Multiple sequence alignment - TraesCS3B01G425100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G425100 | chr3B | 100.000 | 3509 | 0 | 0 | 1 | 3509 | 663036760 | 663040268 | 0.000000e+00 | 6481.0 |
1 | TraesCS3B01G425100 | chr3B | 92.303 | 1624 | 102 | 16 | 871 | 2486 | 663086702 | 663085094 | 0.000000e+00 | 2285.0 |
2 | TraesCS3B01G425100 | chr3B | 92.000 | 50 | 4 | 0 | 3436 | 3485 | 396272030 | 396271981 | 1.750000e-08 | 71.3 |
3 | TraesCS3B01G425100 | chr3D | 94.144 | 2459 | 104 | 17 | 95 | 2536 | 501479638 | 501477203 | 0.000000e+00 | 3707.0 |
4 | TraesCS3B01G425100 | chr3D | 92.204 | 2078 | 107 | 23 | 428 | 2486 | 501513558 | 501511517 | 0.000000e+00 | 2889.0 |
5 | TraesCS3B01G425100 | chr3D | 91.682 | 1623 | 112 | 15 | 871 | 2486 | 501790849 | 501789243 | 0.000000e+00 | 2228.0 |
6 | TraesCS3B01G425100 | chr3D | 89.818 | 550 | 37 | 6 | 2953 | 3489 | 501476954 | 501476411 | 0.000000e+00 | 688.0 |
7 | TraesCS3B01G425100 | chr3D | 91.156 | 441 | 29 | 4 | 1 | 432 | 501528192 | 501527753 | 1.080000e-164 | 590.0 |
8 | TraesCS3B01G425100 | chr3D | 98.000 | 50 | 1 | 0 | 1 | 50 | 501479693 | 501479644 | 1.740000e-13 | 87.9 |
9 | TraesCS3B01G425100 | chr3D | 92.000 | 50 | 4 | 0 | 3436 | 3485 | 322435443 | 322435394 | 1.750000e-08 | 71.3 |
10 | TraesCS3B01G425100 | chr3A | 91.439 | 1647 | 114 | 16 | 871 | 2506 | 641172478 | 641170848 | 0.000000e+00 | 2235.0 |
11 | TraesCS3B01G425100 | chr3A | 90.582 | 1614 | 105 | 20 | 922 | 2533 | 641638844 | 641640412 | 0.000000e+00 | 2095.0 |
12 | TraesCS3B01G425100 | chr3A | 91.390 | 662 | 40 | 9 | 2859 | 3507 | 641170796 | 641170139 | 0.000000e+00 | 891.0 |
13 | TraesCS3B01G425100 | chr3A | 91.667 | 48 | 4 | 0 | 3436 | 3483 | 466791009 | 466791056 | 2.260000e-07 | 67.6 |
14 | TraesCS3B01G425100 | chr6D | 82.450 | 1453 | 247 | 7 | 1024 | 2475 | 5942424 | 5940979 | 0.000000e+00 | 1264.0 |
15 | TraesCS3B01G425100 | chr7D | 82.041 | 1470 | 241 | 17 | 1025 | 2481 | 40033365 | 40031906 | 0.000000e+00 | 1230.0 |
16 | TraesCS3B01G425100 | chr7D | 91.667 | 48 | 4 | 0 | 3438 | 3485 | 376090374 | 376090421 | 2.260000e-07 | 67.6 |
17 | TraesCS3B01G425100 | chr6B | 81.293 | 1454 | 262 | 8 | 1024 | 2475 | 11246689 | 11245244 | 0.000000e+00 | 1170.0 |
18 | TraesCS3B01G425100 | chr4A | 87.156 | 327 | 37 | 4 | 2537 | 2859 | 702009876 | 702010201 | 1.990000e-97 | 366.0 |
19 | TraesCS3B01G425100 | chr1D | 87.077 | 325 | 38 | 3 | 2541 | 2863 | 481307714 | 481308036 | 7.160000e-97 | 364.0 |
20 | TraesCS3B01G425100 | chr7A | 86.154 | 325 | 43 | 1 | 2539 | 2861 | 690433977 | 690434301 | 2.000000e-92 | 350.0 |
21 | TraesCS3B01G425100 | chr7A | 84.524 | 336 | 39 | 12 | 2535 | 2865 | 729948561 | 729948234 | 1.570000e-83 | 320.0 |
22 | TraesCS3B01G425100 | chr4D | 84.985 | 333 | 45 | 4 | 2535 | 2863 | 502379973 | 502380304 | 2.020000e-87 | 333.0 |
23 | TraesCS3B01G425100 | chr4D | 92.000 | 50 | 4 | 0 | 3436 | 3485 | 170225903 | 170225952 | 1.750000e-08 | 71.3 |
24 | TraesCS3B01G425100 | chrUn | 85.139 | 323 | 43 | 4 | 2541 | 2859 | 43586644 | 43586965 | 3.380000e-85 | 326.0 |
25 | TraesCS3B01G425100 | chr5D | 84.953 | 319 | 46 | 1 | 2543 | 2859 | 391744620 | 391744938 | 4.370000e-84 | 322.0 |
26 | TraesCS3B01G425100 | chr5D | 83.333 | 324 | 44 | 8 | 2542 | 2859 | 480753794 | 480753475 | 1.230000e-74 | 291.0 |
27 | TraesCS3B01G425100 | chr5D | 96.000 | 50 | 2 | 0 | 3436 | 3485 | 93064625 | 93064576 | 8.070000e-12 | 82.4 |
28 | TraesCS3B01G425100 | chr5A | 82.407 | 324 | 54 | 3 | 2542 | 2862 | 575900104 | 575899781 | 2.670000e-71 | 279.0 |
29 | TraesCS3B01G425100 | chr5A | 91.228 | 57 | 4 | 1 | 3430 | 3485 | 86662177 | 86662121 | 3.760000e-10 | 76.8 |
30 | TraesCS3B01G425100 | chr2A | 85.938 | 64 | 5 | 4 | 3436 | 3498 | 15032924 | 15032864 | 8.130000e-07 | 65.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G425100 | chr3B | 663036760 | 663040268 | 3508 | False | 6481.0 | 6481 | 100.000000 | 1 | 3509 | 1 | chr3B.!!$F1 | 3508 |
1 | TraesCS3B01G425100 | chr3B | 663085094 | 663086702 | 1608 | True | 2285.0 | 2285 | 92.303000 | 871 | 2486 | 1 | chr3B.!!$R2 | 1615 |
2 | TraesCS3B01G425100 | chr3D | 501511517 | 501513558 | 2041 | True | 2889.0 | 2889 | 92.204000 | 428 | 2486 | 1 | chr3D.!!$R2 | 2058 |
3 | TraesCS3B01G425100 | chr3D | 501789243 | 501790849 | 1606 | True | 2228.0 | 2228 | 91.682000 | 871 | 2486 | 1 | chr3D.!!$R4 | 1615 |
4 | TraesCS3B01G425100 | chr3D | 501476411 | 501479693 | 3282 | True | 1494.3 | 3707 | 93.987333 | 1 | 3489 | 3 | chr3D.!!$R5 | 3488 |
5 | TraesCS3B01G425100 | chr3A | 641638844 | 641640412 | 1568 | False | 2095.0 | 2095 | 90.582000 | 922 | 2533 | 1 | chr3A.!!$F2 | 1611 |
6 | TraesCS3B01G425100 | chr3A | 641170139 | 641172478 | 2339 | True | 1563.0 | 2235 | 91.414500 | 871 | 3507 | 2 | chr3A.!!$R1 | 2636 |
7 | TraesCS3B01G425100 | chr6D | 5940979 | 5942424 | 1445 | True | 1264.0 | 1264 | 82.450000 | 1024 | 2475 | 1 | chr6D.!!$R1 | 1451 |
8 | TraesCS3B01G425100 | chr7D | 40031906 | 40033365 | 1459 | True | 1230.0 | 1230 | 82.041000 | 1025 | 2481 | 1 | chr7D.!!$R1 | 1456 |
9 | TraesCS3B01G425100 | chr6B | 11245244 | 11246689 | 1445 | True | 1170.0 | 1170 | 81.293000 | 1024 | 2475 | 1 | chr6B.!!$R1 | 1451 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
72 | 73 | 0.108615 | CTGGCACGGGACTTACTCAG | 60.109 | 60.0 | 0.00 | 0.00 | 0.00 | 3.35 | F |
89 | 90 | 0.164647 | CAGGCGAGCAGAAAAGAACG | 59.835 | 55.0 | 0.00 | 0.00 | 0.00 | 3.95 | F |
153 | 154 | 0.521450 | CGTCCATAGGATCGCGATCG | 60.521 | 60.0 | 35.36 | 24.09 | 38.69 | 3.69 | F |
962 | 1030 | 0.859232 | CCGTTTCCTTCTCACGTGTG | 59.141 | 55.0 | 16.51 | 13.78 | 31.83 | 3.82 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1999 | 2080 | 1.053424 | TACTCTGGGTTGGTGGACAC | 58.947 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 | R |
2233 | 2320 | 3.745803 | GGAGAACCTCGTCGGCGT | 61.746 | 66.667 | 10.18 | 0.00 | 39.49 | 5.68 | R |
2431 | 2524 | 1.374758 | GCTCCCACGTGTCTTGGAG | 60.375 | 63.158 | 25.62 | 25.62 | 45.83 | 3.86 | R |
2699 | 2828 | 0.028505 | ATTGTGAAGCGCGCATGATC | 59.971 | 50.000 | 35.10 | 23.99 | 36.78 | 2.92 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
34 | 35 | 5.825151 | AGAAGAAACTATCCTTAAGCCATGC | 59.175 | 40.000 | 0.00 | 0.00 | 0.00 | 4.06 |
64 | 65 | 3.890674 | GTGATTCTGGCACGGGAC | 58.109 | 61.111 | 0.00 | 0.00 | 33.92 | 4.46 |
65 | 66 | 1.296715 | GTGATTCTGGCACGGGACT | 59.703 | 57.895 | 0.00 | 0.00 | 33.92 | 3.85 |
66 | 67 | 0.321653 | GTGATTCTGGCACGGGACTT | 60.322 | 55.000 | 0.00 | 0.00 | 33.92 | 3.01 |
67 | 68 | 1.066430 | GTGATTCTGGCACGGGACTTA | 60.066 | 52.381 | 0.00 | 0.00 | 33.92 | 2.24 |
68 | 69 | 1.066430 | TGATTCTGGCACGGGACTTAC | 60.066 | 52.381 | 0.00 | 0.00 | 33.92 | 2.34 |
69 | 70 | 1.207329 | GATTCTGGCACGGGACTTACT | 59.793 | 52.381 | 0.00 | 0.00 | 33.92 | 2.24 |
70 | 71 | 0.606604 | TTCTGGCACGGGACTTACTC | 59.393 | 55.000 | 0.00 | 0.00 | 33.92 | 2.59 |
71 | 72 | 0.541063 | TCTGGCACGGGACTTACTCA | 60.541 | 55.000 | 0.00 | 0.00 | 33.92 | 3.41 |
72 | 73 | 0.108615 | CTGGCACGGGACTTACTCAG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
73 | 74 | 1.218316 | GGCACGGGACTTACTCAGG | 59.782 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
74 | 75 | 1.448013 | GCACGGGACTTACTCAGGC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
75 | 76 | 1.153823 | CACGGGACTTACTCAGGCG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
76 | 77 | 1.303888 | ACGGGACTTACTCAGGCGA | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
77 | 78 | 1.313812 | ACGGGACTTACTCAGGCGAG | 61.314 | 60.000 | 5.08 | 5.08 | 45.49 | 5.03 |
78 | 79 | 1.142097 | GGGACTTACTCAGGCGAGC | 59.858 | 63.158 | 6.32 | 0.00 | 43.66 | 5.03 |
79 | 80 | 1.605058 | GGGACTTACTCAGGCGAGCA | 61.605 | 60.000 | 6.32 | 0.00 | 43.66 | 4.26 |
80 | 81 | 0.179124 | GGACTTACTCAGGCGAGCAG | 60.179 | 60.000 | 6.32 | 5.74 | 43.66 | 4.24 |
81 | 82 | 0.811915 | GACTTACTCAGGCGAGCAGA | 59.188 | 55.000 | 6.32 | 0.00 | 43.66 | 4.26 |
82 | 83 | 1.202582 | GACTTACTCAGGCGAGCAGAA | 59.797 | 52.381 | 6.32 | 0.00 | 43.66 | 3.02 |
83 | 84 | 1.618837 | ACTTACTCAGGCGAGCAGAAA | 59.381 | 47.619 | 6.32 | 0.00 | 43.66 | 2.52 |
84 | 85 | 2.037251 | ACTTACTCAGGCGAGCAGAAAA | 59.963 | 45.455 | 6.32 | 0.00 | 43.66 | 2.29 |
85 | 86 | 2.370281 | TACTCAGGCGAGCAGAAAAG | 57.630 | 50.000 | 6.32 | 0.00 | 43.66 | 2.27 |
86 | 87 | 0.681733 | ACTCAGGCGAGCAGAAAAGA | 59.318 | 50.000 | 6.32 | 0.00 | 43.66 | 2.52 |
87 | 88 | 1.070758 | ACTCAGGCGAGCAGAAAAGAA | 59.929 | 47.619 | 6.32 | 0.00 | 43.66 | 2.52 |
