Multiple sequence alignment - TraesCS3B01G423300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G423300 chr3B 100.000 5679 0 0 1 5679 660707773 660702095 0.000000e+00 10488.0
1 TraesCS3B01G423300 chr3B 99.759 830 2 0 2920 3749 30386205 30385376 0.000000e+00 1522.0
2 TraesCS3B01G423300 chr3B 99.077 325 3 0 3862 4186 30385279 30384955 8.200000e-163 584.0
3 TraesCS3B01G423300 chr3B 89.583 432 37 4 3766 4191 754961978 754962407 5.000000e-150 542.0
4 TraesCS3B01G423300 chr3B 99.123 114 1 0 5566 5679 8892971 8892858 7.460000e-49 206.0
5 TraesCS3B01G423300 chr3B 95.614 114 5 0 5566 5679 391643486 391643599 3.490000e-42 183.0
6 TraesCS3B01G423300 chr3B 93.860 114 7 0 5566 5679 75478222 75478335 7.560000e-39 172.0
7 TraesCS3B01G423300 chr3A 90.557 2891 191 47 77 2920 639243100 639245955 0.000000e+00 3751.0
8 TraesCS3B01G423300 chr3A 92.868 1304 47 14 2917 4184 672845722 672844429 0.000000e+00 1851.0
9 TraesCS3B01G423300 chr3A 94.605 797 41 2 2920 3715 61433153 61432358 0.000000e+00 1232.0
10 TraesCS3B01G423300 chr3A 93.726 797 48 2 2920 3715 61434168 61433373 0.000000e+00 1194.0
11 TraesCS3B01G423300 chr3A 89.540 956 47 15 4405 5325 639246384 639247321 0.000000e+00 1162.0
12 TraesCS3B01G423300 chr3A 91.743 218 15 3 4194 4410 639245945 639246160 3.330000e-77 300.0
13 TraesCS3B01G423300 chr3A 87.234 141 12 1 5412 5552 639247405 639247539 7.620000e-34 156.0
14 TraesCS3B01G423300 chr3D 92.279 2448 83 39 520 2920 499851572 499849184 0.000000e+00 3376.0
15 TraesCS3B01G423300 chr3D 93.798 1306 29 10 2921 4191 459484141 459482853 0.000000e+00 1916.0
16 TraesCS3B01G423300 chr3D 93.077 1040 48 9 4194 5230 499849194 499848176 0.000000e+00 1500.0
17 TraesCS3B01G423300 chr3D 80.896 335 41 14 5225 5555 499847554 499847239 5.680000e-60 243.0
18 TraesCS3B01G423300 chr3D 86.517 89 7 1 5325 5413 499847374 499847457 6.060000e-15 93.5
19 TraesCS3B01G423300 chr3D 81.739 115 14 6 5566 5679 14953317 14953209 7.840000e-14 89.8
20 TraesCS3B01G423300 chr4A 99.294 1275 8 1 2917 4191 615176860 615178133 0.000000e+00 2303.0
21 TraesCS3B01G423300 chr7A 95.205 1293 26 12 2922 4180 21201967 21200677 0.000000e+00 2012.0
22 TraesCS3B01G423300 chr7A 94.491 1307 34 7 2924 4195 29330482 29329179 0.000000e+00 1980.0
23 TraesCS3B01G423300 chr7A 94.286 35 2 0 375 409 701162079 701162045 3.000000e-03 54.7
24 TraesCS3B01G423300 chr5B 94.325 1304 38 5 2923 4191 273619037 273617735 0.000000e+00 1965.0
25 TraesCS3B01G423300 chr5B 80.702 114 13 9 5565 5673 107904921 107904812 4.720000e-11 80.5
26 TraesCS3B01G423300 chr7B 89.610 1309 88 12 2923 4190 166624900 166626201 0.000000e+00 1620.0
27 TraesCS3B01G423300 chr7B 90.759 303 26 2 3891 4191 701772927 701773229 2.460000e-108 403.0
28 TraesCS3B01G423300 chr7B 99.123 114 1 0 5566 5679 123663536 123663649 7.460000e-49 206.0
29 TraesCS3B01G423300 chrUn 82.564 585 68 12 3389 3940 82070891 82071474 8.550000e-133 484.0
30 TraesCS3B01G423300 chr6B 94.690 113 6 0 5567 5679 100911995 100912107 5.850000e-40 176.0
31 TraesCS3B01G423300 chr6B 87.611 113 12 2 5568 5679 79843785 79843896 4.620000e-26 130.0
32 TraesCS3B01G423300 chr4B 91.228 114 8 2 5566 5679 272675858 272675747 2.740000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G423300 chr3B 660702095 660707773 5678 True 10488.000000 10488 100.000000 1 5679 1 chr3B.!!$R2 5678
1 TraesCS3B01G423300 chr3B 30384955 30386205 1250 True 1053.000000 1522 99.418000 2920 4186 2 chr3B.!!$R3 1266
2 TraesCS3B01G423300 chr3A 672844429 672845722 1293 True 1851.000000 1851 92.868000 2917 4184 1 chr3A.!!$R1 1267
3 TraesCS3B01G423300 chr3A 639243100 639247539 4439 False 1342.250000 3751 89.768500 77 5552 4 chr3A.!!$F1 5475
4 TraesCS3B01G423300 chr3A 61432358 61434168 1810 True 1213.000000 1232 94.165500 2920 3715 2 chr3A.!!$R2 795
5 TraesCS3B01G423300 chr3D 459482853 459484141 1288 True 1916.000000 1916 93.798000 2921 4191 1 chr3D.!!$R2 1270
6 TraesCS3B01G423300 chr3D 499847239 499851572 4333 True 1706.333333 3376 88.750667 520 5555 3 chr3D.!!$R3 5035
7 TraesCS3B01G423300 chr4A 615176860 615178133 1273 False 2303.000000 2303 99.294000 2917 4191 1 chr4A.!!$F1 1274
8 TraesCS3B01G423300 chr7A 21200677 21201967 1290 True 2012.000000 2012 95.205000 2922 4180 1 chr7A.!!$R1 1258
9 TraesCS3B01G423300 chr7A 29329179 29330482 1303 True 1980.000000 1980 94.491000 2924 4195 1 chr7A.!!$R2 1271
10 TraesCS3B01G423300 chr5B 273617735 273619037 1302 True 1965.000000 1965 94.325000 2923 4191 1 chr5B.!!$R2 1268
11 TraesCS3B01G423300 chr7B 166624900 166626201 1301 False 1620.000000 1620 89.610000 2923 4190 1 chr7B.!!$F2 1267
12 TraesCS3B01G423300 chrUn 82070891 82071474 583 False 484.000000 484 82.564000 3389 3940 1 chrUn.!!$F1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 251 0.107993 CGGAGTGCACCATCACATCT 60.108 55.0 14.63 0.0 39.35 2.90 F
973 1026 0.178932 ACTAGTCCACAGCCACAGGA 60.179 55.0 0.00 0.0 0.00 3.86 F
1753 1820 0.321346 TGACACCATGTGCGTCTGAT 59.679 50.0 7.61 0.0 36.98 2.90 F
1891 1958 0.651031 GGAAGCTTTACGCCGATGAC 59.349 55.0 0.00 0.0 40.39 3.06 F
2639 2723 0.737715 ACTCAAGAGACGCATTCGGC 60.738 55.0 3.73 0.0 46.15 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1500 1554 0.832983 ATTTCAGGGCCTGCAGCAAA 60.833 50.000 29.02 22.4 46.50 3.68 R
