	CTGGCATGGCAAGTGTCAC	59.417	57.895	23.47	0.00	29.57	3.67
2065	2382	1.080705	GTGTCACGAAGGAGACGGG	60.081	63.158	0.00	0.00	39.06	5.28
2066	2383	2.126031	GTCACGAAGGAGACGGGC	60.126	66.667	0.00	0.00	33.96	6.13
2075	2397	1.129058	AGGAGACGGGCGGAATAATT	58.871	50.000	0.00	0.00	0.00	1.40
2077	2399	1.602377	GGAGACGGGCGGAATAATTTG	59.398	52.381	0.00	0.00	0.00	2.32
2078	2400	1.002792	GAGACGGGCGGAATAATTTGC	60.003	52.381	0.00	0.00	0.00	3.68
2144	2471	8.047310	CCTGTCCTCCATTGTTAGTTAAGTTAT	58.953	37.037	0.00	0.00	0.00	1.89
2176	2503	8.461222	CACCTTATCTACTCATCTCATCTCATC	58.539	40.741	0.00	0.00	0.00	2.92
2177	2504	8.393259	ACCTTATCTACTCATCTCATCTCATCT	58.607	37.037	0.00	0.00	0.00	2.90
2178	2505	8.896744	CCTTATCTACTCATCTCATCTCATCTC	58.103	40.741	0.00	0.00	0.00	2.75
2179	2506	9.452287	CTTATCTACTCATCTCATCTCATCTCA	57.548	37.037	0.00	0.00	0.00	3.27
2180	2507	9.978336	TTATCTACTCATCTCATCTCATCTCAT	57.022	33.333	0.00	0.00	0.00	2.90
2224	2551	6.748333	ATCATTGACCCATTATTCTATGCG	57.252	37.500	0.00	0.00	0.00	4.73
2255	2582	5.989551	AAAAACTTCATTCATTGGCACAC	57.010	34.783	0.00	0.00	39.29	3.82
2335	2668	3.649277	GACGTGGCGTGATCCTGCT	62.649	63.158	0.00	0.00	41.37	4.24
2395	2728	1.608283	CCACCTCTCTTTTGTCCGACC	60.608	57.143	0.00	0.00	0.00	4.79
2404	2737	3.452990	TCTTTTGTCCGACCAGGCATATA	59.547	43.478	0.00	0.00	40.77	0.86
2405	2738	4.102524	TCTTTTGTCCGACCAGGCATATAT	59.897	41.667	0.00	0.00	40.77	0.86
2406	2739	5.305902	TCTTTTGTCCGACCAGGCATATATA	59.694	40.000	0.00	0.00	40.77	0.86
2407	2740	5.755409	TTTGTCCGACCAGGCATATATAT	57.245	39.130	0.00	0.00	40.77	0.86
2413	2746	4.402474	CCGACCAGGCATATATATCACTCA	59.598	45.833	0.00	0.00	0.00	3.41
2415	2748	5.807520	CGACCAGGCATATATATCACTCAAC	59.192	44.000	0.00	0.00	0.00	3.18
2436	2769	1.288419	TTACCAGCACATGTCACGCG	61.288	55.000	3.53	3.53	0.00	6.01
2455	2788	3.275338	GCGGCTCATAGCACCTGC	61.275	66.667	0.78	0.00	44.75	4.85
2468	2801	1.337071	GCACCTGCTCATCCATGATTG	59.663	52.381	0.00	0.00	36.02	2.67
2495	2828	3.670523	GCGAACAAAATTCAGAAGAAGCC	59.329	43.478	0.00	0.00	37.14	4.35
2501	2834	4.574599	AAATTCAGAAGAAGCCACACAC	57.425	40.909	0.00	0.00	37.14	3.82
2512	2845	1.283029	AGCCACACACAGATAAGGCAT	59.717	47.619	0.00	0.00	44.34	4.40
2513	2846	2.505407	AGCCACACACAGATAAGGCATA	59.495	45.455	0.00	0.00	44.34	3.14
2514	2847	2.874701	GCCACACACAGATAAGGCATAG	59.125	50.000	0.00	0.00	41.63	2.23
2515	2848	3.470709	CCACACACAGATAAGGCATAGG	58.529	50.000	0.00	0.00	0.00	2.57
2516	2849	2.874701	CACACACAGATAAGGCATAGGC	59.125	50.000	0.00	0.00	40.13	3.93
2517	2850	2.505407	ACACACAGATAAGGCATAGGCA	59.495	45.455	0.15	0.00	43.71	4.75
2518	2851	3.136763	CACACAGATAAGGCATAGGCAG	58.863	50.000	0.15	0.00	43.71	4.85
2519	2852	2.105477	ACACAGATAAGGCATAGGCAGG	59.895	50.000	0.15	0.00	43.71	4.85
2520	2853	2.105477	CACAGATAAGGCATAGGCAGGT	59.895	50.000	0.15	0.00	43.71	4.00
2521	2854	3.324846	CACAGATAAGGCATAGGCAGGTA	59.675	47.826	0.15	0.00	43.71	3.08
2522	2855	3.973973	ACAGATAAGGCATAGGCAGGTAA	59.026	43.478	0.15	0.00	43.71	2.85
2523	2856	4.412199	ACAGATAAGGCATAGGCAGGTAAA	59.588	41.667	0.15	0.00	43.71	2.01
2524	2857	5.073691	ACAGATAAGGCATAGGCAGGTAAAT	59.926	40.000	0.15	0.00	43.71	1.40
2525	2858	6.272324	ACAGATAAGGCATAGGCAGGTAAATA	59.728	38.462	0.15	0.00	43.71	1.40
2526	2859	7.037297	ACAGATAAGGCATAGGCAGGTAAATAT	60.037	37.037	0.15	0.00	43.71	1.28
2532	2865	5.989777	GGCATAGGCAGGTAAATATATACCG	59.010	44.000	0.15	0.00	42.61	4.02
2573	2906	3.614870	CGACCTGATGTGACTGTCATGAA	60.615	47.826	14.37	3.63	0.00	2.57
2576	2909	2.676839	CTGATGTGACTGTCATGAAGCC	59.323	50.000	14.37	0.28	0.00	4.35
2598	2931	5.445806	GCCAAATGTTAATGAATCAAACGGC	60.446	40.000	0.00	0.00	0.00	5.68
2674	3014	7.041030	TGTTGATGATTGCCGACTAAACTAAAA	60.041	33.333	0.00	0.00	0.00	1.52
2675	3015	7.072177	TGATGATTGCCGACTAAACTAAAAG	57.928	36.000	0.00	0.00	0.00	2.27
2676	3016	5.873179	TGATTGCCGACTAAACTAAAAGG	57.127	39.130	0.00	0.00	0.00	3.11
2677	3017	4.155280	TGATTGCCGACTAAACTAAAAGGC	59.845	41.667	0.00	0.00	43.05	4.35
2680	3020	3.072211	GCCGACTAAACTAAAAGGCAGT	58.928	45.455	0.00	0.00	42.37	4.40
2682	3022	4.092529	GCCGACTAAACTAAAAGGCAGTAC	59.907	45.833	0.00	0.00	42.37	2.73
2685	3025	5.924825	CGACTAAACTAAAAGGCAGTACAGT	59.075	40.000	0.00	0.00	0.00	3.55
2699	3039	3.686726	CAGTACAGTGGAGCAATTTCCTC	59.313	47.826	0.00	0.00	38.12	3.71
2733	3073	2.489971	TGAAAAGTCAGGCCACTTACG	58.510	47.619	5.01	0.00	35.45	3.18
2745	3085	0.037046	CACTTACGGCCGTTAACCCT	60.037	55.000	38.94	12.44	0.00	4.34
2754	3096	1.241315	CCGTTAACCCTGCCTTGTGG	61.241	60.000	0.00	0.00	0.00	4.17
2856	3202	5.447818	CGTACCTAACTTTACGTAGAGGTGG	60.448	48.000	13.63	10.47	40.48	4.61
2875	3221	1.134491	GGTTATTCTCCCAGTGACCCG	60.134	57.143	0.00	0.00	0.00	5.28
2961	3382	2.376808	GCTCTGTGTCAGTGCAGTAT	57.623	50.000	15.64	0.00	46.22	2.12
2998	3435	1.069022	TGGTAGTAGTTCGTGTCGTGC	60.069	52.381	0.00	0.00	0.00	5.34
3014	3451	3.834799	GCCCTGGGTCGACGTAGG	61.835	72.222	22.87	22.87	0.00	3.18
3058	3498	1.106944	TGGCGTCACAGTCACTCTCA	61.107	55.000	0.00	0.00	0.00	3.27
3072	3512	3.136763	CACTCTCACACAACTGCTGATT	58.863	45.455	0.00	0.00	0.00	2.57
3374	3825	0.411452	ACCTCTCCAGGAGCTTCTCA	59.589	55.000	12.26	0.00	43.65	3.27
3514	3968	2.493030	CCAGGTACAGTACGCCCG	59.507	66.667	4.58	0.00	0.00	6.13
3594	4075	5.356882	CAAATTTCAGTTTGGCTCGTCTA	57.643	39.130	0.00	0.00	35.86	2.59
3641	4122	2.814341	CAGCTGCAGCAGGACTCG	60.814	66.667	38.24	14.55	45.16	4.18
3756	4239	6.017440	TCGACTCCCAACTTGACTTAAAATTG	60.017	38.462	0.00	0.00	0.00	2.32
3778	4263	2.283298	CATTACTCCTTGCATGCTCGT	58.717	47.619	20.33	10.61	0.00	4.18
3789	4274	1.226974	ATGCTCGTTGTCGATCGGG	60.227	57.895	16.41	0.00	45.21	5.14
3803	4288	4.211794	GTCGATCGGGTGTTTAAACTGAAA	59.788	41.667	16.41	0.00	0.00	2.69
3804	4289	4.211794	TCGATCGGGTGTTTAAACTGAAAC	59.788	41.667	16.41	8.66	39.35	2.78
3817	4302	8.387354	GTTTAAACTGAAACCATTTTCCTGTTG	58.613	33.333	11.18	0.00	40.55	3.33
3905	4392	4.457949	CCCAACATGGACAAGGTAACTAAC	59.542	45.833	0.00	0.00	44.95	2.34
3907	4394	6.469410	CCAACATGGACAAGGTAACTAACTA	58.531	40.000	0.00	0.00	44.95	2.24
3909	4396	7.446013	CCAACATGGACAAGGTAACTAACTAAA	59.554	37.037	0.00	0.00	44.95	1.85
3930	4421	7.815068	ACTAAATCAGTTGAGCTGTAGTAAGTG	59.185	37.037	0.00	0.00	45.23	3.16
3948	4439	1.197721	GTGATGGGCACTTTCAGTTCG	59.802	52.381	0.00	0.00	44.27	3.95
3953	4486	1.001633	GGGCACTTTCAGTTCGGTAGA	59.998	52.381	0.00	0.00	0.00	2.59
3956	4489	2.737252	GCACTTTCAGTTCGGTAGAAGG	59.263	50.000	0.00	0.00	36.99	3.46
3958	4491	1.993370	CTTTCAGTTCGGTAGAAGGCG	59.007	52.381	0.00	0.00	36.99	5.52
3965	4498	2.652095	CGGTAGAAGGCGGGGTTGA	61.652	63.158	0.00	0.00	0.00	3.18
3968	4501	1.546099	GGTAGAAGGCGGGGTTGAAAA	60.546	52.381	0.00	0.00	0.00	2.29
3970	4503	1.545841	AGAAGGCGGGGTTGAAAATC	58.454	50.000	0.00	0.00	0.00	2.17
3977	4510	2.446435	CGGGGTTGAAAATCTCACCAT	58.554	47.619	0.00	0.00	32.21	3.55
3982	4515	5.394553	GGGGTTGAAAATCTCACCATGAATC	60.395	44.000	0.00	0.00	32.21	2.52
3986	4519	6.505044	TGAAAATCTCACCATGAATCACAG	57.495	37.500	0.00	0.00	0.00	3.66
4015	4548	7.071014	AGCTCGTACTCACTAAAGTACTAAC	57.929	40.000	11.25	0.00	46.18	2.34
4016	4549	6.652481	AGCTCGTACTCACTAAAGTACTAACA	59.348	38.462	11.25	0.00	46.18	2.41
4018	4551	7.360776	GCTCGTACTCACTAAAGTACTAACACT	60.361	40.741	11.25	0.00	46.18	3.55
4019	4552	7.800767	TCGTACTCACTAAAGTACTAACACTG	58.199	38.462	11.25	0.00	46.18	3.66
4021	4554	6.342338	ACTCACTAAAGTACTAACACTGGG	57.658	41.667	0.00	0.00	0.00	4.45
4028	4573	9.063615	ACTAAAGTACTAACACTGGGAATTTTG	57.936	33.333	0.00	0.00	0.00	2.44
4083	4629	0.246635	TTCAGAACCTCGGTAGCTGC	59.753	55.000	0.00	0.00	33.52	5.25
4095	4651	0.750850	GTAGCTGCCGATGGACCTAA	59.249	55.000	0.00	0.00	0.00	2.69
4133	4689	6.152492	TCAGAATTGCATTTGTGCACCTAATA	59.848	34.615	15.69	0.21	45.32	0.98
4136	4692	4.916983	TGCATTTGTGCACCTAATATCC	57.083	40.909	15.69	6.80	40.23	2.59
4137	4693	4.276642	TGCATTTGTGCACCTAATATCCA	58.723	39.130	15.69	8.97	40.23	3.41
4148	4704	5.740513	GCACCTAATATCCAGGAGAAGTCAC	60.741	48.000	9.72	0.00	36.61	3.67
4149	4706	5.363868	CACCTAATATCCAGGAGAAGTCACA	59.636	44.000	9.72	0.00	36.61	3.58
4152	4709	7.789831	ACCTAATATCCAGGAGAAGTCACATAA	59.210	37.037	9.72	0.00	36.61	1.90