88 | 89 | 1.462670 | CTCAGGCGAGCAGAAAAGAAC | 59.537 | 52.381 | 0.00 | 0.00 | 31.00 | 3.01 |
89 | 90 | 0.164647 | CAGGCGAGCAGAAAAGAACG | 59.835 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
90 | 91 | 0.951040 | AGGCGAGCAGAAAAGAACGG | 60.951 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
91 | 92 | 1.497722 | GCGAGCAGAAAAGAACGGG | 59.502 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
92 | 93 | 1.497722 | CGAGCAGAAAAGAACGGGC | 59.502 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
93 | 94 | 1.497722 | GAGCAGAAAAGAACGGGCG | 59.502 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
99 | 100 | 1.804748 | AGAAAAGAACGGGCGTGATTC | 59.195 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
107 | 108 | 4.395080 | GGCGTGATTCGACGATCA | 57.605 | 55.556 | 0.00 | 2.14 | 42.10 | 2.92 |
153 | 154 | 0.521450 | CGTCCATAGGATCGCGATCG | 60.521 | 60.000 | 35.36 | 24.09 | 38.69 | 3.69 |
335 | 342 | 9.204337 | TGAACTTATTATGCCCAACTACTACTA | 57.796 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
436 | 445 | 6.035843 | CACAAAAACATGTCTATATGCACCC | 58.964 | 40.000 | 0.00 | 0.00 | 0.00 | 4.61 |
554 | 574 | 9.736414 | ATCCGATCAAATCAATCAAGAATATCT | 57.264 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
577 | 597 | 4.638421 | TCATGGTGATAAATCCGTCCAAAC | 59.362 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
581 | 601 | 4.461431 | GGTGATAAATCCGTCCAAACCTTT | 59.539 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
596 | 630 | 9.191995 | GTCCAAACCTTTTTGTATCATAGTTTG | 57.808 | 33.333 | 0.00 | 0.00 | 40.61 | 2.93 |
597 | 631 | 8.919145 | TCCAAACCTTTTTGTATCATAGTTTGT | 58.081 | 29.630 | 10.35 | 0.00 | 40.61 | 2.83 |
601 | 635 | 8.927675 | ACCTTTTTGTATCATAGTTTGTACCA | 57.072 | 30.769 | 0.00 | 0.00 | 0.00 | 3.25 |
602 | 636 | 9.528489 | ACCTTTTTGTATCATAGTTTGTACCAT | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
631 | 665 | 1.564818 | TGTTGGTGTTTGGAGTGGGTA | 59.435 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
679 | 743 | 6.159988 | AGTGCTCAGTCTTCTTGTACATAAC | 58.840 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
692 | 756 | 8.677148 | TCTTGTACATAACTTTGCTTCTCTTT | 57.323 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
693 | 757 | 9.772973 | TCTTGTACATAACTTTGCTTCTCTTTA | 57.227 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
694 | 758 | 9.813080 | CTTGTACATAACTTTGCTTCTCTTTAC | 57.187 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
695 | 759 | 8.319143 | TGTACATAACTTTGCTTCTCTTTACC | 57.681 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
696 | 760 | 6.819397 | ACATAACTTTGCTTCTCTTTACCC | 57.181 | 37.500 | 0.00 | 0.00 | 0.00 | 3.69 |
697 | 761 | 6.543735 | ACATAACTTTGCTTCTCTTTACCCT | 58.456 | 36.000 | 0.00 | 0.00 | 0.00 | 4.34 |
698 | 762 | 7.686434 | ACATAACTTTGCTTCTCTTTACCCTA | 58.314 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
699 | 763 | 8.161425 | ACATAACTTTGCTTCTCTTTACCCTAA | 58.839 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
700 | 764 | 9.010029 | CATAACTTTGCTTCTCTTTACCCTAAA | 57.990 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
701 | 765 | 7.891498 | AACTTTGCTTCTCTTTACCCTAAAA | 57.109 | 32.000 | 0.00 | 0.00 | 0.00 | 1.52 |
702 | 766 | 7.891498 | ACTTTGCTTCTCTTTACCCTAAAAA | 57.109 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
735 | 799 | 7.545965 | TGCTTCTCTTCTACTATAAAACTGTGC | 59.454 | 37.037 | 0.00 | 0.00 | 0.00 | 4.57 |
740 | 804 | 6.971184 | TCTTCTACTATAAAACTGTGCTACGC | 59.029 | 38.462 | 0.00 | 0.00 | 0.00 | 4.42 |
742 | 806 | 4.196626 | ACTATAAAACTGTGCTACGCCA | 57.803 | 40.909 | 0.00 | 0.00 | 0.00 | 5.69 |
744 | 808 | 5.183228 | ACTATAAAACTGTGCTACGCCATT | 58.817 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
745 | 809 | 6.342906 | ACTATAAAACTGTGCTACGCCATTA | 58.657 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
797 | 861 | 7.202093 | CCAGATGGGTTTACTAATAGGATGACA | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 3.58 |
900 | 964 | 2.782192 | GCACGATACGCACACTAGTAAG | 59.218 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
962 | 1030 | 0.859232 | CCGTTTCCTTCTCACGTGTG | 59.141 | 55.000 | 16.51 | 13.78 | 31.83 | 3.82 |
1008 | 1082 | 4.468696 | CGCAGATACTACCATGGCGACA | 62.469 | 54.545 | 13.04 | 0.00 | 45.19 | 4.35 |
1159 | 1233 | 3.379445 | CTGGGTGCCTCCGTACGT | 61.379 | 66.667 | 15.21 | 0.00 | 37.00 | 3.57 |
1444 | 1521 | 1.303317 | GGCCGCTTCCTTTTCTCCA | 60.303 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
1559 | 1639 | 3.984193 | AAGGCATCGTGAGGCTGGC | 62.984 | 63.158 | 6.46 | 0.00 | 42.14 | 4.85 |
2124 | 2211 | 1.246056 | CCATGAAGCTGTGGGTGGTG | 61.246 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2233 | 2320 | 2.658422 | GGCGGTTCGAGGTGGTAA | 59.342 | 61.111 | 0.00 | 0.00 | 0.00 | 2.85 |
2466 | 2559 | 2.960688 | GCTTGTCCGGGAGAAGGCT | 61.961 | 63.158 | 28.85 | 0.00 | 0.00 | 4.58 |
2476 | 2569 | 0.539518 | GGAGAAGGCTGAGGAAGTCC | 59.460 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2538 | 2667 | 4.732784 | ACGTGCGCTGAAATAAAATTCAT | 58.267 | 34.783 | 9.73 | 0.00 | 38.55 | 2.57 |
2539 | 2668 | 5.160641 | ACGTGCGCTGAAATAAAATTCATT | 58.839 | 33.333 | 9.73 | 0.00 | 38.55 | 2.57 |
2540 | 2669 | 6.318628 | ACGTGCGCTGAAATAAAATTCATTA | 58.681 | 32.000 | 9.73 | 0.00 | 38.55 | 1.90 |
2541 | 2670 | 6.468956 | ACGTGCGCTGAAATAAAATTCATTAG | 59.531 | 34.615 | 9.73 | 0.00 | 38.55 | 1.73 |
2542 | 2671 | 6.686679 | CGTGCGCTGAAATAAAATTCATTAGA | 59.313 | 34.615 | 9.73 | 0.00 | 38.55 | 2.10 |
2543 | 2672 | 7.097289 | CGTGCGCTGAAATAAAATTCATTAGAG | 60.097 | 37.037 | 9.73 | 0.00 | 38.55 | 2.43 |
2544 | 2673 | 6.692681 | TGCGCTGAAATAAAATTCATTAGAGC | 59.307 | 34.615 | 9.73 | 0.00 | 38.55 | 4.09 |
2545 | 2674 | 6.692681 | GCGCTGAAATAAAATTCATTAGAGCA | 59.307 | 34.615 | 0.00 | 0.00 | 38.55 | 4.26 |
2546 | 2675 | 7.380602 | GCGCTGAAATAAAATTCATTAGAGCAT | 59.619 | 33.333 | 0.00 | 0.00 | 38.55 | 3.79 |
2547 | 2676 | 8.899776 | CGCTGAAATAAAATTCATTAGAGCATC | 58.100 | 33.333 | 0.00 | 0.00 | 38.55 | 3.91 |
2548 | 2677 | 9.962783 | GCTGAAATAAAATTCATTAGAGCATCT | 57.037 | 29.630 | 0.00 | 0.00 | 42.99 | 2.90 |
2558 | 2687 | 3.490890 | GAGCATCTCCAACACGCC | 58.509 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
2559 | 2688 | 2.045926 | AGCATCTCCAACACGCCC | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 6.13 |
2560 | 2689 | 2.359850 | GCATCTCCAACACGCCCA | 60.360 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
2561 | 2690 | 1.971167 | GCATCTCCAACACGCCCAA | 60.971 | 57.895 | 0.00 | 0.00 | 0.00 | 4.12 |
2562 | 2691 | 1.523154 | GCATCTCCAACACGCCCAAA | 61.523 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2563 | 2692 | 0.240945 | CATCTCCAACACGCCCAAAC | 59.759 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2564 | 2693 | 0.179004 | ATCTCCAACACGCCCAAACA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2565 | 2694 | 1.098712 | TCTCCAACACGCCCAAACAC | 61.099 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2566 | 2695 | 1.077357 | TCCAACACGCCCAAACACT | 60.077 | 52.632 | 0.00 | 0.00 | 0.00 | 3.55 |
2567 | 2696 | 1.065600 | CCAACACGCCCAAACACTG | 59.934 | 57.895 | 0.00 | 0.00 | 0.00 | 3.66 |
2568 | 2697 | 1.065600 | CAACACGCCCAAACACTGG | 59.934 | 57.895 | 0.00 | 0.00 | 45.97 | 4.00 |
2575 | 2704 | 3.977244 | CCAAACACTGGGCCGCAC | 61.977 | 66.667 | 0.00 | 0.00 | 42.17 | 5.34 |
2576 | 2705 | 4.326766 | CAAACACTGGGCCGCACG | 62.327 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
2581 | 2710 | 4.323477 | ACTGGGCCGCACGCTAAA | 62.323 | 61.111 | 0.00 | 0.00 | 37.74 | 1.85 |
2582 | 2711 | 3.053291 | CTGGGCCGCACGCTAAAA | 61.053 | 61.111 | 0.00 | 0.00 | 37.74 | 1.52 |
2583 | 2712 | 2.360600 | TGGGCCGCACGCTAAAAT | 60.361 | 55.556 | 0.00 | 0.00 | 37.74 | 1.82 |
2584 | 2713 | 2.322999 | CTGGGCCGCACGCTAAAATC | 62.323 | 60.000 | 0.00 | 0.00 | 37.74 | 2.17 |
2585 | 2714 | 2.407616 | GGCCGCACGCTAAAATCC | 59.592 | 61.111 | 0.00 | 0.00 | 37.74 | 3.01 |
2586 | 2715 | 2.022762 | GCCGCACGCTAAAATCCG | 59.977 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
2587 | 2716 | 2.707039 | CCGCACGCTAAAATCCGG | 59.293 | 61.111 | 0.00 | 0.00 | 0.00 | 5.14 |
2588 | 2717 | 2.707039 | CGCACGCTAAAATCCGGG | 59.293 | 61.111 | 0.00 | 0.00 | 0.00 | 5.73 |
2589 | 2718 | 2.104253 | CGCACGCTAAAATCCGGGT | 61.104 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
2590 | 2719 | 1.641123 | CGCACGCTAAAATCCGGGTT | 61.641 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
2591 | 2720 | 0.524414 | GCACGCTAAAATCCGGGTTT | 59.476 | 50.000 | 6.94 | 6.94 | 0.00 | 3.27 |