2676 2760 0.039256 CCACAACTGCCCATCAAACG 60.039 55.000 0.00 0.0 0.00 3.60 R
3349 3433 0.964860 CGTGGTGCAATGGGGATTCA 60.965 55.000 0.00 0.0 0.00 2.57 R
4157 4909 1.001633 GAGACAGGGCGAAACCTAACA 59.998 52.381 0.00 0.0 39.34 2.41 R
4808 5791 0.249911 GGCAAACGGACTGACTGACT 60.250 55.000 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.895636 AAACCGAAAGCACATATTCATCA 57.104 34.783 0.00 0.00 0.00 3.07
26 27 5.490139 AACCGAAAGCACATATTCATCAG 57.510 39.130 0.00 0.00 0.00 2.90
27 28 4.769688 ACCGAAAGCACATATTCATCAGA 58.230 39.130 0.00 0.00 0.00 3.27
28 29 5.371526 ACCGAAAGCACATATTCATCAGAT 58.628 37.500 0.00 0.00 0.00 2.90
29 30 6.524734 ACCGAAAGCACATATTCATCAGATA 58.475 36.000 0.00 0.00 0.00 1.98
30 31 6.425114 ACCGAAAGCACATATTCATCAGATAC 59.575 38.462 0.00 0.00 0.00 2.24
31 32 6.128445 CCGAAAGCACATATTCATCAGATACC 60.128 42.308 0.00 0.00 0.00 2.73
32 33 6.648310 CGAAAGCACATATTCATCAGATACCT 59.352 38.462 0.00 0.00 0.00 3.08
33 34 7.814587 CGAAAGCACATATTCATCAGATACCTA 59.185 37.037 0.00 0.00 0.00 3.08
34 35 9.494271 GAAAGCACATATTCATCAGATACCTAA 57.506 33.333 0.00 0.00 0.00 2.69
35 36 9.851686 AAAGCACATATTCATCAGATACCTAAA 57.148 29.630 0.00 0.00 0.00 1.85
36 37 9.851686 AAGCACATATTCATCAGATACCTAAAA 57.148 29.630 0.00 0.00 0.00 1.52
37 38 9.277783 AGCACATATTCATCAGATACCTAAAAC 57.722 33.333 0.00 0.00 0.00 2.43
38 39 8.223769 GCACATATTCATCAGATACCTAAAACG 58.776 37.037 0.00 0.00 0.00 3.60
39 40 8.712363 CACATATTCATCAGATACCTAAAACGG 58.288 37.037 0.00 0.00 0.00 4.44
40 41 8.429641 ACATATTCATCAGATACCTAAAACGGT 58.570 33.333 0.00 0.00 41.10 4.83
41 42 9.273016 CATATTCATCAGATACCTAAAACGGTT 57.727 33.333 0.00 0.00 38.49 4.44
42 43 9.847224 ATATTCATCAGATACCTAAAACGGTTT 57.153 29.630 2.90 2.90 38.49 3.27
43 44 7.989416 TTCATCAGATACCTAAAACGGTTTT 57.011 32.000 21.20 21.20 38.49 2.43
44 45 7.372451 TCATCAGATACCTAAAACGGTTTTG 57.628 36.000 24.93 13.86 38.49 2.44
45 46 5.616488 TCAGATACCTAAAACGGTTTTGC 57.384 39.130 24.93 9.85 38.49 3.68
46 47 4.456566 TCAGATACCTAAAACGGTTTTGCC 59.543 41.667 24.93 9.94 38.49 4.52
47 48 4.216687 CAGATACCTAAAACGGTTTTGCCA 59.783 41.667 24.93 7.90 38.49 4.92
48 49 2.875087 ACCTAAAACGGTTTTGCCAC 57.125 45.000 24.93 0.00 36.97 5.01
49 50 1.409790 ACCTAAAACGGTTTTGCCACC 59.590 47.619 24.93 0.00 36.97 4.61
55 56 3.527641 GGTTTTGCCACCGGTTGA 58.472 55.556 10.41 0.00 37.17 3.18
56 57 1.817209 GGTTTTGCCACCGGTTGAA 59.183 52.632 10.41 0.00 37.17 2.69
57 58 0.175989 GGTTTTGCCACCGGTTGAAA 59.824 50.000 10.41 1.52 37.17 2.69
58 59 1.405661 GGTTTTGCCACCGGTTGAAAA 60.406 47.619 10.41 8.98 37.17 2.29
59 60 2.556257 GTTTTGCCACCGGTTGAAAAT 58.444 42.857 12.43 0.00 0.00 1.82
60 61 3.492829 GGTTTTGCCACCGGTTGAAAATA 60.493 43.478 12.43 2.02 37.17 1.40
61 62 4.311606 GTTTTGCCACCGGTTGAAAATAT 58.688 39.130 12.43 0.00 0.00 1.28
62 63 3.584406 TTGCCACCGGTTGAAAATATG 57.416 42.857 10.41 0.00 0.00 1.78
63 64 1.821753 TGCCACCGGTTGAAAATATGG 59.178 47.619 10.41 3.53 0.00 2.74
64 65 2.096248 GCCACCGGTTGAAAATATGGA 58.904 47.619 10.41 0.00 0.00 3.41
65 66 2.099098 GCCACCGGTTGAAAATATGGAG 59.901 50.000 10.41 0.00 0.00 3.86
66 67 2.099098 CCACCGGTTGAAAATATGGAGC 59.901 50.000 2.97 0.00 0.00 4.70
67 68 2.014128 ACCGGTTGAAAATATGGAGCG 58.986 47.619 0.00 0.00 0.00 5.03
68 69 2.014128 CCGGTTGAAAATATGGAGCGT 58.986 47.619 0.00 0.00 0.00 5.07
69 70 2.031683 CCGGTTGAAAATATGGAGCGTC 59.968 50.000 0.00 0.00 0.00 5.19
70 71 2.285602 CGGTTGAAAATATGGAGCGTCG 60.286 50.000 0.00 0.00 0.00 5.12
71 72 2.031683 GGTTGAAAATATGGAGCGTCGG 59.968 50.000 0.00 0.00 0.00 4.79
72 73 2.933906 GTTGAAAATATGGAGCGTCGGA 59.066 45.455 0.00 0.00 0.00 4.55
73 74 3.469008 TGAAAATATGGAGCGTCGGAT 57.531 42.857 0.00 0.00 0.00 4.18
74 75 3.390135 TGAAAATATGGAGCGTCGGATC 58.610 45.455 0.00 0.00 0.00 3.36
75 76 3.181470 TGAAAATATGGAGCGTCGGATCA 60.181 43.478 0.00 0.00 0.00 2.92
96 97 1.063642 TCATCCAACAACCACCAACCA 60.064 47.619 0.00 0.00 0.00 3.67
102 103 2.863137 CAACAACCACCAACCAAAATCG 59.137 45.455 0.00 0.00 0.00 3.34
105 106 1.337118 ACCACCAACCAAAATCGCAT 58.663 45.000 0.00 0.00 0.00 4.73
119 120 6.366877 CCAAAATCGCATTGTTCATCTTCTTT 59.633 34.615 0.00 0.00 0.00 2.52
124 125 3.511146 GCATTGTTCATCTTCTTTCCCCA 59.489 43.478 0.00 0.00 0.00 4.96
125 126 4.161001 GCATTGTTCATCTTCTTTCCCCAT 59.839 41.667 0.00 0.00 0.00 4.00
126 127 5.657474 CATTGTTCATCTTCTTTCCCCATG 58.343 41.667 0.00 0.00 0.00 3.66
128 129 4.739793 TGTTCATCTTCTTTCCCCATGTT 58.260 39.130 0.00 0.00 0.00 2.71
129 130 4.766891 TGTTCATCTTCTTTCCCCATGTTC 59.233 41.667 0.00 0.00 0.00 3.18
130 131 4.934797 TCATCTTCTTTCCCCATGTTCT 57.065 40.909 0.00 0.00 0.00 3.01
140 141 1.373570 CCCATGTTCTTCTTCCTCGC 58.626 55.000 0.00 0.00 0.00 5.03
160 161 4.323477 CGTCGCCCTCCAACCCAA 62.323 66.667 0.00 0.00 0.00 4.12
170 171 1.974875 CCAACCCAACCCTAACCGC 60.975 63.158 0.00 0.00 0.00 5.68
172 173 2.462626 AACCCAACCCTAACCGCCA 61.463 57.895 0.00 0.00 0.00 5.69
173 174 2.009208 AACCCAACCCTAACCGCCAA 62.009 55.000 0.00 0.00 0.00 4.52
176 179 1.074248 CAACCCTAACCGCCAACCT 59.926 57.895 0.00 0.00 0.00 3.50
182 185 3.876255 TAACCGCCAACCTCCCCCT 62.876 63.158 0.00 0.00 0.00 4.79
187 190 3.347590 CCAACCTCCCCCTTCCCC 61.348 72.222 0.00 0.00 0.00 4.81
222 231 1.949847 CTGCCTCGTCCTTCCATCGT 61.950 60.000 0.00 0.00 0.00 3.73