4154	4711	9.650539	CTAATATCCAGGAGAAGTCACATAATG	57.349	37.037	0.00	0.00	0.00	1.90
4157	4714	4.019411	TCCAGGAGAAGTCACATAATGCAA	60.019	41.667	0.00	0.00	0.00	4.08
4160	4717	6.088824	CAGGAGAAGTCACATAATGCAAAAC	58.911	40.000	0.00	0.00	0.00	2.43
4161	4718	5.769662	AGGAGAAGTCACATAATGCAAAACA	59.230	36.000	0.00	0.00	0.00	2.83
4162	4719	5.858581	GGAGAAGTCACATAATGCAAAACAC	59.141	40.000	0.00	0.00	0.00	3.32
4164	4721	6.441274	AGAAGTCACATAATGCAAAACACTG	58.559	36.000	0.00	0.00	0.00	3.66
4270	4828	3.956199	CCAAATTGAGGTATGCTCCACAT	59.044	43.478	0.00	0.00	43.18	3.21
4283	4841	2.613977	GCTCCACATAGACACAGCTGTT	60.614	50.000	18.94	9.02	0.00	3.16
4284	4842	3.368427	GCTCCACATAGACACAGCTGTTA	60.368	47.826	18.94	8.03	0.00	2.41
4285	4843	4.428209	CTCCACATAGACACAGCTGTTAG	58.572	47.826	18.94	9.89	0.00	2.34
4286	4844	3.832490	TCCACATAGACACAGCTGTTAGT	59.168	43.478	18.94	13.61	0.00	2.24
4288	4846	5.125578	TCCACATAGACACAGCTGTTAGTAG	59.874	44.000	18.94	8.22	0.00	2.57
4289	4847	5.105716	CCACATAGACACAGCTGTTAGTAGT	60.106	44.000	18.94	11.92	0.00	2.73
4290	4848	6.390721	CACATAGACACAGCTGTTAGTAGTT	58.609	40.000	18.94	5.32	0.00	2.24
4291	4849	7.362660	CCACATAGACACAGCTGTTAGTAGTTA	60.363	40.741	18.94	7.28	0.00	2.24
4292	4850	7.698550	CACATAGACACAGCTGTTAGTAGTTAG	59.301	40.741	18.94	4.96	0.00	2.34
4293	4851	7.393796	ACATAGACACAGCTGTTAGTAGTTAGT	59.606	37.037	18.94	8.63	0.00	2.24
4294	4852	8.890718	CATAGACACAGCTGTTAGTAGTTAGTA	58.109	37.037	18.94	5.66	0.00	1.82
4295	4853	7.941431	AGACACAGCTGTTAGTAGTTAGTAT	57.059	36.000	18.94	2.85	0.00	2.12
4297	4855	9.458727	AGACACAGCTGTTAGTAGTTAGTATAA	57.541	33.333	18.94	0.00	0.00	0.98
4304	4862	9.310716	GCTGTTAGTAGTTAGTATAAAGTTGGG	57.689	37.037	0.00	0.00	0.00	4.12
4310	4868	9.490083	AGTAGTTAGTATAAAGTTGGGTCATCT	57.510	33.333	0.00	0.00	0.00	2.90
4322	4880	7.153217	AGTTGGGTCATCTATTTTAAAACGG	57.847	36.000	1.97	0.00	0.00	4.44
4323	4881	6.152154	AGTTGGGTCATCTATTTTAAAACGGG	59.848	38.462	1.97	0.00	0.00	5.28
4324	4882	4.951094	TGGGTCATCTATTTTAAAACGGGG	59.049	41.667	1.97	0.00	0.00	5.73
4325	4883	4.340097	GGGTCATCTATTTTAAAACGGGGG	59.660	45.833	1.97	0.00	0.00	5.40
4326	4884	5.195185	GGTCATCTATTTTAAAACGGGGGA	58.805	41.667	1.97	0.00	0.00	4.81
4327	4885	5.298527	GGTCATCTATTTTAAAACGGGGGAG	59.701	44.000	1.97	0.00	0.00	4.30
4358	4925	4.003648	AGTTCGAGGCCTTGTTAAAGATG	58.996	43.478	19.96	0.00	35.19	2.90
4361	4928	2.348666	CGAGGCCTTGTTAAAGATGTCG	59.651	50.000	6.77	0.00	35.19	4.35
4366	4933	4.915667	GGCCTTGTTAAAGATGTCGTTTTC	59.084	41.667	0.00	0.00	35.19	2.29
4367	4934	5.506649	GGCCTTGTTAAAGATGTCGTTTTCA	60.507	40.000	0.00	0.00	35.19	2.69
4368	4935	5.398416	GCCTTGTTAAAGATGTCGTTTTCAC	59.602	40.000	0.00	0.00	35.19	3.18
4369	4936	6.725246	CCTTGTTAAAGATGTCGTTTTCACT	58.275	36.000	0.00	0.00	35.19	3.41
4370	4937	7.519328	GCCTTGTTAAAGATGTCGTTTTCACTA	60.519	37.037	0.00	0.00	35.19	2.74
4371	4938	7.797123	CCTTGTTAAAGATGTCGTTTTCACTAC	59.203	37.037	0.00	0.00	35.19	2.73
4372	4939	6.869473	TGTTAAAGATGTCGTTTTCACTACG	58.131	36.000	0.00	0.00	40.23	3.51
4373	4940	4.385244	AAAGATGTCGTTTTCACTACGC	57.615	40.909	0.00	0.00	38.81	4.42
4374	4941	3.021269	AGATGTCGTTTTCACTACGCA	57.979	42.857	0.00	0.00	38.81	5.24
4375	4942	3.585862	AGATGTCGTTTTCACTACGCAT	58.414	40.909	0.00	0.00	38.81	4.73
4376	4943	3.612860	AGATGTCGTTTTCACTACGCATC	59.387	43.478	17.02	17.02	43.94	3.91
4377	4944	2.745102	TGTCGTTTTCACTACGCATCA	58.255	42.857	0.00	0.00	38.81	3.07
4378	4945	2.473609	TGTCGTTTTCACTACGCATCAC	59.526	45.455	0.00	0.00	38.81	3.06
4379	4946	2.473609	GTCGTTTTCACTACGCATCACA	59.526	45.455	0.00	0.00	38.81	3.58
4380	4947	2.473609	TCGTTTTCACTACGCATCACAC	59.526	45.455	0.00	0.00	38.81	3.82
4381	4948	2.717595	CGTTTTCACTACGCATCACACG	60.718	50.000	0.00	0.00	31.73	4.49
4383	4950	2.143008	TTCACTACGCATCACACGTT	57.857	45.000	0.00	0.00	41.93	3.99
4384	4951	1.414378	TCACTACGCATCACACGTTG	58.586	50.000	0.00	0.00	41.93	4.10
4385	4952	0.179250	CACTACGCATCACACGTTGC	60.179	55.000	0.00	0.00	41.93	4.17
4386	4953	1.289109	ACTACGCATCACACGTTGCC	61.289	55.000	4.45	0.00	41.93	4.52
4387	4954	1.005512	TACGCATCACACGTTGCCT	60.006	52.632	4.45	0.00	41.93	4.75
4388	4955	0.601576	TACGCATCACACGTTGCCTT	60.602	50.000	4.45	0.00	41.93	4.35
4389	4956	0.601576	ACGCATCACACGTTGCCTTA	60.602	50.000	4.45	0.00	41.93	2.69
4390	4957	0.515127	CGCATCACACGTTGCCTTAA	59.485	50.000	4.45	0.00	34.88	1.85
4391	4958	1.130373	CGCATCACACGTTGCCTTAAT	59.870	47.619	4.45	0.00	34.88	1.40
4392	4959	2.414029	CGCATCACACGTTGCCTTAATT	60.414	45.455	4.45	0.00	34.88	1.40
4393	4960	3.574614	GCATCACACGTTGCCTTAATTT	58.425	40.909	0.00	0.00	32.63	1.82
4394	4961	4.670478	CGCATCACACGTTGCCTTAATTTA	60.670	41.667	4.45	0.00	34.88	1.40
4395	4962	5.157781	GCATCACACGTTGCCTTAATTTAA	58.842	37.500	0.00	0.00	32.63	1.52
4396	4963	5.804979	GCATCACACGTTGCCTTAATTTAAT	59.195	36.000	0.00	0.00	32.63	1.40
4397	4964	6.310224	GCATCACACGTTGCCTTAATTTAATT	59.690	34.615	0.00	0.00	32.63	1.40
4398	4965	7.148656	GCATCACACGTTGCCTTAATTTAATTT	60.149	33.333	0.00	0.00	32.63	1.82
4399	4966	8.707839	CATCACACGTTGCCTTAATTTAATTTT	58.292	29.630	0.00	0.00	0.00	1.82
4400	4967	8.649973	TCACACGTTGCCTTAATTTAATTTTT	57.350	26.923	0.00	0.00	0.00	1.94
4437	5004	9.201127	ACGTTTCCTTAACTTCTTACATAAGTC	57.799	33.333	0.00	0.00	36.17	3.01
4535	5114	3.882888	TGCAGAAACTAAAACAGGACCAG	59.117	43.478	0.00	0.00	0.00	4.00
4663	5242	6.258068	CGGGAGATTAAGTTGTAAATGTCCTC	59.742	42.308	11.03	3.73	42.39	3.71
4670	5249	0.035820	TGTAAATGTCCTCCGCACCC	60.036	55.000	0.00	0.00	0.00	4.61
4671	5250	0.035820	GTAAATGTCCTCCGCACCCA	60.036	55.000	0.00	0.00	0.00	4.51
4679	5291	1.508088	CTCCGCACCCATTTCTTGC	59.492	57.895	0.00	0.00	0.00	4.01
4688	5300	4.379499	GCACCCATTTCTTGCTTGTACTAC	60.379	45.833	0.00	0.00	33.26	2.73
4689	5301	4.000988	ACCCATTTCTTGCTTGTACTACG	58.999	43.478	0.00	0.00	0.00	3.51
4727	5339	2.180276	TGGCTTCAAGACTAGGAGGTC	58.820	52.381	0.00	0.00	36.56	3.85
4805	5417	3.213249	CAAGTTGGATTGCTTCTGCTC	57.787	47.619	0.00	0.00	40.48	4.26
4859	5471	4.658901	GGGATCCCCTACTTTGAGTCATTA	59.341	45.833	21.42	0.00	41.34	1.90
4862	5474	5.531122	TCCCCTACTTTGAGTCATTATCG	57.469	43.478	0.00	0.00	0.00	2.92
4868	5480	6.418226	CCTACTTTGAGTCATTATCGTGCTAC	59.582	42.308	0.00	0.00	0.00	3.58
4874	5486	5.105513	TGAGTCATTATCGTGCTACCAAAGA	60.106	40.000	0.00	0.00	0.00	2.52
4926	5552	6.674861	TCCTGGAACAAAATATGTACCTCCTA	59.325	38.462	0.00	0.00	42.99	2.94
4937	5563	2.142756	GTACCTCCTACCTACTCCCCT	58.857	57.143	0.00	0.00	0.00	4.79
4942	5568	4.047655	ACCTCCTACCTACTCCCCTAAAAA	59.952	45.833	0.00	0.00	0.00	1.94
4970	5596	9.707957	AATTTGGACCCAATAATAACATCTACA	57.292	29.630	1.88	0.00	35.70	2.74
4971	5597	9.707957	ATTTGGACCCAATAATAACATCTACAA	57.292	29.630	1.88	0.00	35.70	2.41
4972	5598	9.707957	TTTGGACCCAATAATAACATCTACAAT	57.292	29.630	1.88	0.00	35.70	2.71
4973	5599	9.707957	TTGGACCCAATAATAACATCTACAATT	57.292	29.630	0.00	0.00	0.00	2.32
4974	5600	9.130661	TGGACCCAATAATAACATCTACAATTG	57.869	33.333	3.24	3.24	0.00	2.32
4975	5601	8.576442	GGACCCAATAATAACATCTACAATTGG	58.424	37.037	10.83	0.00	40.89	3.16
4976	5602	9.349713	GACCCAATAATAACATCTACAATTGGA	57.650	33.333	10.83	0.00	42.83	3.53
4977	5603	9.131791	ACCCAATAATAACATCTACAATTGGAC	57.868	33.333	10.83	0.00	42.83	4.02
4978	5604	8.576442	CCCAATAATAACATCTACAATTGGACC	58.424	37.037	10.83	0.00	42.83	4.46
4979	5605	8.576442	CCAATAATAACATCTACAATTGGACCC	58.424	37.037	10.83	0.00	42.83	4.46
4980	5606	9.354673	CAATAATAACATCTACAATTGGACCCT	57.645	33.333	10.83	0.00	0.00	4.34
4981	5607	9.574516	AATAATAACATCTACAATTGGACCCTC	57.425	33.333	10.83	0.00	0.00	4.30
4982	5608	4.927267	AACATCTACAATTGGACCCTCA	57.073	40.909	10.83	0.00	0.00	3.86
4983	5609	5.456921	AACATCTACAATTGGACCCTCAT	57.543	39.130	10.83	0.00	0.00	2.90
4984	5610	6.575244	AACATCTACAATTGGACCCTCATA	57.425	37.500	10.83	0.00	0.00	2.15
4985	5611	5.930135	ACATCTACAATTGGACCCTCATAC	58.070	41.667	10.83	0.00	0.00	2.39
4986	5612	5.163195	ACATCTACAATTGGACCCTCATACC	60.163	44.000	10.83	0.00	0.00	2.73
4987	5613	3.714798	TCTACAATTGGACCCTCATACCC	59.285	47.826	10.83	0.00	0.00	3.69
