Multiple sequence alignment - TraesCS3B01G424800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G424800 chr3B 100.000 4535 0 0 1 4535 662799680 662795146 0.000000e+00 8375.0
1 TraesCS3B01G424800 chr3B 90.674 890 83 0 2668 3557 662551726 662550837 0.000000e+00 1184.0
2 TraesCS3B01G424800 chr3B 86.757 959 97 20 989 1932 662557169 662556226 0.000000e+00 1040.0
3 TraesCS3B01G424800 chr3D 89.295 1504 82 21 824 2280 501164769 501163298 0.000000e+00 1812.0
4 TraesCS3B01G424800 chr3D 93.316 1167 67 6 2400 3561 501163290 501162130 0.000000e+00 1712.0
5 TraesCS3B01G424800 chr3D 92.402 895 67 1 2668 3562 501078368 501077475 0.000000e+00 1275.0
6 TraesCS3B01G424800 chr3D 91.935 744 58 2 1189 1931 501086840 501086098 0.000000e+00 1040.0
7 TraesCS3B01G424800 chr3D 90.427 679 64 1 3852 4529 124504183 124504861 0.000000e+00 893.0
8 TraesCS3B01G424800 chr3D 85.877 878 54 22 1 841 501165629 501164785 0.000000e+00 870.0
9 TraesCS3B01G424800 chr3D 75.824 364 58 26 1455 1806 23730707 23730362 1.690000e-34 158.0
10 TraesCS3B01G424800 chr3D 91.525 59 3 2 2359 2417 540566631 540566687 3.760000e-11 80.5
11 TraesCS3B01G424800 chr3A 92.612 1164 72 10 2402 3561 640750136 640748983 0.000000e+00 1661.0
12 TraesCS3B01G424800 chr3A 94.190 895 52 0 2664 3558 640699825 640698931 0.000000e+00 1365.0
13 TraesCS3B01G424800 chr3A 93.127 873 48 4 2665 3537 640679942 640679082 0.000000e+00 1269.0
14 TraesCS3B01G424800 chr3A 88.504 896 88 2 2667 3562 640626102 640625222 0.000000e+00 1070.0
15 TraesCS3B01G424800 chr3A 88.034 819 65 19 1167 1983 640632046 640631259 0.000000e+00 939.0
16 TraesCS3B01G424800 chr3A 87.912 819 66 19 1167 1983 640702453 640701666 0.000000e+00 933.0
17 TraesCS3B01G424800 chr3A 89.680 688 67 4 3851 4535 736809357 736808671 0.000000e+00 874.0
18 TraesCS3B01G424800 chr3A 91.135 643 35 14 1413 2051 640751132 640750508 0.000000e+00 852.0
19 TraesCS3B01G424800 chr3A 83.976 830 52 43 643 1409 640752036 640751225 0.000000e+00 721.0
20 TraesCS3B01G424800 chr3A 88.662 441 28 10 1167 1607 640682569 640682151 6.730000e-143 518.0
21 TraesCS3B01G424800 chr3A 84.211 190 19 6 2085 2272 640750311 640750131 1.680000e-39 174.0
22 TraesCS3B01G424800 chr3A 89.583 96 6 3 545 640 640752570 640752479 7.970000e-23 119.0
23 TraesCS3B01G424800 chr3A 81.203 133 8 8 484 602 640752180 640752051 1.740000e-14 91.6
24 TraesCS3B01G424800 chr5B 90.147 883 78 7 2660 3537 426559158 426558280 0.000000e+00 1140.0
25 TraesCS3B01G424800 chr5B 89.338 544 54 4 1414 1955 426565685 426565144 0.000000e+00 680.0
26 TraesCS3B01G424800 chr5B 80.812 542 47 30 913 1409 426566313 426565784 5.540000e-99 372.0
27 TraesCS3B01G424800 chr5B 86.139 101 10 3 2307 2403 82469053 82469153 6.200000e-19 106.0
28 TraesCS3B01G424800 chr5B 92.727 55 3 1 2349 2402 28408517 28408571 1.350000e-10 78.7
29 TraesCS3B01G424800 chr5B 90.323 62 2 3 2359 2420 633667196 633667253 1.350000e-10 78.7
30 TraesCS3B01G424800 chr5B 97.727 44 1 0 2359 2402 425605244 425605287 4.860000e-10 76.8
31 TraesCS3B01G424800 chr7D 88.729 905 94 7 2652 3553 54923190 54922291 0.000000e+00 1099.0
32 TraesCS3B01G424800 chr7D 90.717 614 55 2 1413 2025 54926442 54925830 0.000000e+00 817.0
33 TraesCS3B01G424800 chr7D 80.679 471 59 21 966 1409 54926994 54926529 2.020000e-88 337.0
34 TraesCS3B01G424800 chr2D 93.431 685 44 1 3852 4535 632804356 632805040 0.000000e+00 1014.0
35 TraesCS3B01G424800 chr2D 90.233 686 65 2 3852 4535 527524428 527523743 0.000000e+00 894.0
36 TraesCS3B01G424800 chr2D 96.078 51 2 0 2359 2409 98644467 98644417 2.910000e-12 84.2
37 TraesCS3B01G424800 chr4A 91.739 690 51 5 3850 4535 624134002 624133315 0.000000e+00 953.0
38 TraesCS3B01G424800 chr4A 86.261 888 109 6 2667 3552 670835316 670836192 0.000000e+00 952.0
39 TraesCS3B01G424800 chr4A 84.615 104 8 5 2307 2402 700734177 700734074 3.730000e-16 97.1
40 TraesCS3B01G424800 chr5D 90.936 684 61 1 3853 4535 313115328 313114645 0.000000e+00 918.0
41 TraesCS3B01G424800 chr6D 92.767 636 39 4 3852 4486 316094827 316094198 0.000000e+00 913.0
42 TraesCS3B01G424800 chr6D 96.226 53 1 1 2358 2410 143083928 143083979 8.080000e-13 86.1
43 TraesCS3B01G424800 chrUn 90.233 686 64 3 3852 4535 108306432 108305748 0.000000e+00 893.0
44 TraesCS3B01G424800 chr7A 89.811 687 66 4 3852 4535 650614135 650613450 0.000000e+00 878.0
45 TraesCS3B01G424800 chr7A 90.924 617 49 5 1413 2024 58209004 58209618 0.000000e+00 822.0
46 TraesCS3B01G424800 chr7A 81.628 430 52 20 997 1406 58208506 58208928 9.400000e-87 331.0
47 TraesCS3B01G424800 chr7A 90.476 84 3 4 2320 2403 154386963 154386885 6.200000e-19 106.0
48 TraesCS3B01G424800 chr7A 84.466 103 11 5 2301 2403 154386882 154386979 3.730000e-16 97.1
49 TraesCS3B01G424800 chr2B 93.976 83 4 1 2321 2402 184655570 184655652 1.710000e-24 124.0
50 TraesCS3B01G424800 chr6B 90.909 88 6 2 2321 2406 422651600 422651687 2.870000e-22 117.0
51 TraesCS3B01G424800 chr6B 89.655 87 7 2 2319 2403 675621811 675621897 4.800000e-20 110.0
52 TraesCS3B01G424800 chr7B 89.286 84 7 2 2321 2402 419038296 419038213 2.230000e-18 104.0
53 TraesCS3B01G424800 chr1B 89.286 84 7 2 2321 2403 640605094 640605176 2.230000e-18 104.0
54 TraesCS3B01G424800 chr6A 96.154 52 2 0 2358 2409 16471833 16471884 8.080000e-13 86.1
55 TraesCS3B01G424800 chr2A 94.444 54 1 2 2358 2411 63355886 63355835 1.050000e-11 82.4
56 TraesCS3B01G424800 chr5A 95.833 48 2 0 2358 2405 10205997 10206044 1.350000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G424800 chr3B 662795146 662799680 4534 True 8375.000000 8375 100.000000 1 4535 1 chr3B.!!$R3 4534
1 TraesCS3B01G424800 chr3B 662550837 662551726 889 True 1184.000000 1184 90.674000 2668 3557 1 chr3B.!!$R1 889
2 TraesCS3B01G424800 chr3B 662556226 662557169 943 True 1040.000000 1040 86.757000 989 1932 1 chr3B.!!$R2 943
3 TraesCS3B01G424800 chr3D 501162130 501165629 3499 True 1464.666667 1812 89.496000 1 3561 3 chr3D.!!$R4 3560
4 TraesCS3B01G424800 chr3D 501077475 501078368 893 True 1275.000000 1275 92.402000 2668 3562 1 chr3D.!!$R2 894
5 TraesCS3B01G424800 chr3D 501086098 501086840 742 True 1040.000000 1040 91.935000 1189 1931 1 chr3D.!!$R3 742
6 TraesCS3B01G424800 chr3D 124504183 124504861 678 False 893.000000 893 90.427000 3852 4529 1 chr3D.!!$F1 677
7 TraesCS3B01G424800 chr3A 640698931 640702453 3522 True 1149.000000 1365 91.051000 1167 3558 2 chr3A.!!$R5 2391
8 TraesCS3B01G424800 chr3A 640625222 640626102 880 True 1070.000000 1070 88.504000 2667 3562 1 chr3A.!!$R1 895
9 TraesCS3B01G424800 chr3A 640631259 640632046 787 True 939.000000 939 88.034000 1167 1983 1 chr3A.!!$R2 816
10 TraesCS3B01G424800 chr3A 640679082 640682569 3487 True 893.500000 1269 90.894500 1167 3537 2 chr3A.!!$R4 2370
11 TraesCS3B01G424800 chr3A 736808671 736809357 686 True 874.000000 874 89.680000 3851 4535 1 chr3A.!!$R3 684
12 TraesCS3B01G424800 chr3A 640748983 640752570 3587 True 603.100000 1661 87.120000 484 3561 6 chr3A.!!$R6 3077
13 TraesCS3B01G424800 chr5B 426558280 426559158 878 True 1140.000000 1140 90.147000 2660 3537 1 chr5B.!!$R1 877
14 TraesCS3B01G424800 chr5B 426565144 426566313 1169 True 526.000000 680 85.075000 913 1955 2 chr5B.!!$R2 1042
15 TraesCS3B01G424800 chr7D 54922291 54926994 4703 True 751.000000 1099 86.708333 966 3553 3 chr7D.!!$R1 2587
16 TraesCS3B01G424800 chr2D 632804356 632805040 684 False 1014.000000 1014 93.431000 3852 4535 1 chr2D.!!$F1 683
17 TraesCS3B01G424800 chr2D 527523743 527524428 685 True 894.000000 894 90.233000 3852 4535 1 chr2D.!!$R2 683
18 TraesCS3B01G424800 chr4A 624133315 624134002 687 True 953.000000 953 91.739000 3850 4535 1 chr4A.!!$R1 685
19 TraesCS3B01G424800 chr4A 670835316 670836192 876 False 952.000000 952 86.261000 2667 3552 1 chr4A.!!$F1 885
20 TraesCS3B01G424800 chr5D 313114645 313115328 683 True 918.000000 918 90.936000 3853 4535 1 chr5D.!!$R1 682