225 234 1.064296 CTCGTCCTTCCATCGTCGG 59.936 63.158 0.00 0.00 0.00 4.79
234 243 2.261361 CATCGTCGGAGTGCACCA 59.739 61.111 14.63 0.00 0.00 4.17
238 247 2.094659 CGTCGGAGTGCACCATCAC 61.095 63.158 14.63 4.87 37.24 3.06
239 248 1.005037 GTCGGAGTGCACCATCACA 60.005 57.895 14.63 0.00 39.35 3.58
240 249 0.391661 GTCGGAGTGCACCATCACAT 60.392 55.000 14.63 0.00 39.35 3.21
242 251 0.107993 CGGAGTGCACCATCACATCT 60.108 55.000 14.63 0.00 39.35 2.90
243 252 1.661341 GGAGTGCACCATCACATCTC 58.339 55.000 14.63 0.33 39.35 2.75
244 253 1.209019 GGAGTGCACCATCACATCTCT 59.791 52.381 14.63 0.00 39.35 3.10
245 254 2.548875 GAGTGCACCATCACATCTCTC 58.451 52.381 14.63 0.00 39.35 3.20
246 255 1.904537 AGTGCACCATCACATCTCTCA 59.095 47.619 14.63 0.00 39.35 3.27
247 256 2.504585 AGTGCACCATCACATCTCTCAT 59.495 45.455 14.63 0.00 39.35 2.90
249 258 2.237893 TGCACCATCACATCTCTCATGT 59.762 45.455 0.00 0.00 0.00 3.21
262 271 1.918262 TCTCATGTCCAAGGCCATCTT 59.082 47.619 5.01 0.00 35.79 2.40
265 274 1.479323 CATGTCCAAGGCCATCTTTGG 59.521 52.381 14.03 14.03 46.66 3.28
274 283 2.444696 CATCTTTGGCCCCACCCA 59.555 61.111 0.00 0.00 37.83 4.51
275 284 1.229145 CATCTTTGGCCCCACCCAA 60.229 57.895 0.00 0.00 42.87 4.12
277 286 2.746947 ATCTTTGGCCCCACCCAACC 62.747 60.000 0.00 0.00 44.17 3.77
284 293 4.631740 CCCACCCAACCCCCAACC 62.632 72.222 0.00 0.00 0.00 3.77
300 310 1.602377 CAACCTCCTGTTTTCCGACAC 59.398 52.381 0.00 0.00 34.00 3.67
307 317 2.031157 CCTGTTTTCCGACACCAACATC 60.031 50.000 0.00 0.00 0.00 3.06
308 318 1.950909 TGTTTTCCGACACCAACATCC 59.049 47.619 0.00 0.00 0.00 3.51
314 324 0.322456 CGACACCAACATCCCCACAT 60.322 55.000 0.00 0.00 0.00 3.21
323 333 3.047807 ATCCCCACATCTGCACCCG 62.048 63.158 0.00 0.00 0.00 5.28
330 340 1.003355 CATCTGCACCCGTCAACCT 60.003 57.895 0.00 0.00 0.00 3.50
353 363 2.553727 CCTCGCCTACCTAGGACGC 61.554 68.421 17.98 12.30 46.63 5.19
358 368 2.420568 CCTACCTAGGACGCCGCAA 61.421 63.158 17.98 0.00 46.63 4.85
359 369 1.514087 CTACCTAGGACGCCGCAAA 59.486 57.895 17.98 0.00 0.00 3.68
360 370 0.804933 CTACCTAGGACGCCGCAAAC 60.805 60.000 17.98 0.00 0.00 2.93
361 371 2.546645 TACCTAGGACGCCGCAAACG 62.547 60.000 17.98 0.00 39.67 3.60
373 388 2.597217 CAAACGCCCTCCCAGCAA 60.597 61.111 0.00 0.00 0.00 3.91
376 391 2.713531 AAACGCCCTCCCAGCAACAT 62.714 55.000 0.00 0.00 0.00 2.71
404 420 3.474570 GGCGAGGTCCTGGCTCAT 61.475 66.667 23.39 0.00 35.57 2.90
410 426 2.060980 GGTCCTGGCTCATCCTCGT 61.061 63.158 0.00 0.00 35.26 4.18
414 430 3.144120 CTGGCTCATCCTCGTCGGG 62.144 68.421 0.00 0.00 35.26 5.14
424 440 1.153823 CTCGTCGGGATCAACGCTT 60.154 57.895 9.01 0.00 38.72 4.68
428 444 0.669318 GTCGGGATCAACGCTTGTCA 60.669 55.000 4.37 0.00 0.00 3.58
429 445 0.249120 TCGGGATCAACGCTTGTCAT 59.751 50.000 4.37 0.00 0.00 3.06
432 448 1.640428 GGATCAACGCTTGTCATCGA 58.360 50.000 0.00 0.00 0.00 3.59
438 454 2.839438 CGCTTGTCATCGACGCTCG 61.839 63.158 0.00 1.67 42.10 5.03
439 455 1.801913 GCTTGTCATCGACGCTCGT 60.802 57.895 0.00 0.00 41.35 4.18
443 459 2.097728 TCATCGACGCTCGTCACG 59.902 61.111 20.35 9.68 44.77 4.35
458 475 4.143333 ACGTCGCCCCATCTTCGG 62.143 66.667 0.00 0.00 0.00 4.30
467 484 1.699054 CCCATCTTCGGCCTCATCCA 61.699 60.000 0.00 0.00 0.00 3.41
472 489 2.159382 TCTTCGGCCTCATCCAAAAAC 58.841 47.619 0.00 0.00 0.00 2.43
477 494 1.534729 GCCTCATCCAAAAACCGACT 58.465 50.000 0.00 0.00 0.00 4.18
478 495 1.200020 GCCTCATCCAAAAACCGACTG 59.800 52.381 0.00 0.00 0.00 3.51
493 510 1.334960 CGACTGGTGCGAGCAAAATTT 60.335 47.619 0.00 0.00 0.00 1.82
496 513 4.201773 CGACTGGTGCGAGCAAAATTTATA 60.202 41.667 0.00 0.00 0.00 0.98
625 654 0.820871 CTCTCCCTTTGTCTCCTCCG 59.179 60.000 0.00 0.00 0.00 4.63
705 735 2.221517 CCATGGAAGCAAAAACAAAGCG 59.778 45.455 5.56 0.00 0.00 4.68
870 907 4.748679 CAACAGCTTGCTCCGCGC 62.749 66.667 0.00 0.00 39.77 6.86
929 966 2.123033 GAGCCCCTCTCCTCCTCC 60.123 72.222 0.00 0.00 35.77 4.30
936 973 1.394151 CTCTCCTCCTCCCCCAAGT 59.606 63.158 0.00 0.00 0.00 3.16
956 1003 6.295575 CCAAGTTTCTCTCTCTGAACCATACT 60.296 42.308 0.00 0.00 0.00 2.12
962 1009 5.191921 TCTCTCTCTGAACCATACTAGTCCA 59.808 44.000 0.00 0.00 0.00 4.02
973 1026 0.178932 ACTAGTCCACAGCCACAGGA 60.179 55.000 0.00 0.00 0.00 3.86
1095 1148 3.074538 ACACCCTGTAAGCAAATCCTCTT 59.925 43.478 0.00 0.00 0.00 2.85
1099 1152 4.397417 CCCTGTAAGCAAATCCTCTTCTTG 59.603 45.833 0.00 0.00 0.00 3.02
1103 1156 2.821307 GCAAATCCTCTTCTTGCTCG 57.179 50.000 0.00 0.00 41.74 5.03
1106 1159 0.908198 AATCCTCTTCTTGCTCGCCT 59.092 50.000 0.00 0.00 0.00 5.52
1107 1160 0.463620 ATCCTCTTCTTGCTCGCCTC 59.536 55.000 0.00 0.00 0.00 4.70
1108 1161 1.153469 CCTCTTCTTGCTCGCCTCC 60.153 63.158 0.00 0.00 0.00 4.30
1110 1163 2.124942 CTTCTTGCTCGCCTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
1111 1164 3.689002 CTTCTTGCTCGCCTCCCCC 62.689 68.421 0.00 0.00 0.00 5.40
1216 1270 1.203001 CCCTTTTGGTTCCTGGCTGTA 60.203 52.381 0.00 0.00 38.10 2.74
1228 1282 2.421529 CCTGGCTGTATTTGGTCCCTAC 60.422 54.545 0.00 0.00 0.00 3.18
1484 1538 4.354071 GAGGTTCTCGTCTACAAGGTAC 57.646 50.000 0.00 0.00 0.00 3.34
1528 1582 0.749049 GGCCCTGAAATTCATGAGCC 59.251 55.000 12.98 12.98 0.00 4.70
1623 1685 2.365293 GGTTTATGTTGATGGGGATGCC 59.635 50.000 0.00 0.00 0.00 4.40
1700 1763 0.323725 AGCAAGCACATAGTTGGGGG 60.324 55.000 0.00 0.00 0.00 5.40