4988	5614	1.211949	ACAATTGGACCCTCATACCCG	59.788	52.381	10.83	0.00	0.00	5.28
4989	5615	0.182775	AATTGGACCCTCATACCCGC	59.817	55.000	0.00	0.00	0.00	6.13
4990	5616	1.705997	ATTGGACCCTCATACCCGCC	61.706	60.000	0.00	0.00	0.00	6.13
4991	5617	3.925090	GGACCCTCATACCCGCCG	61.925	72.222	0.00	0.00	0.00	6.46
4992	5618	4.603946	GACCCTCATACCCGCCGC	62.604	72.222	0.00	0.00	0.00	6.53
4994	5620	4.169696	CCCTCATACCCGCCGCAA	62.170	66.667	0.00	0.00	0.00	4.85
4995	5621	2.124901	CCTCATACCCGCCGCAAA	60.125	61.111	0.00	0.00	0.00	3.68
4996	5622	2.469516	CCTCATACCCGCCGCAAAC	61.470	63.158	0.00	0.00	0.00	2.93
4997	5623	2.808958	CTCATACCCGCCGCAAACG	61.809	63.158	0.00	0.00	39.67	3.60
4998	5624	4.530325	CATACCCGCCGCAAACGC	62.530	66.667	0.00	0.00	38.22	4.84
5018	5644	3.085296	GGGCGGGCTACCCAGTTA	61.085	66.667	10.07	0.00	45.83	2.24
5019	5645	2.449450	GGGCGGGCTACCCAGTTAT	61.449	63.158	10.07	0.00	45.83	1.89
5020	5646	1.530283	GGCGGGCTACCCAGTTATT	59.470	57.895	3.08	0.00	45.83	1.40
5021	5647	0.818040	GGCGGGCTACCCAGTTATTG	60.818	60.000	3.08	0.00	45.83	1.90
5022	5648	0.818040	GCGGGCTACCCAGTTATTGG	60.818	60.000	3.08	0.00	45.83	3.16
5023	5649	0.818040	CGGGCTACCCAGTTATTGGC	60.818	60.000	3.08	0.00	45.83	4.52
5024	5650	0.467474	GGGCTACCCAGTTATTGGCC	60.467	60.000	0.00	0.00	46.32	5.36
5025	5651	0.818040	GGCTACCCAGTTATTGGCCG	60.818	60.000	0.00	0.00	46.32	6.13
5026	5652	0.818040	GCTACCCAGTTATTGGCCGG	60.818	60.000	0.00	0.00	46.32	6.13
5027	5653	0.834612	CTACCCAGTTATTGGCCGGA	59.165	55.000	5.05	0.00	46.32	5.14
5028	5654	0.542805	TACCCAGTTATTGGCCGGAC	59.457	55.000	5.05	0.56	46.32	4.79
5029	5655	1.817941	CCCAGTTATTGGCCGGACG	60.818	63.158	5.05	0.00	46.32	4.79
5030	5656	1.219664	CCAGTTATTGGCCGGACGA	59.780	57.895	5.05	0.22	40.87	4.20
5031	5657	0.391927	CCAGTTATTGGCCGGACGAA	60.392	55.000	5.05	0.00	40.87	3.85
5032	5658	1.444836	CAGTTATTGGCCGGACGAAA	58.555	50.000	5.05	0.00	0.00	3.46
5033	5659	1.807742	CAGTTATTGGCCGGACGAAAA	59.192	47.619	5.05	0.00	0.00	2.29
5034	5660	2.226912	CAGTTATTGGCCGGACGAAAAA	59.773	45.455	5.05	0.00	0.00	1.94
5050	5676	2.889200	AAAAACGCACCCAACCAGA	58.111	47.368	0.00	0.00	0.00	3.86
5051	5677	0.458260	AAAAACGCACCCAACCAGAC	59.542	50.000	0.00	0.00	0.00	3.51
5052	5678	0.681564	AAAACGCACCCAACCAGACA	60.682	50.000	0.00	0.00	0.00	3.41
5053	5679	0.467290	AAACGCACCCAACCAGACAT	60.467	50.000	0.00	0.00	0.00	3.06
5054	5680	0.889186	AACGCACCCAACCAGACATC	60.889	55.000	0.00	0.00	0.00	3.06
5055	5681	2.040544	CGCACCCAACCAGACATCC	61.041	63.158	0.00	0.00	0.00	3.51
5056	5682	1.678970	GCACCCAACCAGACATCCC	60.679	63.158	0.00	0.00	0.00	3.85
5057	5683	1.767036	CACCCAACCAGACATCCCA	59.233	57.895	0.00	0.00	0.00	4.37
5058	5684	0.332632	CACCCAACCAGACATCCCAT	59.667	55.000	0.00	0.00	0.00	4.00
5059	5685	1.563879	CACCCAACCAGACATCCCATA	59.436	52.381	0.00	0.00	0.00	2.74
5060	5686	2.175499	CACCCAACCAGACATCCCATAT	59.825	50.000	0.00	0.00	0.00	1.78
5061	5687	2.443255	ACCCAACCAGACATCCCATATC	59.557	50.000	0.00	0.00	0.00	1.63
5062	5688	2.224867	CCCAACCAGACATCCCATATCC	60.225	54.545	0.00	0.00	0.00	2.59
5063	5689	2.550855	CCAACCAGACATCCCATATCCG	60.551	54.545	0.00	0.00	0.00	4.18
5064	5690	1.352083	ACCAGACATCCCATATCCGG	58.648	55.000	0.00	0.00	0.00	5.14
5065	5691	0.036010	CCAGACATCCCATATCCGGC	60.036	60.000	0.00	0.00	0.00	6.13
5066	5692	0.036010	CAGACATCCCATATCCGGCC	60.036	60.000	0.00	0.00	0.00	6.13
5067	5693	1.201429	AGACATCCCATATCCGGCCC	61.201	60.000	0.00	0.00	0.00	5.80
5068	5694	1.463214	ACATCCCATATCCGGCCCA	60.463	57.895	0.00	0.00	0.00	5.36
5069	5695	1.065410	ACATCCCATATCCGGCCCAA	61.065	55.000	0.00	0.00	0.00	4.12
5070	5696	0.112218	CATCCCATATCCGGCCCAAA	59.888	55.000	0.00	0.00	0.00	3.28
5071	5697	0.112412	ATCCCATATCCGGCCCAAAC	59.888	55.000	0.00	0.00	0.00	2.93
5072	5698	1.896660	CCCATATCCGGCCCAAACG	60.897	63.158	0.00	0.00	0.00	3.60
5073	5699	2.551912	CCATATCCGGCCCAAACGC	61.552	63.158	0.00	0.00	0.00	4.84
5074	5700	2.203294	ATATCCGGCCCAAACGCC	60.203	61.111	0.00	0.00	46.13	5.68
5080	5706	4.660938	GGCCCAAACGCCTGGACT	62.661	66.667	0.00	0.00	46.10	3.85
5081	5707	3.365265	GCCCAAACGCCTGGACTG	61.365	66.667	0.00	0.00	38.96	3.51
5082	5708	2.429930	CCCAAACGCCTGGACTGA	59.570	61.111	0.00	0.00	38.96	3.41
5083	5709	1.966451	CCCAAACGCCTGGACTGAC	60.966	63.158	0.00	0.00	38.96	3.51
5084	5710	1.966451	CCAAACGCCTGGACTGACC	60.966	63.158	0.00	0.00	38.96	4.02
5085	5711	2.030562	AAACGCCTGGACTGACCG	59.969	61.111	0.00	0.00	42.61	4.79
5086	5712	3.530910	AAACGCCTGGACTGACCGG	62.531	63.158	0.00	0.00	44.27	5.28
5090	5716	3.314331	CCTGGACTGACCGGCACT	61.314	66.667	0.00	0.00	43.37	4.40
5091	5717	2.743718	CTGGACTGACCGGCACTT	59.256	61.111	0.00	0.00	42.61	3.16
5092	5718	1.374758	CTGGACTGACCGGCACTTC	60.375	63.158	0.00	0.00	42.61	3.01
5093	5719	2.047179	GGACTGACCGGCACTTCC	60.047	66.667	0.00	0.00	0.00	3.46
5094	5720	2.047179	GACTGACCGGCACTTCCC	60.047	66.667	0.00	0.00	0.00	3.97
5095	5721	2.847234	ACTGACCGGCACTTCCCA	60.847	61.111	0.00	0.00	0.00	4.37
5096	5722	2.185310	GACTGACCGGCACTTCCCAT	62.185	60.000	0.00	0.00	0.00	4.00
5097	5723	0.907704	ACTGACCGGCACTTCCCATA	60.908	55.000	0.00	0.00	0.00	2.74
5098	5724	0.462047	CTGACCGGCACTTCCCATAC	60.462	60.000	0.00	0.00	0.00	2.39
5099	5725	1.153229	GACCGGCACTTCCCATACC	60.153	63.158	0.00	0.00	0.00	2.73
5100	5726	2.192175	CCGGCACTTCCCATACCC	59.808	66.667	0.00	0.00	0.00	3.69
5101	5727	2.675242	CCGGCACTTCCCATACCCA	61.675	63.158	0.00	0.00	0.00	4.51
5102	5728	1.451387	CGGCACTTCCCATACCCAC	60.451	63.158	0.00	0.00	0.00	4.61
5103	5729	1.910580	CGGCACTTCCCATACCCACT	61.911	60.000	0.00	0.00	0.00	4.00
5104	5730	0.107165	GGCACTTCCCATACCCACTC	60.107	60.000	0.00	0.00	0.00	3.51
5105	5731	0.618458	GCACTTCCCATACCCACTCA	59.382	55.000	0.00	0.00	0.00	3.41
5106	5732	1.679032	GCACTTCCCATACCCACTCAC	60.679	57.143	0.00	0.00	0.00	3.51
5107	5733	1.628340	CACTTCCCATACCCACTCACA	59.372	52.381	0.00	0.00	0.00	3.58
5108	5734	2.239654	CACTTCCCATACCCACTCACAT	59.760	50.000	0.00	0.00	0.00	3.21
5109	5735	2.505819	ACTTCCCATACCCACTCACATC	59.494	50.000	0.00	0.00	0.00	3.06
5110	5736	2.568546	TCCCATACCCACTCACATCT	57.431	50.000	0.00	0.00	0.00	2.90
5111	5737	3.699025	TCCCATACCCACTCACATCTA	57.301	47.619	0.00	0.00	0.00	1.98
5112	5738	3.576861	TCCCATACCCACTCACATCTAG	58.423	50.000	0.00	0.00	0.00	2.43
5113	5739	3.206639	TCCCATACCCACTCACATCTAGA	59.793	47.826	0.00	0.00	0.00	2.43
5114	5740	3.576118	CCCATACCCACTCACATCTAGAG	59.424	52.174	0.00	0.00	39.04	2.43
5115	5741	3.006323	CCATACCCACTCACATCTAGAGC	59.994	52.174	0.00	0.00	36.58	4.09
5116	5742	1.107114	ACCCACTCACATCTAGAGCG	58.893	55.000	0.00	0.00	36.58	5.03
5117	5743	0.387202	CCCACTCACATCTAGAGCGG	59.613	60.000	0.00	0.00	36.58	5.52
5118	5744	1.393603	CCACTCACATCTAGAGCGGA	58.606	55.000	0.00	0.00	37.48	5.54
5119	5745	1.959985	CCACTCACATCTAGAGCGGAT	59.040	52.381	0.00	0.00	37.48	4.18
5120	5746	3.149981	CCACTCACATCTAGAGCGGATA	58.850	50.000	0.00	0.00	37.48	2.59
5121	5747	3.761218	CCACTCACATCTAGAGCGGATAT	59.239	47.826	0.00	0.00	37.48	1.63
5122	5748	4.380339	CCACTCACATCTAGAGCGGATATG	60.380	50.000	0.00	0.00	37.48	1.78
5123	5749	3.192422	ACTCACATCTAGAGCGGATATGC	59.808	47.826	0.00	0.00	36.58	3.14
5124	5750	2.162408	TCACATCTAGAGCGGATATGCG	59.838	50.000	12.80	12.80	40.67	4.73
5125	5751	1.474478	ACATCTAGAGCGGATATGCGG	59.526	52.381	18.67	1.09	40.67	5.69
5126	5752	1.745653	CATCTAGAGCGGATATGCGGA	59.254	52.381	18.67	6.86	40.67	5.54
5127	5753	2.130272	TCTAGAGCGGATATGCGGAT	57.870	50.000	18.67	0.00	40.67	4.18
5128	5754	1.745653	TCTAGAGCGGATATGCGGATG	59.254	52.381	18.67	0.00	40.67	3.51
5129	5755	0.173481	TAGAGCGGATATGCGGATGC	59.827	55.000	18.67	1.12	40.67	3.91
5130	5756	2.046892	AGCGGATATGCGGATGCC	60.047	61.111	18.67	0.00	41.78	4.40
5131	5757	2.046892	GCGGATATGCGGATGCCT	60.047	61.111	18.67	0.00	41.78	4.75
5132	5758	2.393768	GCGGATATGCGGATGCCTG	61.394	63.158	18.67	0.00	41.78	4.85
5133	5759	1.742880	CGGATATGCGGATGCCTGG	60.743	63.158	8.99	0.00	41.78	4.45
5134	5760	1.679311	GGATATGCGGATGCCTGGA	59.321	57.895	0.00	0.00	41.78	3.86
5135	5761	0.674895	GGATATGCGGATGCCTGGAC	60.675	60.000	0.00	0.00	41.78	4.02
5136	5762	1.004560	ATATGCGGATGCCTGGACG	60.005	57.895	0.00	0.00	41.78	4.79