2592 | 2721 | 1.068125 | GCACGCTAAAATCCGGGTTTT | 60.068 | 47.619 | 27.53 | 27.53 | 35.60 | 2.43 |
2593 | 2722 | 2.608506 | GCACGCTAAAATCCGGGTTTTT | 60.609 | 45.455 | 29.34 | 22.04 | 33.62 | 1.94 |
2611 | 2740 | 2.450609 | TTTAGACGCCAGACAGTTCC | 57.549 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2612 | 2741 | 1.334160 | TTAGACGCCAGACAGTTCCA | 58.666 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2613 | 2742 | 0.888619 | TAGACGCCAGACAGTTCCAG | 59.111 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2614 | 2743 | 2.029844 | GACGCCAGACAGTTCCAGC | 61.030 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
2615 | 2744 | 2.031012 | CGCCAGACAGTTCCAGCA | 59.969 | 61.111 | 0.00 | 0.00 | 0.00 | 4.41 |
2616 | 2745 | 1.376424 | CGCCAGACAGTTCCAGCAT | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
2617 | 2746 | 0.108186 | CGCCAGACAGTTCCAGCATA | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.14 |
2618 | 2747 | 1.675714 | CGCCAGACAGTTCCAGCATAA | 60.676 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
2619 | 2748 | 2.012673 | GCCAGACAGTTCCAGCATAAG | 58.987 | 52.381 | 0.00 | 0.00 | 0.00 | 1.73 |
2620 | 2749 | 2.012673 | CCAGACAGTTCCAGCATAAGC | 58.987 | 52.381 | 0.00 | 0.00 | 42.56 | 3.09 |
2638 | 2767 | 1.129809 | CTGTAAAACAGTCCGCGCG | 59.870 | 57.895 | 25.67 | 25.67 | 41.19 | 6.86 |
2639 | 2768 | 1.279527 | CTGTAAAACAGTCCGCGCGA | 61.280 | 55.000 | 34.63 | 15.16 | 41.19 | 5.87 |
2640 | 2769 | 0.875040 | TGTAAAACAGTCCGCGCGAA | 60.875 | 50.000 | 34.63 | 8.78 | 0.00 | 4.70 |
2641 | 2770 | 0.232816 | GTAAAACAGTCCGCGCGAAA | 59.767 | 50.000 | 34.63 | 16.85 | 0.00 | 3.46 |
2642 | 2771 | 0.935898 | TAAAACAGTCCGCGCGAAAA | 59.064 | 45.000 | 34.63 | 13.87 | 0.00 | 2.29 |
2643 | 2772 | 0.099082 | AAAACAGTCCGCGCGAAAAA | 59.901 | 45.000 | 34.63 | 10.96 | 0.00 | 1.94 |
2660 | 2789 | 1.176838 | AAAATAAATTCGACGCGCGC | 58.823 | 45.000 | 32.58 | 23.91 | 40.61 | 6.86 |
2661 | 2790 | 0.372334 | AAATAAATTCGACGCGCGCT | 59.628 | 45.000 | 32.58 | 17.75 | 40.61 | 5.92 |
2662 | 2791 | 0.315059 | AATAAATTCGACGCGCGCTG | 60.315 | 50.000 | 32.58 | 22.90 | 40.61 | 5.18 |
2663 | 2792 | 1.143373 | ATAAATTCGACGCGCGCTGA | 61.143 | 50.000 | 32.58 | 25.01 | 40.61 | 4.26 |
2664 | 2793 | 1.345660 | TAAATTCGACGCGCGCTGAA | 61.346 | 50.000 | 30.68 | 30.68 | 40.61 | 3.02 |
2665 | 2794 | 2.165362 | AAATTCGACGCGCGCTGAAA | 62.165 | 50.000 | 31.69 | 21.34 | 40.61 | 2.69 |
2666 | 2795 | 2.165362 | AATTCGACGCGCGCTGAAAA | 62.165 | 50.000 | 31.69 | 19.80 | 40.61 | 2.29 |
2667 | 2796 | 2.165362 | ATTCGACGCGCGCTGAAAAA | 62.165 | 50.000 | 31.69 | 18.57 | 40.61 | 1.94 |
2668 | 2797 | 3.150485 | CGACGCGCGCTGAAAAAC | 61.150 | 61.111 | 32.58 | 9.94 | 0.00 | 2.43 |
2669 | 2798 | 3.150485 | GACGCGCGCTGAAAAACG | 61.150 | 61.111 | 32.58 | 13.34 | 0.00 | 3.60 |
2680 | 2809 | 5.101137 | CGCTGAAAAACGCTATTAAAAGC | 57.899 | 39.130 | 0.00 | 0.00 | 39.21 | 3.51 |
2681 | 2810 | 4.851558 | CGCTGAAAAACGCTATTAAAAGCT | 59.148 | 37.500 | 0.00 | 0.00 | 40.49 | 3.74 |
2682 | 2811 | 5.219841 | CGCTGAAAAACGCTATTAAAAGCTG | 60.220 | 40.000 | 0.00 | 0.00 | 40.49 | 4.24 |
2683 | 2812 | 5.629435 | GCTGAAAAACGCTATTAAAAGCTGT | 59.371 | 36.000 | 0.00 | 0.00 | 40.49 | 4.40 |
2684 | 2813 | 6.799925 | GCTGAAAAACGCTATTAAAAGCTGTA | 59.200 | 34.615 | 0.00 | 0.00 | 40.49 | 2.74 |
2685 | 2814 | 7.325097 | GCTGAAAAACGCTATTAAAAGCTGTAA | 59.675 | 33.333 | 0.00 | 0.00 | 40.49 | 2.41 |
2686 | 2815 | 9.176181 | CTGAAAAACGCTATTAAAAGCTGTAAA | 57.824 | 29.630 | 0.00 | 0.00 | 40.49 | 2.01 |
2687 | 2816 | 9.685828 | TGAAAAACGCTATTAAAAGCTGTAAAT | 57.314 | 25.926 | 0.00 | 0.00 | 40.49 | 1.40 |
2691 | 2820 | 9.685828 | AAACGCTATTAAAAGCTGTAAATTTGA | 57.314 | 25.926 | 0.00 | 0.00 | 40.49 | 2.69 |
2692 | 2821 | 8.895932 | ACGCTATTAAAAGCTGTAAATTTGAG | 57.104 | 30.769 | 0.00 | 0.00 | 40.49 | 3.02 |
2693 | 2822 | 7.968405 | ACGCTATTAAAAGCTGTAAATTTGAGG | 59.032 | 33.333 | 0.00 | 0.00 | 40.49 | 3.86 |
2694 | 2823 | 7.044052 | CGCTATTAAAAGCTGTAAATTTGAGGC | 60.044 | 37.037 | 0.00 | 2.23 | 40.49 | 4.70 |
2695 | 2824 | 7.044052 | GCTATTAAAAGCTGTAAATTTGAGGCG | 60.044 | 37.037 | 0.00 | 0.00 | 39.50 | 5.52 |
2696 | 2825 | 4.584327 | AAAAGCTGTAAATTTGAGGCGT | 57.416 | 36.364 | 0.00 | 0.00 | 0.00 | 5.68 |
2697 | 2826 | 3.831715 | AAGCTGTAAATTTGAGGCGTC | 57.168 | 42.857 | 0.00 | 0.00 | 0.00 | 5.19 |
2698 | 2827 | 1.732259 | AGCTGTAAATTTGAGGCGTCG | 59.268 | 47.619 | 0.00 | 0.00 | 0.00 | 5.12 |
2699 | 2828 | 1.202031 | GCTGTAAATTTGAGGCGTCGG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2700 | 2829 | 2.343101 | CTGTAAATTTGAGGCGTCGGA | 58.657 | 47.619 | 0.00 | 0.00 | 0.00 | 4.55 |
2701 | 2830 | 2.936498 | CTGTAAATTTGAGGCGTCGGAT | 59.064 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
2702 | 2831 | 2.933906 | TGTAAATTTGAGGCGTCGGATC | 59.066 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
2703 | 2832 | 2.107950 | AAATTTGAGGCGTCGGATCA | 57.892 | 45.000 | 1.39 | 0.00 | 0.00 | 2.92 |
2704 | 2833 | 2.332063 | AATTTGAGGCGTCGGATCAT | 57.668 | 45.000 | 1.39 | 0.00 | 0.00 | 2.45 |
2705 | 2834 | 1.586422 | ATTTGAGGCGTCGGATCATG | 58.414 | 50.000 | 1.39 | 0.00 | 0.00 | 3.07 |
2706 | 2835 | 1.089481 | TTTGAGGCGTCGGATCATGC | 61.089 | 55.000 | 1.39 | 0.00 | 0.00 | 4.06 |
2707 | 2836 | 3.032609 | GAGGCGTCGGATCATGCG | 61.033 | 66.667 | 0.00 | 0.00 | 0.00 | 4.73 |
2712 | 2841 | 3.264897 | GTCGGATCATGCGCGCTT | 61.265 | 61.111 | 33.29 | 24.21 | 0.00 | 4.68 |
2713 | 2842 | 2.961721 | TCGGATCATGCGCGCTTC | 60.962 | 61.111 | 33.29 | 21.53 | 0.00 | 3.86 |
2714 | 2843 | 3.264159 | CGGATCATGCGCGCTTCA | 61.264 | 61.111 | 33.29 | 14.05 | 0.00 | 3.02 |
2715 | 2844 | 2.325857 | GGATCATGCGCGCTTCAC | 59.674 | 61.111 | 33.29 | 18.33 | 0.00 | 3.18 |
2716 | 2845 | 2.463620 | GGATCATGCGCGCTTCACA | 61.464 | 57.895 | 33.29 | 12.29 | 0.00 | 3.58 |
2717 | 2846 | 1.425031 | GATCATGCGCGCTTCACAA | 59.575 | 52.632 | 33.29 | 11.41 | 0.00 | 3.33 |
2718 | 2847 | 0.028505 | GATCATGCGCGCTTCACAAT | 59.971 | 50.000 | 33.29 | 13.53 | 0.00 | 2.71 |
2719 | 2848 | 0.452987 | ATCATGCGCGCTTCACAATT | 59.547 | 45.000 | 33.29 | 5.90 | 0.00 | 2.32 |
2720 | 2849 | 0.240678 | TCATGCGCGCTTCACAATTT | 59.759 | 45.000 | 33.29 | 2.56 | 0.00 | 1.82 |
2721 | 2850 | 1.466558 | TCATGCGCGCTTCACAATTTA | 59.533 | 42.857 | 33.29 | 7.91 | 0.00 | 1.40 |
2722 | 2851 | 1.578915 | CATGCGCGCTTCACAATTTAC | 59.421 | 47.619 | 33.29 | 0.00 | 0.00 | 2.01 |
2723 | 2852 | 0.588737 | TGCGCGCTTCACAATTTACA | 59.411 | 45.000 | 33.29 | 3.26 | 0.00 | 2.41 |
2724 | 2853 | 0.974836 | GCGCGCTTCACAATTTACAC | 59.025 | 50.000 | 26.67 | 0.00 | 0.00 | 2.90 |
2725 | 2854 | 1.399727 | GCGCGCTTCACAATTTACACT | 60.400 | 47.619 | 26.67 | 0.00 | 0.00 | 3.55 |
2726 | 2855 | 2.233355 | CGCGCTTCACAATTTACACTG | 58.767 | 47.619 | 5.56 | 0.00 | 0.00 | 3.66 |
2727 | 2856 | 1.978782 | GCGCTTCACAATTTACACTGC | 59.021 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2728 | 2857 | 2.604373 | GCGCTTCACAATTTACACTGCA | 60.604 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
2729 | 2858 | 3.825308 | CGCTTCACAATTTACACTGCAT | 58.175 | 40.909 | 0.00 | 0.00 | 0.00 | 3.96 |
2730 | 2859 | 3.605056 | CGCTTCACAATTTACACTGCATG | 59.395 | 43.478 | 0.00 | 0.00 | 0.00 | 4.06 |
2731 | 2860 | 4.549458 | GCTTCACAATTTACACTGCATGT | 58.451 | 39.130 | 6.93 | 6.93 | 46.06 | 3.21 |
2732 | 2861 | 4.984161 | GCTTCACAATTTACACTGCATGTT | 59.016 | 37.500 | 7.02 | 0.00 | 43.19 | 2.71 |
2733 | 2862 | 5.117592 | GCTTCACAATTTACACTGCATGTTC | 59.882 | 40.000 | 7.02 | 0.00 | 43.19 | 3.18 |
2734 | 2863 | 6.389830 | TTCACAATTTACACTGCATGTTCT | 57.610 | 33.333 | 7.02 | 0.00 | 43.19 | 3.01 |
2735 | 2864 | 6.000891 | TCACAATTTACACTGCATGTTCTC | 57.999 | 37.500 | 7.02 | 0.00 | 43.19 | 2.87 |
2736 | 2865 | 5.764686 | TCACAATTTACACTGCATGTTCTCT | 59.235 | 36.000 | 7.02 | 0.00 | 43.19 | 3.10 |
2737 | 2866 | 6.262944 | TCACAATTTACACTGCATGTTCTCTT | 59.737 | 34.615 | 7.02 | 0.00 | 43.19 | 2.85 |
2738 | 2867 | 6.361481 | CACAATTTACACTGCATGTTCTCTTG | 59.639 | 38.462 | 7.02 | 8.47 | 43.19 | 3.02 |
2739 | 2868 | 6.039717 | ACAATTTACACTGCATGTTCTCTTGT | 59.960 | 34.615 | 7.02 | 8.91 | 43.19 | 3.16 |
2740 | 2869 | 5.422666 | TTTACACTGCATGTTCTCTTGTG | 57.577 | 39.130 | 7.02 | 1.87 | 43.19 | 3.33 |
2741 | 2870 | 1.605710 | ACACTGCATGTTCTCTTGTGC | 59.394 | 47.619 | 0.00 | 0.00 | 38.98 | 4.57 |
2742 | 2871 | 0.870393 | ACTGCATGTTCTCTTGTGCG | 59.130 | 50.000 | 0.00 | 0.00 | 40.34 | 5.34 |
2743 | 2872 | 0.453950 | CTGCATGTTCTCTTGTGCGC | 60.454 | 55.000 | 0.00 | 0.00 | 40.34 | 6.09 |