1747 1810 2.557805 GCACTGACACCATGTGCG 59.442 61.111 2.23 0.00 45.62 5.34
1753 1820 0.321346 TGACACCATGTGCGTCTGAT 59.679 50.000 7.61 0.00 36.98 2.90
1891 1958 0.651031 GGAAGCTTTACGCCGATGAC 59.349 55.000 0.00 0.00 40.39 3.06
2040 2108 0.931005 GCTCTTATCCGTTTGAGGCG 59.069 55.000 0.00 0.00 0.00 5.52
2043 2111 3.799232 GCTCTTATCCGTTTGAGGCGTAT 60.799 47.826 0.00 0.00 0.00 3.06
2244 2312 4.024387 TGTGCGAAGAAGTTATTGGTTCAC 60.024 41.667 0.00 0.00 0.00 3.18
2262 2331 5.337250 GGTTCACTTCTTTTTCAACCTTGGT 60.337 40.000 0.00 0.00 32.16 3.67
2364 2436 2.245096 GACGCACACAATTCTGCATTC 58.755 47.619 0.00 0.00 32.57 2.67
2371 2443 4.802039 CACACAATTCTGCATTCTATTGCC 59.198 41.667 9.01 0.00 42.06 4.52
2406 2478 8.154856 CCATTTAGCCCTACTTAAGCTACATTA 58.845 37.037 1.29 0.00 38.77 1.90
2477 2550 3.254411 TCACTGTTGTTTGAAACACTGCA 59.746 39.130 10.72 9.18 41.97 4.41
2492 2565 6.882610 AACACTGCAAATCTGTTCAGATTA 57.117 33.333 22.79 10.85 37.52 1.75
2528 2601 4.222114 GCACTGAACACTTGATTAGTTGC 58.778 43.478 0.00 0.00 33.85 4.17
2563 2636 3.636300 AGTTGCAGTGTTTCTTATTGGCA 59.364 39.130 0.00 0.00 0.00 4.92
2567 2640 4.176271 GCAGTGTTTCTTATTGGCATTCC 58.824 43.478 0.00 0.00 0.00 3.01
2568 2641 4.321899 GCAGTGTTTCTTATTGGCATTCCA 60.322 41.667 0.00 0.00 41.55 3.53
2569 2642 5.625197 GCAGTGTTTCTTATTGGCATTCCAT 60.625 40.000 0.00 0.00 43.05 3.41
2570 2643 6.400568 CAGTGTTTCTTATTGGCATTCCATT 58.599 36.000 0.00 0.00 43.05 3.16
2571 2644 6.875195 CAGTGTTTCTTATTGGCATTCCATTT 59.125 34.615 0.00 0.00 43.05 2.32
2572 2645 6.875195 AGTGTTTCTTATTGGCATTCCATTTG 59.125 34.615 0.00 0.00 43.05 2.32
2573 2646 6.650390 GTGTTTCTTATTGGCATTCCATTTGT 59.350 34.615 0.00 0.00 43.05 2.83
2574 2647 6.873076 TGTTTCTTATTGGCATTCCATTTGTC 59.127 34.615 0.00 0.00 43.05 3.18
2575 2648 6.602410 TTCTTATTGGCATTCCATTTGTCA 57.398 33.333 0.00 0.00 43.05 3.58
2583 2665 4.462483 GGCATTCCATTTGTCAACTAGGAA 59.538 41.667 12.45 12.45 39.24 3.36
2631 2715 5.352284 ACTTTATGCCATACTCAAGAGACG 58.648 41.667 3.73 0.00 0.00 4.18
2639 2723 0.737715 ACTCAAGAGACGCATTCGGC 60.738 55.000 3.73 0.00 46.15 5.54
2661 2745 6.752168 GGCTATCCCGTTTAATTGAGTAGTA 58.248 40.000 0.00 0.00 0.00 1.82
2662 2746 6.644181 GGCTATCCCGTTTAATTGAGTAGTAC 59.356 42.308 0.00 0.00 0.00 2.73
2664 2748 7.381678 GCTATCCCGTTTAATTGAGTAGTACTG 59.618 40.741 7.76 0.00 0.00 2.74
2665 2749 6.839124 TCCCGTTTAATTGAGTAGTACTGA 57.161 37.500 7.76 0.00 0.00 3.41
2668 2752 7.977853 TCCCGTTTAATTGAGTAGTACTGAATC 59.022 37.037 14.35 2.93 30.83 2.52
2676 2760 7.421530 TTGAGTAGTACTGAATCTGTTTTGC 57.578 36.000 7.76 0.00 0.00 3.68
2681 2765 5.510671 AGTACTGAATCTGTTTTGCGTTTG 58.489 37.500 0.00 0.00 0.00 2.93
2706 2790 3.307480 GGGCAGTTGTGGTACTTCATAGT 60.307 47.826 0.00 0.00 38.44 2.12
2707 2791 4.324267 GGCAGTTGTGGTACTTCATAGTT 58.676 43.478 0.00 0.00 35.78 2.24
2708 2792 4.392138 GGCAGTTGTGGTACTTCATAGTTC 59.608 45.833 0.00 0.00 35.78 3.01
2709 2793 4.994852 GCAGTTGTGGTACTTCATAGTTCA 59.005 41.667 0.00 0.00 35.78 3.18
2750 2834 6.055231 TGCTGTTTGTCACACTAAATACAC 57.945 37.500 0.00 0.00 0.00 2.90
2752 2836 6.317642 TGCTGTTTGTCACACTAAATACACTT 59.682 34.615 0.00 0.00 0.00 3.16
2754 2838 7.618502 TGTTTGTCACACTAAATACACTTGT 57.381 32.000 0.00 0.00 0.00 3.16
2805 2889 2.743928 CCTGGAAGCTGCGTCCAC 60.744 66.667 29.33 8.80 40.33 4.02
2826 2910 6.016610 TCCACAAATAAAAACCAGTAGCAGTC 60.017 38.462 0.00 0.00 0.00 3.51
2854 2938 7.285172 TGCATTACTAGTGGCAATTGTCAATAT 59.715 33.333 19.35 12.41 29.57 1.28
2859 2943 5.571784 AGTGGCAATTGTCAATATCACAG 57.428 39.130 15.60 2.98 0.00 3.66
2907 2991 3.499745 GGGGGCGTGGAGGATATTTAAAT 60.500 47.826 5.89 5.89 0.00 1.40
2908 2992 3.506067 GGGGCGTGGAGGATATTTAAATG 59.494 47.826 11.05 0.00 0.00 2.32
2909 2993 4.142038 GGGCGTGGAGGATATTTAAATGT 58.858 43.478 11.05 3.86 0.00 2.71
2910 2994 4.023193 GGGCGTGGAGGATATTTAAATGTG 60.023 45.833 11.05 0.00 0.00 3.21
2911 2995 4.578928 GGCGTGGAGGATATTTAAATGTGT 59.421 41.667 11.05 0.00 0.00 3.72
2912 2996 5.505654 GGCGTGGAGGATATTTAAATGTGTG 60.506 44.000 11.05 0.00 0.00 3.82
2913 2997 5.295787 GCGTGGAGGATATTTAAATGTGTGA 59.704 40.000 11.05 0.00 0.00 3.58
2914 2998 6.715464 CGTGGAGGATATTTAAATGTGTGAC 58.285 40.000 11.05 0.00 0.00 3.67
2915 2999 6.315144 CGTGGAGGATATTTAAATGTGTGACA 59.685 38.462 11.05 1.38 0.00 3.58
2916 3000 7.012327 CGTGGAGGATATTTAAATGTGTGACAT 59.988 37.037 11.05 0.00 41.31 3.06
3349 3433 1.134580 CATCTCCTTGCATCGGACACT 60.135 52.381 1.35 0.00 0.00 3.55
3749 4066 4.415150 AGCCCCCGACGTACTCGA 62.415 66.667 13.90 0.00 46.14 4.04
4210 4962 7.556844 AGAGACCGTGTGACATTCTAATAATT 58.443 34.615 0.00 0.00 0.00 1.40
4240 4992 2.680339 GTTTCCTTAGCTGGCAGATCAC 59.320 50.000 20.86 0.00 0.00 3.06
4271 5023 2.095059 CCAAGGCAAGTGTTATCTGCAC 60.095 50.000 0.00 0.00 37.13 4.57
4342 5094 1.075542 TAATGAACTGTGCCGCTTCG 58.924 50.000 0.00 0.00 0.00 3.79
4407 5388 2.242926 TCAGACTAGACAGCAGCTTGT 58.757 47.619 0.00 0.00 0.00 3.16
4435 5418 2.132517 TTGTGCTGCAAGTGCCATCG 62.133 55.000 2.77 0.00 41.18 3.84
4440 5423 3.512516 GCAAGTGCCATCGAGCCC 61.513 66.667 0.00 0.00 34.31 5.19
4458 5441 1.586422 CCCACCTCTAATGTGCATCG 58.414 55.000 0.00 0.00 32.30 3.84
4480 5463 4.251268 GTGGTTACAGGTACACAAGATCC 58.749 47.826 0.00 0.00 34.16 3.36
4774 5757 1.739338 GACCATCCTCCGCAGATCGT 61.739 60.000 0.00 0.00 36.19 3.73