5177	5803	4.854924	CATGGGCCCACGCGATCA	62.855	66.667	31.51	0.00	35.02	2.92
5178	5804	4.856801	ATGGGCCCACGCGATCAC	62.857	66.667	31.51	0.00	35.02	3.06
5180	5806	4.856801	GGGCCCACGCGATCACAT	62.857	66.667	19.95	0.00	35.02	3.21
5181	5807	3.576356	GGCCCACGCGATCACATG	61.576	66.667	15.93	0.00	35.02	3.21
5182	5808	4.241999	GCCCACGCGATCACATGC	62.242	66.667	15.93	1.05	0.00	4.06
5183	5809	2.819154	CCCACGCGATCACATGCA	60.819	61.111	15.93	0.00	0.00	3.96
5184	5810	2.705220	CCACGCGATCACATGCAG	59.295	61.111	15.93	0.00	0.00	4.41
5185	5811	1.810853	CCACGCGATCACATGCAGA	60.811	57.895	15.93	0.00	0.00	4.26
5186	5812	1.634753	CACGCGATCACATGCAGAG	59.365	57.895	15.93	0.00	0.00	3.35
5187	5813	0.803380	CACGCGATCACATGCAGAGA	60.803	55.000	15.93	0.00	0.00	3.10
5188	5814	0.527169	ACGCGATCACATGCAGAGAG	60.527	55.000	15.93	0.00	0.00	3.20
5189	5815	1.819226	CGCGATCACATGCAGAGAGC	61.819	60.000	0.00	0.74	45.96	4.09
5198	5824	3.307646	GCAGAGAGCAGCGATTCG	58.692	61.111	0.62	0.62	44.79	3.34
5199	5825	1.226802	GCAGAGAGCAGCGATTCGA	60.227	57.895	10.88	0.00	44.79	3.71
5200	5826	1.478622	GCAGAGAGCAGCGATTCGAC	61.479	60.000	10.88	1.21	44.79	4.20
5201	5827	1.063327	AGAGAGCAGCGATTCGACG	59.937	57.895	10.88	0.27	0.00	5.12
5202	5828	1.941734	GAGAGCAGCGATTCGACGG	60.942	63.158	10.88	3.47	0.00	4.79
5203	5829	2.956964	GAGCAGCGATTCGACGGG	60.957	66.667	10.88	1.36	0.00	5.28
5220	5846	4.516195	GCGCCTCCTCCGGTTCTC	62.516	72.222	0.00	0.00	0.00	2.87
5221	5847	4.194720	CGCCTCCTCCGGTTCTCG	62.195	72.222	0.00	0.00	38.88	4.04
5230	5856	2.885644	CGGTTCTCGGTGCGGATG	60.886	66.667	0.00	0.00	34.75	3.51
5231	5857	3.195698	GGTTCTCGGTGCGGATGC	61.196	66.667	0.00	0.00	43.20	3.91
5241	5867	2.050714	GCGGATGCATTCATGGCG	60.051	61.111	5.66	0.00	42.15	5.69
5242	5868	2.050714	CGGATGCATTCATGGCGC	60.051	61.111	5.66	0.00	31.96	6.53
5243	5869	2.337532	GGATGCATTCATGGCGCC	59.662	61.111	22.73	22.73	31.96	6.53
5244	5870	2.050714	GATGCATTCATGGCGCCG	60.051	61.111	23.90	8.74	31.96	6.46
5245	5871	4.274700	ATGCATTCATGGCGCCGC	62.275	61.111	23.90	18.37	0.00	6.53
5247	5873	4.619140	GCATTCATGGCGCCGCTC	62.619	66.667	23.90	0.00	0.00	5.03
5248	5874	3.957535	CATTCATGGCGCCGCTCC	61.958	66.667	23.90	0.00	0.00	4.70
5269	5895	2.588034	GTGCCGGGGCGTCTATTC	60.588	66.667	2.18	0.00	45.51	1.75
5278	5904	0.249911	GGCGTCTATTCAAGCCGGAT	60.250	55.000	5.05	0.00	40.17	4.18
5326	5952	0.725133	ATTCCTTCCCTCTCCCTCCA	59.275	55.000	0.00	0.00	0.00	3.86
5331	5957	2.056099	TTCCCTCTCCCTCCAACCCA	62.056	60.000	0.00	0.00	0.00	4.51
5365	5995	1.072806	CATCTGCCCCATAGCTGCTAA	59.927	52.381	14.13	0.00	0.00	3.09
5376	6006	2.272146	CTGCTAACCATGGCCCGT	59.728	61.111	13.04	0.00	30.79	5.28
5378	6008	2.895372	GCTAACCATGGCCCGTCG	60.895	66.667	13.04	0.00	0.00	5.12
5412	6042	3.499737	GCCATGTTGACGCCGGAG	61.500	66.667	5.05	3.72	0.00	4.63
5431	6061	2.047844	GCTGGTTGCAGCTCGAGA	60.048	61.111	18.75	0.00	44.31	4.04
5441	6071	1.135915	GCAGCTCGAGAAGGAGATTCA	59.864	52.381	18.75	0.00	40.67	2.57
5447	6077	2.768527	TCGAGAAGGAGATTCAGGCAAT	59.231	45.455	0.00	0.00	40.67	3.56
5450	6080	2.025605	AGAAGGAGATTCAGGCAATGCA	60.026	45.455	7.79	0.00	40.67	3.96
5464	6094	1.130938	CAATGCACGCTGCTTATGTCA	59.869	47.619	10.54	0.00	45.31	3.58
5475	6105	2.169561	TGCTTATGTCATTGTCGGCCTA	59.830	45.455	0.00	0.00	0.00	3.93
5513	6143	2.430610	CGGAGAAGGAGGAGGCAGG	61.431	68.421	0.00	0.00	0.00	4.85
5515	6145	2.041928	AGAAGGAGGAGGCAGGGG	59.958	66.667	0.00	0.00	0.00	4.79
5516	6146	2.041265	GAAGGAGGAGGCAGGGGA	59.959	66.667	0.00	0.00	0.00	4.81
5517	6147	2.041928	AAGGAGGAGGCAGGGGAG	59.958	66.667	0.00	0.00	0.00	4.30
5518	6148	3.649652	AAGGAGGAGGCAGGGGAGG	62.650	68.421	0.00	0.00	0.00	4.30
5522	6152	4.423209	GGAGGCAGGGGAGGAGGT	62.423	72.222	0.00	0.00	0.00	3.85
5671	6311	2.156051	GAGTTCGAGGTCGCCCAAGT	62.156	60.000	0.00	0.00	39.60	3.16
5728	6368	2.486191	CCATCCAGGACAAGACCTATGC	60.486	54.545	0.00	0.00	41.22	3.14
5730	6370	0.824109	CCAGGACAAGACCTATGCGA	59.176	55.000	0.00	0.00	38.32	5.10
5741	6381	1.153449	CTATGCGAAGGCCAACCGA	60.153	57.895	5.01	0.00	42.76	4.69
5795	6467	2.021457	GAGCTCTTCGCCTCTAGTTCT	58.979	52.381	6.43	0.00	40.39	3.01
5802	6474	0.100861	CGCCTCTAGTTCTTCCGACC	59.899	60.000	0.00	0.00	0.00	4.79
5807	6479	2.486982	CTCTAGTTCTTCCGACCACGAA	59.513	50.000	0.00	0.00	42.66	3.85
5808	6480	3.087031	TCTAGTTCTTCCGACCACGAAT	58.913	45.455	0.00	0.00	42.66	3.34
5809	6481	2.833631	AGTTCTTCCGACCACGAATT	57.166	45.000	0.00	0.00	42.66	2.17
5843	6539	3.242291	CCCATCTACCCGGAGCCC	61.242	72.222	0.73	0.00	0.00	5.19
5871	6567	0.738975	GATCGTGGACATCTCCGACA	59.261	55.000	0.00	0.00	39.88	4.35
5880	6576	3.376540	GACATCTCCGACAATGAGTAGC	58.623	50.000	0.00	0.00	0.00	3.58
5889	6586	4.021981	CCGACAATGAGTAGCTGGATATGA	60.022	45.833	0.00	0.00	0.00	2.15
5895	6592	6.650427	ATGAGTAGCTGGATATGAACGTAA	57.350	37.500	0.00	0.00	0.00	3.18
5942	6641	5.827797	GGCTTGTATGGATTTGAGGTATGAA	59.172	40.000	0.00	0.00	0.00	2.57
5947	6646	9.967451	TTGTATGGATTTGAGGTATGAAGTTTA	57.033	29.630	0.00	0.00	0.00	2.01
5958	6657	6.110707	AGGTATGAAGTTTAACGTACATGGG	58.889	40.000	0.00	0.00	32.25	4.00
5959	6658	5.876460	GGTATGAAGTTTAACGTACATGGGT	59.124	40.000	0.00	0.00	32.25	4.51
5960	6659	6.036408	GGTATGAAGTTTAACGTACATGGGTC	59.964	42.308	0.00	0.00	32.25	4.46
5961	6660	4.317488	TGAAGTTTAACGTACATGGGTCC	58.683	43.478	0.00	0.00	0.00	4.46
5962	6661	4.202336	TGAAGTTTAACGTACATGGGTCCA	60.202	41.667	0.00	0.00	0.00	4.02

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
95	96	4.155709	TGGATGCAAGTTTTGGTATTGGA	58.844	39.130	0.00	0.00	0.00	3.53
341	355	1.066605	ACAGATACGCGAATAACGGCT	59.933	47.619	15.93	0.00	42.83	5.52
346	360	1.762419	GCCGACAGATACGCGAATAA	58.238	50.000	15.93	0.00	0.00	1.40
347	361	0.385098	CGCCGACAGATACGCGAATA	60.385	55.000	15.93	0.00	34.42	1.75
554	569	4.011517	CTACCCAACCACGGCCGT	62.012	66.667	28.70	28.70	0.00	5.68
669	727	5.689383	TTCCATTTTTCTTCACTCTTCCG	57.311	39.130	0.00	0.00	0.00	4.30
690	748	2.493278	CCGCATCCCACTTCATTCTTTT	59.507	45.455	0.00	0.00	0.00	2.27
691	749	2.094675	CCGCATCCCACTTCATTCTTT	58.905	47.619	0.00	0.00	0.00	2.52
692	750	1.004745	ACCGCATCCCACTTCATTCTT	59.995	47.619	0.00	0.00	0.00	2.52
693	751	0.620556	ACCGCATCCCACTTCATTCT	59.379	50.000	0.00	0.00	0.00	2.40
694	752	1.017387	GACCGCATCCCACTTCATTC	58.983	55.000	0.00	0.00	0.00	2.67
695	753	0.744414	CGACCGCATCCCACTTCATT	60.744	55.000	0.00	0.00	0.00	2.57
696	754	1.153369	CGACCGCATCCCACTTCAT	60.153	57.895	0.00	0.00	0.00	2.57
697	755	2.264480	CGACCGCATCCCACTTCA	59.736	61.111	0.00	0.00	0.00	3.02
698	756	2.511600	CCGACCGCATCCCACTTC	60.512	66.667	0.00	0.00	0.00	3.01
699	757	3.000819	TCCGACCGCATCCCACTT	61.001	61.111	0.00	0.00	0.00	3.16
712	770	4.089757	CCCCCTCCCTTCCTCCGA	62.090	72.222	0.00	0.00	0.00	4.55
768	848	4.373116	GCGCGTGTTCTCCCCTGA	62.373	66.667	8.43	0.00	0.00	3.86
831	911	3.645975	CGCGACCCAAGTTTGCGT	61.646	61.111	0.00	0.00	42.63	5.24
865	945	4.154347	CTCTGGCTCCGGTCAGGC	62.154	72.222	17.31	14.05	44.58	4.85
866	946	4.154347	GCTCTGGCTCCGGTCAGG	62.154	72.222	17.31	11.51	44.58	3.86
867	947	4.154347	GGCTCTGGCTCCGGTCAG	62.154	72.222	0.00	8.56	45.72	3.51
1151	1268	2.943680	GATGAGCTAGTGCGCGCAGA	62.944	60.000	37.44	24.47	42.75	4.26
1365	1520	2.450243	GGGACTGGGAGTGGGAGA	59.550	66.667	0.00	0.00	0.00	3.71
1379	1534	2.271173	CTGATGCTGCTGCTGGGA	59.729	61.111	17.00	0.00	40.48	4.37
1420	1578	1.801913	CGAGAAGAACCGGCTCACG	60.802	63.158	7.76	3.48	43.80	4.35
1792	1997	3.515286	GATCACGGGCGAGGACGA	61.515	66.667	0.00	0.00	42.66	4.20
1794	1999	2.734756	GATCGATCACGGGCGAGGAC	62.735	65.000	20.52	0.00	40.14	3.85
1795	2000	2.518587	ATCGATCACGGGCGAGGA	60.519	61.111	0.00	0.00	40.14	3.71
1797	2002	2.427575	CGATCGATCACGGGCGAG	60.428	66.667	24.40	2.41	40.14	5.03
1798	2003	2.893449	CTCGATCGATCACGGGCGA	61.893	63.158	24.40	14.22	40.57	5.54
1803	2008	1.795872	AGTAGAGCTCGATCGATCACG	59.204	52.381	24.40	15.02	41.26	4.35
1804	2009	2.095969	CCAGTAGAGCTCGATCGATCAC	60.096	54.545	24.40	13.29	0.00	3.06
1805	2010	2.147150	CCAGTAGAGCTCGATCGATCA	58.853	52.381	24.40	11.08	0.00	2.92
1806	2011	1.135803	GCCAGTAGAGCTCGATCGATC	60.136	57.143	19.78	15.10	0.00	3.69