2744 | 2873 | 1.510623 | GCATGTTCTCTTGTGCGCG | 60.511 | 57.895 | 0.00 | 0.00 | 0.00 | 6.86 |
2745 | 2874 | 1.510623 | CATGTTCTCTTGTGCGCGC | 60.511 | 57.895 | 27.26 | 27.26 | 0.00 | 6.86 |
2746 | 2875 | 3.015293 | ATGTTCTCTTGTGCGCGCG | 62.015 | 57.895 | 28.44 | 28.44 | 0.00 | 6.86 |
2747 | 2876 | 3.702555 | GTTCTCTTGTGCGCGCGT | 61.703 | 61.111 | 32.35 | 0.00 | 0.00 | 6.01 |
2748 | 2877 | 2.964925 | TTCTCTTGTGCGCGCGTT | 60.965 | 55.556 | 32.35 | 0.00 | 0.00 | 4.84 |
2749 | 2878 | 2.530497 | TTCTCTTGTGCGCGCGTTT | 61.530 | 52.632 | 32.35 | 0.00 | 0.00 | 3.60 |
2750 | 2879 | 2.042520 | TTCTCTTGTGCGCGCGTTTT | 62.043 | 50.000 | 32.35 | 0.00 | 0.00 | 2.43 |
2751 | 2880 | 1.654137 | CTCTTGTGCGCGCGTTTTT | 60.654 | 52.632 | 32.35 | 0.00 | 0.00 | 1.94 |
2752 | 2881 | 1.855004 | CTCTTGTGCGCGCGTTTTTG | 61.855 | 55.000 | 32.35 | 18.43 | 0.00 | 2.44 |
2753 | 2882 | 1.936880 | CTTGTGCGCGCGTTTTTGA | 60.937 | 52.632 | 32.35 | 11.74 | 0.00 | 2.69 |
2754 | 2883 | 1.467556 | CTTGTGCGCGCGTTTTTGAA | 61.468 | 50.000 | 32.35 | 14.09 | 0.00 | 2.69 |
2755 | 2884 | 1.734359 | TTGTGCGCGCGTTTTTGAAC | 61.734 | 50.000 | 32.35 | 16.62 | 0.00 | 3.18 |
2756 | 2885 | 2.100410 | TGCGCGCGTTTTTGAACA | 59.900 | 50.000 | 32.35 | 15.16 | 0.00 | 3.18 |
2757 | 2886 | 1.298713 | TGCGCGCGTTTTTGAACAT | 60.299 | 47.368 | 32.35 | 0.00 | 0.00 | 2.71 |
2758 | 2887 | 1.265462 | TGCGCGCGTTTTTGAACATC | 61.265 | 50.000 | 32.35 | 10.25 | 0.00 | 3.06 |
2759 | 2888 | 0.996727 | GCGCGCGTTTTTGAACATCT | 60.997 | 50.000 | 32.35 | 0.00 | 0.00 | 2.90 |
2760 | 2889 | 0.697010 | CGCGCGTTTTTGAACATCTG | 59.303 | 50.000 | 24.19 | 0.00 | 0.00 | 2.90 |
2761 | 2890 | 0.430858 | GCGCGTTTTTGAACATCTGC | 59.569 | 50.000 | 8.43 | 0.00 | 0.00 | 4.26 |
2762 | 2891 | 1.925946 | GCGCGTTTTTGAACATCTGCT | 60.926 | 47.619 | 8.43 | 0.00 | 0.00 | 4.24 |
2763 | 2892 | 2.384382 | CGCGTTTTTGAACATCTGCTT | 58.616 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
2764 | 2893 | 3.550561 | CGCGTTTTTGAACATCTGCTTA | 58.449 | 40.909 | 0.00 | 0.00 | 0.00 | 3.09 |
2765 | 2894 | 3.971871 | CGCGTTTTTGAACATCTGCTTAA | 59.028 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
2766 | 2895 | 4.087085 | CGCGTTTTTGAACATCTGCTTAAG | 59.913 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
2767 | 2896 | 4.143535 | GCGTTTTTGAACATCTGCTTAAGC | 60.144 | 41.667 | 20.84 | 20.84 | 42.50 | 3.09 |
2780 | 2909 | 1.334869 | GCTTAAGCAATGATGGGTCCG | 59.665 | 52.381 | 22.59 | 0.00 | 41.59 | 4.79 |
2781 | 2910 | 1.949525 | CTTAAGCAATGATGGGTCCGG | 59.050 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
2782 | 2911 | 0.465460 | TAAGCAATGATGGGTCCGGC | 60.465 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2783 | 2912 | 3.585990 | GCAATGATGGGTCCGGCG | 61.586 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
2784 | 2913 | 2.124736 | CAATGATGGGTCCGGCGT | 60.125 | 61.111 | 6.01 | 0.00 | 0.00 | 5.68 |
2785 | 2914 | 1.145156 | CAATGATGGGTCCGGCGTA | 59.855 | 57.895 | 6.01 | 0.00 | 0.00 | 4.42 |
2786 | 2915 | 1.145377 | AATGATGGGTCCGGCGTAC | 59.855 | 57.895 | 6.01 | 0.00 | 0.00 | 3.67 |
2787 | 2916 | 1.335132 | AATGATGGGTCCGGCGTACT | 61.335 | 55.000 | 6.01 | 0.00 | 0.00 | 2.73 |
2788 | 2917 | 0.468585 | ATGATGGGTCCGGCGTACTA | 60.469 | 55.000 | 6.01 | 0.00 | 0.00 | 1.82 |
2789 | 2918 | 0.683828 | TGATGGGTCCGGCGTACTAA | 60.684 | 55.000 | 6.01 | 0.00 | 0.00 | 2.24 |
2790 | 2919 | 0.461135 | GATGGGTCCGGCGTACTAAA | 59.539 | 55.000 | 6.01 | 0.00 | 0.00 | 1.85 |
2791 | 2920 | 0.903942 | ATGGGTCCGGCGTACTAAAA | 59.096 | 50.000 | 6.01 | 0.00 | 0.00 | 1.52 |
2792 | 2921 | 0.247185 | TGGGTCCGGCGTACTAAAAG | 59.753 | 55.000 | 6.01 | 0.00 | 0.00 | 2.27 |
2793 | 2922 | 0.247460 | GGGTCCGGCGTACTAAAAGT | 59.753 | 55.000 | 6.01 | 0.00 | 0.00 | 2.66 |
2794 | 2923 | 1.353076 | GGTCCGGCGTACTAAAAGTG | 58.647 | 55.000 | 6.01 | 0.00 | 0.00 | 3.16 |
2795 | 2924 | 0.717784 | GTCCGGCGTACTAAAAGTGC | 59.282 | 55.000 | 6.01 | 0.00 | 0.00 | 4.40 |
2796 | 2925 | 0.604578 | TCCGGCGTACTAAAAGTGCT | 59.395 | 50.000 | 6.01 | 0.00 | 0.00 | 4.40 |
2797 | 2926 | 1.818060 | TCCGGCGTACTAAAAGTGCTA | 59.182 | 47.619 | 6.01 | 0.00 | 0.00 | 3.49 |
2798 | 2927 | 1.922545 | CCGGCGTACTAAAAGTGCTAC | 59.077 | 52.381 | 6.01 | 0.00 | 0.00 | 3.58 |
2799 | 2928 | 2.598589 | CGGCGTACTAAAAGTGCTACA | 58.401 | 47.619 | 0.00 | 0.00 | 0.00 | 2.74 |
2800 | 2929 | 2.597305 | CGGCGTACTAAAAGTGCTACAG | 59.403 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2801 | 2930 | 3.582780 | GGCGTACTAAAAGTGCTACAGT | 58.417 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
2802 | 2931 | 3.367025 | GGCGTACTAAAAGTGCTACAGTG | 59.633 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
2803 | 2932 | 3.367025 | GCGTACTAAAAGTGCTACAGTGG | 59.633 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
2804 | 2933 | 3.367025 | CGTACTAAAAGTGCTACAGTGGC | 59.633 | 47.826 | 0.99 | 0.99 | 0.00 | 5.01 |
2805 | 2934 | 2.413837 | ACTAAAAGTGCTACAGTGGCG | 58.586 | 47.619 | 4.21 | 0.00 | 0.00 | 5.69 |
2806 | 2935 | 1.128692 | CTAAAAGTGCTACAGTGGCGC | 59.871 | 52.381 | 14.31 | 14.31 | 40.08 | 6.53 |
2807 | 2936 | 1.841663 | AAAAGTGCTACAGTGGCGCG | 61.842 | 55.000 | 15.94 | 0.00 | 43.87 | 6.86 |
2810 | 2939 | 3.754530 | TGCTACAGTGGCGCGCTA | 61.755 | 61.111 | 32.29 | 24.64 | 0.00 | 4.26 |
2811 | 2940 | 2.508439 | GCTACAGTGGCGCGCTAA | 60.508 | 61.111 | 32.29 | 17.34 | 0.00 | 3.09 |
2812 | 2941 | 2.098233 | GCTACAGTGGCGCGCTAAA | 61.098 | 57.895 | 32.29 | 14.50 | 0.00 | 1.85 |
2813 | 2942 | 1.632046 | GCTACAGTGGCGCGCTAAAA | 61.632 | 55.000 | 32.29 | 11.71 | 0.00 | 1.52 |
2814 | 2943 | 0.094730 | CTACAGTGGCGCGCTAAAAC | 59.905 | 55.000 | 32.29 | 22.40 | 0.00 | 2.43 |
2815 | 2944 | 0.320073 | TACAGTGGCGCGCTAAAACT | 60.320 | 50.000 | 32.29 | 24.17 | 0.00 | 2.66 |
2816 | 2945 | 0.320073 | ACAGTGGCGCGCTAAAACTA | 60.320 | 50.000 | 32.29 | 5.94 | 0.00 | 2.24 |
2817 | 2946 | 1.006832 | CAGTGGCGCGCTAAAACTAT | 58.993 | 50.000 | 32.29 | 4.36 | 0.00 | 2.12 |
2818 | 2947 | 1.396996 | CAGTGGCGCGCTAAAACTATT | 59.603 | 47.619 | 32.29 | 6.16 | 0.00 | 1.73 |
2819 | 2948 | 2.081462 | AGTGGCGCGCTAAAACTATTT | 58.919 | 42.857 | 32.29 | 5.82 | 0.00 | 1.40 |
2820 | 2949 | 2.486592 | AGTGGCGCGCTAAAACTATTTT | 59.513 | 40.909 | 32.29 | 5.46 | 36.67 | 1.82 |
2821 | 2950 | 3.685756 | AGTGGCGCGCTAAAACTATTTTA | 59.314 | 39.130 | 32.29 | 0.00 | 34.19 | 1.52 |
2830 | 2959 | 5.494632 | CTAAAACTATTTTAGGGCACGGG | 57.505 | 43.478 | 11.59 | 0.00 | 45.21 | 5.28 |
2831 | 2960 | 3.724732 | AAACTATTTTAGGGCACGGGA | 57.275 | 42.857 | 0.00 | 0.00 | 0.00 | 5.14 |
2832 | 2961 | 3.945640 | AACTATTTTAGGGCACGGGAT | 57.054 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
2833 | 2962 | 3.945640 | ACTATTTTAGGGCACGGGATT | 57.054 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
2834 | 2963 | 4.245251 | ACTATTTTAGGGCACGGGATTT | 57.755 | 40.909 | 0.00 | 0.00 | 0.00 | 2.17 |
2835 | 2964 | 4.606210 | ACTATTTTAGGGCACGGGATTTT | 58.394 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
2836 | 2965 | 5.020795 | ACTATTTTAGGGCACGGGATTTTT | 58.979 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
2837 | 2966 | 3.669251 | TTTTAGGGCACGGGATTTTTG | 57.331 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
2838 | 2967 | 2.296073 | TTAGGGCACGGGATTTTTGT | 57.704 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2839 | 2968 | 1.540267 | TAGGGCACGGGATTTTTGTG | 58.460 | 50.000 | 0.00 | 0.00 | 36.70 | 3.33 |
2843 | 2972 | 3.193471 | CACGGGATTTTTGTGCACC | 57.807 | 52.632 | 15.69 | 0.00 | 0.00 | 5.01 |
2844 | 2973 | 0.673437 | CACGGGATTTTTGTGCACCT | 59.327 | 50.000 | 15.69 | 0.00 | 0.00 | 4.00 |
2845 | 2974 | 0.673437 | ACGGGATTTTTGTGCACCTG | 59.327 | 50.000 | 15.69 | 4.32 | 0.00 | 4.00 |
2846 | 2975 | 0.667184 | CGGGATTTTTGTGCACCTGC | 60.667 | 55.000 | 15.69 | 0.00 | 42.50 | 4.85 |
2847 | 2976 | 0.681175 | GGGATTTTTGTGCACCTGCT | 59.319 | 50.000 | 15.69 | 0.00 | 42.66 | 4.24 |
2848 | 2977 | 1.606224 | GGGATTTTTGTGCACCTGCTG | 60.606 | 52.381 | 15.69 | 0.00 | 42.66 | 4.41 |
2849 | 2978 | 1.606224 | GGATTTTTGTGCACCTGCTGG | 60.606 | 52.381 | 15.69 | 8.29 | 42.66 | 4.85 |
2850 | 2979 | 1.340889 | GATTTTTGTGCACCTGCTGGA | 59.659 | 47.619 | 17.64 | 0.00 | 42.66 | 3.86 |
2851 | 2980 | 0.746063 | TTTTTGTGCACCTGCTGGAG | 59.254 | 50.000 | 17.64 | 9.86 | 42.66 | 3.86 |
2852 | 2981 | 0.106769 | TTTTGTGCACCTGCTGGAGA | 60.107 | 50.000 | 17.64 | 0.00 | 42.66 | 3.71 |
2853 | 2982 | 0.111061 | TTTGTGCACCTGCTGGAGAT | 59.889 | 50.000 | 17.64 | 0.00 | 42.66 | 2.75 |
2854 | 2983 | 0.607217 | TTGTGCACCTGCTGGAGATG | 60.607 | 55.000 | 17.64 | 5.49 | 42.66 | 2.90 |