21 TraesCS3B01G424800 chr6D 316094198 316094827 629 True 913.000000 913 92.767000 3852 4486 1 chr6D.!!$R1 634
22 TraesCS3B01G424800 chrUn 108305748 108306432 684 True 893.000000 893 90.233000 3852 4535 1 chrUn.!!$R1 683
23 TraesCS3B01G424800 chr7A 650613450 650614135 685 True 878.000000 878 89.811000 3852 4535 1 chr7A.!!$R2 683
24 TraesCS3B01G424800 chr7A 58208506 58209618 1112 False 576.500000 822 86.276000 997 2024 2 chr7A.!!$F2 1027

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
202 221 0.391661 AACCTATCCTGCTGTGTGCG 60.392 55.0 0.00 0.0 46.63 5.34 F
616 652 0.459585 CATGCACTCCAATTGGCAGC 60.460 55.0 20.33 21.0 39.95 5.25 F
1985 2986 0.674895 GCTCCCACTTGCATCGTTCT 60.675 55.0 0.00 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1126 1261 0.179037 CCACCAGATGCCACGATGAT 60.179 55.0 0.0 0.00 0.00 2.45 R
2292 4981 0.170561 AAGGAGCACTACGTAGCGTG 59.829 55.0 22.4 15.56 41.39 5.34 R
3658 7967 0.036010 CTTCCTGACAGCCACCGATT 60.036 55.0 0.0 0.00 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 5.813080 TCAGTTCTCATTCGAGTAATCGA 57.187 39.130 11.80 11.80 40.44 3.59
40 41 4.601621 TCGAGTAATCGACTGAGACAAG 57.398 45.455 11.80 0.00 39.06 3.16
51 52 2.846206 ACTGAGACAAGGGCATTCCATA 59.154 45.455 0.00 0.00 38.24 2.74
56 57 3.053395 AGACAAGGGCATTCCATACACAT 60.053 43.478 0.00 0.00 38.24 3.21
57 58 3.701040 GACAAGGGCATTCCATACACATT 59.299 43.478 0.00 0.00 38.24 2.71
58 59 3.701040 ACAAGGGCATTCCATACACATTC 59.299 43.478 0.00 0.00 38.24 2.67
68 84 3.761752 TCCATACACATTCTCACTCGTGA 59.238 43.478 0.00 0.00 38.06 4.35
75 91 1.452953 TTCTCACTCGTGACAGCCGT 61.453 55.000 0.00 0.00 35.46 5.68
76 92 1.442857 CTCACTCGTGACAGCCGTC 60.443 63.158 0.00 0.00 42.93 4.79
86 105 2.743928 CAGCCGTCCCTTGTCTGC 60.744 66.667 0.00 0.00 0.00 4.26
88 107 2.743928 GCCGTCCCTTGTCTGCTG 60.744 66.667 0.00 0.00 0.00 4.41
111 130 4.552767 GCGTGTAAGATGCCATCATGTAAC 60.553 45.833 7.56 0.00 31.96 2.50
122 141 4.096382 GCCATCATGTAACTAACACCAAGG 59.904 45.833 0.00 0.00 42.09 3.61
151 170 2.486951 GCATTCACATCCATGCACTC 57.513 50.000 0.00 0.00 44.49 3.51
152 171 1.746787 GCATTCACATCCATGCACTCA 59.253 47.619 0.00 0.00 44.49 3.41
169 188 5.363292 TGCACTCAAATTGGCACCATTATAT 59.637 36.000 0.00 0.00 0.00 0.86
202 221 0.391661 AACCTATCCTGCTGTGTGCG 60.392 55.000 0.00 0.00 46.63 5.34
305 325 0.755686 TTTTGACCAATGTGCACCCC 59.244 50.000 15.69 0.00 0.00 4.95
409 429 4.299586 TCAAGGCCATTTACTCATGACA 57.700 40.909 5.01 0.00 0.00 3.58
417 437 6.265196 GGCCATTTACTCATGACATTCCATAA 59.735 38.462 0.00 0.00 0.00 1.90
427 447 7.764331 TCATGACATTCCATAAACACATTCTG 58.236 34.615 0.00 0.00 0.00 3.02
453 476 3.150767 AGGAGTATTACTCTAGCCAGCG 58.849 50.000 20.36 0.00 44.46 5.18
466 489 2.442056 CCAGCGGGCCTAGTTAGAT 58.558 57.895 0.84 0.00 0.00 1.98
470 493 1.838077 AGCGGGCCTAGTTAGATTGTT 59.162 47.619 0.84 0.00 0.00 2.83
471 494 3.036091 AGCGGGCCTAGTTAGATTGTTA 58.964 45.455 0.84 0.00 0.00 2.41
472 495 3.129109 GCGGGCCTAGTTAGATTGTTAC 58.871 50.000 0.84 0.00 0.00 2.50
473 496 3.181468 GCGGGCCTAGTTAGATTGTTACT 60.181 47.826 0.84 0.00 0.00 2.24
474 497 4.038402 GCGGGCCTAGTTAGATTGTTACTA 59.962 45.833 0.84 0.00 0.00 1.82
475 498 5.527033 CGGGCCTAGTTAGATTGTTACTAC 58.473 45.833 0.84 0.00 0.00 2.73
476 499 5.508657 CGGGCCTAGTTAGATTGTTACTACC 60.509 48.000 0.84 0.00 0.00 3.18
477 500 5.601729 GGGCCTAGTTAGATTGTTACTACCT 59.398 44.000 0.84 0.00 0.00 3.08
478 501 6.239261 GGGCCTAGTTAGATTGTTACTACCTC 60.239 46.154 0.84 0.00 0.00 3.85
479 502 6.239261 GGCCTAGTTAGATTGTTACTACCTCC 60.239 46.154 0.00 0.00 0.00 4.30
480 503 6.514705 GCCTAGTTAGATTGTTACTACCTCCG 60.515 46.154 0.00 0.00 0.00 4.63
481 504 6.545298 CCTAGTTAGATTGTTACTACCTCCGT 59.455 42.308 0.00 0.00 0.00 4.69
482 505 6.205101 AGTTAGATTGTTACTACCTCCGTG 57.795 41.667 0.00 0.00 0.00 4.94
615 651 1.135199 GTCATGCACTCCAATTGGCAG 60.135 52.381 20.33 18.55 39.95 4.85
616 652 0.459585 CATGCACTCCAATTGGCAGC 60.460 55.000 20.33 21.00 39.95 5.25
617 653 1.610554 ATGCACTCCAATTGGCAGCC 61.611 55.000 20.33 3.66 39.95 4.85
618 654 2.277591 GCACTCCAATTGGCAGCCA 61.278 57.895 20.33 11.22 34.44 4.75
633 669 2.615493 GCAGCCACCTTATATACGCCAT 60.615 50.000 0.00 0.00 0.00 4.40
635 671 4.072131 CAGCCACCTTATATACGCCATTT 58.928 43.478 0.00 0.00 0.00 2.32
640 676 7.040686 AGCCACCTTATATACGCCATTTTAAAG 60.041 37.037 0.00 0.00 0.00 1.85
641 677 7.255346 GCCACCTTATATACGCCATTTTAAAGT 60.255 37.037 0.00 0.00 0.00 2.66
723 760 2.036992 CTCTCAACTCTCAAGTGGCAGT 59.963 50.000 0.00 0.00 35.36 4.40
773 825 2.098117 GCTAGCCAAATGCAATCTCGTT 59.902 45.455 2.29 0.00 44.83 3.85
806 858 5.568296 CGAAAGGGACGAGATAAATATCGAC 59.432 44.000 13.40 7.35 43.57 4.20
817 869 6.509656 AGATAAATATCGACAACGTAAGGCA 58.490 36.000 0.00 0.00 38.75 4.75
843 931 1.735386 CAGAGGAAGGTCGTCGAGTA 58.265 55.000 0.00 0.00 36.48 2.59
879 977 5.077564 AGGTATGTTTTCTTGGACCCTTTC 58.922 41.667 0.00 0.00 0.00 2.62
892 993 5.183228 TGGACCCTTTCATCTCGATTAAAC 58.817 41.667 0.00 0.00 0.00 2.01
909 1010 8.696374 TCGATTAAACTCTCAACCATCTTAGAT 58.304 33.333 0.00 0.00 0.00 1.98
921 1022 7.704899 TCAACCATCTTAGATATTGTACGTGTG 59.295 37.037 14.25 1.93 0.00 3.82
927 1028 4.202245 AGATATTGTACGTGTGGTGCTT 57.798 40.909 0.00 0.00 31.78 3.91
928 1029 4.181578 AGATATTGTACGTGTGGTGCTTC 58.818 43.478 0.00 0.00 31.78 3.86
929 1030 2.543777 ATTGTACGTGTGGTGCTTCT 57.456 45.000 0.00 0.00 31.78 2.85
949 1050 6.773976 TTCTTCTGAAGTGGTTTCATTTGT 57.226 33.333 16.43 0.00 44.48 2.83
994 1096 3.353836 CACCCGGCCGAACTGTTG 61.354 66.667 30.73 7.66 0.00 3.33
1126 1261 4.150804 GCAACCTTTTCGTTTTGTTGTTGA 59.849 37.500 0.00 0.00 38.75 3.18
1162 1363 2.421073 GGTGGGCCTGTTAATTAACGAC 59.579 50.000 20.51 11.19 39.00 4.34
1316 1525 4.954970 ACCAACTGGCAGGGCACG 62.955 66.667 20.34 3.72 39.32 5.34
1406 1615 2.104170 GTCTTCCTCCTCATCTCCGTT 58.896 52.381 0.00 0.00 0.00 4.44
1409 1701 1.144936 CCTCCTCATCTCCGTTGCC 59.855 63.158 0.00 0.00 0.00 4.52
1411 1792 2.892425 CCTCATCTCCGTTGCCGC 60.892 66.667 0.00 0.00 0.00 6.53
1825 2824 2.029073 CAGGAAGTGCGACGTGGT 59.971 61.111 0.00 0.00 0.00 4.16
1948 2948 2.031163 GGCTCAGTGTCCGTGCTT 59.969 61.111 0.00 0.00 0.00 3.91
1969 2970 3.869272 CCGTCGCTGGCATTGCTC 61.869 66.667 8.82 0.00 0.00 4.26
1985 2986 0.674895 GCTCCCACTTGCATCGTTCT 60.675 55.000 0.00 0.00 0.00 3.01
1999 3000 4.377841 GCATCGTTCTTCTTTTCTGTCCAG 60.378 45.833 0.00 0.00 0.00 3.86
2004 3005 5.050972 CGTTCTTCTTTTCTGTCCAGTGTAC 60.051 44.000 0.00 0.00 0.00 2.90
2012 3013 4.635699 TCTGTCCAGTGTACTAGTCTCA 57.364 45.455 0.00 0.00 0.00 3.27
2020 3021 6.151312 TCCAGTGTACTAGTCTCAATCAAGTC 59.849 42.308 0.00 0.00 0.00 3.01
2031 3032 4.515191 TCTCAATCAAGTCAAGTTTTCCGG 59.485 41.667 0.00 0.00 0.00 5.14
2105 3318 4.046462 TCACCACGTACTTTTCTTTCGAG 58.954 43.478 0.00 0.00 0.00 4.04
2106 3319 3.800506 CACCACGTACTTTTCTTTCGAGT 59.199 43.478 0.00 0.00 0.00 4.18
2108 3321 3.362693 CCACGTACTTTTCTTTCGAGTGC 60.363 47.826 0.00 0.00 0.00 4.40
2138 3373 4.261114 GGACCAGACGTAGCTAATCTGTAC 60.261 50.000 24.49 19.20 38.56 2.90
2144 3379 5.357314 AGACGTAGCTAATCTGTACATGTGT 59.643 40.000 9.11 0.00 0.00 3.72
2209 4898 5.710099 TGAATTGGCGAGATACTTTTCCTTT 59.290 36.000 0.00 0.00 0.00 3.11
2210 4899 5.819825 ATTGGCGAGATACTTTTCCTTTC 57.180 39.130 0.00 0.00 0.00 2.62
2240 4929 2.822701 GGGCCGGGCGAGTAAAAG 60.823 66.667 23.19 0.00 0.00 2.27
2282 4971 3.642755 CACGTTCTGTGGTGCCTC 58.357 61.111 0.00 0.00 45.21 4.70
2283 4972 2.029073 ACGTTCTGTGGTGCCTCG 59.971 61.111 0.00 0.00 0.00 4.63
2285 4974 1.734477 CGTTCTGTGGTGCCTCGAG 60.734 63.158 5.13 5.13 0.00 4.04
2286 4975 1.374758 GTTCTGTGGTGCCTCGAGG 60.375 63.158 27.83 27.83 38.53 4.63
2287 4976 2.583441 TTCTGTGGTGCCTCGAGGG 61.583 63.158 32.06 14.05 35.18 4.30
2305 4994 3.359733 CGTGCACGCTACGTAGTG 58.640 61.111 29.66 29.66 45.73 2.74