4802 5785 2.778679 CGAAAGCCGAAGCCGAAG 59.221 61.111 0.00 0.00 41.25 3.79
4803 5786 2.481009 GAAAGCCGAAGCCGAAGC 59.519 61.111 0.00 0.00 41.25 3.86
4804 5787 3.040414 GAAAGCCGAAGCCGAAGCC 62.040 63.158 0.00 0.00 41.25 4.35
4808 5791 4.735132 CCGAAGCCGAAGCCGTCA 62.735 66.667 0.00 0.00 41.25 4.35
4809 5792 3.181967 CGAAGCCGAAGCCGTCAG 61.182 66.667 0.00 0.00 41.25 3.51
4941 5925 8.528044 TGAAGGTTTTTACTTGTTTGGTATCT 57.472 30.769 0.00 0.00 0.00 1.98
5006 5990 3.126831 CGCTGGGTAATGAGTCAATCTC 58.873 50.000 0.00 0.00 43.03 2.75
5019 6009 3.134623 AGTCAATCTCTGTGTGTCACCAA 59.865 43.478 0.00 0.00 32.73 3.67
5047 6037 4.520492 GGTGGAAAAAGAGCTCTTCATGAA 59.480 41.667 28.58 12.45 34.61 2.57
5048 6038 5.184671 GGTGGAAAAAGAGCTCTTCATGAAT 59.815 40.000 28.58 9.85 34.61 2.57
5049 6039 6.320944 GTGGAAAAAGAGCTCTTCATGAATC 58.679 40.000 28.58 18.19 34.61 2.52
5050 6040 6.005823 TGGAAAAAGAGCTCTTCATGAATCA 58.994 36.000 28.58 16.65 34.61 2.57
5051 6041 6.662234 TGGAAAAAGAGCTCTTCATGAATCAT 59.338 34.615 28.58 7.55 34.61 2.45
5052 6042 6.973474 GGAAAAAGAGCTCTTCATGAATCATG 59.027 38.462 28.58 16.63 42.60 3.07
5069 6059 3.801698 TCATGAATCTGCTACTGCTTCC 58.198 45.455 0.00 0.00 40.48 3.46
5102 6092 0.874390 CGGTTATGTTGTGCAGCACT 59.126 50.000 25.83 8.64 35.11 4.40
5103 6093 1.266718 CGGTTATGTTGTGCAGCACTT 59.733 47.619 25.83 10.88 35.11 3.16
5133 6123 9.575868 TTCTGGTACCAGTTCAAAATTTATGTA 57.424 29.630 35.34 12.47 43.96 2.29
5174 6164 8.572855 TGAACCACATCACATGTTCATAATAA 57.427 30.769 0.00 0.00 42.70 1.40
5176 6166 7.031226 ACCACATCACATGTTCATAATAAGC 57.969 36.000 0.00 0.00 42.70 3.09
5187 6182 2.632996 TCATAATAAGCACTCCCTCCGG 59.367 50.000 0.00 0.00 0.00 5.14
5204 6199 3.537580 TCCGGTCCACAATAATAAGTGC 58.462 45.455 0.00 0.00 34.48 4.40
5209 6204 2.680841 TCCACAATAATAAGTGCCGTGC 59.319 45.455 0.00 0.00 34.48 5.34
5214 6209 6.318628 CACAATAATAAGTGCCGTGCTTTTA 58.681 36.000 0.00 0.00 0.00 1.52
5239 6861 6.261381 AGTTCAAACTAAAATCACGGCACTTA 59.739 34.615 0.00 0.00 37.52 2.24
5252 6874 5.883115 TCACGGCACTTATTATGGATTCAAA 59.117 36.000 0.00 0.00 0.00 2.69
5269 6891 5.867903 TTCAAATTTGGGTCATGAAGTGT 57.132 34.783 17.90 0.00 0.00 3.55
5270 6892 5.199024 TCAAATTTGGGTCATGAAGTGTG 57.801 39.130 17.90 0.00 0.00 3.82
5325 6947 2.486472 AATGGTCAGAGAAGCACTGG 57.514 50.000 0.00 0.00 36.22 4.00
5327 6949 0.681733 TGGTCAGAGAAGCACTGGTC 59.318 55.000 0.00 0.00 36.22 4.02
5328 6950 0.972883 GGTCAGAGAAGCACTGGTCT 59.027 55.000 0.00 0.00 36.22 3.85
5329 6951 1.337635 GGTCAGAGAAGCACTGGTCTG 60.338 57.143 0.00 4.00 38.23 3.51
5331 6953 0.972134 CAGAGAAGCACTGGTCTGGA 59.028 55.000 0.00 0.00 34.06 3.86
5332 6954 1.345741 CAGAGAAGCACTGGTCTGGAA 59.654 52.381 0.00 0.00 34.06 3.53
5333 6955 1.346068 AGAGAAGCACTGGTCTGGAAC 59.654 52.381 0.00 0.00 0.00 3.62
5334 6956 1.346068 GAGAAGCACTGGTCTGGAACT 59.654 52.381 0.00 0.00 0.00 3.01
5335 6957 1.071385 AGAAGCACTGGTCTGGAACTG 59.929 52.381 0.00 0.00 0.00 3.16
5343 6965 1.004918 GTCTGGAACTGACGGGGTG 60.005 63.158 0.00 0.00 46.49 4.61
5344 6966 2.358737 CTGGAACTGACGGGGTGC 60.359 66.667 0.00 0.00 0.00 5.01
5346 6968 2.668550 GGAACTGACGGGGTGCAC 60.669 66.667 8.80 8.80 0.00 4.57
5347 6969 2.426023 GAACTGACGGGGTGCACT 59.574 61.111 17.98 0.00 0.00 4.40
5349 6971 1.227853 AACTGACGGGGTGCACTTC 60.228 57.895 17.98 9.41 0.00 3.01
5352 6974 1.227823 TGACGGGGTGCACTTCAAG 60.228 57.895 17.98 9.69 0.00 3.02
5353 6975 2.594592 ACGGGGTGCACTTCAAGC 60.595 61.111 17.98 0.00 0.00 4.01
5354 6976 2.281761 CGGGGTGCACTTCAAGCT 60.282 61.111 17.98 0.00 0.00 3.74
5355 6977 2.620112 CGGGGTGCACTTCAAGCTG 61.620 63.158 17.98 0.00 0.00 4.24
5356 6978 2.647297 GGGTGCACTTCAAGCTGC 59.353 61.111 17.98 5.34 0.00 5.25
5358 6980 1.735360 GGTGCACTTCAAGCTGCAA 59.265 52.632 17.98 0.30 44.82 4.08
5359 6981 0.316204 GGTGCACTTCAAGCTGCAAT 59.684 50.000 17.98 0.00 44.82 3.56
5361 6983 2.476821 GTGCACTTCAAGCTGCAATTT 58.523 42.857 10.32 0.00 44.82 1.82
5362 6984 3.552684 GGTGCACTTCAAGCTGCAATTTA 60.553 43.478 17.98 0.00 44.82 1.40
5363 6985 4.240096 GTGCACTTCAAGCTGCAATTTAT 58.760 39.130 10.32 0.00 44.82 1.40
5364 6986 5.401550 GTGCACTTCAAGCTGCAATTTATA 58.598 37.500 10.32 0.00 44.82 0.98
5365 6987 5.863397 GTGCACTTCAAGCTGCAATTTATAA 59.137 36.000 10.32 0.00 44.82 0.98
5367 6989 6.095377 GCACTTCAAGCTGCAATTTATAAGT 58.905 36.000 1.02 0.00 33.31 2.24
5369 6991 6.749118 CACTTCAAGCTGCAATTTATAAGTCC 59.251 38.462 1.02 0.00 0.00 3.85
5370 6992 6.434028 ACTTCAAGCTGCAATTTATAAGTCCA 59.566 34.615 1.02 0.00 0.00 4.02
5371 6993 6.194796 TCAAGCTGCAATTTATAAGTCCAC 57.805 37.500 1.02 0.00 0.00 4.02
5372 6994 4.882671 AGCTGCAATTTATAAGTCCACG 57.117 40.909 1.02 0.00 0.00 4.94
5373 6995 3.627577 AGCTGCAATTTATAAGTCCACGG 59.372 43.478 1.02 0.00 0.00 4.94
5375 6997 4.495844 GCTGCAATTTATAAGTCCACGGAC 60.496 45.833 8.23 8.23 44.86 4.79
5376 6998 4.580868 TGCAATTTATAAGTCCACGGACA 58.419 39.130 18.21 0.00 46.76 4.02
5378 7000 6.350103 TGCAATTTATAAGTCCACGGACATA 58.650 36.000 18.21 11.03 46.76 2.29
5379 7001 6.824196 TGCAATTTATAAGTCCACGGACATAA 59.176 34.615 18.21 10.99 46.76 1.90
5381 7003 7.012044 GCAATTTATAAGTCCACGGACATAAGT 59.988 37.037 18.21 8.31 46.76 2.24
5382 7004 8.889717 CAATTTATAAGTCCACGGACATAAGTT 58.110 33.333 18.21 12.91 46.76 2.66