1807	2012	0.878416	GCCAGTAGAGCTCGATCGAT	59.122	55.000	19.78	4.24	0.00	3.59
1808	2013	0.179043	AGCCAGTAGAGCTCGATCGA	60.179	55.000	18.32	18.32	34.91	3.59
1809	2014	0.665835	AAGCCAGTAGAGCTCGATCG	59.334	55.000	9.36	9.36	40.49	3.69
1830	2035	1.227118	GCTTCCCACGAGCTAGAGC	60.227	63.158	0.00	0.00	42.49	4.09
1833	2038	1.323271	TGAGGCTTCCCACGAGCTAG	61.323	60.000	0.00	0.00	40.01	3.42
1834	2039	0.687757	ATGAGGCTTCCCACGAGCTA	60.688	55.000	0.00	0.00	40.01	3.32
1835	2040	0.687757	TATGAGGCTTCCCACGAGCT	60.688	55.000	0.00	0.00	40.01	4.09
1836	2041	0.394565	ATATGAGGCTTCCCACGAGC	59.605	55.000	0.00	0.00	39.41	5.03
1837	2042	1.414181	ACATATGAGGCTTCCCACGAG	59.586	52.381	10.38	0.00	0.00	4.18
1839	2044	1.138859	TCACATATGAGGCTTCCCACG	59.861	52.381	10.38	0.00	0.00	4.94
1840	2045	3.406764	GATCACATATGAGGCTTCCCAC	58.593	50.000	10.38	0.00	38.57	4.61
1841	2046	2.373169	GGATCACATATGAGGCTTCCCA	59.627	50.000	10.38	0.00	38.57	4.37
1842	2047	2.613977	CGGATCACATATGAGGCTTCCC	60.614	54.545	10.38	0.60	38.57	3.97
1851	2056	0.035881	AGGCTGGCGGATCACATATG	59.964	55.000	0.00	0.00	0.00	1.78
1854	2059	1.050988	ACTAGGCTGGCGGATCACAT	61.051	55.000	0.00	0.00	0.00	3.21
1862	2067	2.279517	CCGCTAACTAGGCTGGCG	60.280	66.667	15.08	15.08	44.48	5.69
1891	2096	4.807443	AGAGGCGTAACTAGAAACTGAAC	58.193	43.478	0.00	0.00	0.00	3.18
1925	2141	6.771749	ACGGTGAGCAGTACTATTATCTAAGT	59.228	38.462	0.00	0.00	0.00	2.24
1937	2153	2.277084	CCCAATTACGGTGAGCAGTAC	58.723	52.381	0.00	0.00	0.00	2.73
1940	2156	0.676466	TGCCCAATTACGGTGAGCAG	60.676	55.000	0.00	0.00	0.00	4.24
1941	2157	0.250945	TTGCCCAATTACGGTGAGCA	60.251	50.000	0.00	0.00	0.00	4.26
1942	2158	1.102978	ATTGCCCAATTACGGTGAGC	58.897	50.000	0.00	0.00	0.00	4.26
1944	2160	3.537580	GAGTATTGCCCAATTACGGTGA	58.462	45.455	0.00	0.00	32.50	4.02
1946	2162	2.508300	AGGAGTATTGCCCAATTACGGT	59.492	45.455	0.00	0.00	32.50	4.83
1947	2163	3.139077	GAGGAGTATTGCCCAATTACGG	58.861	50.000	0.00	0.00	32.50	4.02
1951	2167	4.726825	TCTTAGGAGGAGTATTGCCCAATT	59.273	41.667	0.00	0.00	32.50	2.32
1952	2168	4.307259	TCTTAGGAGGAGTATTGCCCAAT	58.693	43.478	0.00	0.00	34.93	3.16
1953	2169	3.731431	TCTTAGGAGGAGTATTGCCCAA	58.269	45.455	0.00	0.00	0.00	4.12
1954	2170	3.414759	TCTTAGGAGGAGTATTGCCCA	57.585	47.619	0.00	0.00	0.00	5.36
1955	2171	3.056465	CGATCTTAGGAGGAGTATTGCCC	60.056	52.174	0.00	0.00	0.00	5.36
1956	2172	3.827302	TCGATCTTAGGAGGAGTATTGCC	59.173	47.826	0.00	0.00	0.00	4.52
1957	2173	4.614078	CGTCGATCTTAGGAGGAGTATTGC	60.614	50.000	0.00	0.00	0.00	3.56
1958	2174	4.755629	TCGTCGATCTTAGGAGGAGTATTG	59.244	45.833	0.00	0.00	0.00	1.90
1960	2176	4.620589	TCGTCGATCTTAGGAGGAGTAT	57.379	45.455	0.00	0.00	0.00	2.12
1962	2178	3.207778	CTTCGTCGATCTTAGGAGGAGT	58.792	50.000	0.00	0.00	0.00	3.85
1963	2179	2.550606	CCTTCGTCGATCTTAGGAGGAG	59.449	54.545	4.94	0.00	0.00	3.69
1968	2268	3.777465	TTGACCTTCGTCGATCTTAGG	57.223	47.619	8.80	8.80	42.37	2.69
1971	2271	2.893637	CCATTGACCTTCGTCGATCTT	58.106	47.619	0.00	0.00	40.58	2.40
1973	2273	0.931005	GCCATTGACCTTCGTCGATC	59.069	55.000	0.00	0.00	40.58	3.69
1979	2279	1.644786	GAACCGGCCATTGACCTTCG	61.645	60.000	0.00	0.00	0.00	3.79
1992	2292	1.545582	AGCACAAATTGATGGAACCGG	59.454	47.619	0.00	0.00	0.00	5.28
1993	2293	2.489329	AGAGCACAAATTGATGGAACCG	59.511	45.455	0.00	0.00	0.00	4.44
1995	2295	5.163713	GGAGTAGAGCACAAATTGATGGAAC	60.164	44.000	0.00	0.00	0.00	3.62
1999	2299	7.714377	AGATTAGGAGTAGAGCACAAATTGATG	59.286	37.037	0.00	0.00	0.00	3.07
2003	2303	6.951971	ACAGATTAGGAGTAGAGCACAAATT	58.048	36.000	0.00	0.00	0.00	1.82
2004	2304	6.552445	ACAGATTAGGAGTAGAGCACAAAT	57.448	37.500	0.00	0.00	0.00	2.32
2005	2305	6.166279	CAACAGATTAGGAGTAGAGCACAAA	58.834	40.000	0.00	0.00	0.00	2.83
2008	2308	4.442192	CCCAACAGATTAGGAGTAGAGCAC	60.442	50.000	0.00	0.00	0.00	4.40
2009	2309	3.706594	CCCAACAGATTAGGAGTAGAGCA	59.293	47.826	0.00	0.00	0.00	4.26
2010	2310	3.707102	ACCCAACAGATTAGGAGTAGAGC	59.293	47.826	0.00	0.00	0.00	4.09
2011	2311	4.100189	CCACCCAACAGATTAGGAGTAGAG	59.900	50.000	0.00	0.00	0.00	2.43
2012	2312	4.030913	CCACCCAACAGATTAGGAGTAGA	58.969	47.826	0.00	0.00	0.00	2.59
2013	2313	3.432326	GCCACCCAACAGATTAGGAGTAG	60.432	52.174	0.00	0.00	0.00	2.57
2014	2314	2.504175	GCCACCCAACAGATTAGGAGTA	59.496	50.000	0.00	0.00	0.00	2.59
2015	2315	1.282157	GCCACCCAACAGATTAGGAGT	59.718	52.381	0.00	0.00	0.00	3.85
2041	2358	0.249868	CTCCTTCGTGACACTTGCCA	60.250	55.000	3.68	0.00	0.00	4.92
2042	2359	0.033504	TCTCCTTCGTGACACTTGCC	59.966	55.000	3.68	0.00	0.00	4.52
2043	2360	1.140816	GTCTCCTTCGTGACACTTGC	58.859	55.000	3.68	0.00	33.57	4.01
2044	2361	1.409412	CGTCTCCTTCGTGACACTTG	58.591	55.000	3.68	0.00	33.05	3.16
2045	2362	0.314302	CCGTCTCCTTCGTGACACTT	59.686	55.000	3.68	0.00	33.05	3.16
2046	2363	1.524863	CCCGTCTCCTTCGTGACACT	61.525	60.000	3.68	0.00	33.05	3.55
2047	2364	1.080705	CCCGTCTCCTTCGTGACAC	60.081	63.158	0.00	0.00	33.05	3.67
2048	2365	2.927580	GCCCGTCTCCTTCGTGACA	61.928	63.158	0.00	0.00	33.05	3.58
2050	2367	3.744719	CGCCCGTCTCCTTCGTGA	61.745	66.667	0.00	0.00	0.00	4.35
2051	2368	4.796231	CCGCCCGTCTCCTTCGTG	62.796	72.222	0.00	0.00	0.00	4.35
2053	2370	1.731433	TATTCCGCCCGTCTCCTTCG	61.731	60.000	0.00	0.00	0.00	3.79
2100	2422	3.776969	ACAGGATGATGAGGAGTGCTTTA	59.223	43.478	0.00	0.00	39.69	1.85
2144	2471	7.290813	TGAGATGAGTAGATAAGGTGCTCTTA	58.709	38.462	0.00	3.32	41.66	2.10
2145	2472	6.132658	TGAGATGAGTAGATAAGGTGCTCTT	58.867	40.000	0.00	0.00	39.40	2.85
2161	2488	6.827586	TGAGATGAGATGAGATGAGATGAG	57.172	41.667	0.00	0.00	0.00	2.90
2162	2489	7.179269	AGATGAGATGAGATGAGATGAGATGA	58.821	38.462	0.00	0.00	0.00	2.92
2179	2506	2.701423	AGTGCTGCATCTGAGATGAGAT	59.299	45.455	25.58	7.47	32.59	2.75
2180	2507	2.108970	AGTGCTGCATCTGAGATGAGA	58.891	47.619	25.58	10.12	0.00	3.27
2224	2551	8.437742	CCAATGAATGAAGTTTTTACATGCTTC	58.562	33.333	0.00	0.00	38.17	3.86
2239	2566	4.220163	TGCTTATGTGTGCCAATGAATGAA	59.780	37.500	0.00	0.00	0.00	2.57
2255	2582	2.161012	CAGGTTCAGTGCACTGCTTATG	59.839	50.000	36.76	27.23	43.46	1.90
2325	2658	0.540923	AGCAAGGAGAGCAGGATCAC	59.459	55.000	0.00	0.00	0.00	3.06
2335	2668	2.752358	CCACTGCCAGCAAGGAGA	59.248	61.111	5.12	0.00	41.22	3.71
2395	2728	9.102757	GGTAATGTTGAGTGATATATATGCCTG	57.897	37.037	0.00	0.00	0.00	4.85
2404	2737	5.744171	TGTGCTGGTAATGTTGAGTGATAT	58.256	37.500	0.00	0.00	0.00	1.63
2405	2738	5.159273	TGTGCTGGTAATGTTGAGTGATA	57.841	39.130	0.00	0.00	0.00	2.15
2406	2739	4.019792	TGTGCTGGTAATGTTGAGTGAT	57.980	40.909	0.00	0.00	0.00	3.06
2407	2740	3.483808	TGTGCTGGTAATGTTGAGTGA	57.516	42.857	0.00	0.00	0.00	3.41
2413	2746	2.483877	CGTGACATGTGCTGGTAATGTT	59.516	45.455	1.15	0.00	34.74	2.71
2415	2748	1.202065	GCGTGACATGTGCTGGTAATG	60.202	52.381	1.15	0.00	0.00	1.90
2436	2769	3.866582	AGGTGCTATGAGCCGCCC	61.867	66.667	0.00	0.00	41.51	6.13
2455	2788	5.467735	TGTTCGCTAATCAATCATGGATGAG	59.532	40.000	7.30	0.36	40.64	2.90
2468	2801	7.007815	GCTTCTTCTGAATTTTGTTCGCTAATC	59.992	37.037	0.00	0.00	0.00	1.75
2495	2828	2.874701	GCCTATGCCTTATCTGTGTGTG	59.125	50.000	0.00	0.00	0.00	3.82
2501	2834	4.623932	TTACCTGCCTATGCCTTATCTG	57.376	45.455	0.00	0.00	36.33	2.90
2512	2845	5.393352	CGCACGGTATATATTTACCTGCCTA	60.393	44.000	24.08	0.00	40.01	3.93
2513	2846	4.619863	CGCACGGTATATATTTACCTGCCT	60.620	45.833	24.08	6.88	40.01	4.75
2514	2847	3.615496	CGCACGGTATATATTTACCTGCC	59.385	47.826	24.08	15.13	40.01	4.85
2515	2848	4.090930	CACGCACGGTATATATTTACCTGC	59.909	45.833	22.31	22.31	39.65	4.85
2516	2849	5.224888	ACACGCACGGTATATATTTACCTG	58.775	41.667	17.18	14.77	39.65	4.00
2517	2850	5.458041	ACACGCACGGTATATATTTACCT	57.542	39.130	17.18	5.15	39.65	3.08
2518	2851	4.321745	CGACACGCACGGTATATATTTACC	59.678	45.833	11.29	11.29	38.63	2.85
2519	2852	5.411779	CGACACGCACGGTATATATTTAC	57.588	43.478	0.00	0.00	0.00	2.01
2554	2887	2.676839	GCTTCATGACAGTCACATCAGG	59.323	50.000	5.05	0.00	0.00	3.86
2573	2906	5.868801	CCGTTTGATTCATTAACATTTGGCT	59.131	36.000	2.98	0.00	0.00	4.75
2576	2909	6.702972	TGCCGTTTGATTCATTAACATTTG	57.297	33.333	2.98	0.00	0.00	2.32
2598	2931	2.593775	CACGCGGTGCAATTTCTAATTG	59.406	45.455	12.47	7.58	0.00	2.32
2640	2974	2.689471	GGCAATCATCAACAGCCATACA	59.311	45.455	0.00	0.00	44.59	2.29