2309 4998 4.379221 CACGCTACGTAGTGCTCC 57.621 61.111 30.84 10.97 45.73 4.70
2310 4999 1.801332 CACGCTACGTAGTGCTCCT 59.199 57.895 30.84 12.80 45.73 3.69
2311 5000 0.170561 CACGCTACGTAGTGCTCCTT 59.829 55.000 30.84 12.45 45.73 3.36
2314 5003 0.815734 GCTACGTAGTGCTCCTTCCA 59.184 55.000 22.98 0.00 45.73 3.53
2315 5004 1.409427 GCTACGTAGTGCTCCTTCCAT 59.591 52.381 22.98 0.00 45.73 3.41
2316 5005 2.159085 GCTACGTAGTGCTCCTTCCATT 60.159 50.000 22.98 0.00 45.73 3.16
2317 5006 3.679083 GCTACGTAGTGCTCCTTCCATTT 60.679 47.826 22.98 0.00 45.73 2.32
2320 5009 2.354704 CGTAGTGCTCCTTCCATTTGGA 60.355 50.000 0.00 0.00 43.73 3.53
2321 5010 6.323676 ACGTAGTGCTCCTTCCATTTGGAA 62.324 45.833 11.40 11.40 46.82 3.53
2335 5024 7.773489 TCCATTTGGAAATACTTGTCATCAA 57.227 32.000 0.00 0.00 42.18 2.57
2336 5025 8.187913 TCCATTTGGAAATACTTGTCATCAAA 57.812 30.769 0.00 0.00 42.18 2.69
2337 5026 8.646004 TCCATTTGGAAATACTTGTCATCAAAA 58.354 29.630 0.00 0.00 42.18 2.44
2338 5027 9.439500 CCATTTGGAAATACTTGTCATCAAAAT 57.561 29.630 0.00 0.00 37.39 1.82
2390 5799 5.697473 TTTTGATGACAAGTATTTGCGGA 57.303 34.783 0.00 0.00 37.85 5.54
2391 5800 4.678509 TTGATGACAAGTATTTGCGGAC 57.321 40.909 0.00 0.00 37.85 4.79
2393 5802 1.434555 TGACAAGTATTTGCGGACGG 58.565 50.000 0.00 0.00 37.85 4.79
2394 5803 1.001068 TGACAAGTATTTGCGGACGGA 59.999 47.619 0.00 0.00 37.85 4.69
2395 5804 1.659098 GACAAGTATTTGCGGACGGAG 59.341 52.381 0.00 0.00 37.85 4.63
2430 5839 7.158697 TCGTTCCATTTCACTCTGAAGATAAA 58.841 34.615 0.00 0.00 37.70 1.40
2432 5841 8.454106 CGTTCCATTTCACTCTGAAGATAAATT 58.546 33.333 0.00 0.00 37.70 1.82
2433 5842 9.565213 GTTCCATTTCACTCTGAAGATAAATTG 57.435 33.333 0.00 0.00 37.70 2.32
2434 5843 7.765307 TCCATTTCACTCTGAAGATAAATTGC 58.235 34.615 0.00 0.00 37.70 3.56
2435 5844 7.394077 TCCATTTCACTCTGAAGATAAATTGCA 59.606 33.333 0.00 0.00 37.70 4.08
2436 5845 7.487189 CCATTTCACTCTGAAGATAAATTGCAC 59.513 37.037 0.00 0.00 37.70 4.57
2460 6029 3.315191 TGGAAAGAAAAGAAGCTTGTCGG 59.685 43.478 2.10 0.00 0.00 4.79
2469 6038 3.422303 GCTTGTCGGATGCACGCA 61.422 61.111 0.00 0.00 32.38 5.24
2508 6077 3.726291 TTTCCTTCCTTTTGCTTTCGG 57.274 42.857 0.00 0.00 0.00 4.30
2518 6087 0.394488 TTGCTTTCGGTGGTGGTTCA 60.394 50.000 0.00 0.00 0.00 3.18
2555 6124 0.939419 ACACGCCGTACAGGAAAAAC 59.061 50.000 7.77 0.00 45.00 2.43
2640 6934 1.507713 CAACTTGACGATGCGTGCG 60.508 57.895 0.00 0.00 41.37 5.34
2641 6935 1.954146 AACTTGACGATGCGTGCGT 60.954 52.632 0.00 3.57 41.37 5.24
2707 7012 0.247460 TTGCTGTCGATCACTCAGGG 59.753 55.000 9.67 0.00 0.00 4.45
2853 7158 4.005472 GGCATCATCTTCGCGGCG 62.005 66.667 17.70 17.70 0.00 6.46
3423 7731 1.484653 TGGATTCCCGACGACATCAAT 59.515 47.619 0.00 0.00 34.29 2.57
3538 7846 2.515854 AGAAGACCGCTGACTGAACTA 58.484 47.619 0.00 0.00 0.00 2.24
3561 7870 3.423571 GAGATCACTGTACCGTAACGTG 58.576 50.000 0.00 3.27 0.00 4.49
3562 7871 3.076621 AGATCACTGTACCGTAACGTGA 58.923 45.455 11.46 11.46 37.33 4.35
3563 7872 3.693085 AGATCACTGTACCGTAACGTGAT 59.307 43.478 17.45 17.45 41.65 3.06
3564 7873 3.206034 TCACTGTACCGTAACGTGATG 57.794 47.619 0.00 0.00 32.20 3.07
3565 7874 2.813172 TCACTGTACCGTAACGTGATGA 59.187 45.455 0.00 0.00 32.20 2.92
3566 7875 3.252944 TCACTGTACCGTAACGTGATGAA 59.747 43.478 0.00 0.00 32.20 2.57
3567 7876 4.082625 TCACTGTACCGTAACGTGATGAAT 60.083 41.667 0.00 0.00 32.20 2.57
3568 7877 4.624024 CACTGTACCGTAACGTGATGAATT 59.376 41.667 0.00 0.00 0.00 2.17
3569 7878 4.624024 ACTGTACCGTAACGTGATGAATTG 59.376 41.667 0.00 0.00 0.00 2.32
3570 7879 3.927758 TGTACCGTAACGTGATGAATTGG 59.072 43.478 0.00 0.00 0.00 3.16
3571 7880 3.322211 ACCGTAACGTGATGAATTGGA 57.678 42.857 0.00 0.00 0.00 3.53
3572 7881 3.666274 ACCGTAACGTGATGAATTGGAA 58.334 40.909 0.00 0.00 0.00 3.53
3573 7882 4.066490 ACCGTAACGTGATGAATTGGAAA 58.934 39.130 0.00 0.00 0.00 3.13
3574 7883 4.083696 ACCGTAACGTGATGAATTGGAAAC 60.084 41.667 0.00 0.00 0.00 2.78
3575 7884 4.079028 CGTAACGTGATGAATTGGAAACG 58.921 43.478 0.00 0.00 37.09 3.60
3576 7885 3.552604 AACGTGATGAATTGGAAACGG 57.447 42.857 0.00 0.00 35.45 4.44
3577 7886 2.773487 ACGTGATGAATTGGAAACGGA 58.227 42.857 0.00 0.00 35.45 4.69
3578 7887 3.142951 ACGTGATGAATTGGAAACGGAA 58.857 40.909 0.00 0.00 35.45 4.30
3579 7888 3.566322 ACGTGATGAATTGGAAACGGAAA 59.434 39.130 0.00 0.00 35.45 3.13
3580 7889 3.911964 CGTGATGAATTGGAAACGGAAAC 59.088 43.478 0.00 0.00 0.00 2.78
3581 7890 4.234574 GTGATGAATTGGAAACGGAAACC 58.765 43.478 0.00 0.00 0.00 3.27
3582 7891 4.022329 GTGATGAATTGGAAACGGAAACCT 60.022 41.667 0.00 0.00 0.00 3.50
3583 7892 4.022416 TGATGAATTGGAAACGGAAACCTG 60.022 41.667 0.00 0.00 0.00 4.00
3584 7893 3.556999 TGAATTGGAAACGGAAACCTGA 58.443 40.909 0.00 0.00 0.00 3.86
3585 7894 3.316868 TGAATTGGAAACGGAAACCTGAC 59.683 43.478 0.00 0.00 0.00 3.51
3586 7895 1.301423 TTGGAAACGGAAACCTGACG 58.699 50.000 0.00 0.00 0.00 4.35
3587 7896 0.178533 TGGAAACGGAAACCTGACGT 59.821 50.000 0.00 0.00 43.43 4.34
3588 7897 0.863799 GGAAACGGAAACCTGACGTC 59.136 55.000 9.11 9.11 40.31 4.34
3589 7898 0.863799 GAAACGGAAACCTGACGTCC 59.136 55.000 14.12 0.00 40.31 4.79
3590 7899 0.466963 AAACGGAAACCTGACGTCCT 59.533 50.000 14.12 0.00 40.31 3.85
3591 7900 1.331214 AACGGAAACCTGACGTCCTA 58.669 50.000 14.12 0.00 40.31 2.94
3592 7901 1.553706 ACGGAAACCTGACGTCCTAT 58.446 50.000 14.12 0.00 35.77 2.57
3593 7902 1.475682 ACGGAAACCTGACGTCCTATC 59.524 52.381 14.12 4.38 35.77 2.08
3594 7903 1.202382 CGGAAACCTGACGTCCTATCC 60.202 57.143 14.12 12.15 0.00 2.59
3595 7904 2.108970 GGAAACCTGACGTCCTATCCT 58.891 52.381 14.12 0.00 0.00 3.24
3596 7905 2.500504 GGAAACCTGACGTCCTATCCTT 59.499 50.000 14.12 0.00 0.00 3.36
3597 7906 3.430513 GGAAACCTGACGTCCTATCCTTC 60.431 52.174 14.12 8.16 0.00 3.46
3598 7907 2.830651 ACCTGACGTCCTATCCTTCT 57.169 50.000 14.12 0.00 0.00 2.85
3599 7908 2.379972 ACCTGACGTCCTATCCTTCTG 58.620 52.381 14.12 0.00 0.00 3.02
3600 7909 1.683917 CCTGACGTCCTATCCTTCTGG 59.316 57.143 14.12 0.00 0.00 3.86
3601 7910 2.379972 CTGACGTCCTATCCTTCTGGT 58.620 52.381 14.12 0.00 34.23 4.00
3602 7911 3.552875 CTGACGTCCTATCCTTCTGGTA 58.447 50.000 14.12 0.00 34.23 3.25
3603 7912 3.952323 CTGACGTCCTATCCTTCTGGTAA 59.048 47.826 14.12 0.00 34.23 2.85
3604 7913 3.952323 TGACGTCCTATCCTTCTGGTAAG 59.048 47.826 14.12 0.00 34.23 2.34
3605 7914 2.694109 ACGTCCTATCCTTCTGGTAAGC 59.306 50.000 0.00 0.00 34.23 3.09
3606 7915 2.693591 CGTCCTATCCTTCTGGTAAGCA 59.306 50.000 0.00 0.00 34.23 3.91
3607 7916 3.322254 CGTCCTATCCTTCTGGTAAGCAT 59.678 47.826 0.00 0.00 34.23 3.79
3608 7917 4.523173 CGTCCTATCCTTCTGGTAAGCATA 59.477 45.833 0.00 0.00 34.23 3.14
3609 7918 5.336055 CGTCCTATCCTTCTGGTAAGCATAG 60.336 48.000 0.00 0.00 34.23 2.23
3610 7919 5.046950 GTCCTATCCTTCTGGTAAGCATAGG 60.047 48.000 8.00 8.00 34.23 2.57
3611 7920 5.087323 CCTATCCTTCTGGTAAGCATAGGA 58.913 45.833 8.47 6.59 36.33 2.94
3612 7921 5.544176 CCTATCCTTCTGGTAAGCATAGGAA 59.456 44.000 8.47 0.00 35.58 3.36
3613 7922 5.975988 ATCCTTCTGGTAAGCATAGGAAA 57.024 39.130 0.00 0.00 35.58 3.13
3614 7923 5.359194 TCCTTCTGGTAAGCATAGGAAAG 57.641 43.478 0.00 0.00 34.23 2.62
3615 7924 3.879892 CCTTCTGGTAAGCATAGGAAAGC 59.120 47.826 0.00 0.00 0.00 3.51
3616 7925 4.517285 CTTCTGGTAAGCATAGGAAAGCA 58.483 43.478 0.00 0.00 0.00 3.91
3617 7926 4.778213 TCTGGTAAGCATAGGAAAGCAT 57.222 40.909 0.00 0.00 0.00 3.79
3618 7927 5.887214 TCTGGTAAGCATAGGAAAGCATA 57.113 39.130 0.00 0.00 0.00 3.14
3619 7928 5.858381 TCTGGTAAGCATAGGAAAGCATAG 58.142 41.667 0.00 0.00 0.00 2.23
3620 7929 4.389374 TGGTAAGCATAGGAAAGCATAGC 58.611 43.478 0.00 0.00 34.25 2.97
3621 7930 4.141505 TGGTAAGCATAGGAAAGCATAGCA 60.142 41.667 0.00 0.00 39.24 3.49
3622 7931 4.214332 GGTAAGCATAGGAAAGCATAGCAC 59.786 45.833 0.00 0.00 33.96 4.40
3623 7932 2.487934 AGCATAGGAAAGCATAGCACG 58.512 47.619 0.00 0.00 0.00 5.34
3624 7933 1.532868 GCATAGGAAAGCATAGCACGG 59.467 52.381 0.00 0.00 0.00 4.94