5383 7005 9.457436 AATTTATAAGTCCACGGACATAAGTTT 57.543 29.630 18.21 5.34 46.76 2.66
5385 7007 9.941325 TTTATAAGTCCACGGACATAAGTTTAA 57.059 29.630 18.21 4.10 46.76 1.52
5386 7008 9.590451 TTATAAGTCCACGGACATAAGTTTAAG 57.410 33.333 18.21 0.00 46.76 1.85
5387 7009 5.479124 AGTCCACGGACATAAGTTTAAGT 57.521 39.130 18.21 0.00 46.76 2.24
5388 7010 5.861727 AGTCCACGGACATAAGTTTAAGTT 58.138 37.500 18.21 0.00 46.76 2.66
5389 7011 6.293698 AGTCCACGGACATAAGTTTAAGTTT 58.706 36.000 18.21 0.00 46.76 2.66
5390 7012 6.204108 AGTCCACGGACATAAGTTTAAGTTTG 59.796 38.462 18.21 0.00 46.76 2.93
5391 7013 6.203338 GTCCACGGACATAAGTTTAAGTTTGA 59.797 38.462 11.43 0.00 44.02 2.69
5394 7016 7.069569 CACGGACATAAGTTTAAGTTTGACAG 58.930 38.462 0.00 0.00 0.00 3.51
5395 7017 6.204108 ACGGACATAAGTTTAAGTTTGACAGG 59.796 38.462 0.00 0.00 0.00 4.00
5396 7018 6.348213 CGGACATAAGTTTAAGTTTGACAGGG 60.348 42.308 0.00 0.00 0.00 4.45
5397 7019 6.489022 GGACATAAGTTTAAGTTTGACAGGGT 59.511 38.462 0.00 0.00 0.00 4.34
5398 7020 7.272037 ACATAAGTTTAAGTTTGACAGGGTG 57.728 36.000 0.00 0.00 0.00 4.61
5399 7021 4.649088 AAGTTTAAGTTTGACAGGGTGC 57.351 40.909 0.00 0.00 0.00 5.01
5400 7022 3.898482 AGTTTAAGTTTGACAGGGTGCT 58.102 40.909 0.00 0.00 0.00 4.40
5404 7026 1.901591 AGTTTGACAGGGTGCTCATG 58.098 50.000 0.00 0.00 0.00 3.07
5405 7027 0.883833 GTTTGACAGGGTGCTCATGG 59.116 55.000 0.00 0.00 0.00 3.66
5406 7028 0.770499 TTTGACAGGGTGCTCATGGA 59.230 50.000 0.00 0.00 0.00 3.41
5407 7029 0.770499 TTGACAGGGTGCTCATGGAA 59.230 50.000 0.00 0.00 0.00 3.53
5408 7030 0.325933 TGACAGGGTGCTCATGGAAG 59.674 55.000 0.00 0.00 0.00 3.46
5409 7031 1.001641 ACAGGGTGCTCATGGAAGC 60.002 57.895 0.00 0.00 42.82 3.86
5421 7043 4.791974 CTCATGGAAGCAGTCAACTTTTC 58.208 43.478 0.00 0.00 0.00 2.29
5429 7051 1.021968 AGTCAACTTTTCACGGCCAC 58.978 50.000 2.24 0.00 0.00 5.01
5441 7063 2.890311 TCACGGCCACTGAAATTGAAAT 59.110 40.909 2.24 0.00 0.00 2.17
5442 7064 3.057596 TCACGGCCACTGAAATTGAAATC 60.058 43.478 2.24 0.00 0.00 2.17
5445 7067 4.202202 ACGGCCACTGAAATTGAAATCAAA 60.202 37.500 2.24 0.00 39.55 2.69
5455 7077 7.523219 TGAAATTGAAATCAAATGCAGATTGC 58.477 30.769 9.54 4.54 40.76 3.56
5460 7082 3.520290 ATCAAATGCAGATTGCTGTGG 57.480 42.857 9.54 0.00 45.31 4.17
5468 7090 2.947652 GCAGATTGCTGTGGATGTACAT 59.052 45.455 8.43 8.43 44.17 2.29
5469 7091 4.129380 GCAGATTGCTGTGGATGTACATA 58.871 43.478 8.71 0.00 44.17 2.29
5472 7094 6.128445 GCAGATTGCTGTGGATGTACATATAC 60.128 42.308 8.71 11.19 44.17 1.47
5499 7124 3.751175 TGATGATGACCCAACGAAACTTC 59.249 43.478 0.00 0.00 0.00 3.01
5500 7125 3.485463 TGATGACCCAACGAAACTTCT 57.515 42.857 0.00 0.00 0.00 2.85
5501 7126 3.815809 TGATGACCCAACGAAACTTCTT 58.184 40.909 0.00 0.00 0.00 2.52
5502 7127 3.563808 TGATGACCCAACGAAACTTCTTG 59.436 43.478 0.00 0.00 0.00 3.02
5503 7128 2.294074 TGACCCAACGAAACTTCTTGG 58.706 47.619 10.99 10.99 36.30 3.61
5504 7129 2.294979 GACCCAACGAAACTTCTTGGT 58.705 47.619 14.32 0.00 35.53 3.67
5552 7177 6.824553 TCTAGGTTGGATGATCTCTTCAATG 58.175 40.000 0.00 0.00 38.03 2.82
5555 7180 5.191323 AGGTTGGATGATCTCTTCAATGAGT 59.809 40.000 0.00 0.00 38.03 3.41
5556 7181 5.884792 GGTTGGATGATCTCTTCAATGAGTT 59.115 40.000 0.00 0.00 38.03 3.01
5557 7182 6.038050 GGTTGGATGATCTCTTCAATGAGTTC 59.962 42.308 0.00 0.00 38.03 3.01
5558 7183 6.303903 TGGATGATCTCTTCAATGAGTTCA 57.696 37.500 7.46 7.46 42.97 3.18
5559 7184 6.714278 TGGATGATCTCTTCAATGAGTTCAA 58.286 36.000 8.66 0.00 42.45 2.69
5560 7185 7.344134 TGGATGATCTCTTCAATGAGTTCAAT 58.656 34.615 8.66 0.92 42.45 2.57
5561 7186 7.498239 TGGATGATCTCTTCAATGAGTTCAATC 59.502 37.037 8.66 7.42 42.45 2.67
5562 7187 7.498239 GGATGATCTCTTCAATGAGTTCAATCA 59.502 37.037 8.66 3.77 42.45 2.57
5563 7188 7.845066 TGATCTCTTCAATGAGTTCAATCAG 57.155 36.000 0.00 0.00 38.84 2.90
5564 7189 7.618137 TGATCTCTTCAATGAGTTCAATCAGA 58.382 34.615 0.00 0.00 38.84 3.27
5565 7190 8.265764 TGATCTCTTCAATGAGTTCAATCAGAT 58.734 33.333 0.00 0.00 38.84 2.90
5566 7191 9.761504 GATCTCTTCAATGAGTTCAATCAGATA 57.238 33.333 0.00 0.00 34.59 1.98
5567 7192 9.767228 ATCTCTTCAATGAGTTCAATCAGATAG 57.233 33.333 0.00 0.00 35.68 2.08
5568 7193 8.202811 TCTCTTCAATGAGTTCAATCAGATAGG 58.797 37.037 0.00 0.00 35.68 2.57
5569 7194 7.278135 TCTTCAATGAGTTCAATCAGATAGGG 58.722 38.462 0.00 0.00 31.44 3.53
5570 7195 6.813293 TCAATGAGTTCAATCAGATAGGGA 57.187 37.500 0.00 0.00 31.44 4.20
5571 7196 7.384524 TCAATGAGTTCAATCAGATAGGGAT 57.615 36.000 0.00 0.00 31.44 3.85
5572 7197 7.222161 TCAATGAGTTCAATCAGATAGGGATG 58.778 38.462 0.00 0.00 31.44 3.51
5573 7198 6.760440 ATGAGTTCAATCAGATAGGGATGT 57.240 37.500 0.00 0.00 31.44 3.06
5574 7199 5.922053 TGAGTTCAATCAGATAGGGATGTG 58.078 41.667 0.00 0.00 0.00 3.21
5575 7200 5.662657 TGAGTTCAATCAGATAGGGATGTGA 59.337 40.000 0.00 0.00 39.50 3.58
5576 7201 6.156775 TGAGTTCAATCAGATAGGGATGTGAA 59.843 38.462 0.00 0.00 38.72 3.18
5577 7202 6.352516 AGTTCAATCAGATAGGGATGTGAAC 58.647 40.000 11.57 11.57 38.72 3.18
5578 7203 5.296151 TCAATCAGATAGGGATGTGAACC 57.704 43.478 0.00 0.00 38.72 3.62
5579 7204 4.060900 CAATCAGATAGGGATGTGAACCG 58.939 47.826 0.00 0.00 38.72 4.44
5580 7205 2.039418 TCAGATAGGGATGTGAACCGG 58.961 52.381 0.00 0.00 32.65 5.28
5581 7206 1.070758 CAGATAGGGATGTGAACCGGG 59.929 57.143 6.32 0.00 0.00 5.73