2641	2975	2.287188	CGGCAATCATCAACAGCCATAC	60.287	50.000	0.00	0.00	45.47	2.39
2643	2977	0.742505	CGGCAATCATCAACAGCCAT	59.257	50.000	0.00	0.00	45.47	4.40
2644	2978	0.322366	TCGGCAATCATCAACAGCCA	60.322	50.000	0.00	0.00	45.47	4.75
2645	2979	0.099436	GTCGGCAATCATCAACAGCC	59.901	55.000	0.00	0.00	41.86	4.85
2646	2980	1.089920	AGTCGGCAATCATCAACAGC	58.910	50.000	0.00	0.00	0.00	4.40
2647	2981	4.393062	AGTTTAGTCGGCAATCATCAACAG	59.607	41.667	0.00	0.00	0.00	3.16
2649	2983	4.946784	AGTTTAGTCGGCAATCATCAAC	57.053	40.909	0.00	0.00	0.00	3.18
2650	2984	7.361713	CCTTTTAGTTTAGTCGGCAATCATCAA	60.362	37.037	0.00	0.00	0.00	2.57
2652	2986	6.487103	CCTTTTAGTTTAGTCGGCAATCATC	58.513	40.000	0.00	0.00	0.00	2.92
2653	2987	5.163652	GCCTTTTAGTTTAGTCGGCAATCAT	60.164	40.000	0.00	0.00	36.16	2.45
2674	3014	0.987294	ATTGCTCCACTGTACTGCCT	59.013	50.000	0.00	0.00	0.00	4.75
2675	3015	1.826385	AATTGCTCCACTGTACTGCC	58.174	50.000	0.00	0.00	0.00	4.85
2676	3016	2.162408	GGAAATTGCTCCACTGTACTGC	59.838	50.000	0.00	0.00	35.36	4.40
2677	3017	3.679389	AGGAAATTGCTCCACTGTACTG	58.321	45.455	0.00	0.00	38.02	2.74
2680	3020	2.354704	CCGAGGAAATTGCTCCACTGTA	60.355	50.000	8.90	0.00	38.02	2.74
2682	3022	1.089920	CCGAGGAAATTGCTCCACTG	58.910	55.000	8.90	0.00	38.02	3.66
2685	3025	0.392998	GAGCCGAGGAAATTGCTCCA	60.393	55.000	8.90	0.00	43.40	3.86
2699	3039	0.856641	TTTTCAAAGTCGTCGAGCCG	59.143	50.000	0.00	0.00	0.00	5.52
2733	3073	2.035155	AAGGCAGGGTTAACGGCC	59.965	61.111	20.66	20.66	46.77	6.13
2745	3085	2.431683	GCCAGAGACCACAAGGCA	59.568	61.111	0.00	0.00	44.59	4.75
2754	3096	1.461127	CACTTGCTTTACGCCAGAGAC	59.539	52.381	0.00	0.00	35.10	3.36
2770	3115	1.076513	ACCTTTTTATCCCCGCCACTT	59.923	47.619	0.00	0.00	0.00	3.16
2776	3121	5.652994	TCATTTTCACCTTTTTATCCCCG	57.347	39.130	0.00	0.00	0.00	5.73
2779	3124	6.034898	CGCACATCATTTTCACCTTTTTATCC	59.965	38.462	0.00	0.00	0.00	2.59
2856	3202	1.134491	CCGGGTCACTGGGAGAATAAC	60.134	57.143	0.00	0.00	39.64	1.89
2901	3321	5.121105	TGTCATCATCGAGCAGAAATGAAT	58.879	37.500	10.16	0.00	37.07	2.57
2961	3382	2.546899	ACCATGCTACCCTACACTTCA	58.453	47.619	0.00	0.00	0.00	3.02
2998	3435	3.145551	CCCTACGTCGACCCAGGG	61.146	72.222	26.51	26.51	41.83	4.45
3058	3498	2.292569	CAGAGCAAATCAGCAGTTGTGT	59.707	45.455	0.00	0.00	36.85	3.72
3072	3512	2.047844	GTCGCAGAGCCAGAGCAA	60.048	61.111	0.00	0.00	43.56	3.91
3374	3825	0.904865	TGTCGTCCCAGGAGCTCATT	60.905	55.000	17.19	0.00	0.00	2.57
3514	3968	1.890979	CAGTCCGGATGAGCCATGC	60.891	63.158	7.81	0.00	35.94	4.06
3737	4219	4.954875	TGGCAATTTTAAGTCAAGTTGGG	58.045	39.130	2.34	0.00	0.00	4.12
3756	4239	1.336125	GAGCATGCAAGGAGTAATGGC	59.664	52.381	21.98	0.00	0.00	4.40
3778	4263	3.495377	CAGTTTAAACACCCGATCGACAA	59.505	43.478	18.66	0.00	0.00	3.18
3789	4274	7.547722	ACAGGAAAATGGTTTCAGTTTAAACAC	59.452	33.333	20.06	9.22	44.29	3.32
3804	4289	4.605640	AACATCACCAACAGGAAAATGG	57.394	40.909	0.00	0.00	40.16	3.16
3817	4302	8.561738	TGTTCTTCTTTCCTATAAACATCACC	57.438	34.615	0.00	0.00	0.00	4.02
3912	4399	4.081420	CCCATCACTTACTACAGCTCAACT	60.081	45.833	0.00	0.00	0.00	3.16
3913	4400	4.184629	CCCATCACTTACTACAGCTCAAC	58.815	47.826	0.00	0.00	0.00	3.18
3914	4401	3.369471	GCCCATCACTTACTACAGCTCAA	60.369	47.826	0.00	0.00	0.00	3.02
3916	4403	2.168521	TGCCCATCACTTACTACAGCTC	59.831	50.000	0.00	0.00	0.00	4.09
3940	4431	0.245539	CCGCCTTCTACCGAACTGAA	59.754	55.000	0.00	0.00	0.00	3.02
3944	4435	2.176314	AACCCCGCCTTCTACCGAAC	62.176	60.000	0.00	0.00	0.00	3.95
3948	4439	0.037160	TTTCAACCCCGCCTTCTACC	59.963	55.000	0.00	0.00	0.00	3.18
3953	4486	1.203001	TGAGATTTTCAACCCCGCCTT	60.203	47.619	0.00	0.00	31.34	4.35
3956	4489	0.526211	GGTGAGATTTTCAACCCCGC	59.474	55.000	0.00	0.00	37.56	6.13
3958	4491	3.430453	TCATGGTGAGATTTTCAACCCC	58.570	45.455	0.00	0.00	43.20	4.95
3965	4498	6.944290	TCTTCTGTGATTCATGGTGAGATTTT	59.056	34.615	0.00	0.00	0.00	1.82
3968	4501	5.688814	TCTTCTGTGATTCATGGTGAGAT	57.311	39.130	0.00	0.00	0.00	2.75
3970	4503	4.094590	GCTTCTTCTGTGATTCATGGTGAG	59.905	45.833	0.00	0.00	0.00	3.51
3977	4510	3.667497	ACGAGCTTCTTCTGTGATTCA	57.333	42.857	0.00	0.00	0.00	2.57
3982	4515	3.057876	AGTGAGTACGAGCTTCTTCTGTG	60.058	47.826	0.00	0.00	0.00	3.66
3986	4519	5.701855	ACTTTAGTGAGTACGAGCTTCTTC	58.298	41.667	0.00	0.00	0.00	2.87
4015	4548	5.534654	TCAGTTTAGGTCAAAATTCCCAGTG	59.465	40.000	0.00	0.00	0.00	3.66
4016	4549	5.701224	TCAGTTTAGGTCAAAATTCCCAGT	58.299	37.500	0.00	0.00	0.00	4.00
4018	4551	6.609616	ACTTTCAGTTTAGGTCAAAATTCCCA	59.390	34.615	0.00	0.00	0.00	4.37
4019	4552	7.050970	ACTTTCAGTTTAGGTCAAAATTCCC	57.949	36.000	0.00	0.00	0.00	3.97
4028	4573	5.123979	CAGGGCAATACTTTCAGTTTAGGTC	59.876	44.000	0.00	0.00	0.00	3.85
4047	4592	2.151202	TGAATTTTCGTCAGACAGGGC	58.849	47.619	0.41	0.00	0.00	5.19
4083	4629	5.531122	TCTGAAGTAATTAGGTCCATCGG	57.469	43.478	0.00	0.00	0.00	4.18
4133	4689	4.164796	TGCATTATGTGACTTCTCCTGGAT	59.835	41.667	0.00	0.00	0.00	3.41
4136	4692	5.885230	TTTGCATTATGTGACTTCTCCTG	57.115	39.130	0.00	0.00	0.00	3.86
4137	4693	5.769662	TGTTTTGCATTATGTGACTTCTCCT	59.230	36.000	0.00	0.00	0.00	3.69
4148	4704	9.630098	AGAAACTTATCAGTGTTTTGCATTATG	57.370	29.630	0.00	0.00	36.64	1.90
4152	4709	7.945134	AGAAGAAACTTATCAGTGTTTTGCAT	58.055	30.769	0.00	0.00	36.64	3.96
4154	4711	7.915397	TCAAGAAGAAACTTATCAGTGTTTTGC	59.085	33.333	0.00	0.00	36.64	3.68
4160	4717	9.713740	GCATATTCAAGAAGAAACTTATCAGTG	57.286	33.333	0.00	0.00	40.22	3.66
4161	4718	9.453572	TGCATATTCAAGAAGAAACTTATCAGT	57.546	29.630	0.00	0.00	40.22	3.41
4162	4719	9.932699	CTGCATATTCAAGAAGAAACTTATCAG	57.067	33.333	0.00	0.00	40.22	2.90
4164	4721	8.400947	TGCTGCATATTCAAGAAGAAACTTATC	58.599	33.333	0.00	0.00	40.22	1.75
4284	4842	9.490083	AGATGACCCAACTTTATACTAACTACT	57.510	33.333	0.00	0.00	0.00	2.57
4296	4854	8.085909	CCGTTTTAAAATAGATGACCCAACTTT	58.914	33.333	3.52	0.00	0.00	2.66
4297	4855	7.309560	CCCGTTTTAAAATAGATGACCCAACTT	60.310	37.037	3.52	0.00	0.00	2.66
4298	4856	6.152154	CCCGTTTTAAAATAGATGACCCAACT	59.848	38.462	3.52	0.00	0.00	3.16
4299	4857	6.327154	CCCGTTTTAAAATAGATGACCCAAC	58.673	40.000	3.52	0.00	0.00	3.77
4300	4858	5.419471	CCCCGTTTTAAAATAGATGACCCAA	59.581	40.000	3.52	0.00	0.00	4.12
4301	4859	4.951094	CCCCGTTTTAAAATAGATGACCCA	59.049	41.667	3.52	0.00	0.00	4.51
4302	4860	4.340097	CCCCCGTTTTAAAATAGATGACCC	59.660	45.833	3.52	0.00	0.00	4.46
4303	4861	5.195185	TCCCCCGTTTTAAAATAGATGACC	58.805	41.667	3.52	0.00	0.00	4.02
4304	4862	5.884232	ACTCCCCCGTTTTAAAATAGATGAC	59.116	40.000	3.52	0.00	0.00	3.06
4305	4863	6.069705	ACTCCCCCGTTTTAAAATAGATGA	57.930	37.500	3.52	0.00	0.00	2.92
4306	4864	6.017357	GCTACTCCCCCGTTTTAAAATAGATG	60.017	42.308	3.52	0.00	0.00	2.90
4307	4865	6.060136	GCTACTCCCCCGTTTTAAAATAGAT	58.940	40.000	3.52	0.00	0.00	1.98
4308	4866	5.045724	TGCTACTCCCCCGTTTTAAAATAGA	60.046	40.000	3.52	0.00	0.00	1.98
4309	4867	5.065602	GTGCTACTCCCCCGTTTTAAAATAG	59.934	44.000	3.52	1.99	0.00	1.73
4310	4868	4.943093	GTGCTACTCCCCCGTTTTAAAATA	59.057	41.667	3.52	0.00	0.00	1.40
4311	4869	3.760151	GTGCTACTCCCCCGTTTTAAAAT	59.240	43.478	3.52	0.00	0.00	1.82
4312	4870	3.148412	GTGCTACTCCCCCGTTTTAAAA	58.852	45.455	0.00	0.00	0.00	1.52
4313	4871	2.106166	TGTGCTACTCCCCCGTTTTAAA	59.894	45.455	0.00	0.00	0.00	1.52
4314	4872	1.698532	TGTGCTACTCCCCCGTTTTAA	59.301	47.619	0.00	0.00	0.00	1.52
4315	4873	1.002315	GTGTGCTACTCCCCCGTTTTA	59.998	52.381	0.00	0.00	0.00	1.52
4316	4874	0.250597	GTGTGCTACTCCCCCGTTTT	60.251	55.000	0.00	0.00	0.00	2.43
4317	4875	1.373812	GTGTGCTACTCCCCCGTTT	59.626	57.895	0.00	0.00	0.00	3.60
4318	4876	1.827399	CTGTGTGCTACTCCCCCGTT	61.827	60.000	0.00	0.00	0.00	4.44
4319	4877	2.203728	TGTGTGCTACTCCCCCGT	60.204	61.111	0.00	0.00	0.00	5.28
4320	4878	1.827399	AACTGTGTGCTACTCCCCCG	61.827	60.000	0.00	0.00	0.00	5.73
4321	4879	0.036294	GAACTGTGTGCTACTCCCCC	60.036	60.000	0.00	0.00	0.00	5.40
4322	4880	0.389948	CGAACTGTGTGCTACTCCCC	60.390	60.000	0.00	0.00	0.00	4.81
4323	4881	0.601558	TCGAACTGTGTGCTACTCCC	59.398	55.000	0.00	0.00	0.00	4.30
4324	4882	1.402984	CCTCGAACTGTGTGCTACTCC	60.403	57.143	0.00	0.00	0.00	3.85
4325	4883	1.983972	CCTCGAACTGTGTGCTACTC	58.016	55.000	0.00	0.00	0.00	2.59