3625 7934 2.838736 CATAGGAAAGCATAGCACGGT 58.161 47.619 0.00 0.00 0.00 4.83
3626 7935 2.309528 TAGGAAAGCATAGCACGGTG 57.690 50.000 3.15 3.15 0.00 4.94
3627 7936 0.392998 AGGAAAGCATAGCACGGTGG 60.393 55.000 10.60 0.00 0.00 4.61
3628 7937 0.676782 GGAAAGCATAGCACGGTGGT 60.677 55.000 17.69 17.69 0.00 4.16
3629 7938 1.406341 GGAAAGCATAGCACGGTGGTA 60.406 52.381 20.86 20.86 34.60 3.25
3630 7939 2.561569 GAAAGCATAGCACGGTGGTAT 58.438 47.619 23.21 23.21 41.25 2.73
3631 7940 3.493699 GGAAAGCATAGCACGGTGGTATA 60.494 47.826 26.87 8.71 38.83 1.47
3632 7941 2.814280 AGCATAGCACGGTGGTATAC 57.186 50.000 26.87 22.54 38.83 1.47
3633 7942 1.343465 AGCATAGCACGGTGGTATACC 59.657 52.381 26.87 20.91 46.56 2.73
3651 7960 2.903926 ACCTACTGGTAACCTTGCTCT 58.096 47.619 0.00 0.00 46.43 4.09
3652 7961 2.567615 ACCTACTGGTAACCTTGCTCTG 59.432 50.000 0.00 0.00 46.43 3.35
3653 7962 2.093447 CCTACTGGTAACCTTGCTCTGG 60.093 54.545 0.00 0.00 0.00 3.86
3654 7963 1.729586 ACTGGTAACCTTGCTCTGGA 58.270 50.000 0.00 0.00 0.00 3.86
3655 7964 2.054799 ACTGGTAACCTTGCTCTGGAA 58.945 47.619 0.00 0.00 0.00 3.53
3656 7965 2.441750 ACTGGTAACCTTGCTCTGGAAA 59.558 45.455 0.00 0.00 0.00 3.13
3657 7966 3.117663 ACTGGTAACCTTGCTCTGGAAAA 60.118 43.478 0.00 0.00 0.00 2.29
3658 7967 3.888930 CTGGTAACCTTGCTCTGGAAAAA 59.111 43.478 0.00 0.00 0.00 1.94
3674 7983 1.247567 AAAAATCGGTGGCTGTCAGG 58.752 50.000 1.14 0.00 0.00 3.86
3675 7984 0.400213 AAAATCGGTGGCTGTCAGGA 59.600 50.000 1.14 0.00 0.00 3.86
3676 7985 0.400213 AAATCGGTGGCTGTCAGGAA 59.600 50.000 1.14 0.00 0.00 3.36
3677 7986 0.036010 AATCGGTGGCTGTCAGGAAG 60.036 55.000 1.14 0.00 0.00 3.46
3678 7987 1.903877 ATCGGTGGCTGTCAGGAAGG 61.904 60.000 1.14 0.00 0.00 3.46
3679 7988 2.583441 CGGTGGCTGTCAGGAAGGA 61.583 63.158 1.14 0.00 0.00 3.36
3680 7989 1.003233 GGTGGCTGTCAGGAAGGAC 60.003 63.158 1.14 0.00 38.29 3.85
3681 7990 1.484444 GGTGGCTGTCAGGAAGGACT 61.484 60.000 1.14 0.00 38.61 3.85
3682 7991 0.398318 GTGGCTGTCAGGAAGGACTT 59.602 55.000 1.14 0.00 38.61 3.01
3683 7992 1.140312 TGGCTGTCAGGAAGGACTTT 58.860 50.000 1.14 0.00 38.61 2.66
3684 7993 1.072331 TGGCTGTCAGGAAGGACTTTC 59.928 52.381 1.14 0.00 38.61 2.62
3685 7994 1.072331 GGCTGTCAGGAAGGACTTTCA 59.928 52.381 1.14 0.00 38.61 2.69
3686 7995 2.487265 GGCTGTCAGGAAGGACTTTCAA 60.487 50.000 1.14 0.00 38.61 2.69
3687 7996 2.550180 GCTGTCAGGAAGGACTTTCAAC 59.450 50.000 1.14 0.00 38.61 3.18
3688 7997 3.745797 GCTGTCAGGAAGGACTTTCAACT 60.746 47.826 1.14 0.00 38.61 3.16
3689 7998 4.061596 CTGTCAGGAAGGACTTTCAACTC 58.938 47.826 0.00 0.00 38.61 3.01
3690 7999 3.711704 TGTCAGGAAGGACTTTCAACTCT 59.288 43.478 0.00 0.00 38.61 3.24
3691 8000 4.202264 TGTCAGGAAGGACTTTCAACTCTC 60.202 45.833 0.00 0.00 38.61 3.20
3692 8001 4.039852 GTCAGGAAGGACTTTCAACTCTCT 59.960 45.833 0.00 0.00 37.54 3.10
3693 8002 4.656112 TCAGGAAGGACTTTCAACTCTCTT 59.344 41.667 0.00 0.00 37.54 2.85
3694 8003 4.994217 CAGGAAGGACTTTCAACTCTCTTC 59.006 45.833 0.00 0.00 37.54 2.87
3695 8004 4.904853 AGGAAGGACTTTCAACTCTCTTCT 59.095 41.667 0.00 0.00 37.54 2.85
3696 8005 5.011635 AGGAAGGACTTTCAACTCTCTTCTC 59.988 44.000 0.00 0.00 37.54 2.87
3697 8006 5.221541 GGAAGGACTTTCAACTCTCTTCTCA 60.222 44.000 0.00 0.00 37.54 3.27
3698 8007 6.432403 AAGGACTTTCAACTCTCTTCTCAT 57.568 37.500 0.00 0.00 0.00 2.90
3699 8008 6.036577 AGGACTTTCAACTCTCTTCTCATC 57.963 41.667 0.00 0.00 0.00 2.92
3700 8009 5.046663 AGGACTTTCAACTCTCTTCTCATCC 60.047 44.000 0.00 0.00 0.00 3.51
3701 8010 5.046663 GGACTTTCAACTCTCTTCTCATCCT 60.047 44.000 0.00 0.00 0.00 3.24
3702 8011 6.153680 GGACTTTCAACTCTCTTCTCATCCTA 59.846 42.308 0.00 0.00 0.00 2.94
3703 8012 6.930731 ACTTTCAACTCTCTTCTCATCCTAC 58.069 40.000 0.00 0.00 0.00 3.18
3704 8013 6.723977 ACTTTCAACTCTCTTCTCATCCTACT 59.276 38.462 0.00 0.00 0.00 2.57
3705 8014 6.767524 TTCAACTCTCTTCTCATCCTACTC 57.232 41.667 0.00 0.00 0.00 2.59
3706 8015 5.821097 TCAACTCTCTTCTCATCCTACTCA 58.179 41.667 0.00 0.00 0.00 3.41
3707 8016 6.430864 TCAACTCTCTTCTCATCCTACTCAT 58.569 40.000 0.00 0.00 0.00 2.90
3708 8017 6.320926 TCAACTCTCTTCTCATCCTACTCATG 59.679 42.308 0.00 0.00 0.00 3.07
3709 8018 4.584325 ACTCTCTTCTCATCCTACTCATGC 59.416 45.833 0.00 0.00 0.00 4.06
3710 8019 4.540715 TCTCTTCTCATCCTACTCATGCA 58.459 43.478 0.00 0.00 0.00 3.96
3711 8020 5.146298 TCTCTTCTCATCCTACTCATGCAT 58.854 41.667 0.00 0.00 0.00 3.96
3712 8021 5.601729 TCTCTTCTCATCCTACTCATGCATT 59.398 40.000 0.00 0.00 0.00 3.56
3713 8022 6.099413 TCTCTTCTCATCCTACTCATGCATTT 59.901 38.462 0.00 0.00 0.00 2.32
3714 8023 6.286758 TCTTCTCATCCTACTCATGCATTTC 58.713 40.000 0.00 0.00 0.00 2.17
3715 8024 5.619132 TCTCATCCTACTCATGCATTTCA 57.381 39.130 0.00 0.00 0.00 2.69
3716 8025 5.608449 TCTCATCCTACTCATGCATTTCAG 58.392 41.667 0.00 0.00 0.00 3.02
3717 8026 5.129980 TCTCATCCTACTCATGCATTTCAGT 59.870 40.000 0.00 1.98 0.00 3.41
3718 8027 5.121105 TCATCCTACTCATGCATTTCAGTG 58.879 41.667 11.42 0.00 0.00 3.66
3719 8028 4.558226 TCCTACTCATGCATTTCAGTGT 57.442 40.909 11.42 4.42 0.00 3.55
3720 8029 4.910195 TCCTACTCATGCATTTCAGTGTT 58.090 39.130 11.42 0.00 0.00 3.32
3721 8030 4.937620 TCCTACTCATGCATTTCAGTGTTC 59.062 41.667 11.42 0.00 0.00 3.18
3722 8031 3.818961 ACTCATGCATTTCAGTGTTCG 57.181 42.857 0.00 0.00 0.00 3.95
3723 8032 3.402110 ACTCATGCATTTCAGTGTTCGA 58.598 40.909 0.00 0.00 0.00 3.71
3724 8033 3.187227 ACTCATGCATTTCAGTGTTCGAC 59.813 43.478 0.00 0.00 0.00 4.20
3725 8034 3.137533 TCATGCATTTCAGTGTTCGACA 58.862 40.909 0.00 0.00 0.00 4.35
3726 8035 3.563390 TCATGCATTTCAGTGTTCGACAA 59.437 39.130 0.00 0.00 0.00 3.18
3727 8036 4.216042 TCATGCATTTCAGTGTTCGACAAT 59.784 37.500 0.00 0.00 0.00 2.71
3728 8037 5.411053 TCATGCATTTCAGTGTTCGACAATA 59.589 36.000 0.00 0.00 0.00 1.90
3729 8038 5.878332 TGCATTTCAGTGTTCGACAATAT 57.122 34.783 0.00 0.00 0.00 1.28
3730 8039 6.252967 TGCATTTCAGTGTTCGACAATATT 57.747 33.333 0.00 0.00 0.00 1.28
3731 8040 6.676950 TGCATTTCAGTGTTCGACAATATTT 58.323 32.000 0.00 0.00 0.00 1.40
3732 8041 6.801377 TGCATTTCAGTGTTCGACAATATTTC 59.199 34.615 0.00 0.00 0.00 2.17
3733 8042 6.022251 GCATTTCAGTGTTCGACAATATTTCG 60.022 38.462 11.44 11.44 37.85 3.46
3734 8043 6.533819 TTTCAGTGTTCGACAATATTTCGT 57.466 33.333 15.04 0.29 37.73 3.85
3735 8044 5.509605 TCAGTGTTCGACAATATTTCGTG 57.490 39.130 15.04 9.03 37.73 4.35
3736 8045 4.387559 TCAGTGTTCGACAATATTTCGTGG 59.612 41.667 15.04 2.18 37.73 4.94
3737 8046 4.387559 CAGTGTTCGACAATATTTCGTGGA 59.612 41.667 15.04 4.09 37.73 4.02
3738 8047 4.387862 AGTGTTCGACAATATTTCGTGGAC 59.612 41.667 15.04 13.11 37.73 4.02
3739 8048 4.150980 GTGTTCGACAATATTTCGTGGACA 59.849 41.667 15.04 14.58 37.73 4.02
3740 8049 4.932799 TGTTCGACAATATTTCGTGGACAT 59.067 37.500 15.04 0.00 37.73 3.06
3741 8050 5.410132 TGTTCGACAATATTTCGTGGACATT 59.590 36.000 15.04 0.00 37.73 2.71
3742 8051 5.463499 TCGACAATATTTCGTGGACATTG 57.537 39.130 15.04 0.00 37.73 2.82
3743 8052 5.172205 TCGACAATATTTCGTGGACATTGA 58.828 37.500 15.04 0.00 37.73 2.57
3744 8053 5.290885 TCGACAATATTTCGTGGACATTGAG 59.709 40.000 15.04 0.00 37.73 3.02
3745 8054 5.063438 CGACAATATTTCGTGGACATTGAGT 59.937 40.000 10.15 0.00 32.29 3.41
3746 8055 6.254804 CGACAATATTTCGTGGACATTGAGTA 59.745 38.462 10.15 0.00 32.29 2.59
3747 8056 7.201487 CGACAATATTTCGTGGACATTGAGTAA 60.201 37.037 10.15 0.00 32.29 2.24
3748 8057 7.974675 ACAATATTTCGTGGACATTGAGTAAG 58.025 34.615 0.00 0.00 32.29 2.34
3749 8058 7.606456 ACAATATTTCGTGGACATTGAGTAAGT 59.394 33.333 0.00 0.00 32.29 2.24
3750 8059 8.450964 CAATATTTCGTGGACATTGAGTAAGTT 58.549 33.333 0.00 0.00 0.00 2.66
3751 8060 9.661563 AATATTTCGTGGACATTGAGTAAGTTA 57.338 29.630 0.00 0.00 0.00 2.24
3752 8061 6.774354 TTTCGTGGACATTGAGTAAGTTAC 57.226 37.500 4.78 4.78 0.00 2.50
3753 8062 4.813027 TCGTGGACATTGAGTAAGTTACC 58.187 43.478 9.46 2.45 0.00 2.85
3754 8063 3.611113 CGTGGACATTGAGTAAGTTACCG 59.389 47.826 9.46 0.00 0.00 4.02