5582 7207 1.129058 GATAGGGATGTGAACCGGGT 58.871 55.000 6.32 0.00 0.00 5.28
5583 7208 1.070289 GATAGGGATGTGAACCGGGTC 59.930 57.143 14.24 14.24 0.00 4.46
5584 7209 0.979187 TAGGGATGTGAACCGGGTCC 60.979 60.000 19.01 9.16 0.00 4.46
5585 7210 2.271173 GGATGTGAACCGGGTCCC 59.729 66.667 19.01 5.86 0.00 4.46
5586 7211 2.598787 GGATGTGAACCGGGTCCCA 61.599 63.158 19.01 13.30 0.00 4.37
5587 7212 1.607612 GATGTGAACCGGGTCCCAT 59.392 57.895 18.06 18.06 0.00 4.00
5588 7213 0.034477 GATGTGAACCGGGTCCCATT 60.034 55.000 19.01 2.81 0.00 3.16
5589 7214 0.407918 ATGTGAACCGGGTCCCATTT 59.592 50.000 19.01 0.00 0.00 2.32
5590 7215 1.065647 TGTGAACCGGGTCCCATTTA 58.934 50.000 19.01 0.00 0.00 1.40
5591 7216 1.424302 TGTGAACCGGGTCCCATTTAA 59.576 47.619 19.01 0.00 0.00 1.52
5592 7217 2.041891 TGTGAACCGGGTCCCATTTAAT 59.958 45.455 19.01 0.00 0.00 1.40
5593 7218 2.686405 GTGAACCGGGTCCCATTTAATC 59.314 50.000 19.01 0.00 0.00 1.75
5594 7219 2.304092 GAACCGGGTCCCATTTAATCC 58.696 52.381 8.85 0.00 0.00 3.01
5595 7220 0.554305 ACCGGGTCCCATTTAATCCC 59.446 55.000 9.12 0.00 35.22 3.85
5598 7223 2.447408 GGGTCCCATTTAATCCCGTT 57.553 50.000 1.78 0.00 0.00 4.44
5599 7224 2.742348 GGGTCCCATTTAATCCCGTTT 58.258 47.619 1.78 0.00 0.00 3.60
5600 7225 3.900971 GGGTCCCATTTAATCCCGTTTA 58.099 45.455 1.78 0.00 0.00 2.01
5601 7226 4.279982 GGGTCCCATTTAATCCCGTTTAA 58.720 43.478 1.78 0.00 0.00 1.52
5602 7227 4.710865 GGGTCCCATTTAATCCCGTTTAAA 59.289 41.667 1.78 0.00 35.98 1.52
5603 7228 5.394443 GGGTCCCATTTAATCCCGTTTAAAC 60.394 44.000 8.35 8.35 34.75 2.01
5604 7229 5.394443 GGTCCCATTTAATCCCGTTTAAACC 60.394 44.000 12.66 0.00 34.75 3.27
5605 7230 4.710865 TCCCATTTAATCCCGTTTAAACCC 59.289 41.667 12.66 0.00 34.75 4.11
5606 7231 4.466726 CCCATTTAATCCCGTTTAAACCCA 59.533 41.667 12.66 0.00 34.75 4.51
5607 7232 5.412640 CCATTTAATCCCGTTTAAACCCAC 58.587 41.667 12.66 0.00 34.75 4.61
5608 7233 5.186215 CCATTTAATCCCGTTTAAACCCACT 59.814 40.000 12.66 0.00 34.75 4.00
5609 7234 6.377712 CCATTTAATCCCGTTTAAACCCACTA 59.622 38.462 12.66 0.00 34.75 2.74
5610 7235 7.068962 CCATTTAATCCCGTTTAAACCCACTAT 59.931 37.037 12.66 0.00 34.75 2.12
5611 7236 9.122779 CATTTAATCCCGTTTAAACCCACTATA 57.877 33.333 12.66 0.00 34.75 1.31
5612 7237 9.871175 ATTTAATCCCGTTTAAACCCACTATAT 57.129 29.630 12.66 0.00 34.75 0.86
5616 7241 9.511272 AATCCCGTTTAAACCCACTATATAATC 57.489 33.333 12.66 0.00 0.00 1.75
5617 7242 7.153985 TCCCGTTTAAACCCACTATATAATCG 58.846 38.462 12.66 0.00 0.00 3.34
5618 7243 7.015098 TCCCGTTTAAACCCACTATATAATCGA 59.985 37.037 12.66 0.00 0.00 3.59
5619 7244 7.656948 CCCGTTTAAACCCACTATATAATCGAA 59.343 37.037 12.66 0.00 0.00 3.71
5620 7245 8.490355 CCGTTTAAACCCACTATATAATCGAAC 58.510 37.037 12.66 0.00 0.00 3.95
5621 7246 9.033481 CGTTTAAACCCACTATATAATCGAACA 57.967 33.333 12.66 0.00 0.00 3.18
5665 7290 7.642071 TTTCTGCAAAAATGAACTATGAAGC 57.358 32.000 0.00 0.00 0.00 3.86
5666 7291 6.579666 TCTGCAAAAATGAACTATGAAGCT 57.420 33.333 0.00 0.00 0.00 3.74
5667 7292 7.686438 TCTGCAAAAATGAACTATGAAGCTA 57.314 32.000 0.00 0.00 0.00 3.32
5668 7293 7.755591 TCTGCAAAAATGAACTATGAAGCTAG 58.244 34.615 0.00 0.00 0.00 3.42
5669 7294 6.855836 TGCAAAAATGAACTATGAAGCTAGG 58.144 36.000 0.00 0.00 0.00 3.02
5670 7295 5.745769 GCAAAAATGAACTATGAAGCTAGGC 59.254 40.000 0.00 0.00 0.00 3.93
5671 7296 6.625740 GCAAAAATGAACTATGAAGCTAGGCA 60.626 38.462 0.00 0.00 0.00 4.75
5672 7297 7.315142 CAAAAATGAACTATGAAGCTAGGCAA 58.685 34.615 0.00 0.00 0.00 4.52
5673 7298 6.442513 AAATGAACTATGAAGCTAGGCAAC 57.557 37.500 0.00 0.00 0.00 4.17
5674 7299 3.521560 TGAACTATGAAGCTAGGCAACG 58.478 45.455 0.00 0.00 46.39 4.10
5675 7300 1.941325 ACTATGAAGCTAGGCAACGC 58.059 50.000 0.00 0.00 46.39 4.84
5676 7301 1.482593 ACTATGAAGCTAGGCAACGCT 59.517 47.619 0.00 0.00 46.39 5.07
5677 7302 2.693591 ACTATGAAGCTAGGCAACGCTA 59.306 45.455 0.00 0.00 46.39 4.26
5678 7303 2.691409 ATGAAGCTAGGCAACGCTAA 57.309 45.000 0.00 0.00 46.39 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.686630 TGATGAATATGTGCTTTCGGTTTTT 58.313 32.000 0.00 0.00 0.00 1.94
2 3 6.150976 TCTGATGAATATGTGCTTTCGGTTTT 59.849 34.615 0.00 0.00 0.00 2.43
3 4 5.647658 TCTGATGAATATGTGCTTTCGGTTT 59.352 36.000 0.00 0.00 0.00 3.27
5 6 4.769688 TCTGATGAATATGTGCTTTCGGT 58.230 39.130 0.00 0.00 0.00 4.69
6 7 5.936686 ATCTGATGAATATGTGCTTTCGG 57.063 39.130 0.00 0.00 0.00 4.30
7 8 6.648310 AGGTATCTGATGAATATGTGCTTTCG 59.352 38.462 0.00 0.00 0.00 3.46
8 9 7.976135 AGGTATCTGATGAATATGTGCTTTC 57.024 36.000 0.00 0.00 0.00 2.62
9 10 9.851686 TTTAGGTATCTGATGAATATGTGCTTT 57.148 29.630 0.00 0.00 0.00 3.51
10 11 9.851686 TTTTAGGTATCTGATGAATATGTGCTT 57.148 29.630 0.00 0.00 0.00 3.91
11 12 9.277783 GTTTTAGGTATCTGATGAATATGTGCT 57.722 33.333 0.00 0.00 0.00 4.40
12 13 8.223769 CGTTTTAGGTATCTGATGAATATGTGC 58.776 37.037 0.00 0.00 0.00 4.57
13 14 8.712363 CCGTTTTAGGTATCTGATGAATATGTG 58.288 37.037 0.00 0.00 0.00 3.21
14 15 8.429641 ACCGTTTTAGGTATCTGATGAATATGT 58.570 33.333 0.00 0.00 43.89 2.29
15 16 8.833231 ACCGTTTTAGGTATCTGATGAATATG 57.167 34.615 0.00 0.00 43.89 1.78
16 17 9.847224 AAACCGTTTTAGGTATCTGATGAATAT 57.153 29.630 0.00 0.00 45.21 1.28
17 18 9.675464 AAAACCGTTTTAGGTATCTGATGAATA 57.325 29.630 7.49 0.00 45.21 1.75
18 19 8.458843 CAAAACCGTTTTAGGTATCTGATGAAT 58.541 33.333 8.90 0.00 45.21 2.57