4326	4884	0.038159	GCCTCGAACTGTGTGCTACT	60.038	55.000	0.00	0.00	0.00	2.57
4327	4885	1.014564	GGCCTCGAACTGTGTGCTAC	61.015	60.000	0.00	0.00	0.00	3.58
4358	4925	2.473609	TGTGATGCGTAGTGAAAACGAC	59.526	45.455	0.00	0.00	42.90	4.34
4361	4928	2.220133	ACGTGTGATGCGTAGTGAAAAC	59.780	45.455	0.00	0.00	41.06	2.43
4366	4933	0.179250	GCAACGTGTGATGCGTAGTG	60.179	55.000	0.00	0.00	42.10	2.74
4367	4934	1.289109	GGCAACGTGTGATGCGTAGT	61.289	55.000	4.01	0.00	44.18	2.73
4368	4935	1.014044	AGGCAACGTGTGATGCGTAG	61.014	55.000	3.49	0.00	44.18	3.51
4369	4936	0.601576	AAGGCAACGTGTGATGCGTA	60.602	50.000	5.66	0.00	44.18	4.42
4370	4937	0.601576	TAAGGCAACGTGTGATGCGT	60.602	50.000	4.01	1.82	44.18	5.24
4371	4938	0.515127	TTAAGGCAACGTGTGATGCG	59.485	50.000	4.01	0.00	44.18	4.73
4372	4939	2.919666	ATTAAGGCAACGTGTGATGC	57.080	45.000	1.24	1.24	42.66	3.91
4373	4940	7.810766	AATTAAATTAAGGCAACGTGTGATG	57.189	32.000	0.00	0.00	46.39	3.07
4374	4941	8.825667	AAAATTAAATTAAGGCAACGTGTGAT	57.174	26.923	0.00	0.00	46.39	3.06
4375	4942	8.649973	AAAAATTAAATTAAGGCAACGTGTGA	57.350	26.923	0.00	0.00	46.39	3.58
4409	4976	8.538409	TTATGTAAGAAGTTAAGGAAACGTCC	57.462	34.615	0.00	0.00	44.73	4.79
4410	4977	9.201127	ACTTATGTAAGAAGTTAAGGAAACGTC	57.799	33.333	6.78	0.00	44.19	4.34
4412	4979	8.654215	GGACTTATGTAAGAAGTTAAGGAAACG	58.346	37.037	6.78	0.00	37.27	3.60
4506	5084	8.296713	GTCCTGTTTTAGTTTCTGCATAAATCA	58.703	33.333	0.17	1.45	0.00	2.57
4535	5114	0.676151	CTGAGCAGGAGCAGTTTCCC	60.676	60.000	0.00	0.00	45.49	3.97
4573	5152	3.386543	GCATATCTGGTTCTGCGGT	57.613	52.632	0.00	0.00	0.00	5.68
4663	5242	0.388907	CAAGCAAGAAATGGGTGCGG	60.389	55.000	0.00	0.00	0.00	5.69
4670	5249	4.688879	TCCACGTAGTACAAGCAAGAAATG	59.311	41.667	0.38	0.00	41.61	2.32
4671	5250	4.890088	TCCACGTAGTACAAGCAAGAAAT	58.110	39.130	0.38	0.00	41.61	2.17
4679	5291	6.374565	AGCTAGTAATCCACGTAGTACAAG	57.625	41.667	0.38	0.00	41.61	3.16
4688	5300	3.248602	GCCATTGAAGCTAGTAATCCACG	59.751	47.826	0.00	0.00	0.00	4.94
4689	5301	4.455606	AGCCATTGAAGCTAGTAATCCAC	58.544	43.478	0.00	0.00	39.29	4.02
4805	5417	6.736110	ATTTTACCAGGGGAAATGATGATG	57.264	37.500	0.00	0.00	0.00	3.07
4848	5460	5.079689	TGGTAGCACGATAATGACTCAAA	57.920	39.130	0.00	0.00	0.00	2.69
4859	5471	7.339466	AGGAAAAATAATCTTTGGTAGCACGAT	59.661	33.333	0.00	0.00	0.00	3.73
4862	5474	6.531594	GCAGGAAAAATAATCTTTGGTAGCAC	59.468	38.462	0.00	0.00	0.00	4.40
4868	5480	7.442062	ACTTTGTGCAGGAAAAATAATCTTTGG	59.558	33.333	0.00	0.00	0.00	3.28
4896	5519	7.176690	AGGTACATATTTTGTTCCAGGACAAAG	59.823	37.037	13.60	7.87	46.60	2.77
4898	5521	6.548321	AGGTACATATTTTGTTCCAGGACAA	58.452	36.000	5.87	0.00	45.63	3.18
4903	5529	6.766467	GGTAGGAGGTACATATTTTGTTCCAG	59.234	42.308	5.87	0.00	45.63	3.86
4907	5533	8.619683	AGTAGGTAGGAGGTACATATTTTGTT	57.380	34.615	0.00	0.00	39.87	2.83
4958	5584	6.969043	TGAGGGTCCAATTGTAGATGTTATT	58.031	36.000	4.43	0.00	0.00	1.40
4959	5585	6.575244	TGAGGGTCCAATTGTAGATGTTAT	57.425	37.500	4.43	0.00	0.00	1.89
4960	5586	6.575244	ATGAGGGTCCAATTGTAGATGTTA	57.425	37.500	4.43	0.00	0.00	2.41
4961	5587	4.927267	TGAGGGTCCAATTGTAGATGTT	57.073	40.909	4.43	0.00	0.00	2.71
4962	5588	5.163195	GGTATGAGGGTCCAATTGTAGATGT	60.163	44.000	4.43	0.00	0.00	3.06
4963	5589	5.308825	GGTATGAGGGTCCAATTGTAGATG	58.691	45.833	4.43	0.00	0.00	2.90
4964	5590	4.351111	GGGTATGAGGGTCCAATTGTAGAT	59.649	45.833	4.43	0.00	0.00	1.98
4965	5591	3.714798	GGGTATGAGGGTCCAATTGTAGA	59.285	47.826	4.43	0.00	0.00	2.59
4966	5592	3.494398	CGGGTATGAGGGTCCAATTGTAG	60.494	52.174	4.43	0.00	0.00	2.74
4967	5593	2.436542	CGGGTATGAGGGTCCAATTGTA	59.563	50.000	4.43	0.00	0.00	2.41
4968	5594	1.211949	CGGGTATGAGGGTCCAATTGT	59.788	52.381	4.43	0.00	0.00	2.71
4969	5595	1.967319	CGGGTATGAGGGTCCAATTG	58.033	55.000	0.00	0.00	0.00	2.32
4970	5596	0.182775	GCGGGTATGAGGGTCCAATT	59.817	55.000	0.00	0.00	0.00	2.32
4971	5597	1.705997	GGCGGGTATGAGGGTCCAAT	61.706	60.000	0.00	0.00	0.00	3.16
4972	5598	2.372074	GGCGGGTATGAGGGTCCAA	61.372	63.158	0.00	0.00	0.00	3.53
4973	5599	2.766651	GGCGGGTATGAGGGTCCA	60.767	66.667	0.00	0.00	0.00	4.02
4974	5600	3.925090	CGGCGGGTATGAGGGTCC	61.925	72.222	0.00	0.00	0.00	4.46
4975	5601	4.603946	GCGGCGGGTATGAGGGTC	62.604	72.222	9.78	0.00	0.00	4.46
4977	5603	3.690685	TTTGCGGCGGGTATGAGGG	62.691	63.158	9.78	0.00	0.00	4.30
4978	5604	2.124901	TTTGCGGCGGGTATGAGG	60.125	61.111	9.78	0.00	0.00	3.86
4979	5605	2.808958	CGTTTGCGGCGGGTATGAG	61.809	63.158	9.78	0.00	0.00	2.90
4980	5606	2.816083	CGTTTGCGGCGGGTATGA	60.816	61.111	9.78	0.00	0.00	2.15
4981	5607	4.530325	GCGTTTGCGGCGGGTATG	62.530	66.667	9.78	0.00	38.78	2.39
5005	5631	0.467474	GGCCAATAACTGGGTAGCCC	60.467	60.000	8.85	0.62	46.54	5.19
5006	5632	0.818040	CGGCCAATAACTGGGTAGCC	60.818	60.000	2.24	3.29	46.54	3.93
5007	5633	0.818040	CCGGCCAATAACTGGGTAGC	60.818	60.000	2.24	0.00	46.54	3.58
5008	5634	0.834612	TCCGGCCAATAACTGGGTAG	59.165	55.000	2.24	0.00	46.54	3.18
5009	5635	0.542805	GTCCGGCCAATAACTGGGTA	59.457	55.000	2.24	0.00	46.54	3.69
5010	5636	1.301954	GTCCGGCCAATAACTGGGT	59.698	57.895	2.24	0.00	46.54	4.51
5011	5637	1.817941	CGTCCGGCCAATAACTGGG	60.818	63.158	2.24	0.00	46.54	4.45
5013	5639	1.444836	TTTCGTCCGGCCAATAACTG	58.555	50.000	2.24	0.00	0.00	3.16
5014	5640	2.188062	TTTTCGTCCGGCCAATAACT	57.812	45.000	2.24	0.00	0.00	2.24
5015	5641	2.993449	TTTTTCGTCCGGCCAATAAC	57.007	45.000	2.24	0.00	0.00	1.89
5032	5658	0.458260	GTCTGGTTGGGTGCGTTTTT	59.542	50.000	0.00	0.00	0.00	1.94
5033	5659	0.681564	TGTCTGGTTGGGTGCGTTTT	60.682	50.000	0.00	0.00	0.00	2.43
5034	5660	0.467290	ATGTCTGGTTGGGTGCGTTT	60.467	50.000	0.00	0.00	0.00	3.60
5035	5661	0.889186	GATGTCTGGTTGGGTGCGTT	60.889	55.000	0.00	0.00	0.00	4.84
5036	5662	1.302511	GATGTCTGGTTGGGTGCGT	60.303	57.895	0.00	0.00	0.00	5.24
5037	5663	2.040544	GGATGTCTGGTTGGGTGCG	61.041	63.158	0.00	0.00	0.00	5.34
5038	5664	1.678970	GGGATGTCTGGTTGGGTGC	60.679	63.158	0.00	0.00	0.00	5.01
5039	5665	0.332632	ATGGGATGTCTGGTTGGGTG	59.667	55.000	0.00	0.00	0.00	4.61
5040	5666	1.979809	TATGGGATGTCTGGTTGGGT	58.020	50.000	0.00	0.00	0.00	4.51
5041	5667	2.224867	GGATATGGGATGTCTGGTTGGG	60.225	54.545	0.00	0.00	0.00	4.12
5042	5668	2.550855	CGGATATGGGATGTCTGGTTGG	60.551	54.545	0.00	0.00	0.00	3.77
5043	5669	2.550855	CCGGATATGGGATGTCTGGTTG	60.551	54.545	0.00	0.00	40.80	3.77
5044	5670	1.699634	CCGGATATGGGATGTCTGGTT	59.300	52.381	0.00	0.00	40.80	3.67
5045	5671	1.352083	CCGGATATGGGATGTCTGGT	58.648	55.000	0.00	0.00	40.80	4.00
5046	5672	0.036010	GCCGGATATGGGATGTCTGG	60.036	60.000	5.05	4.27	46.39	3.86
5047	5673	0.036010	GGCCGGATATGGGATGTCTG	60.036	60.000	5.05	0.00	0.00	3.51
5048	5674	1.201429	GGGCCGGATATGGGATGTCT	61.201	60.000	5.05	0.00	0.00	3.41
5049	5675	1.299976	GGGCCGGATATGGGATGTC	59.700	63.158	5.05	0.00	0.00	3.06
5050	5676	1.065410	TTGGGCCGGATATGGGATGT	61.065	55.000	5.05	0.00	0.00	3.06
5051	5677	0.112218	TTTGGGCCGGATATGGGATG	59.888	55.000	5.05	0.00	0.00	3.51
5052	5678	0.112412	GTTTGGGCCGGATATGGGAT	59.888	55.000	5.05	0.00	0.00	3.85
5053	5679	1.534697	GTTTGGGCCGGATATGGGA	59.465	57.895	5.05	0.00	0.00	4.37
5054	5680	1.896660	CGTTTGGGCCGGATATGGG	60.897	63.158	5.05	0.00	0.00	4.00
5055	5681	2.551912	GCGTTTGGGCCGGATATGG	61.552	63.158	5.05	0.00	0.00	2.74
5056	5682	2.551912	GGCGTTTGGGCCGGATATG	61.552	63.158	5.05	0.00	44.40	1.78
5057	5683	2.203294	GGCGTTTGGGCCGGATAT	60.203	61.111	5.05	0.00	44.40	1.63
5064	5690	3.365265	CAGTCCAGGCGTTTGGGC	61.365	66.667	4.05	4.05	43.30	5.36
5065	5691	1.966451	GTCAGTCCAGGCGTTTGGG	60.966	63.158	7.36	0.00	38.81	4.12
5066	5692	1.966451	GGTCAGTCCAGGCGTTTGG	60.966	63.158	1.38	1.38	39.70	3.28
5067	5693	2.317609	CGGTCAGTCCAGGCGTTTG	61.318	63.158	0.00	0.00	35.57	2.93
5068	5694	2.030562	CGGTCAGTCCAGGCGTTT	59.969	61.111	0.00	0.00	35.57	3.60
5069	5695	4.003788	CCGGTCAGTCCAGGCGTT	62.004	66.667	0.00	0.00	35.57	4.84
5073	5699	2.788191	GAAGTGCCGGTCAGTCCAGG	62.788	65.000	1.90	0.00	35.57	4.45
5074	5700	1.374758	GAAGTGCCGGTCAGTCCAG	60.375	63.158	1.90	0.00	35.57	3.86
5075	5701	2.741092	GAAGTGCCGGTCAGTCCA	59.259	61.111	1.90	0.00	35.57	4.02
5076	5702	2.047179	GGAAGTGCCGGTCAGTCC	60.047	66.667	1.90	7.91	0.00	3.85