3755 8064 3.930848 GTGGACATTGAGTAAGTTACCGG 59.069 47.826 9.46 0.00 0.00 5.28
3756 8065 2.934553 GGACATTGAGTAAGTTACCGGC 59.065 50.000 9.46 0.88 0.00 6.13
3757 8066 2.601763 GACATTGAGTAAGTTACCGGCG 59.398 50.000 9.46 0.00 0.00 6.46
3758 8067 2.231964 ACATTGAGTAAGTTACCGGCGA 59.768 45.455 9.30 0.69 0.00 5.54
3759 8068 2.352503 TTGAGTAAGTTACCGGCGAC 57.647 50.000 9.30 0.00 0.00 5.19
3771 8080 4.639824 GGCGACGTTGTGTAGTGA 57.360 55.556 4.37 0.00 0.00 3.41
3772 8081 2.139210 GGCGACGTTGTGTAGTGAC 58.861 57.895 4.37 0.00 0.00 3.67
3773 8082 0.595567 GGCGACGTTGTGTAGTGACA 60.596 55.000 4.37 0.00 0.00 3.58
3774 8083 1.415374 GCGACGTTGTGTAGTGACAT 58.585 50.000 4.37 0.00 38.04 3.06
3775 8084 1.124297 GCGACGTTGTGTAGTGACATG 59.876 52.381 4.37 0.00 38.04 3.21
3776 8085 2.657184 CGACGTTGTGTAGTGACATGA 58.343 47.619 0.00 0.00 38.04 3.07
3777 8086 2.656897 CGACGTTGTGTAGTGACATGAG 59.343 50.000 0.00 0.00 38.04 2.90
3778 8087 3.639538 GACGTTGTGTAGTGACATGAGT 58.360 45.455 0.00 0.00 38.04 3.41
3779 8088 3.381045 ACGTTGTGTAGTGACATGAGTG 58.619 45.455 0.00 0.00 38.04 3.51
3780 8089 2.731451 CGTTGTGTAGTGACATGAGTGG 59.269 50.000 0.00 0.00 38.04 4.00
3781 8090 2.455674 TGTGTAGTGACATGAGTGGC 57.544 50.000 0.00 0.00 38.04 5.01
3782 8091 1.691434 TGTGTAGTGACATGAGTGGCA 59.309 47.619 0.00 0.00 42.40 4.92
3789 8098 3.713858 TGACATGAGTGGCAAACTTTG 57.286 42.857 0.00 0.00 41.45 2.77
3801 8110 1.854126 CAAACTTTGCAACTCGCTTGG 59.146 47.619 0.00 0.00 43.06 3.61
3802 8111 0.249031 AACTTTGCAACTCGCTTGGC 60.249 50.000 0.00 0.00 43.06 4.52
3803 8112 1.359833 CTTTGCAACTCGCTTGGCA 59.640 52.632 0.00 0.00 43.06 4.92
3804 8113 0.662374 CTTTGCAACTCGCTTGGCAG 60.662 55.000 0.00 0.00 43.06 4.85
3805 8114 1.100463 TTTGCAACTCGCTTGGCAGA 61.100 50.000 0.00 0.00 43.06 4.26
3806 8115 1.509644 TTGCAACTCGCTTGGCAGAG 61.510 55.000 0.00 1.06 43.06 3.35
3807 8116 2.684843 GCAACTCGCTTGGCAGAGG 61.685 63.158 7.11 0.00 37.77 3.69
3808 8117 2.359230 AACTCGCTTGGCAGAGGC 60.359 61.111 7.11 3.65 35.05 4.70
3824 8133 4.002797 GCGGAGGCCAAGAATTGT 57.997 55.556 5.01 0.00 46.99 2.71
3825 8134 2.267045 GCGGAGGCCAAGAATTGTT 58.733 52.632 5.01 0.00 46.99 2.83
3826 8135 1.459450 GCGGAGGCCAAGAATTGTTA 58.541 50.000 5.01 0.00 46.99 2.41
3827 8136 1.401905 GCGGAGGCCAAGAATTGTTAG 59.598 52.381 5.01 0.00 46.99 2.34
3828 8137 1.401905 CGGAGGCCAAGAATTGTTAGC 59.598 52.381 5.01 0.00 46.99 3.09
3829 8138 1.751351 GGAGGCCAAGAATTGTTAGCC 59.249 52.381 15.56 15.56 46.99 3.93
3831 8140 1.459450 GGCCAAGAATTGTTAGCCGA 58.541 50.000 8.94 0.00 46.99 5.54
3832 8141 1.401905 GGCCAAGAATTGTTAGCCGAG 59.598 52.381 8.94 0.00 46.99 4.63
3833 8142 1.202188 GCCAAGAATTGTTAGCCGAGC 60.202 52.381 0.00 0.00 46.99 5.03
3834 8143 1.401905 CCAAGAATTGTTAGCCGAGCC 59.598 52.381 0.00 0.00 46.99 4.70
3835 8144 1.062587 CAAGAATTGTTAGCCGAGCCG 59.937 52.381 0.00 0.00 42.34 5.52
3836 8145 0.249398 AGAATTGTTAGCCGAGCCGT 59.751 50.000 0.00 0.00 0.00 5.68
3837 8146 0.373716 GAATTGTTAGCCGAGCCGTG 59.626 55.000 0.00 0.00 0.00 4.94
3838 8147 1.024579 AATTGTTAGCCGAGCCGTGG 61.025 55.000 0.00 0.00 0.00 4.94
3839 8148 2.869503 ATTGTTAGCCGAGCCGTGGG 62.870 60.000 0.00 0.00 0.00 4.61
3896 8206 6.684555 CGCTTTATTACTCAAGAATGTTCTGC 59.315 38.462 0.00 0.00 37.65 4.26
3928 8238 3.360867 TCAAGTTTGGAGGTTGAAGCAA 58.639 40.909 0.00 0.00 0.00 3.91
3998 8308 5.346281 GCTATGTGCCTCGATATTTGTAGTC 59.654 44.000 0.00 0.00 35.15 2.59
4003 8313 4.891168 TGCCTCGATATTTGTAGTCCTACA 59.109 41.667 3.06 3.06 43.61 2.74
4041 8352 5.869753 ACAAGATTGAAATTCAGACTCCG 57.130 39.130 0.00 0.00 0.00 4.63
4077 8388 3.304190 CCGGATGATATGTGCATGTGTTG 60.304 47.826 0.00 0.00 0.00 3.33
4090 8401 1.412079 TGTGTTGCTCCATTGCCTTT 58.588 45.000 0.00 0.00 0.00 3.11
4105 8416 8.006564 TCCATTGCCTTTAGAAATATTGGAGAT 58.993 33.333 0.00 0.00 0.00 2.75
4138 8449 1.107945 TCCGATGCGACCATCACTTA 58.892 50.000 4.76 0.00 46.59 2.24
4140 8451 2.888414 TCCGATGCGACCATCACTTATA 59.112 45.455 4.76 0.00 46.59 0.98
4143 8454 4.327357 CCGATGCGACCATCACTTATATTC 59.673 45.833 4.76 0.00 46.59 1.75
4165 8476 0.824109 ATGAGATCGGTCGCCAAAGA 59.176 50.000 0.00 0.00 0.00 2.52
4249 8560 1.372087 GCTGAAGCTCCCATGAACGG 61.372 60.000 0.00 0.00 38.21 4.44
4301 8612 2.170397 TGATCCTCGCCTTGCTGATTTA 59.830 45.455 0.00 0.00 0.00 1.40
4374 8685 0.387239 GCGCTGGTTCATTGTTGGAC 60.387 55.000 0.00 0.00 0.00 4.02
4421 8732 2.487762 CCTCGAGGCTGATATCTCTGAC 59.512 54.545 20.67 0.00 0.00 3.51
4445 8756 4.370364 AAAACGATCAACAAAGCAGTGT 57.630 36.364 0.00 0.00 0.00 3.55
4503 8815 3.423154 CCCTCGAGCGTGCCAAAC 61.423 66.667 6.99 0.00 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.487711 CCCTTGTCTCAGTCGATTACTCG 60.488 52.174 0.00 0.00 46.41 4.18
26 27 1.198713 ATGCCCTTGTCTCAGTCGAT 58.801 50.000 0.00 0.00 0.00 3.59
30 31 1.067295 TGGAATGCCCTTGTCTCAGT 58.933 50.000 0.00 0.00 35.38 3.41
40 41 3.316308 GTGAGAATGTGTATGGAATGCCC 59.684 47.826 0.00 0.00 0.00 5.36
51 52 2.864097 GCTGTCACGAGTGAGAATGTGT 60.864 50.000 6.13 0.00 40.75 3.72
56 57 1.285950 CGGCTGTCACGAGTGAGAA 59.714 57.895 6.13 0.00 40.75 2.87
57 58 1.853114 GACGGCTGTCACGAGTGAGA 61.853 60.000 21.02 4.50 44.82 3.27
58 59 1.442857 GACGGCTGTCACGAGTGAG 60.443 63.158 21.02 0.00 44.82 3.51
68 84 2.743718 CAGACAAGGGACGGCTGT 59.256 61.111 0.00 0.00 0.00 4.40
75 91 1.468506 TACACGCAGCAGACAAGGGA 61.469 55.000 0.00 0.00 0.00 4.20
76 92 0.602638 TTACACGCAGCAGACAAGGG 60.603 55.000 0.00 0.00 0.00 3.95
86 105 1.655484 TGATGGCATCTTACACGCAG 58.345 50.000 26.49 0.00 0.00 5.18
88 107 1.942657 ACATGATGGCATCTTACACGC 59.057 47.619 26.49 0.28 30.68 5.34
111 130 3.612479 GCACAAATCTGCCTTGGTGTTAG 60.612 47.826 0.00 0.00 0.00 2.34
141 160 1.273048 GTGCCAATTTGAGTGCATGGA 59.727 47.619 4.42 0.00 35.96 3.41
151 170 6.964908 TGACGTATATAATGGTGCCAATTTG 58.035 36.000 0.00 0.00 0.00 2.32
152 171 7.759489 ATGACGTATATAATGGTGCCAATTT 57.241 32.000 0.00 0.00 0.00 1.82
169 188 7.014905 AGCAGGATAGGTTTATACAATGACGTA 59.985 37.037 0.00 0.00 0.00 3.57
284 304 1.486439 GGTGCACATTGGTCAAAACG 58.514 50.000 20.43 0.00 0.00 3.60
305 325 2.535166 CGGTCACACAACTTGCATTTTG 59.465 45.455 6.31 6.31 0.00 2.44
337 357 6.620733 GCGATTTTAGTCACACTACTTGCAAT 60.621 38.462 0.00 0.00 28.93 3.56
388 408 4.299586 TGTCATGAGTAAATGGCCTTGA 57.700 40.909 3.32 0.00 30.84 3.02
427 447 5.878627 TGGCTAGAGTAATACTCCTAGGAC 58.121 45.833 16.12 7.43 46.18 3.85
453 476 5.601729 AGGTAGTAACAATCTAACTAGGCCC 59.398 44.000 0.00 0.00 34.21 5.80
466 489 1.340088 TGGCACGGAGGTAGTAACAA 58.660 50.000 0.00 0.00 0.00 2.83
470 493 5.507817 CGTATATTTTGGCACGGAGGTAGTA 60.508 44.000 0.00 0.00 0.00 1.82
471 494 3.926058 ATATTTTGGCACGGAGGTAGT 57.074 42.857 0.00 0.00 0.00 2.73
472 495 3.739300 CGTATATTTTGGCACGGAGGTAG 59.261 47.826 0.00 0.00 0.00 3.18
473 496 3.384146 TCGTATATTTTGGCACGGAGGTA 59.616 43.478 0.00 0.00 35.21 3.08
474 497 2.168936 TCGTATATTTTGGCACGGAGGT 59.831 45.455 0.00 0.00 35.21 3.85
475 498 2.542595 GTCGTATATTTTGGCACGGAGG 59.457 50.000 0.00 0.00 35.21 4.30
476 499 2.217847 CGTCGTATATTTTGGCACGGAG 59.782 50.000 0.00 0.00 35.21 4.63
477 500 2.195096 CGTCGTATATTTTGGCACGGA 58.805 47.619 0.00 0.00 35.21 4.69
478 501 1.928503 ACGTCGTATATTTTGGCACGG 59.071 47.619 0.00 0.00 35.21 4.94
479 502 3.644805 AACGTCGTATATTTTGGCACG 57.355 42.857 0.00 0.00 35.78 5.34
480 503 5.442260 GCAAAAACGTCGTATATTTTGGCAC 60.442 40.000 24.36 11.89 40.49 5.01
481 504 4.617645 GCAAAAACGTCGTATATTTTGGCA 59.382 37.500 24.36 0.00 40.49 4.92
482 505 4.617645 TGCAAAAACGTCGTATATTTTGGC 59.382 37.500 24.36 18.44 40.95 4.52
527 550 7.605691 GCATCTTACATGATGGAGTATAAAGCT 59.394 37.037 0.00 0.00 42.82 3.74
536 559 4.648651 TGATGGCATCTTACATGATGGAG 58.351 43.478 26.49 0.00 42.82 3.86
538 561 4.765339 ACATGATGGCATCTTACATGATGG 59.235 41.667 26.49 9.62 41.17 3.51
540 563 8.645814 ATTAACATGATGGCATCTTACATGAT 57.354 30.769 26.49 18.36 40.13 2.45