2855 | 2984 | 2.045634 | TGCACCTGCTGGAGATGC | 60.046 | 61.111 | 17.64 | 8.80 | 42.66 | 3.91 |
2856 | 2985 | 2.271497 | GCACCTGCTGGAGATGCT | 59.729 | 61.111 | 17.64 | 0.00 | 38.21 | 3.79 |
2857 | 2986 | 1.818785 | GCACCTGCTGGAGATGCTC | 60.819 | 63.158 | 17.64 | 0.00 | 38.21 | 4.26 |
2981 | 3248 | 8.593945 | AAGCATGAAGAACCCTATAAAATTGA | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
2984 | 3251 | 7.917505 | GCATGAAGAACCCTATAAAATTGACAG | 59.082 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
3263 | 3536 | 5.360999 | ACTTTTCCCCAAGTTTCTTCTTCTG | 59.639 | 40.000 | 0.00 | 0.00 | 32.81 | 3.02 |
3299 | 3572 | 6.822676 | AGCAATGCCTCTATTCATTCTATAGC | 59.177 | 38.462 | 0.00 | 0.00 | 31.15 | 2.97 |
3300 | 3573 | 6.822676 | GCAATGCCTCTATTCATTCTATAGCT | 59.177 | 38.462 | 0.00 | 0.00 | 31.15 | 3.32 |
3301 | 3574 | 7.336427 | GCAATGCCTCTATTCATTCTATAGCTT | 59.664 | 37.037 | 0.00 | 0.00 | 31.15 | 3.74 |
3302 | 3575 | 9.881649 | CAATGCCTCTATTCATTCTATAGCTTA | 57.118 | 33.333 | 0.00 | 0.00 | 31.15 | 3.09 |
3304 | 3577 | 8.885693 | TGCCTCTATTCATTCTATAGCTTAGA | 57.114 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
3507 | 3792 | 8.540507 | AGTTATGGACTACATACAGACTGAAT | 57.459 | 34.615 | 10.08 | 0.00 | 41.61 | 2.57 |
3508 | 3793 | 8.417106 | AGTTATGGACTACATACAGACTGAATG | 58.583 | 37.037 | 10.08 | 0.00 | 41.61 | 2.67 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
50 | 51 | 1.207329 | GAGTAAGTCCCGTGCCAGAAT | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
51 | 52 | 0.606604 | GAGTAAGTCCCGTGCCAGAA | 59.393 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
52 | 53 | 0.541063 | TGAGTAAGTCCCGTGCCAGA | 60.541 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
54 | 55 | 1.541310 | CCTGAGTAAGTCCCGTGCCA | 61.541 | 60.000 | 0.00 | 0.00 | 0.00 | 4.92 |
55 | 56 | 1.218316 | CCTGAGTAAGTCCCGTGCC | 59.782 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
56 | 57 | 1.448013 | GCCTGAGTAAGTCCCGTGC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 5.34 |
57 | 58 | 1.153823 | CGCCTGAGTAAGTCCCGTG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
58 | 59 | 1.303888 | TCGCCTGAGTAAGTCCCGT | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
59 | 60 | 1.433879 | CTCGCCTGAGTAAGTCCCG | 59.566 | 63.158 | 0.00 | 0.00 | 37.46 | 5.14 |
60 | 61 | 1.142097 | GCTCGCCTGAGTAAGTCCC | 59.858 | 63.158 | 0.00 | 0.00 | 44.48 | 4.46 |
61 | 62 | 0.179124 | CTGCTCGCCTGAGTAAGTCC | 60.179 | 60.000 | 0.00 | 0.00 | 44.48 | 3.85 |
62 | 63 | 0.811915 | TCTGCTCGCCTGAGTAAGTC | 59.188 | 55.000 | 0.00 | 0.00 | 44.48 | 3.01 |
63 | 64 | 1.257743 | TTCTGCTCGCCTGAGTAAGT | 58.742 | 50.000 | 0.00 | 0.00 | 44.48 | 2.24 |
64 | 65 | 2.370281 | TTTCTGCTCGCCTGAGTAAG | 57.630 | 50.000 | 0.00 | 0.00 | 44.48 | 2.34 |
65 | 66 | 2.299013 | TCTTTTCTGCTCGCCTGAGTAA | 59.701 | 45.455 | 0.00 | 0.00 | 44.48 | 2.24 |
66 | 67 | 1.893137 | TCTTTTCTGCTCGCCTGAGTA | 59.107 | 47.619 | 0.00 | 0.00 | 44.48 | 2.59 |
67 | 68 | 0.681733 | TCTTTTCTGCTCGCCTGAGT | 59.318 | 50.000 | 0.00 | 0.00 | 44.48 | 3.41 |
68 | 69 | 1.462670 | GTTCTTTTCTGCTCGCCTGAG | 59.537 | 52.381 | 0.00 | 0.00 | 45.49 | 3.35 |
69 | 70 | 1.512926 | GTTCTTTTCTGCTCGCCTGA | 58.487 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
70 | 71 | 0.164647 | CGTTCTTTTCTGCTCGCCTG | 59.835 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
71 | 72 | 0.951040 | CCGTTCTTTTCTGCTCGCCT | 60.951 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
72 | 73 | 1.497722 | CCGTTCTTTTCTGCTCGCC | 59.502 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
73 | 74 | 1.497722 | CCCGTTCTTTTCTGCTCGC | 59.502 | 57.895 | 0.00 | 0.00 | 0.00 | 5.03 |
74 | 75 | 1.497722 | GCCCGTTCTTTTCTGCTCG | 59.502 | 57.895 | 0.00 | 0.00 | 0.00 | 5.03 |
75 | 76 | 1.228657 | ACGCCCGTTCTTTTCTGCTC | 61.229 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
76 | 77 | 1.227853 | ACGCCCGTTCTTTTCTGCT | 60.228 | 52.632 | 0.00 | 0.00 | 0.00 | 4.24 |
77 | 78 | 1.082104 | CACGCCCGTTCTTTTCTGC | 60.082 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
78 | 79 | 1.156736 | ATCACGCCCGTTCTTTTCTG | 58.843 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
79 | 80 | 1.804748 | GAATCACGCCCGTTCTTTTCT | 59.195 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
80 | 81 | 1.463528 | CGAATCACGCCCGTTCTTTTC | 60.464 | 52.381 | 0.00 | 0.00 | 34.51 | 2.29 |
81 | 82 | 0.515564 | CGAATCACGCCCGTTCTTTT | 59.484 | 50.000 | 0.00 | 0.00 | 34.51 | 2.27 |
82 | 83 | 0.320073 | TCGAATCACGCCCGTTCTTT | 60.320 | 50.000 | 0.00 | 0.00 | 42.26 | 2.52 |
83 | 84 | 1.012486 | GTCGAATCACGCCCGTTCTT | 61.012 | 55.000 | 0.00 | 0.00 | 42.26 | 2.52 |
84 | 85 | 1.445582 | GTCGAATCACGCCCGTTCT | 60.446 | 57.895 | 0.00 | 0.00 | 42.26 | 3.01 |
85 | 86 | 2.785105 | CGTCGAATCACGCCCGTTC | 61.785 | 63.158 | 0.00 | 0.00 | 42.26 | 3.95 |
86 | 87 | 2.552585 | ATCGTCGAATCACGCCCGTT | 62.553 | 55.000 | 0.00 | 0.00 | 39.74 | 4.44 |
87 | 88 | 2.931713 | GATCGTCGAATCACGCCCGT | 62.932 | 60.000 | 0.00 | 0.00 | 39.74 | 5.28 |
88 | 89 | 2.278596 | ATCGTCGAATCACGCCCG | 60.279 | 61.111 | 0.00 | 0.00 | 39.74 | 6.13 |
89 | 90 | 0.597637 | ATGATCGTCGAATCACGCCC | 60.598 | 55.000 | 0.00 | 0.00 | 38.43 | 6.13 |
90 | 91 | 0.504384 | CATGATCGTCGAATCACGCC | 59.496 | 55.000 | 0.00 | 0.00 | 38.43 | 5.68 |
91 | 92 | 1.449789 | CTCATGATCGTCGAATCACGC | 59.550 | 52.381 | 0.00 | 0.00 | 38.43 | 5.34 |
92 | 93 | 2.987046 | TCTCATGATCGTCGAATCACG | 58.013 | 47.619 | 0.00 | 0.00 | 38.43 | 4.35 |
93 | 94 | 3.181377 | GCTTCTCATGATCGTCGAATCAC | 59.819 | 47.826 | 0.00 | 0.00 | 38.43 | 3.06 |
99 | 100 | 0.936764 | CCCGCTTCTCATGATCGTCG | 60.937 | 60.000 | 0.00 | 0.00 | 0.00 | 5.12 |
107 | 108 | 0.105039 | GATTCCGTCCCGCTTCTCAT | 59.895 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
153 | 154 | 3.256631 | ACCAAACACATCAGGAAGCATTC | 59.743 | 43.478 | 0.00 | 0.00 | 46.67 | 2.67 |
156 | 157 | 2.363306 | ACCAAACACATCAGGAAGCA | 57.637 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
307 | 314 | 6.717289 | AGTAGTTGGGCATAATAAGTTCACA | 58.283 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
322 | 329 | 6.661777 | AGACTAAGGAGTAGTAGTAGTTGGG | 58.338 | 44.000 | 0.00 | 0.00 | 43.45 | 4.12 |
323 | 330 | 8.263640 | TGTAGACTAAGGAGTAGTAGTAGTTGG | 58.736 | 40.741 | 0.00 | 0.00 | 43.45 | 3.77 |
385 | 392 | 9.802039 | TGTTTGTTCCCTTATTTTAGTCTGTAT | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
386 | 393 | 9.059260 | GTGTTTGTTCCCTTATTTTAGTCTGTA | 57.941 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
387 | 394 | 7.558444 | TGTGTTTGTTCCCTTATTTTAGTCTGT | 59.442 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
388 | 395 | 7.860872 | GTGTGTTTGTTCCCTTATTTTAGTCTG | 59.139 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
389 | 396 | 7.558444 | TGTGTGTTTGTTCCCTTATTTTAGTCT | 59.442 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
401 | 409 | 4.693095 | ACATGTTTTTGTGTGTTTGTTCCC | 59.307 | 37.500 | 0.00 | 0.00 | 0.00 | 3.97 |
554 | 574 | 4.495690 | TTGGACGGATTTATCACCATGA | 57.504 | 40.909 | 0.00 | 0.00 | 0.00 | 3.07 |
557 | 577 | 3.009695 | AGGTTTGGACGGATTTATCACCA | 59.990 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
558 | 578 | 3.617284 | AGGTTTGGACGGATTTATCACC | 58.383 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
631 | 665 | 4.081406 | TGCATACAAAGGCTCAATCAAGT | 58.919 | 39.130 | 0.00 | 0.00 | 32.35 | 3.16 |
663 | 727 | 8.089115 | AGAAGCAAAGTTATGTACAAGAAGAC | 57.911 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
707 | 771 | 9.998106 | ACAGTTTTATAGTAGAAGAGAAGCAAA | 57.002 | 29.630 | 0.00 | 0.00 | 0.00 | 3.68 |
708 | 772 | 9.424319 | CACAGTTTTATAGTAGAAGAGAAGCAA | 57.576 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
709 | 773 | 7.545965 | GCACAGTTTTATAGTAGAAGAGAAGCA | 59.454 | 37.037 | 0.00 | 0.00 | 0.00 | 3.91 |
710 | 774 | 7.762159 | AGCACAGTTTTATAGTAGAAGAGAAGC | 59.238 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
713 | 777 | 8.396390 | CGTAGCACAGTTTTATAGTAGAAGAGA | 58.604 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
714 | 778 | 8.549777 | CGTAGCACAGTTTTATAGTAGAAGAG | 57.450 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
740 | 804 | 5.873179 | TTTTCCAAGAGTAACGCTAATGG | 57.127 | 39.130 | 0.00 | 0.00 | 35.48 | 3.16 |
769 | 833 | 6.742559 | TCCTATTAGTAAACCCATCTGGAC | 57.257 | 41.667 | 0.00 | 0.00 | 37.39 | 4.02 |
774 | 838 | 6.645415 | CGTGTCATCCTATTAGTAAACCCATC | 59.355 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