5077	5703	2.047179	GGGAAGTGCCGGTCAGTC	60.047	66.667	1.90	2.41	37.63	3.51
5078	5704	0.907704	TATGGGAAGTGCCGGTCAGT	60.908	55.000	1.90	1.32	37.63	3.41
5079	5705	0.462047	GTATGGGAAGTGCCGGTCAG	60.462	60.000	1.90	0.00	37.63	3.51
5080	5706	1.600107	GTATGGGAAGTGCCGGTCA	59.400	57.895	1.90	0.00	37.63	4.02
5081	5707	1.153229	GGTATGGGAAGTGCCGGTC	60.153	63.158	1.90	0.00	37.63	4.79
5082	5708	2.676265	GGGTATGGGAAGTGCCGGT	61.676	63.158	1.90	0.00	37.63	5.28
5083	5709	2.192175	GGGTATGGGAAGTGCCGG	59.808	66.667	0.00	0.00	37.63	6.13
5084	5710	1.451387	GTGGGTATGGGAAGTGCCG	60.451	63.158	0.00	0.00	37.63	5.69
5085	5711	0.107165	GAGTGGGTATGGGAAGTGCC	60.107	60.000	0.00	0.00	0.00	5.01
5086	5712	0.618458	TGAGTGGGTATGGGAAGTGC	59.382	55.000	0.00	0.00	0.00	4.40
5087	5713	1.628340	TGTGAGTGGGTATGGGAAGTG	59.372	52.381	0.00	0.00	0.00	3.16
5088	5714	2.038863	TGTGAGTGGGTATGGGAAGT	57.961	50.000	0.00	0.00	0.00	3.01
5089	5715	2.774234	AGATGTGAGTGGGTATGGGAAG	59.226	50.000	0.00	0.00	0.00	3.46
5090	5716	2.845659	AGATGTGAGTGGGTATGGGAA	58.154	47.619	0.00	0.00	0.00	3.97
5091	5717	2.568546	AGATGTGAGTGGGTATGGGA	57.431	50.000	0.00	0.00	0.00	4.37
5092	5718	3.576118	CTCTAGATGTGAGTGGGTATGGG	59.424	52.174	0.00	0.00	0.00	4.00
5093	5719	3.006323	GCTCTAGATGTGAGTGGGTATGG	59.994	52.174	0.00	0.00	34.30	2.74
5094	5720	3.304996	CGCTCTAGATGTGAGTGGGTATG	60.305	52.174	0.00	0.00	38.12	2.39
5095	5721	2.887783	CGCTCTAGATGTGAGTGGGTAT	59.112	50.000	0.00	0.00	38.12	2.73
5096	5722	2.298610	CGCTCTAGATGTGAGTGGGTA	58.701	52.381	0.00	0.00	38.12	3.69
5097	5723	1.107114	CGCTCTAGATGTGAGTGGGT	58.893	55.000	0.00	0.00	38.12	4.51
5098	5724	3.955291	CGCTCTAGATGTGAGTGGG	57.045	57.895	0.00	0.00	38.12	4.61
5100	5726	4.731720	CATATCCGCTCTAGATGTGAGTG	58.268	47.826	0.00	0.00	40.55	3.51
5101	5727	3.192422	GCATATCCGCTCTAGATGTGAGT	59.808	47.826	0.00	0.00	35.52	3.41
5102	5728	3.730362	CGCATATCCGCTCTAGATGTGAG	60.730	52.174	0.00	0.00	35.52	3.51
5103	5729	2.162408	CGCATATCCGCTCTAGATGTGA	59.838	50.000	0.00	0.00	35.52	3.58
5104	5730	2.524034	CGCATATCCGCTCTAGATGTG	58.476	52.381	0.00	0.00	36.31	3.21
5105	5731	1.474478	CCGCATATCCGCTCTAGATGT	59.526	52.381	0.00	0.00	0.00	3.06
5106	5732	1.745653	TCCGCATATCCGCTCTAGATG	59.254	52.381	0.00	0.00	0.00	2.90
5107	5733	2.130272	TCCGCATATCCGCTCTAGAT	57.870	50.000	0.00	0.00	0.00	1.98
5108	5734	1.745653	CATCCGCATATCCGCTCTAGA	59.254	52.381	0.00	0.00	0.00	2.43
5109	5735	1.800655	GCATCCGCATATCCGCTCTAG	60.801	57.143	0.00	0.00	38.36	2.43
5110	5736	0.173481	GCATCCGCATATCCGCTCTA	59.827	55.000	0.00	0.00	38.36	2.43
5111	5737	1.079543	GCATCCGCATATCCGCTCT	60.080	57.895	0.00	0.00	38.36	4.09
5112	5738	2.103042	GGCATCCGCATATCCGCTC	61.103	63.158	0.00	0.00	41.24	5.03
5113	5739	2.046892	GGCATCCGCATATCCGCT	60.047	61.111	0.00	0.00	41.24	5.52
5114	5740	2.046892	AGGCATCCGCATATCCGC	60.047	61.111	0.00	0.00	41.24	5.54
5115	5741	1.742880	CCAGGCATCCGCATATCCG	60.743	63.158	0.00	0.00	41.24	4.18
5116	5742	0.674895	GTCCAGGCATCCGCATATCC	60.675	60.000	0.00	0.00	41.24	2.59
5117	5743	1.016130	CGTCCAGGCATCCGCATATC	61.016	60.000	0.00	0.00	41.24	1.63
5118	5744	1.004560	CGTCCAGGCATCCGCATAT	60.005	57.895	0.00	0.00	41.24	1.78
5119	5745	2.421314	CGTCCAGGCATCCGCATA	59.579	61.111	0.00	0.00	41.24	3.14
5160	5786	4.854924	TGATCGCGTGGGCCCATG	62.855	66.667	35.99	35.99	35.02	3.66
5161	5787	4.856801	GTGATCGCGTGGGCCCAT	62.857	66.667	31.45	12.22	35.02	4.00
5163	5789	4.856801	ATGTGATCGCGTGGGCCC	62.857	66.667	17.59	17.59	35.02	5.80
5164	5790	3.576356	CATGTGATCGCGTGGGCC	61.576	66.667	18.89	0.00	35.02	5.80
5165	5791	4.241999	GCATGTGATCGCGTGGGC	62.242	66.667	25.72	11.92	0.00	5.36
5166	5792	2.816360	CTGCATGTGATCGCGTGGG	61.816	63.158	25.72	6.09	0.00	4.61
5167	5793	1.759293	CTCTGCATGTGATCGCGTGG	61.759	60.000	25.72	12.99	0.00	4.94
5168	5794	0.803380	TCTCTGCATGTGATCGCGTG	60.803	55.000	21.68	21.68	0.00	5.34
5169	5795	0.527169	CTCTCTGCATGTGATCGCGT	60.527	55.000	5.77	0.00	0.00	6.01
5170	5796	1.819226	GCTCTCTGCATGTGATCGCG	61.819	60.000	0.00	0.00	42.31	5.87
5171	5797	1.933005	GCTCTCTGCATGTGATCGC	59.067	57.895	0.00	0.00	42.31	4.58
5181	5807	1.226802	TCGAATCGCTGCTCTCTGC	60.227	57.895	0.00	0.00	43.25	4.26
5182	5808	1.199229	CGTCGAATCGCTGCTCTCTG	61.199	60.000	0.00	0.00	0.00	3.35
5183	5809	1.063327	CGTCGAATCGCTGCTCTCT	59.937	57.895	0.00	0.00	0.00	3.10
5184	5810	1.941734	CCGTCGAATCGCTGCTCTC	60.942	63.158	0.00	0.00	0.00	3.20
5185	5811	2.103143	CCGTCGAATCGCTGCTCT	59.897	61.111	0.00	0.00	0.00	4.09
5186	5812	2.956964	CCCGTCGAATCGCTGCTC	60.957	66.667	0.00	0.00	0.00	4.26
5213	5839	2.885644	CATCCGCACCGAGAACCG	60.886	66.667	0.00	0.00	38.18	4.44
5214	5840	3.195698	GCATCCGCACCGAGAACC	61.196	66.667	0.00	0.00	38.36	3.62
5215	5841	2.434185	TGCATCCGCACCGAGAAC	60.434	61.111	0.00	0.00	45.36	3.01
5224	5850	2.050714	CGCCATGAATGCATCCGC	60.051	61.111	0.00	0.00	39.24	5.54
5225	5851	2.050714	GCGCCATGAATGCATCCG	60.051	61.111	0.00	0.00	30.68	4.18
5226	5852	2.337532	GGCGCCATGAATGCATCC	59.662	61.111	24.80	0.00	30.68	3.51
5227	5853	2.050714	CGGCGCCATGAATGCATC	60.051	61.111	28.98	0.00	30.68	3.91
5228	5854	4.274700	GCGGCGCCATGAATGCAT	62.275	61.111	28.98	0.00	34.29	3.96
5230	5856	4.619140	GAGCGGCGCCATGAATGC	62.619	66.667	30.40	20.42	0.00	3.56
5231	5857	3.957535	GGAGCGGCGCCATGAATG	61.958	66.667	30.40	10.13	0.00	2.67
5251	5877	4.171103	AATAGACGCCCCGGCACC	62.171	66.667	6.52	0.00	37.34	5.01
5252	5878	2.588034	GAATAGACGCCCCGGCAC	60.588	66.667	6.52	0.00	37.34	5.01
5253	5879	2.587322	CTTGAATAGACGCCCCGGCA	62.587	60.000	6.52	0.00	37.34	5.69
5254	5880	1.887707	CTTGAATAGACGCCCCGGC	60.888	63.158	0.00	0.00	33.59	6.13
5255	5881	1.887707	GCTTGAATAGACGCCCCGG	60.888	63.158	0.00	0.00	0.00	5.73
5256	5882	1.887707	GGCTTGAATAGACGCCCCG	60.888	63.158	0.00	0.00	36.56	5.73
5257	5883	4.142780	GGCTTGAATAGACGCCCC	57.857	61.111	0.00	0.00	36.56	5.80
5292	5918	3.477578	GAATGGGGACGGGCTAGGC	62.478	68.421	8.00	8.00	0.00	3.93
5378	6008	1.442148	GCGTAGGTGGTGATCCTCC	59.558	63.158	0.00	0.00	45.00	4.30
5416	6046	1.004560	CCTTCTCGAGCTGCAACCA	60.005	57.895	7.81	0.00	0.00	3.67
5431	6061	2.097825	GTGCATTGCCTGAATCTCCTT	58.902	47.619	6.12	0.00	0.00	3.36
5450	6080	1.660607	CGACAATGACATAAGCAGCGT	59.339	47.619	0.00	0.00	0.00	5.07
5500	6130	2.041928	CTCCCCTGCCTCCTCCTT	59.958	66.667	0.00	0.00	0.00	3.36
5513	6143	1.001760	TGCTACTCCACCTCCTCCC	59.998	63.158	0.00	0.00	0.00	4.30
5515	6145	1.681486	GGCTGCTACTCCACCTCCTC	61.681	65.000	0.00	0.00	0.00	3.71
5516	6146	1.687493	GGCTGCTACTCCACCTCCT	60.687	63.158	0.00	0.00	0.00	3.69
5517	6147	2.904131	GGCTGCTACTCCACCTCC	59.096	66.667	0.00	0.00	0.00	4.30
5518	6148	2.496817	CGGCTGCTACTCCACCTC	59.503	66.667	0.00	0.00	0.00	3.85
5522	6152	3.019003	GCTTCCGGCTGCTACTCCA	62.019	63.158	10.58	0.00	38.06	3.86
5569	6199	1.152735	TCCTCCTCCTCCGAATCCG	60.153	63.158	0.00	0.00	0.00	4.18
5570	6200	1.457009	CGTCCTCCTCCTCCGAATCC	61.457	65.000	0.00	0.00	0.00	3.01
5671	6311	3.157252	GCTCCGCCATCTCCTCCA	61.157	66.667	0.00	0.00	0.00	3.86
5717	6357	0.107703	TGGCCTTCGCATAGGTCTTG	60.108	55.000	3.32	0.00	40.67	3.02
5721	6361	1.077716	GGTTGGCCTTCGCATAGGT	60.078	57.895	3.32	0.00	37.63	3.08
5730	6370	2.668550	GAAGCGTCGGTTGGCCTT	60.669	61.111	15.40	0.00	0.00	4.35
5741	6381	3.899981	TTGCTGCCGGATGAAGCGT	62.900	57.895	5.05	0.00	39.88	5.07
5802	6474	1.154225	GCGGCAACTCCAATTCGTG	60.154	57.895	0.00	0.00	34.01	4.35
5807	6479	1.885157	CATGTGCGGCAACTCCAAT	59.115	52.632	3.23	0.00	34.01	3.16
5808	6480	2.918345	GCATGTGCGGCAACTCCAA	61.918	57.895	3.23	0.00	34.01	3.53
5809	6481	3.364441	GCATGTGCGGCAACTCCA	61.364	61.111	3.23	0.00	34.01	3.86
5843	6539	2.347697	TGTCCACGATCTTCTTGTCG	57.652	50.000	0.00	0.00	43.13	4.35
5845	6541	3.118956	GGAGATGTCCACGATCTTCTTGT	60.119	47.826	3.49	0.00	43.31	3.16
5848	6544	1.678627	CGGAGATGTCCACGATCTTCT	59.321	52.381	9.94	0.00	44.18	2.85
5871	6567	5.537300	ACGTTCATATCCAGCTACTCATT	57.463	39.130	0.00	0.00	0.00	2.57
5880	6576	9.706691	AAACCTGTATATTACGTTCATATCCAG	57.293	33.333	0.00	3.38	0.00	3.86
5895	6592	7.506938	AGCCATGCAGATTAAAAACCTGTATAT	59.493	33.333	0.00	0.00	32.79	0.86

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.