541 564 8.467963 AATTAACATGATGGCATCTTACATGA 57.532 30.769 26.49 6.46 40.13 3.07
615 651 6.563222 TTAAAATGGCGTATATAAGGTGGC 57.437 37.500 0.00 0.00 0.00 5.01
616 652 8.161699 ACTTTAAAATGGCGTATATAAGGTGG 57.838 34.615 0.00 0.00 0.00 4.61
633 669 5.807909 ACAGCCGGATAGGTTACTTTAAAA 58.192 37.500 5.05 0.00 43.70 1.52
635 671 4.141869 GGACAGCCGGATAGGTTACTTTAA 60.142 45.833 5.05 0.00 43.70 1.52
640 676 1.117150 TGGACAGCCGGATAGGTTAC 58.883 55.000 5.05 0.00 43.70 2.50
641 677 2.097110 ATGGACAGCCGGATAGGTTA 57.903 50.000 5.05 0.00 43.70 2.85
732 769 2.236223 TAGCTGCTCTGCCTCTGCAC 62.236 60.000 4.91 0.00 44.23 4.57
746 798 7.266946 GAGATTGCATTTGGCTAGCTAGCTG 62.267 48.000 37.42 29.40 43.83 4.24
747 799 5.280940 GAGATTGCATTTGGCTAGCTAGCT 61.281 45.833 37.42 23.12 43.83 3.32
748 800 2.883386 AGATTGCATTTGGCTAGCTAGC 59.117 45.455 33.40 33.40 42.06 3.42
749 801 3.186001 CGAGATTGCATTTGGCTAGCTAG 59.814 47.826 16.84 16.84 43.83 3.42
750 802 3.133691 CGAGATTGCATTTGGCTAGCTA 58.866 45.455 15.72 5.44 43.83 3.32
767 819 2.596452 CTTTCGCTCTTAGCAACGAGA 58.404 47.619 0.00 0.00 42.58 4.04
773 825 0.108804 CGTCCCTTTCGCTCTTAGCA 60.109 55.000 0.00 0.00 42.58 3.49
817 869 0.749649 CGACCTTCCTCTGCAGCTAT 59.250 55.000 9.47 0.00 0.00 2.97
843 931 3.456380 ACATACCTTGGTGGCTTGATT 57.544 42.857 2.03 0.00 40.22 2.57
871 969 6.342111 AGAGTTTAATCGAGATGAAAGGGTC 58.658 40.000 0.00 0.00 0.00 4.46
879 977 6.983307 AGATGGTTGAGAGTTTAATCGAGATG 59.017 38.462 0.00 0.00 0.00 2.90
892 993 8.353684 ACGTACAATATCTAAGATGGTTGAGAG 58.646 37.037 0.00 0.00 0.00 3.20
909 1010 3.671008 AGAAGCACCACACGTACAATA 57.329 42.857 0.00 0.00 0.00 1.90
911 1012 2.159014 AGAAGAAGCACCACACGTACAA 60.159 45.455 0.00 0.00 0.00 2.41
949 1050 0.109153 ACAGACAGGAGCATGCACAA 59.891 50.000 21.98 0.00 0.00 3.33
994 1096 1.112113 TCTACAGCTTCCATCGTCCC 58.888 55.000 0.00 0.00 0.00 4.46
1126 1261 0.179037 CCACCAGATGCCACGATGAT 60.179 55.000 0.00 0.00 0.00 2.45
1181 1390 0.940126 AGTTGTTCACTGCTCAAGCG 59.060 50.000 0.00 0.00 45.83 4.68
1409 1701 2.510691 GTCACCACCCCATACGCG 60.511 66.667 3.53 3.53 0.00 6.01
1411 1792 2.185867 CCGTCACCACCCCATACG 59.814 66.667 0.00 0.00 0.00 3.06
1664 2098 4.408821 CCGTAGCCCAGCAGCCAA 62.409 66.667 0.00 0.00 0.00 4.52
1669 2103 4.175337 GGATGCCGTAGCCCAGCA 62.175 66.667 0.00 0.00 38.69 4.41
1969 2970 1.813513 AGAAGAACGATGCAAGTGGG 58.186 50.000 0.00 0.00 0.00 4.61
1985 2986 6.550108 AGACTAGTACACTGGACAGAAAAGAA 59.450 38.462 6.29 0.00 0.00 2.52
1999 3000 7.371936 ACTTGACTTGATTGAGACTAGTACAC 58.628 38.462 0.00 0.00 29.61 2.90
2004 3005 7.359598 CGGAAAACTTGACTTGATTGAGACTAG 60.360 40.741 0.00 0.00 0.00 2.57
2012 3013 3.827722 TCCCGGAAAACTTGACTTGATT 58.172 40.909 0.73 0.00 0.00 2.57
2020 3021 4.911514 TCTTCTTTTCCCGGAAAACTTG 57.088 40.909 19.53 11.54 36.73 3.16
2105 3318 4.314440 TCTGGTCCAGGCACGCAC 62.314 66.667 19.11 0.00 31.51 5.34
2106 3319 4.314440 GTCTGGTCCAGGCACGCA 62.314 66.667 19.00 0.00 35.96 5.24
2108 3321 2.543687 CTACGTCTGGTCCAGGCACG 62.544 65.000 24.31 24.31 35.60 5.34
2138 3373 7.906611 TGACGAAAATGAAAAGTTACACATG 57.093 32.000 0.00 0.00 0.00 3.21
2209 4898 0.824109 CGGCCCAGACAAGATACAGA 59.176 55.000 0.00 0.00 0.00 3.41
2210 4899 0.179073 CCGGCCCAGACAAGATACAG 60.179 60.000 0.00 0.00 0.00 2.74
2288 4977 3.359733 CACTACGTAGCGTGCACG 58.640 61.111 34.01 34.01 41.39 5.34
2292 4981 0.170561 AAGGAGCACTACGTAGCGTG 59.829 55.000 22.40 15.56 41.39 5.34
2293 4982 0.450983 GAAGGAGCACTACGTAGCGT 59.549 55.000 22.40 7.07 44.35 5.07
2294 4983 0.248539 GGAAGGAGCACTACGTAGCG 60.249 60.000 22.40 14.40 35.48 4.26
2295 4984 0.815734 TGGAAGGAGCACTACGTAGC 59.184 55.000 22.40 10.59 0.00 3.58
2296 4985 3.802948 AATGGAAGGAGCACTACGTAG 57.197 47.619 20.97 20.97 0.00 3.51
2298 4987 2.615493 CCAAATGGAAGGAGCACTACGT 60.615 50.000 0.00 0.00 37.39 3.57
2299 4988 2.009774 CCAAATGGAAGGAGCACTACG 58.990 52.381 0.00 0.00 37.39 3.51
2300 4989 3.350219 TCCAAATGGAAGGAGCACTAC 57.650 47.619 0.00 0.00 42.18 2.73
2310 4999 8.646004 TTTGATGACAAGTATTTCCAAATGGAA 58.354 29.630 10.80 10.80 43.25 3.53
2311 5000 7.773489 TTGATGACAAGTATTTCCAAATGGA 57.227 32.000 0.00 0.00 43.73 3.41
2362 5657 9.288124 CGCAAATACTTGTCATCAAAATGAATA 57.712 29.630 0.00 0.00 43.42 1.75
2364 5659 6.585702 CCGCAAATACTTGTCATCAAAATGAA 59.414 34.615 0.00 0.00 43.42 2.57
2366 5661 6.033831 GTCCGCAAATACTTGTCATCAAAATG 59.966 38.462 0.00 0.00 34.79 2.32
2371 5666 2.670905 CGTCCGCAAATACTTGTCATCA 59.329 45.455 0.00 0.00 34.79 3.07
2372 5667 2.030457 CCGTCCGCAAATACTTGTCATC 59.970 50.000 0.00 0.00 34.79 2.92
2373 5668 2.006888 CCGTCCGCAAATACTTGTCAT 58.993 47.619 0.00 0.00 34.79 3.06
2376 5671 1.674817 CCTCCGTCCGCAAATACTTGT 60.675 52.381 0.00 0.00 34.79 3.16
2383 5792 1.607178 TACTCCCTCCGTCCGCAAA 60.607 57.895 0.00 0.00 0.00 3.68
2385 5794 2.753043 GTACTCCCTCCGTCCGCA 60.753 66.667 0.00 0.00 0.00 5.69
2387 5796 1.986575 GAACGTACTCCCTCCGTCCG 61.987 65.000 0.00 0.00 32.95 4.79
2390 5799 0.890996 AACGAACGTACTCCCTCCGT 60.891 55.000 0.00 0.00 36.17 4.69
2391 5800 0.179179 GAACGAACGTACTCCCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
2393 5802 0.883833 TGGAACGAACGTACTCCCTC 59.116 55.000 13.20 1.92 0.00 4.30
2394 5803 1.553706 ATGGAACGAACGTACTCCCT 58.446 50.000 13.20 3.69 0.00 4.20
2395 5804 2.375173 AATGGAACGAACGTACTCCC 57.625 50.000 13.20 7.83 0.00 4.30
2430 5839 5.052481 GCTTCTTTTCTTTCCAAGTGCAAT 58.948 37.500 0.00 0.00 0.00 3.56
2432 5841 3.701040 AGCTTCTTTTCTTTCCAAGTGCA 59.299 39.130 0.00 0.00 0.00 4.57
2433 5842 4.313277 AGCTTCTTTTCTTTCCAAGTGC 57.687 40.909 0.00 0.00 0.00 4.40
2434 5843 5.654497 ACAAGCTTCTTTTCTTTCCAAGTG 58.346 37.500 0.00 0.00 0.00 3.16
2435 5844 5.449177 CGACAAGCTTCTTTTCTTTCCAAGT 60.449 40.000 0.00 0.00 0.00 3.16
2436 5845 4.972440 CGACAAGCTTCTTTTCTTTCCAAG 59.028 41.667 0.00 0.00 0.00 3.61
2460 6029 1.841663 AAACGGAGTGTGCGTGCATC 61.842 55.000 0.00 0.00 45.62 3.91
2469 6038 4.023193 GGAAAATGATGTGAAACGGAGTGT 60.023 41.667 0.00 0.00 45.00 3.55
2508 6077 1.156736 CGTCCTGATTGAACCACCAC 58.843 55.000 0.00 0.00 0.00 4.16
2518 6087 1.271871 TGTGGAAATGGCGTCCTGATT 60.272 47.619 3.70 0.00 36.03 2.57
2640 6934 1.078497 TCACATGGGATGCACCGAC 60.078 57.895 0.00 0.00 40.11 4.79
2641 6935 1.221566 CTCACATGGGATGCACCGA 59.778 57.895 0.00 0.00 40.11 4.69
2642 6936 0.177836 TACTCACATGGGATGCACCG 59.822 55.000 0.00 0.00 40.11 4.94
2643 6937 2.418368 TTACTCACATGGGATGCACC 57.582 50.000 0.00 0.00 38.08 5.01
2644 6938 4.989279 AATTTACTCACATGGGATGCAC 57.011 40.909 0.00 0.00 0.00 4.57
2707 7012 3.423154 CGCCGCCTTGTCCAAGAC 61.423 66.667 8.59 0.00 40.79 3.01
2910 7215 4.299547 ACGCTGAAGCTGCCGACA 62.300 61.111 0.00 0.00 39.32 4.35
3423 7731 2.118732 TAGTCCAGGTGGCCGTCA 59.881 61.111 0.00 0.00 34.44 4.35
3538 7846 2.681848 CGTTACGGTACAGTGATCTCCT 59.318 50.000 9.06 0.00 0.00 3.69
3561 7870 4.217550 TCAGGTTTCCGTTTCCAATTCATC 59.782 41.667 0.00 0.00 0.00 2.92
3562 7871 4.022329 GTCAGGTTTCCGTTTCCAATTCAT 60.022 41.667 0.00 0.00 0.00 2.57
3563 7872 3.316868 GTCAGGTTTCCGTTTCCAATTCA 59.683 43.478 0.00 0.00 0.00 2.57
3564 7873 3.608474 CGTCAGGTTTCCGTTTCCAATTC 60.608 47.826 0.00 0.00 0.00 2.17
3565 7874 2.292292 CGTCAGGTTTCCGTTTCCAATT 59.708 45.455 0.00 0.00 0.00 2.32
3566 7875 1.877443 CGTCAGGTTTCCGTTTCCAAT 59.123 47.619 0.00 0.00 0.00 3.16
3567 7876 1.301423 CGTCAGGTTTCCGTTTCCAA 58.699 50.000 0.00 0.00 0.00 3.53
3568 7877 0.178533 ACGTCAGGTTTCCGTTTCCA 59.821 50.000 0.00 0.00 0.00 3.53
3569 7878 0.863799 GACGTCAGGTTTCCGTTTCC 59.136 55.000 11.55 0.00 34.51 3.13
3570 7879 0.863799 GGACGTCAGGTTTCCGTTTC 59.136 55.000 18.91 0.00 34.51 2.78
3571 7880 0.466963 AGGACGTCAGGTTTCCGTTT 59.533 50.000 18.91 0.00 34.51 3.60
3572 7881 1.331214 TAGGACGTCAGGTTTCCGTT 58.669 50.000 18.91 0.00 34.51 4.44
3573 7882 1.475682 GATAGGACGTCAGGTTTCCGT 59.524 52.381 18.91 0.00 37.56 4.69