797 | 861 | 2.676342 | GCTCAATTTTGTACCGGATCGT | 59.324 | 45.455 | 9.46 | 0.00 | 0.00 | 3.73 |
839 | 903 | 3.069158 | CCCCTCCGTTATCAAATACTCGT | 59.931 | 47.826 | 0.00 | 0.00 | 0.00 | 4.18 |
840 | 904 | 3.069158 | ACCCCTCCGTTATCAAATACTCG | 59.931 | 47.826 | 0.00 | 0.00 | 0.00 | 4.18 |
841 | 905 | 4.684484 | ACCCCTCCGTTATCAAATACTC | 57.316 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
842 | 906 | 5.664457 | AGTAACCCCTCCGTTATCAAATACT | 59.336 | 40.000 | 0.00 | 0.00 | 31.19 | 2.12 |
843 | 907 | 5.922053 | AGTAACCCCTCCGTTATCAAATAC | 58.078 | 41.667 | 0.00 | 0.00 | 31.19 | 1.89 |
844 | 908 | 7.860649 | ATAGTAACCCCTCCGTTATCAAATA | 57.139 | 36.000 | 0.00 | 0.00 | 31.19 | 1.40 |
845 | 909 | 6.758806 | ATAGTAACCCCTCCGTTATCAAAT | 57.241 | 37.500 | 0.00 | 0.00 | 31.19 | 2.32 |
846 | 910 | 7.860649 | ATATAGTAACCCCTCCGTTATCAAA | 57.139 | 36.000 | 0.00 | 0.00 | 31.19 | 2.69 |
874 | 938 | 3.703286 | AGTGTGCGTATCGTGCTTATA | 57.297 | 42.857 | 0.00 | 0.00 | 0.00 | 0.98 |
875 | 939 | 2.579207 | AGTGTGCGTATCGTGCTTAT | 57.421 | 45.000 | 0.00 | 0.00 | 0.00 | 1.73 |
876 | 940 | 2.421073 | ACTAGTGTGCGTATCGTGCTTA | 59.579 | 45.455 | 0.00 | 0.00 | 0.00 | 3.09 |
877 | 941 | 1.201647 | ACTAGTGTGCGTATCGTGCTT | 59.798 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
886 | 950 | 1.732259 | GCAATGCTTACTAGTGTGCGT | 59.268 | 47.619 | 5.39 | 8.15 | 0.00 | 5.24 |
900 | 964 | 1.807886 | CTCAGGCTTCTGGCAATGC | 59.192 | 57.895 | 0.00 | 0.00 | 44.01 | 3.56 |
1008 | 1082 | 1.675641 | GTCAAATGGCGCTCCACCT | 60.676 | 57.895 | 7.64 | 0.00 | 46.92 | 4.00 |
1143 | 1217 | 2.042404 | AAAACGTACGGAGGCACCCA | 62.042 | 55.000 | 21.06 | 0.00 | 34.64 | 4.51 |
1159 | 1233 | 3.413023 | CGGCGCGTCGGGTAAAAA | 61.413 | 61.111 | 27.94 | 0.00 | 0.00 | 1.94 |
1427 | 1501 | 1.927608 | GCTGGAGAAAAGGAAGCGGC | 61.928 | 60.000 | 0.00 | 0.00 | 0.00 | 6.53 |
1549 | 1629 | 2.434359 | GTACACCGCCAGCCTCAC | 60.434 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
1559 | 1639 | 2.181021 | GGTCTGAGGCGTACACCG | 59.819 | 66.667 | 0.00 | 0.00 | 40.40 | 4.94 |
1913 | 1993 | 2.244436 | CTTGTGCGGGTTCATGCTCG | 62.244 | 60.000 | 0.00 | 0.00 | 35.08 | 5.03 |
1995 | 2076 | 2.194597 | GGGTTGGTGGACACTGCA | 59.805 | 61.111 | 2.13 | 0.00 | 0.00 | 4.41 |
1999 | 2080 | 1.053424 | TACTCTGGGTTGGTGGACAC | 58.947 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2233 | 2320 | 3.745803 | GGAGAACCTCGTCGGCGT | 61.746 | 66.667 | 10.18 | 0.00 | 39.49 | 5.68 |
2431 | 2524 | 1.374758 | GCTCCCACGTGTCTTGGAG | 60.375 | 63.158 | 25.62 | 25.62 | 45.83 | 3.86 |
2466 | 2559 | 2.676822 | AGAGCGCGGACTTCCTCA | 60.677 | 61.111 | 8.83 | 0.00 | 0.00 | 3.86 |
2476 | 2569 | 4.821589 | GACCTTGGGGAGAGCGCG | 62.822 | 72.222 | 0.00 | 0.00 | 36.25 | 6.86 |
2492 | 2585 | 1.480954 | GTTCTTAGTCATGCCCGGAGA | 59.519 | 52.381 | 0.73 | 0.00 | 0.00 | 3.71 |
2538 | 2667 | 1.405526 | GGCGTGTTGGAGATGCTCTAA | 60.406 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
2539 | 2668 | 0.175760 | GGCGTGTTGGAGATGCTCTA | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2540 | 2669 | 1.078848 | GGCGTGTTGGAGATGCTCT | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 4.09 |
2541 | 2670 | 2.109126 | GGGCGTGTTGGAGATGCTC | 61.109 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
2542 | 2671 | 2.045926 | GGGCGTGTTGGAGATGCT | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 3.79 |
2543 | 2672 | 1.523154 | TTTGGGCGTGTTGGAGATGC | 61.523 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2544 | 2673 | 0.240945 | GTTTGGGCGTGTTGGAGATG | 59.759 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2545 | 2674 | 0.179004 | TGTTTGGGCGTGTTGGAGAT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2546 | 2675 | 1.098712 | GTGTTTGGGCGTGTTGGAGA | 61.099 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2547 | 2676 | 1.101049 | AGTGTTTGGGCGTGTTGGAG | 61.101 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2548 | 2677 | 1.077357 | AGTGTTTGGGCGTGTTGGA | 60.077 | 52.632 | 0.00 | 0.00 | 0.00 | 3.53 |
2549 | 2678 | 1.065600 | CAGTGTTTGGGCGTGTTGG | 59.934 | 57.895 | 0.00 | 0.00 | 0.00 | 3.77 |
2550 | 2679 | 1.065600 | CCAGTGTTTGGGCGTGTTG | 59.934 | 57.895 | 0.00 | 0.00 | 43.75 | 3.33 |
2551 | 2680 | 3.520402 | CCAGTGTTTGGGCGTGTT | 58.480 | 55.556 | 0.00 | 0.00 | 43.75 | 3.32 |
2559 | 2688 | 4.326766 | CGTGCGGCCCAGTGTTTG | 62.327 | 66.667 | 0.00 | 0.00 | 0.00 | 2.93 |
2564 | 2693 | 3.835790 | TTTTAGCGTGCGGCCCAGT | 62.836 | 57.895 | 0.00 | 0.00 | 45.17 | 4.00 |
2565 | 2694 | 2.322999 | GATTTTAGCGTGCGGCCCAG | 62.323 | 60.000 | 0.00 | 0.00 | 45.17 | 4.45 |
2566 | 2695 | 2.360600 | ATTTTAGCGTGCGGCCCA | 60.361 | 55.556 | 0.00 | 0.00 | 45.17 | 5.36 |
2567 | 2696 | 2.407616 | GATTTTAGCGTGCGGCCC | 59.592 | 61.111 | 0.00 | 0.00 | 45.17 | 5.80 |
2568 | 2697 | 2.407616 | GGATTTTAGCGTGCGGCC | 59.592 | 61.111 | 0.00 | 0.00 | 45.17 | 6.13 |
2569 | 2698 | 2.022762 | CGGATTTTAGCGTGCGGC | 59.977 | 61.111 | 0.00 | 0.00 | 44.05 | 6.53 |
2570 | 2699 | 2.707039 | CCGGATTTTAGCGTGCGG | 59.293 | 61.111 | 0.00 | 0.00 | 42.73 | 5.69 |
2571 | 2700 | 1.641123 | AACCCGGATTTTAGCGTGCG | 61.641 | 55.000 | 0.73 | 0.00 | 0.00 | 5.34 |
2572 | 2701 | 0.524414 | AAACCCGGATTTTAGCGTGC | 59.476 | 50.000 | 0.73 | 0.00 | 0.00 | 5.34 |
2573 | 2702 | 3.291809 | AAAAACCCGGATTTTAGCGTG | 57.708 | 42.857 | 7.04 | 0.00 | 31.50 | 5.34 |
2590 | 2719 | 3.135994 | GGAACTGTCTGGCGTCTAAAAA | 58.864 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
2591 | 2720 | 2.103432 | TGGAACTGTCTGGCGTCTAAAA | 59.897 | 45.455 | 0.00 | 0.00 | 0.00 | 1.52 |
2592 | 2721 | 1.689813 | TGGAACTGTCTGGCGTCTAAA | 59.310 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
2593 | 2722 | 1.272490 | CTGGAACTGTCTGGCGTCTAA | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
2594 | 2723 | 0.888619 | CTGGAACTGTCTGGCGTCTA | 59.111 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2595 | 2724 | 1.668294 | CTGGAACTGTCTGGCGTCT | 59.332 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
2596 | 2725 | 2.029844 | GCTGGAACTGTCTGGCGTC | 61.030 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
2597 | 2726 | 2.031163 | GCTGGAACTGTCTGGCGT | 59.969 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
2598 | 2727 | 0.108186 | TATGCTGGAACTGTCTGGCG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2599 | 2728 | 2.012673 | CTTATGCTGGAACTGTCTGGC | 58.987 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
2600 | 2729 | 2.012673 | GCTTATGCTGGAACTGTCTGG | 58.987 | 52.381 | 0.00 | 0.00 | 36.03 | 3.86 |
2621 | 2750 | 0.875040 | TTCGCGCGGACTGTTTTACA | 60.875 | 50.000 | 31.69 | 1.90 | 0.00 | 2.41 |
2622 | 2751 | 0.232816 | TTTCGCGCGGACTGTTTTAC | 59.767 | 50.000 | 31.69 | 0.00 | 0.00 | 2.01 |
2623 | 2752 | 0.935898 | TTTTCGCGCGGACTGTTTTA | 59.064 | 45.000 | 31.69 | 3.44 | 0.00 | 1.52 |
2624 | 2753 | 0.099082 | TTTTTCGCGCGGACTGTTTT | 59.901 | 45.000 | 31.69 | 0.00 | 0.00 | 2.43 |
2625 | 2754 | 1.722677 | TTTTTCGCGCGGACTGTTT | 59.277 | 47.368 | 31.69 | 0.00 | 0.00 | 2.83 |
2626 | 2755 | 3.412061 | TTTTTCGCGCGGACTGTT | 58.588 | 50.000 | 31.69 | 0.00 | 0.00 | 3.16 |
2640 | 2769 | 1.575803 | GCGCGCGTCGAATTTATTTTT | 59.424 | 42.857 | 32.35 | 0.00 | 41.67 | 1.94 |
2641 | 2770 | 1.176838 | GCGCGCGTCGAATTTATTTT | 58.823 | 45.000 | 32.35 | 0.00 | 41.67 | 1.82 |
2642 | 2771 | 0.372334 | AGCGCGCGTCGAATTTATTT | 59.628 | 45.000 | 32.35 | 0.00 | 41.67 | 1.40 |
2643 | 2772 | 0.315059 | CAGCGCGCGTCGAATTTATT | 60.315 | 50.000 | 32.35 | 0.00 | 41.67 | 1.40 |
2644 | 2773 | 1.143373 | TCAGCGCGCGTCGAATTTAT | 61.143 | 50.000 | 32.35 | 0.00 | 41.67 | 1.40 |
2645 | 2774 | 1.345660 | TTCAGCGCGCGTCGAATTTA | 61.346 | 50.000 | 32.35 | 9.94 | 41.67 | 1.40 |
2646 | 2775 | 2.165362 | TTTCAGCGCGCGTCGAATTT | 62.165 | 50.000 | 32.35 | 1.48 | 41.67 | 1.82 |
2647 | 2776 | 2.165362 | TTTTCAGCGCGCGTCGAATT | 62.165 | 50.000 | 32.35 | 2.41 | 41.67 | 2.17 |
2648 | 2777 | 2.165362 | TTTTTCAGCGCGCGTCGAAT | 62.165 | 50.000 | 32.35 | 3.33 | 41.67 | 3.34 |
2649 | 2778 | 2.872515 | TTTTTCAGCGCGCGTCGAA | 61.873 | 52.632 | 32.35 | 28.17 | 41.67 | 3.71 |
2650 | 2779 | 3.331630 | TTTTTCAGCGCGCGTCGA | 61.332 | 55.556 | 32.35 | 24.18 | 41.67 | 4.20 |
2651 | 2780 | 3.150485 | GTTTTTCAGCGCGCGTCG | 61.150 | 61.111 | 32.35 | 22.18 | 42.12 | 5.12 |
2652 | 2781 | 3.150485 | CGTTTTTCAGCGCGCGTC | 61.150 | 61.111 | 32.35 | 22.88 | 0.00 | 5.19 |
2658 | 2787 | 4.851558 | AGCTTTTAATAGCGTTTTTCAGCG | 59.148 | 37.500 | 11.55 | 0.00 | 45.82 | 5.18 |
2659 | 2788 | 5.629435 | ACAGCTTTTAATAGCGTTTTTCAGC | 59.371 | 36.000 | 11.55 | 0.00 | 45.82 | 4.26 |