3574 7883 1.202382 GGATAGGACGTCAGGTTTCCG 60.202 57.143 18.91 0.00 34.31 4.30
3575 7884 2.108970 AGGATAGGACGTCAGGTTTCC 58.891 52.381 18.91 14.64 0.00 3.13
3576 7885 3.447944 AGAAGGATAGGACGTCAGGTTTC 59.552 47.826 18.91 12.20 0.00 2.78
3577 7886 3.195825 CAGAAGGATAGGACGTCAGGTTT 59.804 47.826 18.91 3.52 0.00 3.27
3578 7887 2.761208 CAGAAGGATAGGACGTCAGGTT 59.239 50.000 18.91 2.13 0.00 3.50
3579 7888 2.379972 CAGAAGGATAGGACGTCAGGT 58.620 52.381 18.91 3.62 0.00 4.00
3580 7889 1.683917 CCAGAAGGATAGGACGTCAGG 59.316 57.143 18.91 0.00 36.89 3.86
3581 7890 2.379972 ACCAGAAGGATAGGACGTCAG 58.620 52.381 18.91 0.00 38.69 3.51
3582 7891 2.526888 ACCAGAAGGATAGGACGTCA 57.473 50.000 18.91 0.00 38.69 4.35
3583 7892 3.243468 GCTTACCAGAAGGATAGGACGTC 60.243 52.174 7.13 7.13 38.69 4.34
3584 7893 2.694109 GCTTACCAGAAGGATAGGACGT 59.306 50.000 0.00 0.00 38.69 4.34
3585 7894 2.693591 TGCTTACCAGAAGGATAGGACG 59.306 50.000 0.00 0.00 38.69 4.79
3586 7895 4.965200 ATGCTTACCAGAAGGATAGGAC 57.035 45.455 0.00 0.00 38.69 3.85
3589 7898 6.672266 TTCCTATGCTTACCAGAAGGATAG 57.328 41.667 15.19 15.19 43.78 2.08
3590 7899 6.464465 GCTTTCCTATGCTTACCAGAAGGATA 60.464 42.308 0.00 0.00 38.59 2.59
3591 7900 5.688766 GCTTTCCTATGCTTACCAGAAGGAT 60.689 44.000 0.00 0.00 38.59 3.24
3592 7901 4.384208 GCTTTCCTATGCTTACCAGAAGGA 60.384 45.833 0.00 0.00 37.62 3.36
3593 7902 3.879892 GCTTTCCTATGCTTACCAGAAGG 59.120 47.826 0.00 0.00 42.21 3.46
3594 7903 4.517285 TGCTTTCCTATGCTTACCAGAAG 58.483 43.478 0.00 0.00 0.00 2.85
3595 7904 4.568072 TGCTTTCCTATGCTTACCAGAA 57.432 40.909 0.00 0.00 0.00 3.02
3596 7905 4.778213 ATGCTTTCCTATGCTTACCAGA 57.222 40.909 0.00 0.00 0.00 3.86
3597 7906 4.453819 GCTATGCTTTCCTATGCTTACCAG 59.546 45.833 0.00 0.00 0.00 4.00
3598 7907 4.141505 TGCTATGCTTTCCTATGCTTACCA 60.142 41.667 0.00 0.00 0.00 3.25
3599 7908 4.214332 GTGCTATGCTTTCCTATGCTTACC 59.786 45.833 0.00 0.00 0.00 2.85
3600 7909 4.084328 CGTGCTATGCTTTCCTATGCTTAC 60.084 45.833 0.00 0.00 0.00 2.34
3601 7910 4.058124 CGTGCTATGCTTTCCTATGCTTA 58.942 43.478 0.00 0.00 0.00 3.09
3602 7911 2.874701 CGTGCTATGCTTTCCTATGCTT 59.125 45.455 0.00 0.00 0.00 3.91
3603 7912 2.487934 CGTGCTATGCTTTCCTATGCT 58.512 47.619 0.00 0.00 0.00 3.79
3604 7913 1.532868 CCGTGCTATGCTTTCCTATGC 59.467 52.381 0.00 0.00 0.00 3.14
3605 7914 2.545526 CACCGTGCTATGCTTTCCTATG 59.454 50.000 0.00 0.00 0.00 2.23
3606 7915 2.485479 CCACCGTGCTATGCTTTCCTAT 60.485 50.000 0.00 0.00 0.00 2.57
3607 7916 1.134521 CCACCGTGCTATGCTTTCCTA 60.135 52.381 0.00 0.00 0.00 2.94
3608 7917 0.392998 CCACCGTGCTATGCTTTCCT 60.393 55.000 0.00 0.00 0.00 3.36
3609 7918 0.676782 ACCACCGTGCTATGCTTTCC 60.677 55.000 0.00 0.00 0.00 3.13
3610 7919 2.018542 TACCACCGTGCTATGCTTTC 57.981 50.000 0.00 0.00 0.00 2.62
3611 7920 2.710096 ATACCACCGTGCTATGCTTT 57.290 45.000 0.00 0.00 0.00 3.51
3612 7921 2.224209 GGTATACCACCGTGCTATGCTT 60.224 50.000 17.44 0.00 37.63 3.91
3613 7922 1.343465 GGTATACCACCGTGCTATGCT 59.657 52.381 17.44 0.00 37.63 3.79
3614 7923 1.792006 GGTATACCACCGTGCTATGC 58.208 55.000 17.44 0.00 37.63 3.14
3632 7941 2.093447 CCAGAGCAAGGTTACCAGTAGG 60.093 54.545 3.51 0.00 42.21 3.18
3633 7942 2.832129 TCCAGAGCAAGGTTACCAGTAG 59.168 50.000 3.51 0.00 0.00 2.57
3634 7943 2.897350 TCCAGAGCAAGGTTACCAGTA 58.103 47.619 3.51 0.00 0.00 2.74
3635 7944 1.729586 TCCAGAGCAAGGTTACCAGT 58.270 50.000 3.51 0.00 0.00 4.00
3636 7945 2.859165 TTCCAGAGCAAGGTTACCAG 57.141 50.000 3.51 0.00 0.00 4.00
3637 7946 3.586470 TTTTCCAGAGCAAGGTTACCA 57.414 42.857 3.51 0.00 0.00 3.25
3655 7964 1.202879 TCCTGACAGCCACCGATTTTT 60.203 47.619 0.00 0.00 0.00 1.94
3656 7965 0.400213 TCCTGACAGCCACCGATTTT 59.600 50.000 0.00 0.00 0.00 1.82
3657 7966 0.400213 TTCCTGACAGCCACCGATTT 59.600 50.000 0.00 0.00 0.00 2.17
3658 7967 0.036010 CTTCCTGACAGCCACCGATT 60.036 55.000 0.00 0.00 0.00 3.34
3659 7968 1.599047 CTTCCTGACAGCCACCGAT 59.401 57.895 0.00 0.00 0.00 4.18
3660 7969 2.583441 CCTTCCTGACAGCCACCGA 61.583 63.158 0.00 0.00 0.00 4.69
3661 7970 2.046892 CCTTCCTGACAGCCACCG 60.047 66.667 0.00 0.00 0.00 4.94
3662 7971 1.003233 GTCCTTCCTGACAGCCACC 60.003 63.158 0.00 0.00 35.29 4.61
3663 7972 0.398318 AAGTCCTTCCTGACAGCCAC 59.602 55.000 0.00 0.00 37.73 5.01
3664 7973 1.072331 GAAAGTCCTTCCTGACAGCCA 59.928 52.381 0.00 0.00 37.73 4.75
3665 7974 1.072331 TGAAAGTCCTTCCTGACAGCC 59.928 52.381 0.00 0.00 37.73 4.85
3666 7975 2.550180 GTTGAAAGTCCTTCCTGACAGC 59.450 50.000 0.00 0.00 37.73 4.40
3667 7976 4.061596 GAGTTGAAAGTCCTTCCTGACAG 58.938 47.826 0.00 0.00 37.73 3.51
3668 7977 3.711704 AGAGTTGAAAGTCCTTCCTGACA 59.288 43.478 0.00 0.00 37.73 3.58
3669 7978 4.039852 AGAGAGTTGAAAGTCCTTCCTGAC 59.960 45.833 0.00 0.00 32.53 3.51
3670 7979 4.227197 AGAGAGTTGAAAGTCCTTCCTGA 58.773 43.478 0.00 0.00 32.53 3.86
3671 7980 4.615588 AGAGAGTTGAAAGTCCTTCCTG 57.384 45.455 0.00 0.00 32.53 3.86
3672 7981 4.904853 AGAAGAGAGTTGAAAGTCCTTCCT 59.095 41.667 16.90 8.61 36.90 3.36
3673 7982 5.221541 TGAGAAGAGAGTTGAAAGTCCTTCC 60.222 44.000 16.90 12.45 36.90 3.46
3674 7983 5.848406 TGAGAAGAGAGTTGAAAGTCCTTC 58.152 41.667 14.73 14.73 36.71 3.46
3675 7984 5.878406 TGAGAAGAGAGTTGAAAGTCCTT 57.122 39.130 0.00 0.00 0.00 3.36
3676 7985 5.046663 GGATGAGAAGAGAGTTGAAAGTCCT 60.047 44.000 0.00 0.00 0.00 3.85
3677 7986 5.046663 AGGATGAGAAGAGAGTTGAAAGTCC 60.047 44.000 0.00 0.00 0.00 3.85
3678 7987 6.036577 AGGATGAGAAGAGAGTTGAAAGTC 57.963 41.667 0.00 0.00 0.00 3.01
3679 7988 6.723977 AGTAGGATGAGAAGAGAGTTGAAAGT 59.276 38.462 0.00 0.00 0.00 2.66
3680 7989 7.093988 TGAGTAGGATGAGAAGAGAGTTGAAAG 60.094 40.741 0.00 0.00 0.00 2.62
3681 7990 6.721668 TGAGTAGGATGAGAAGAGAGTTGAAA 59.278 38.462 0.00 0.00 0.00 2.69
3682 7991 6.249192 TGAGTAGGATGAGAAGAGAGTTGAA 58.751 40.000 0.00 0.00 0.00 2.69
3683 7992 5.821097 TGAGTAGGATGAGAAGAGAGTTGA 58.179 41.667 0.00 0.00 0.00 3.18
3684 7993 6.506147 CATGAGTAGGATGAGAAGAGAGTTG 58.494 44.000 0.00 0.00 0.00 3.16
3685 7994 5.068987 GCATGAGTAGGATGAGAAGAGAGTT 59.931 44.000 0.00 0.00 0.00 3.01
3686 7995 4.584325 GCATGAGTAGGATGAGAAGAGAGT 59.416 45.833 0.00 0.00 0.00 3.24
3687 7996 4.583907 TGCATGAGTAGGATGAGAAGAGAG 59.416 45.833 0.00 0.00 0.00 3.20
3688 7997 4.540715 TGCATGAGTAGGATGAGAAGAGA 58.459 43.478 0.00 0.00 0.00 3.10
3689 7998 4.933505 TGCATGAGTAGGATGAGAAGAG 57.066 45.455 0.00 0.00 0.00 2.85
3690 7999 5.883685 AATGCATGAGTAGGATGAGAAGA 57.116 39.130 0.00 0.00 0.00 2.87
3691 8000 6.053650 TGAAATGCATGAGTAGGATGAGAAG 58.946 40.000 0.00 0.00 0.00 2.85
3692 8001 5.993055 TGAAATGCATGAGTAGGATGAGAA 58.007 37.500 0.00 0.00 0.00 2.87
3693 8002 5.129980 ACTGAAATGCATGAGTAGGATGAGA 59.870 40.000 0.00 0.00 0.00 3.27
3694 8003 5.236695 CACTGAAATGCATGAGTAGGATGAG 59.763 44.000 0.00 0.00 0.00 2.90
3695 8004 5.121105 CACTGAAATGCATGAGTAGGATGA 58.879 41.667 0.00 0.00 0.00 2.92
3696 8005 4.880120 ACACTGAAATGCATGAGTAGGATG 59.120 41.667 0.00 0.00 0.00 3.51
3697 8006 5.108187 ACACTGAAATGCATGAGTAGGAT 57.892 39.130 0.00 0.00 0.00 3.24
3698 8007 4.558226 ACACTGAAATGCATGAGTAGGA 57.442 40.909 0.00 0.00 0.00 2.94
3699 8008 4.201753 CGAACACTGAAATGCATGAGTAGG 60.202 45.833 0.00 0.00 0.00 3.18
3700 8009 4.627035 TCGAACACTGAAATGCATGAGTAG 59.373 41.667 0.00 0.00 0.00 2.57
3701 8010 4.388773 GTCGAACACTGAAATGCATGAGTA 59.611 41.667 0.00 0.00 0.00 2.59
3702 8011 3.187227 GTCGAACACTGAAATGCATGAGT 59.813 43.478 0.00 0.00 0.00 3.41
3703 8012 3.187022 TGTCGAACACTGAAATGCATGAG 59.813 43.478 0.00 0.00 0.00 2.90
3704 8013 3.137533 TGTCGAACACTGAAATGCATGA 58.862 40.909 0.00 0.00 0.00 3.07
3705 8014 3.541071 TGTCGAACACTGAAATGCATG 57.459 42.857 0.00 0.00 0.00 4.06
3706 8015 4.771590 ATTGTCGAACACTGAAATGCAT 57.228 36.364 0.00 0.00 0.00 3.96
3707 8016 5.878332 ATATTGTCGAACACTGAAATGCA 57.122 34.783 0.00 0.00 0.00 3.96
3708 8017 6.022251 CGAAATATTGTCGAACACTGAAATGC 60.022 38.462 11.99 0.00 41.02 3.56
3709 8018 7.006476 CACGAAATATTGTCGAACACTGAAATG 59.994 37.037 19.76 6.42 41.02 2.32
3710 8019 7.015289 CACGAAATATTGTCGAACACTGAAAT 58.985 34.615 19.76 0.00 41.02 2.17
3711 8020 6.359545 CACGAAATATTGTCGAACACTGAAA 58.640 36.000 19.76 0.00 41.02 2.69
3712 8021 5.107259 CCACGAAATATTGTCGAACACTGAA 60.107 40.000 19.76 0.00 41.02 3.02
3713 8022 4.387559 CCACGAAATATTGTCGAACACTGA 59.612 41.667 19.76 0.00 41.02 3.41
3714 8023 4.387559 TCCACGAAATATTGTCGAACACTG 59.612 41.667 19.76 11.02 41.02 3.66
3715 8024 4.387862 GTCCACGAAATATTGTCGAACACT 59.612 41.667 19.76 2.52 41.02 3.55
3716 8025 4.150980 TGTCCACGAAATATTGTCGAACAC 59.849 41.667 19.76 14.14 41.02 3.32
3717 8026 4.308265 TGTCCACGAAATATTGTCGAACA 58.692 39.130 19.76 16.90 41.02 3.18
3718 8027 4.914312 TGTCCACGAAATATTGTCGAAC 57.086 40.909 19.76 15.43 41.02 3.95
3719 8028 5.639931 TCAATGTCCACGAAATATTGTCGAA 59.360 36.000 19.76 7.92 41.02 3.71
3720 8029 5.172205 TCAATGTCCACGAAATATTGTCGA 58.828 37.500 19.76 0.00 41.02 4.20
3721 8030 5.063438 ACTCAATGTCCACGAAATATTGTCG 59.937 40.000 14.42 14.42 44.10 4.35
3722 8031 6.422776 ACTCAATGTCCACGAAATATTGTC 57.577 37.500 0.00 0.00 32.22 3.18
3723 8032 7.606456 ACTTACTCAATGTCCACGAAATATTGT 59.394 33.333 0.00 0.00 32.22 2.71
3724 8033 7.974675 ACTTACTCAATGTCCACGAAATATTG 58.025 34.615 0.00 0.00 0.00 1.90
3725 8034 8.561738 AACTTACTCAATGTCCACGAAATATT 57.438 30.769 0.00 0.00 0.00 1.28
3726 8035 9.095065 GTAACTTACTCAATGTCCACGAAATAT 57.905 33.333 0.00 0.00 0.00 1.28
3727 8036 7.546667 GGTAACTTACTCAATGTCCACGAAATA 59.453 37.037 0.00 0.00 0.00 1.40
3728 8037 6.370718 GGTAACTTACTCAATGTCCACGAAAT 59.629 38.462 0.00 0.00 0.00 2.17
3729 8038 5.697633 GGTAACTTACTCAATGTCCACGAAA 59.302 40.000 0.00 0.00 0.00 3.46
3730 8039 5.232463 GGTAACTTACTCAATGTCCACGAA 58.768 41.667 0.00 0.00 0.00 3.85
3731 8040 4.616604 CGGTAACTTACTCAATGTCCACGA 60.617 45.833 0.00 0.00 0.00 4.35
3732 8041 3.611113 CGGTAACTTACTCAATGTCCACG 59.389 47.826 0.00 0.00 0.00 4.94
3733 8042 3.930848 CCGGTAACTTACTCAATGTCCAC 59.069 47.826 0.00 0.00 0.00 4.02
3734 8043 3.618019 GCCGGTAACTTACTCAATGTCCA 60.618 47.826 1.90 0.00 0.00 4.02
3735 8044 2.934553 GCCGGTAACTTACTCAATGTCC 59.065 50.000 1.90 0.00 0.00 4.02
3736 8045 2.601763 CGCCGGTAACTTACTCAATGTC 59.398 50.000 1.90 0.00 0.00 3.06
3737 8046 2.231964 TCGCCGGTAACTTACTCAATGT 59.768 45.455 1.90 0.00 0.00 2.71
3738 8047 2.601763 GTCGCCGGTAACTTACTCAATG 59.398 50.000 1.90 0.00 0.00 2.82
3739 8048 2.733227 CGTCGCCGGTAACTTACTCAAT 60.733 50.000 1.90 0.00 0.00 2.57
3740 8049 1.401409 CGTCGCCGGTAACTTACTCAA 60.401 52.381 1.90 0.00 0.00 3.02
3741 8050 0.168788 CGTCGCCGGTAACTTACTCA 59.831 55.000 1.90 0.00 0.00 3.41
3742 8051 0.169009 ACGTCGCCGGTAACTTACTC 59.831 55.000 1.90 0.00 38.78 2.59
3743 8052 0.598065 AACGTCGCCGGTAACTTACT 59.402 50.000 1.90 0.00 38.78 2.24
3744 8053 0.710017 CAACGTCGCCGGTAACTTAC 59.290 55.000 1.90 0.00 38.78 2.34
3745 8054 0.313672 ACAACGTCGCCGGTAACTTA 59.686 50.000 1.90 0.00 38.78 2.24
3746 8055 1.067916 ACAACGTCGCCGGTAACTT 59.932 52.632 1.90 0.00 38.78 2.66
3747 8056 1.662446 CACAACGTCGCCGGTAACT 60.662 57.895 1.90 0.00 38.78 2.24
3748 8057 0.662970 TACACAACGTCGCCGGTAAC 60.663 55.000 1.90 0.03 38.78 2.50
3749 8058 0.387112 CTACACAACGTCGCCGGTAA 60.387 55.000 1.90 0.00 38.78 2.85
3750 8059 1.209898 CTACACAACGTCGCCGGTA 59.790 57.895 1.90 0.00 38.78 4.02
3751 8060 2.049802 CTACACAACGTCGCCGGT 60.050 61.111 1.90 0.00 38.78 5.28
3752 8061 2.049802 ACTACACAACGTCGCCGG 60.050 61.111 0.00 0.00 38.78 6.13
3753 8062 1.370778 TCACTACACAACGTCGCCG 60.371 57.895 0.00 0.00 40.83 6.46
3754 8063 0.595567 TGTCACTACACAACGTCGCC 60.596 55.000 0.00 0.00 0.00 5.54
3755 8064 1.124297 CATGTCACTACACAACGTCGC 59.876 52.381 0.00 0.00 38.78 5.19
3756 8065 2.656897 CTCATGTCACTACACAACGTCG 59.343 50.000 0.00 0.00 38.78 5.12
3757 8066 3.425525 CACTCATGTCACTACACAACGTC 59.574 47.826 0.00 0.00 38.78 4.34
3758 8067 3.381045 CACTCATGTCACTACACAACGT 58.619 45.455 0.00 0.00 38.78 3.99
3759 8068 2.731451 CCACTCATGTCACTACACAACG 59.269 50.000 0.00 0.00 38.78 4.10
3760 8069 2.480419 GCCACTCATGTCACTACACAAC 59.520 50.000 0.00 0.00 38.78 3.32
3761 8070 2.103941 TGCCACTCATGTCACTACACAA 59.896 45.455 0.00 0.00 38.78 3.33
3762 8071 1.691434 TGCCACTCATGTCACTACACA 59.309 47.619 0.00 0.00 38.78 3.72
3763 8072 2.455674 TGCCACTCATGTCACTACAC 57.544 50.000 0.00 0.00 38.78 2.90
3764 8073 3.138304 GTTTGCCACTCATGTCACTACA 58.862 45.455 0.00 0.00 40.69 2.74
3765 8074 3.403038 AGTTTGCCACTCATGTCACTAC 58.597 45.455 0.00 0.00 0.00 2.73
3766 8075 3.769739 AGTTTGCCACTCATGTCACTA 57.230 42.857 0.00 0.00 0.00 2.74
3767 8076 2.645838 AGTTTGCCACTCATGTCACT 57.354 45.000 0.00 0.00 0.00 3.41
3768 8077 3.374745 CAAAGTTTGCCACTCATGTCAC 58.625 45.455 1.96 0.00 32.94 3.67
3769 8078 3.713858 CAAAGTTTGCCACTCATGTCA 57.286 42.857 1.96 0.00 32.94 3.58
3789 8098 2.684843 CCTCTGCCAAGCGAGTTGC 61.685 63.158 0.00 0.00 46.98 4.17
3790 8099 2.684843 GCCTCTGCCAAGCGAGTTG 61.685 63.158 0.00 0.00 35.71 3.16
3791 8100 2.359230 GCCTCTGCCAAGCGAGTT 60.359 61.111 0.00 0.00 31.26 3.01
3807 8116 1.401905 CTAACAATTCTTGGCCTCCGC 59.598 52.381 3.32 0.00 34.12 5.54
3808 8117 1.401905 GCTAACAATTCTTGGCCTCCG 59.598 52.381 3.32 0.00 34.12 4.63
3809 8118 1.751351 GGCTAACAATTCTTGGCCTCC 59.249 52.381 12.62 0.00 42.93 4.30
3810 8119 1.401905 CGGCTAACAATTCTTGGCCTC 59.598 52.381 16.65 0.00 43.81 4.70
3811 8120 1.004277 TCGGCTAACAATTCTTGGCCT 59.996 47.619 16.65 0.00 43.81 5.19
3812 8121 1.401905 CTCGGCTAACAATTCTTGGCC 59.598 52.381 10.27 10.27 42.83 5.36
3813 8122 1.202188 GCTCGGCTAACAATTCTTGGC 60.202 52.381 0.00 0.00 34.12 4.52
3814 8123 1.401905 GGCTCGGCTAACAATTCTTGG 59.598 52.381 0.00 0.00 34.12 3.61
3815 8124 1.062587 CGGCTCGGCTAACAATTCTTG 59.937 52.381 0.00 0.00 0.00 3.02
3816 8125 1.338769 ACGGCTCGGCTAACAATTCTT 60.339 47.619 0.00 0.00 0.00 2.52
3817 8126 0.249398 ACGGCTCGGCTAACAATTCT 59.751 50.000 0.00 0.00 0.00 2.40
3818 8127 0.373716 CACGGCTCGGCTAACAATTC 59.626 55.000 0.00 0.00 0.00 2.17
3819 8128 1.024579 CCACGGCTCGGCTAACAATT 61.025 55.000 0.00 0.00 0.00 2.32
3820 8129 1.449601 CCACGGCTCGGCTAACAAT 60.450 57.895 0.00 0.00 0.00 2.71
3821 8130 2.047655 CCACGGCTCGGCTAACAA 60.048 61.111 0.00 0.00 0.00 2.83
3822 8131 4.077184 CCCACGGCTCGGCTAACA 62.077 66.667 0.00 0.00 0.00 2.41
3832 8141 2.805807 GATCGTAAACGCCCACGGC 61.806 63.158 0.00 0.00 46.75 5.68
3833 8142 0.738412 AAGATCGTAAACGCCCACGG 60.738 55.000 0.00 0.00 46.04 4.94
3835 8144 3.547649 AAAAAGATCGTAAACGCCCAC 57.452 42.857 0.00 0.00 39.60 4.61
3896 8206 4.572389 CCTCCAAACTTGAGATGTATTCCG 59.428 45.833 0.00 0.00 0.00 4.30
3928 8238 2.091541 CTAATGGTCGCCATGTTTGGT 58.908 47.619 11.38 0.00 44.40 3.67
4041 8352 1.672881 CATCCGGGAGATCAAGCAAAC 59.327 52.381 0.00 0.00 30.59 2.93
4077 8388 6.040842 TCCAATATTTCTAAAGGCAATGGAGC 59.959 38.462 0.00 0.00 0.00 4.70
4090 8401 7.716998 GCAAGGAAGTGATCTCCAATATTTCTA 59.283 37.037 2.60 0.00 0.00 2.10
4105 8416 2.358957 CATCGGATTGCAAGGAAGTGA 58.641 47.619 4.94 0.00 0.00 3.41
4138 8449 2.868662 CGACCGATCTCATGCGAATAT 58.131 47.619 0.00 0.00 0.00 1.28
4140 8451 0.941463 GCGACCGATCTCATGCGAAT 60.941 55.000 0.00 0.00 0.00 3.34
4143 8454 3.032609 GGCGACCGATCTCATGCG 61.033 66.667 0.00 0.00 0.00 4.73
4165 8476 1.905354 GCTTGCAGGGAGGCTTTGT 60.905 57.895 0.00 0.00 34.04 2.83
4209 8520 3.763897 GCCATATGTTTTGAGGGTGTCTT 59.236 43.478 1.24 0.00 0.00 3.01
4301 8612 1.372501 AAGTGGATGGGGCTACAACT 58.627 50.000 0.00 0.00 0.00 3.16
4366 8677 1.227823 CAGGTGCGAGGTCCAACAA 60.228 57.895 0.00 0.00 0.00 2.83
4374 8685 1.071471 AACAGAACCAGGTGCGAGG 59.929 57.895 0.00 0.00 0.00 4.63
4421 8732 5.914635 ACACTGCTTTGTTGATCGTTTTATG 59.085 36.000 0.00 0.00 0.00 1.90
4445 8756 2.594303 CAAAGTCCAGCGGGCACA 60.594 61.111 0.00 0.00 0.00 4.57
4503 8815 2.295909 GCTCTAGTCACTCTATGGGCTG 59.704 54.545 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.