2660 | 2789 | 8.722342 | TTACAGCTTTTAATAGCGTTTTTCAG | 57.278 | 30.769 | 15.80 | 4.20 | 45.82 | 3.02 |
2661 | 2790 | 9.685828 | ATTTACAGCTTTTAATAGCGTTTTTCA | 57.314 | 25.926 | 15.80 | 1.35 | 45.82 | 2.69 |
2665 | 2794 | 9.685828 | TCAAATTTACAGCTTTTAATAGCGTTT | 57.314 | 25.926 | 15.80 | 7.19 | 45.82 | 3.60 |
2666 | 2795 | 9.341899 | CTCAAATTTACAGCTTTTAATAGCGTT | 57.658 | 29.630 | 15.80 | 9.07 | 45.82 | 4.84 |
2667 | 2796 | 7.968405 | CCTCAAATTTACAGCTTTTAATAGCGT | 59.032 | 33.333 | 11.55 | 13.73 | 45.82 | 5.07 |
2668 | 2797 | 7.044052 | GCCTCAAATTTACAGCTTTTAATAGCG | 60.044 | 37.037 | 11.55 | 9.39 | 45.82 | 4.26 |
2669 | 2798 | 7.044052 | CGCCTCAAATTTACAGCTTTTAATAGC | 60.044 | 37.037 | 9.63 | 9.63 | 41.53 | 2.97 |
2670 | 2799 | 7.968405 | ACGCCTCAAATTTACAGCTTTTAATAG | 59.032 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
2671 | 2800 | 7.822658 | ACGCCTCAAATTTACAGCTTTTAATA | 58.177 | 30.769 | 0.00 | 0.00 | 0.00 | 0.98 |
2672 | 2801 | 6.687604 | ACGCCTCAAATTTACAGCTTTTAAT | 58.312 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2673 | 2802 | 6.079424 | ACGCCTCAAATTTACAGCTTTTAA | 57.921 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
2674 | 2803 | 5.615984 | CGACGCCTCAAATTTACAGCTTTTA | 60.616 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2675 | 2804 | 4.546570 | GACGCCTCAAATTTACAGCTTTT | 58.453 | 39.130 | 0.00 | 0.00 | 0.00 | 2.27 |
2676 | 2805 | 3.364964 | CGACGCCTCAAATTTACAGCTTT | 60.365 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
2677 | 2806 | 2.159627 | CGACGCCTCAAATTTACAGCTT | 59.840 | 45.455 | 0.00 | 0.00 | 0.00 | 3.74 |
2678 | 2807 | 1.732259 | CGACGCCTCAAATTTACAGCT | 59.268 | 47.619 | 0.00 | 0.00 | 0.00 | 4.24 |
2679 | 2808 | 1.202031 | CCGACGCCTCAAATTTACAGC | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
2680 | 2809 | 2.343101 | TCCGACGCCTCAAATTTACAG | 58.657 | 47.619 | 0.00 | 0.00 | 0.00 | 2.74 |
2681 | 2810 | 2.459060 | TCCGACGCCTCAAATTTACA | 57.541 | 45.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2682 | 2811 | 2.933906 | TGATCCGACGCCTCAAATTTAC | 59.066 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
2683 | 2812 | 3.254470 | TGATCCGACGCCTCAAATTTA | 57.746 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
2684 | 2813 | 2.107950 | TGATCCGACGCCTCAAATTT | 57.892 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2685 | 2814 | 1.942657 | CATGATCCGACGCCTCAAATT | 59.057 | 47.619 | 2.33 | 0.00 | 0.00 | 1.82 |
2686 | 2815 | 1.586422 | CATGATCCGACGCCTCAAAT | 58.414 | 50.000 | 2.33 | 0.00 | 0.00 | 2.32 |
2687 | 2816 | 1.089481 | GCATGATCCGACGCCTCAAA | 61.089 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2688 | 2817 | 1.521457 | GCATGATCCGACGCCTCAA | 60.521 | 57.895 | 0.00 | 0.00 | 0.00 | 3.02 |
2689 | 2818 | 2.106938 | GCATGATCCGACGCCTCA | 59.893 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
2690 | 2819 | 3.032609 | CGCATGATCCGACGCCTC | 61.033 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
2695 | 2824 | 3.215606 | GAAGCGCGCATGATCCGAC | 62.216 | 63.158 | 35.10 | 3.10 | 0.00 | 4.79 |
2696 | 2825 | 2.961721 | GAAGCGCGCATGATCCGA | 60.962 | 61.111 | 35.10 | 0.00 | 0.00 | 4.55 |
2697 | 2826 | 3.264159 | TGAAGCGCGCATGATCCG | 61.264 | 61.111 | 35.10 | 0.00 | 0.00 | 4.18 |
2698 | 2827 | 1.980951 | TTGTGAAGCGCGCATGATCC | 61.981 | 55.000 | 35.10 | 15.67 | 36.78 | 3.36 |
2699 | 2828 | 0.028505 | ATTGTGAAGCGCGCATGATC | 59.971 | 50.000 | 35.10 | 23.99 | 36.78 | 2.92 |
2700 | 2829 | 0.452987 | AATTGTGAAGCGCGCATGAT | 59.547 | 45.000 | 35.10 | 16.44 | 36.78 | 2.45 |
2701 | 2830 | 0.240678 | AAATTGTGAAGCGCGCATGA | 59.759 | 45.000 | 35.10 | 14.12 | 36.78 | 3.07 |
2702 | 2831 | 1.578915 | GTAAATTGTGAAGCGCGCATG | 59.421 | 47.619 | 35.10 | 0.00 | 36.78 | 4.06 |
2703 | 2832 | 1.198867 | TGTAAATTGTGAAGCGCGCAT | 59.801 | 42.857 | 35.10 | 24.08 | 36.78 | 4.73 |
2704 | 2833 | 0.588737 | TGTAAATTGTGAAGCGCGCA | 59.411 | 45.000 | 35.10 | 12.17 | 34.64 | 6.09 |
2705 | 2834 | 0.974836 | GTGTAAATTGTGAAGCGCGC | 59.025 | 50.000 | 26.66 | 26.66 | 0.00 | 6.86 |
2706 | 2835 | 2.233355 | CAGTGTAAATTGTGAAGCGCG | 58.767 | 47.619 | 0.00 | 0.00 | 0.00 | 6.86 |
2707 | 2836 | 1.978782 | GCAGTGTAAATTGTGAAGCGC | 59.021 | 47.619 | 0.00 | 0.00 | 0.00 | 5.92 |
2708 | 2837 | 3.266541 | TGCAGTGTAAATTGTGAAGCG | 57.733 | 42.857 | 0.00 | 0.00 | 0.00 | 4.68 |
2709 | 2838 | 4.549458 | ACATGCAGTGTAAATTGTGAAGC | 58.451 | 39.130 | 0.00 | 0.00 | 39.91 | 3.86 |
2710 | 2839 | 6.441274 | AGAACATGCAGTGTAAATTGTGAAG | 58.559 | 36.000 | 0.00 | 0.00 | 41.14 | 3.02 |
2711 | 2840 | 6.262944 | AGAGAACATGCAGTGTAAATTGTGAA | 59.737 | 34.615 | 0.00 | 0.00 | 41.14 | 3.18 |
2712 | 2841 | 5.764686 | AGAGAACATGCAGTGTAAATTGTGA | 59.235 | 36.000 | 0.00 | 0.00 | 41.14 | 3.58 |
2713 | 2842 | 6.005583 | AGAGAACATGCAGTGTAAATTGTG | 57.994 | 37.500 | 0.00 | 0.00 | 41.14 | 3.33 |
2714 | 2843 | 6.039717 | ACAAGAGAACATGCAGTGTAAATTGT | 59.960 | 34.615 | 0.00 | 4.86 | 41.14 | 2.71 |
2715 | 2844 | 6.361481 | CACAAGAGAACATGCAGTGTAAATTG | 59.639 | 38.462 | 0.00 | 4.33 | 41.14 | 2.32 |
2716 | 2845 | 6.441274 | CACAAGAGAACATGCAGTGTAAATT | 58.559 | 36.000 | 0.00 | 0.00 | 41.14 | 1.82 |
2717 | 2846 | 5.563475 | GCACAAGAGAACATGCAGTGTAAAT | 60.563 | 40.000 | 0.00 | 0.00 | 41.14 | 1.40 |
2718 | 2847 | 4.261155 | GCACAAGAGAACATGCAGTGTAAA | 60.261 | 41.667 | 0.00 | 0.00 | 41.14 | 2.01 |
2719 | 2848 | 3.250762 | GCACAAGAGAACATGCAGTGTAA | 59.749 | 43.478 | 0.00 | 0.00 | 41.14 | 2.41 |
2720 | 2849 | 2.807967 | GCACAAGAGAACATGCAGTGTA | 59.192 | 45.455 | 0.00 | 0.00 | 41.14 | 2.90 |
2721 | 2850 | 1.605710 | GCACAAGAGAACATGCAGTGT | 59.394 | 47.619 | 0.00 | 0.00 | 44.84 | 3.55 |
2722 | 2851 | 1.399343 | CGCACAAGAGAACATGCAGTG | 60.399 | 52.381 | 0.00 | 0.00 | 37.97 | 3.66 |
2723 | 2852 | 0.870393 | CGCACAAGAGAACATGCAGT | 59.130 | 50.000 | 0.00 | 0.00 | 37.97 | 4.40 |
2724 | 2853 | 0.453950 | GCGCACAAGAGAACATGCAG | 60.454 | 55.000 | 0.30 | 0.00 | 37.97 | 4.41 |
2725 | 2854 | 1.575922 | GCGCACAAGAGAACATGCA | 59.424 | 52.632 | 0.30 | 0.00 | 37.97 | 3.96 |
2726 | 2855 | 1.510623 | CGCGCACAAGAGAACATGC | 60.511 | 57.895 | 8.75 | 0.00 | 34.66 | 4.06 |
2727 | 2856 | 1.510623 | GCGCGCACAAGAGAACATG | 60.511 | 57.895 | 29.10 | 0.00 | 0.00 | 3.21 |
2728 | 2857 | 2.863153 | GCGCGCACAAGAGAACAT | 59.137 | 55.556 | 29.10 | 0.00 | 0.00 | 2.71 |
2729 | 2858 | 3.701530 | CGCGCGCACAAGAGAACA | 61.702 | 61.111 | 32.61 | 0.00 | 0.00 | 3.18 |
2730 | 2859 | 2.695712 | AAACGCGCGCACAAGAGAAC | 62.696 | 55.000 | 32.58 | 0.00 | 0.00 | 3.01 |
2731 | 2860 | 2.042520 | AAAACGCGCGCACAAGAGAA | 62.043 | 50.000 | 32.58 | 0.00 | 0.00 | 2.87 |
2732 | 2861 | 2.042520 | AAAAACGCGCGCACAAGAGA | 62.043 | 50.000 | 32.58 | 0.00 | 0.00 | 3.10 |
2733 | 2862 | 1.654137 | AAAAACGCGCGCACAAGAG | 60.654 | 52.632 | 32.58 | 16.12 | 0.00 | 2.85 |
2734 | 2863 | 1.936880 | CAAAAACGCGCGCACAAGA | 60.937 | 52.632 | 32.58 | 0.00 | 0.00 | 3.02 |
2735 | 2864 | 1.467556 | TTCAAAAACGCGCGCACAAG | 61.468 | 50.000 | 32.58 | 17.34 | 0.00 | 3.16 |
2736 | 2865 | 1.514228 | TTCAAAAACGCGCGCACAA | 60.514 | 47.368 | 32.58 | 11.40 | 0.00 | 3.33 |
2737 | 2866 | 2.100410 | TTCAAAAACGCGCGCACA | 59.900 | 50.000 | 32.58 | 4.88 | 0.00 | 4.57 |
2738 | 2867 | 1.536462 | ATGTTCAAAAACGCGCGCAC | 61.536 | 50.000 | 32.58 | 19.00 | 38.28 | 5.34 |
2739 | 2868 | 1.265462 | GATGTTCAAAAACGCGCGCA | 61.265 | 50.000 | 32.58 | 17.60 | 38.28 | 6.09 |
2740 | 2869 | 0.996727 | AGATGTTCAAAAACGCGCGC | 60.997 | 50.000 | 32.58 | 23.91 | 38.28 | 6.86 |
2741 | 2870 | 0.697010 | CAGATGTTCAAAAACGCGCG | 59.303 | 50.000 | 30.96 | 30.96 | 38.28 | 6.86 |
2742 | 2871 | 0.430858 | GCAGATGTTCAAAAACGCGC | 59.569 | 50.000 | 5.73 | 0.00 | 38.28 | 6.86 |
2743 | 2872 | 2.036556 | AGCAGATGTTCAAAAACGCG | 57.963 | 45.000 | 3.53 | 3.53 | 38.28 | 6.01 |
2744 | 2873 | 4.143535 | GCTTAAGCAGATGTTCAAAAACGC | 60.144 | 41.667 | 22.59 | 0.00 | 41.59 | 4.84 |
2745 | 2874 | 5.486095 | GCTTAAGCAGATGTTCAAAAACG | 57.514 | 39.130 | 22.59 | 0.00 | 41.59 | 3.60 |
2760 | 2889 | 1.334869 | CGGACCCATCATTGCTTAAGC | 59.665 | 52.381 | 20.84 | 20.84 | 42.50 | 3.09 |
2761 | 2890 | 1.949525 | CCGGACCCATCATTGCTTAAG | 59.050 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
2762 | 2891 | 2.021723 | GCCGGACCCATCATTGCTTAA | 61.022 | 52.381 | 5.05 | 0.00 | 0.00 | 1.85 |
2763 | 2892 | 0.465460 | GCCGGACCCATCATTGCTTA | 60.465 | 55.000 | 5.05 | 0.00 | 0.00 | 3.09 |
2764 | 2893 | 1.754234 | GCCGGACCCATCATTGCTT | 60.754 | 57.895 | 5.05 | 0.00 | 0.00 | 3.91 |
2765 | 2894 | 2.124151 | GCCGGACCCATCATTGCT | 60.124 | 61.111 | 5.05 | 0.00 | 0.00 | 3.91 |
2766 | 2895 | 2.933878 | TACGCCGGACCCATCATTGC | 62.934 | 60.000 | 5.05 | 0.00 | 0.00 | 3.56 |
2767 | 2896 | 1.145156 | TACGCCGGACCCATCATTG | 59.855 | 57.895 | 5.05 | 0.00 | 0.00 | 2.82 |
2768 | 2897 | 1.145377 | GTACGCCGGACCCATCATT | 59.855 | 57.895 | 5.05 | 0.00 | 0.00 | 2.57 |
2769 | 2898 | 0.468585 | TAGTACGCCGGACCCATCAT | 60.469 | 55.000 | 5.05 | 0.00 | 0.00 | 2.45 |
2770 | 2899 | 0.683828 | TTAGTACGCCGGACCCATCA | 60.684 | 55.000 | 5.05 | 0.00 | 0.00 | 3.07 |
2771 | 2900 | 0.461135 | TTTAGTACGCCGGACCCATC | 59.539 | 55.000 | 5.05 | 0.00 | 0.00 | 3.51 |
2772 | 2901 | 0.903942 | TTTTAGTACGCCGGACCCAT | 59.096 | 50.000 | 5.05 | 0.00 | 0.00 | 4.00 |
2773 | 2902 | 0.247185 | CTTTTAGTACGCCGGACCCA | 59.753 | 55.000 | 5.05 | 0.00 | 0.00 | 4.51 |
2774 | 2903 | 0.247460 | ACTTTTAGTACGCCGGACCC | 59.753 | 55.000 | 5.05 | 0.00 | 0.00 | 4.46 |
2775 | 2904 | 1.353076 | CACTTTTAGTACGCCGGACC | 58.647 | 55.000 | 5.05 | 0.00 | 0.00 | 4.46 |
2776 | 2905 | 0.717784 | GCACTTTTAGTACGCCGGAC | 59.282 | 55.000 | 5.05 | 0.00 | 0.00 | 4.79 |
2777 | 2906 | 0.604578 | AGCACTTTTAGTACGCCGGA | 59.395 | 50.000 | 5.05 | 0.00 | 0.00 | 5.14 |
2778 | 2907 | 1.922545 | GTAGCACTTTTAGTACGCCGG | 59.077 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
2779 | 2908 | 2.597305 | CTGTAGCACTTTTAGTACGCCG | 59.403 | 50.000 | 0.00 | 0.00 | 0.00 | 6.46 |
2780 | 2909 | 3.367025 | CACTGTAGCACTTTTAGTACGCC | 59.633 | 47.826 | 0.00 | 0.00 | 0.00 | 5.68 |
2781 | 2910 | 3.367025 | CCACTGTAGCACTTTTAGTACGC | 59.633 | 47.826 | 0.00 | 0.00 | 0.00 | 4.42 |
2782 | 2911 | 3.367025 | GCCACTGTAGCACTTTTAGTACG | 59.633 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
2783 | 2912 | 3.367025 | CGCCACTGTAGCACTTTTAGTAC | 59.633 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
2784 | 2913 | 3.581755 | CGCCACTGTAGCACTTTTAGTA | 58.418 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
2785 | 2914 | 2.413837 | CGCCACTGTAGCACTTTTAGT | 58.586 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
2786 | 2915 | 1.128692 | GCGCCACTGTAGCACTTTTAG | 59.871 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
2787 | 2916 | 1.153353 | GCGCCACTGTAGCACTTTTA | 58.847 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2788 | 2917 | 1.841663 | CGCGCCACTGTAGCACTTTT | 61.842 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
2789 | 2918 | 2.317609 | CGCGCCACTGTAGCACTTT | 61.318 | 57.895 | 0.00 | 0.00 | 0.00 | 2.66 |
2790 | 2919 | 2.738521 | CGCGCCACTGTAGCACTT | 60.739 | 61.111 | 0.00 | 0.00 | 0.00 | 3.16 |
2792 | 2921 | 3.982372 | TAGCGCGCCACTGTAGCAC | 62.982 | 63.158 | 30.33 | 0.00 | 0.00 | 4.40 |
2793 | 2922 | 2.773397 | TTTAGCGCGCCACTGTAGCA | 62.773 | 55.000 | 30.33 | 0.71 | 0.00 | 3.49 |
2794 | 2923 | 1.632046 | TTTTAGCGCGCCACTGTAGC | 61.632 | 55.000 | 30.33 | 0.00 | 0.00 | 3.58 |
2795 | 2924 | 0.094730 | GTTTTAGCGCGCCACTGTAG | 59.905 | 55.000 | 30.33 | 0.00 | 0.00 | 2.74 |
2796 | 2925 | 0.320073 | AGTTTTAGCGCGCCACTGTA | 60.320 | 50.000 | 30.33 | 10.64 | 0.00 | 2.74 |
2797 | 2926 | 0.320073 | TAGTTTTAGCGCGCCACTGT | 60.320 | 50.000 | 30.33 | 11.88 | 0.00 | 3.55 |
2798 | 2927 | 1.006832 | ATAGTTTTAGCGCGCCACTG | 58.993 | 50.000 | 30.33 | 0.00 | 0.00 | 3.66 |
2799 | 2928 | 1.734163 | AATAGTTTTAGCGCGCCACT | 58.266 | 45.000 | 30.33 | 25.00 | 0.00 | 4.00 |
2800 | 2929 | 2.537639 | AAATAGTTTTAGCGCGCCAC | 57.462 | 45.000 | 30.33 | 19.26 | 0.00 | 5.01 |
2801 | 2930 | 3.064271 | CCTAAAATAGTTTTAGCGCGCCA | 59.936 | 43.478 | 30.33 | 12.88 | 46.75 | 5.69 |
2802 | 2931 | 3.547413 | CCCTAAAATAGTTTTAGCGCGCC | 60.547 | 47.826 | 30.33 | 12.43 | 46.75 | 6.53 |
2803 | 2932 | 3.614588 | CCCTAAAATAGTTTTAGCGCGC | 58.385 | 45.455 | 26.66 | 26.66 | 46.75 | 6.86 |
2804 | 2933 | 3.614588 | GCCCTAAAATAGTTTTAGCGCG | 58.385 | 45.455 | 0.00 | 0.00 | 46.75 | 6.86 |
2806 | 2935 | 4.495184 | CCGTGCCCTAAAATAGTTTTAGCG | 60.495 | 45.833 | 13.91 | 11.93 | 46.75 | 4.26 |
2807 | 2936 | 4.201980 | CCCGTGCCCTAAAATAGTTTTAGC | 60.202 | 45.833 | 13.91 | 7.65 | 46.75 | 3.09 |
2809 | 2938 | 5.176741 | TCCCGTGCCCTAAAATAGTTTTA | 57.823 | 39.130 | 0.00 | 0.00 | 34.19 | 1.52 |
2810 | 2939 | 4.036941 | TCCCGTGCCCTAAAATAGTTTT | 57.963 | 40.909 | 0.00 | 0.00 | 36.67 | 2.43 |
2811 | 2940 | 3.724732 | TCCCGTGCCCTAAAATAGTTT | 57.275 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
2812 | 2941 | 3.945640 | ATCCCGTGCCCTAAAATAGTT | 57.054 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
2813 | 2942 | 3.945640 | AATCCCGTGCCCTAAAATAGT | 57.054 | 42.857 | 0.00 | 0.00 | 0.00 | 2.12 |
2814 | 2943 | 5.105513 | ACAAAAATCCCGTGCCCTAAAATAG | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2815 | 2944 | 4.773149 | ACAAAAATCCCGTGCCCTAAAATA | 59.227 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
2816 | 2945 | 3.580895 | ACAAAAATCCCGTGCCCTAAAAT | 59.419 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
2817 | 2946 | 2.966516 | ACAAAAATCCCGTGCCCTAAAA | 59.033 | 40.909 | 0.00 | 0.00 | 0.00 | 1.52 |
2818 | 2947 | 2.297597 | CACAAAAATCCCGTGCCCTAAA | 59.702 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
2819 | 2948 | 1.889829 | CACAAAAATCCCGTGCCCTAA | 59.110 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
2820 | 2949 | 1.540267 | CACAAAAATCCCGTGCCCTA | 58.460 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2821 | 2950 | 2.350738 | CACAAAAATCCCGTGCCCT | 58.649 | 52.632 | 0.00 | 0.00 | 0.00 | 5.19 |
2822 | 2951 | 4.985845 | CACAAAAATCCCGTGCCC | 57.014 | 55.556 | 0.00 | 0.00 | 0.00 | 5.36 |
2825 | 2954 | 0.673437 | AGGTGCACAAAAATCCCGTG | 59.327 | 50.000 | 20.43 | 0.00 | 0.00 | 4.94 |
2826 | 2955 | 0.673437 | CAGGTGCACAAAAATCCCGT | 59.327 | 50.000 | 20.43 | 0.00 | 0.00 | 5.28 |
2827 | 2956 | 0.667184 | GCAGGTGCACAAAAATCCCG | 60.667 | 55.000 | 20.43 | 0.00 | 41.59 | 5.14 |
2828 | 2957 | 0.681175 | AGCAGGTGCACAAAAATCCC | 59.319 | 50.000 | 20.43 | 0.00 | 45.16 | 3.85 |
2829 | 2958 | 1.606224 | CCAGCAGGTGCACAAAAATCC | 60.606 | 52.381 | 20.43 | 0.00 | 45.16 | 3.01 |
2830 | 2959 | 1.340889 | TCCAGCAGGTGCACAAAAATC | 59.659 | 47.619 | 20.43 | 0.00 | 45.16 | 2.17 |
2831 | 2960 | 1.342174 | CTCCAGCAGGTGCACAAAAAT | 59.658 | 47.619 | 20.43 | 0.00 | 45.16 | 1.82 |
2832 | 2961 | 0.746063 | CTCCAGCAGGTGCACAAAAA | 59.254 | 50.000 | 20.43 | 0.00 | 45.16 | 1.94 |
2833 | 2962 | 0.106769 | TCTCCAGCAGGTGCACAAAA | 60.107 | 50.000 | 20.43 | 0.00 | 45.16 | 2.44 |
2834 | 2963 | 0.111061 | ATCTCCAGCAGGTGCACAAA | 59.889 | 50.000 | 20.43 | 0.00 | 45.16 | 2.83 |
2835 | 2964 | 0.607217 | CATCTCCAGCAGGTGCACAA | 60.607 | 55.000 | 20.43 | 0.00 | 45.16 | 3.33 |
2836 | 2965 | 1.002990 | CATCTCCAGCAGGTGCACA | 60.003 | 57.895 | 20.43 | 0.00 | 45.16 | 4.57 |
2837 | 2966 | 3.900855 | CATCTCCAGCAGGTGCAC | 58.099 | 61.111 | 8.80 | 8.80 | 45.16 | 4.57 |
2840 | 2969 | 4.536316 | GAGCATCTCCAGCAGGTG | 57.464 | 61.111 | 0.00 | 0.00 | 36.12 | 4.00 |
2920 | 3049 | 6.616774 | ATTTTTCATTTTGCGTTGTGGATT | 57.383 | 29.167 | 0.00 | 0.00 | 0.00 | 3.01 |
2981 | 3248 | 0.457851 | GCAGCTCGGATACTGTCTGT | 59.542 | 55.000 | 9.19 | 0.00 | 36.26 | 3.41 |
2984 | 3251 | 0.317436 | CTCGCAGCTCGGATACTGTC | 60.317 | 60.000 | 9.19 | 2.88 | 39.05 | 3.51 |
3245 | 3518 | 4.762251 | CCTAACAGAAGAAGAAACTTGGGG | 59.238 | 45.833 | 0.00 | 0.00 | 0.00 | 4.96 |
3263 | 3536 | 4.974399 | AGAGGCATTGCTATTACCCTAAC | 58.026 | 43.478 | 8.82 | 0.00 | 0.00 | 2.34 |
3296 | 3569 | 8.706322 | AAAGGACAAAAGGAAATTCTAAGCTA | 57.294 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
3297 | 3570 | 7.603180 | AAAGGACAAAAGGAAATTCTAAGCT | 57.397 | 32.000 | 0.00 | 0.00 | 0.00 | 3.74 |
3298 | 3571 | 9.411801 | CTAAAAGGACAAAAGGAAATTCTAAGC | 57.588 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
3299 | 3572 | 9.411801 | GCTAAAAGGACAAAAGGAAATTCTAAG | 57.588 | 33.333 | 0.00 | 0.00 | 0.00 | 2.18 |
3300 | 3573 | 9.143155 | AGCTAAAAGGACAAAAGGAAATTCTAA | 57.857 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
3301 | 3574 | 8.706322 | AGCTAAAAGGACAAAAGGAAATTCTA | 57.294 | 30.769 | 0.00 | 0.00 | 0.00 | 2.10 |
3302 | 3575 | 7.603180 | AGCTAAAAGGACAAAAGGAAATTCT | 57.397 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3303 | 3576 | 8.551205 | CAAAGCTAAAAGGACAAAAGGAAATTC | 58.449 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
3304 | 3577 | 8.046708 | ACAAAGCTAAAAGGACAAAAGGAAATT | 58.953 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
3309 | 3582 | 9.626045 | CTAATACAAAGCTAAAAGGACAAAAGG | 57.374 | 33.333 | 0.00 | 0.00 | 0.00 | 3.11 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.