19 20 7.574217 GCAAAACCGTTTTAGGTATCTGATGAA 60.574 37.037 8.90 0.00 45.21 2.57
20 21 6.128117 GCAAAACCGTTTTAGGTATCTGATGA 60.128 38.462 8.90 0.00 45.21 2.92
21 22 6.027749 GCAAAACCGTTTTAGGTATCTGATG 58.972 40.000 8.90 0.00 45.21 3.07
22 23 5.124936 GGCAAAACCGTTTTAGGTATCTGAT 59.875 40.000 8.90 0.00 45.21 2.90
23 24 4.456566 GGCAAAACCGTTTTAGGTATCTGA 59.543 41.667 8.90 0.00 45.21 3.27
24 25 4.216687 TGGCAAAACCGTTTTAGGTATCTG 59.783 41.667 8.90 0.00 45.21 2.90
25 26 4.216902 GTGGCAAAACCGTTTTAGGTATCT 59.783 41.667 8.90 0.00 45.21 1.98
26 27 4.478699 GTGGCAAAACCGTTTTAGGTATC 58.521 43.478 8.90 0.00 45.21 2.24
27 28 3.256383 GGTGGCAAAACCGTTTTAGGTAT 59.744 43.478 8.90 0.00 45.21 2.73
28 29 2.622470 GGTGGCAAAACCGTTTTAGGTA 59.378 45.455 8.90 0.00 45.21 3.08
30 31 2.143008 GGTGGCAAAACCGTTTTAGG 57.857 50.000 8.90 0.00 43.94 2.69
38 39 0.175989 TTTCAACCGGTGGCAAAACC 59.824 50.000 8.52 0.00 39.84 3.27
39 40 2.011540 TTTTCAACCGGTGGCAAAAC 57.988 45.000 8.52 0.00 0.00 2.43
40 41 2.990066 ATTTTCAACCGGTGGCAAAA 57.010 40.000 10.95 14.34 0.00 2.44
41 42 3.306364 CCATATTTTCAACCGGTGGCAAA 60.306 43.478 8.52 9.00 0.00 3.68
42 43 2.232452 CCATATTTTCAACCGGTGGCAA 59.768 45.455 8.52 0.00 0.00 4.52
43 44 1.821753 CCATATTTTCAACCGGTGGCA 59.178 47.619 8.52 0.00 0.00 4.92
44 45 2.096248 TCCATATTTTCAACCGGTGGC 58.904 47.619 8.52 0.00 0.00 5.01
45 46 2.099098 GCTCCATATTTTCAACCGGTGG 59.901 50.000 8.52 4.63 0.00 4.61
46 47 2.223249 CGCTCCATATTTTCAACCGGTG 60.223 50.000 8.52 2.16 0.00 4.94
47 48 2.014128 CGCTCCATATTTTCAACCGGT 58.986 47.619 0.00 0.00 0.00 5.28
48 49 2.014128 ACGCTCCATATTTTCAACCGG 58.986 47.619 0.00 0.00 0.00 5.28
49 50 2.285602 CGACGCTCCATATTTTCAACCG 60.286 50.000 0.00 0.00 0.00 4.44
50 51 2.031683 CCGACGCTCCATATTTTCAACC 59.968 50.000 0.00 0.00 0.00 3.77
51 52 2.933906 TCCGACGCTCCATATTTTCAAC 59.066 45.455 0.00 0.00 0.00 3.18
52 53 3.254470 TCCGACGCTCCATATTTTCAA 57.746 42.857 0.00 0.00 0.00 2.69
53 54 2.971660 TCCGACGCTCCATATTTTCA 57.028 45.000 0.00 0.00 0.00 2.69
54 55 3.390135 TGATCCGACGCTCCATATTTTC 58.610 45.455 0.00 0.00 0.00 2.29
55 56 3.469008 TGATCCGACGCTCCATATTTT 57.531 42.857 0.00 0.00 0.00 1.82
56 57 3.006859 TGATGATCCGACGCTCCATATTT 59.993 43.478 0.00 0.00 0.00 1.40
57 58 2.562738 TGATGATCCGACGCTCCATATT 59.437 45.455 0.00 0.00 0.00 1.28
58 59 2.171003 TGATGATCCGACGCTCCATAT 58.829 47.619 0.00 0.00 0.00 1.78
59 60 1.616159 TGATGATCCGACGCTCCATA 58.384 50.000 0.00 0.00 0.00 2.74
60 61 0.972134 ATGATGATCCGACGCTCCAT 59.028 50.000 0.00 0.00 0.00 3.41
61 62 0.315251 GATGATGATCCGACGCTCCA 59.685 55.000 0.00 0.00 0.00 3.86
62 63 0.389166 GGATGATGATCCGACGCTCC 60.389 60.000 0.00 0.00 39.04 4.70
63 64 3.114558 GGATGATGATCCGACGCTC 57.885 57.895 0.00 0.00 39.04 5.03
71 72 3.355378 TGGTGGTTGTTGGATGATGATC 58.645 45.455 0.00 0.00 0.00 2.92
72 73 3.454719 TGGTGGTTGTTGGATGATGAT 57.545 42.857 0.00 0.00 0.00 2.45
73 74 2.890311 GTTGGTGGTTGTTGGATGATGA 59.110 45.455 0.00 0.00 0.00 2.92
74 75 2.029110 GGTTGGTGGTTGTTGGATGATG 60.029 50.000 0.00 0.00 0.00 3.07
75 76 2.247358 GGTTGGTGGTTGTTGGATGAT 58.753 47.619 0.00 0.00 0.00 2.45
96 97 6.587608 GGAAAGAAGATGAACAATGCGATTTT 59.412 34.615 0.00 0.00 0.00 1.82
102 103 3.511146 TGGGGAAAGAAGATGAACAATGC 59.489 43.478 0.00 0.00 0.00 3.56
105 106 4.739793 ACATGGGGAAAGAAGATGAACAA 58.260 39.130 0.00 0.00 0.00 2.83
119 120 1.555075 CGAGGAAGAAGAACATGGGGA 59.445 52.381 0.00 0.00 0.00 4.81
124 125 1.732732 CGACGCGAGGAAGAAGAACAT 60.733 52.381 15.93 0.00 0.00 2.71
125 126 0.386858 CGACGCGAGGAAGAAGAACA 60.387 55.000 15.93 0.00 0.00 3.18
126 127 0.386985 ACGACGCGAGGAAGAAGAAC 60.387 55.000 15.93 0.00 0.00 3.01
128 129 1.500844 GACGACGCGAGGAAGAAGA 59.499 57.895 15.93 0.00 0.00 2.87
129 130 1.863880 CGACGACGCGAGGAAGAAG 60.864 63.158 15.93 0.00 0.00 2.85
130 131 2.175078 CGACGACGCGAGGAAGAA 59.825 61.111 15.93 0.00 0.00 2.52
160 161 2.599757 GGAGGTTGGCGGTTAGGGT 61.600 63.158 0.00 0.00 0.00 4.34
170 171 3.347590 GGGGAAGGGGGAGGTTGG 61.348 72.222 0.00 0.00 0.00 3.77
172 173 2.127528 GAGGGGAAGGGGGAGGTT 59.872 66.667 0.00 0.00 0.00 3.50
173 174 4.040198 GGAGGGGAAGGGGGAGGT 62.040 72.222 0.00 0.00 0.00 3.85
200 203 4.821589 GGAAGGACGAGGCAGCGG 62.822 72.222 4.86 0.00 35.12 5.52
201 204 3.376935 ATGGAAGGACGAGGCAGCG 62.377 63.158 0.00 0.00 37.29 5.18
202 205 1.522580 GATGGAAGGACGAGGCAGC 60.523 63.158 0.00 0.00 0.00 5.25
203 206 1.227089 CGATGGAAGGACGAGGCAG 60.227 63.158 0.00 0.00 0.00 4.85
204 207 1.945354 GACGATGGAAGGACGAGGCA 61.945 60.000 0.00 0.00 0.00 4.75
206 209 1.064296 CGACGATGGAAGGACGAGG 59.936 63.158 0.00 0.00 0.00 4.63
208 211 1.374343 CTCCGACGATGGAAGGACGA 61.374 60.000 0.00 0.00 37.64 4.20
210 213 0.179134 CACTCCGACGATGGAAGGAC 60.179 60.000 0.00 0.00 37.64 3.85
211 214 1.945354 GCACTCCGACGATGGAAGGA 61.945 60.000 0.00 0.00 37.64 3.36
222 231 0.108186 GATGTGATGGTGCACTCCGA 60.108 55.000 17.98 0.00 39.49 4.55
225 234 2.093816 TGAGAGATGTGATGGTGCACTC 60.094 50.000 17.98 8.04 39.49 3.51
234 243 3.433314 GCCTTGGACATGAGAGATGTGAT 60.433 47.826 0.00 0.00 31.52 3.06
238 247 1.211212 TGGCCTTGGACATGAGAGATG 59.789 52.381 3.32 0.00 0.00 2.90
239 248 1.588239 TGGCCTTGGACATGAGAGAT 58.412 50.000 3.32 0.00 0.00 2.75
240 249 1.487976 GATGGCCTTGGACATGAGAGA 59.512 52.381 13.44 0.00 0.00 3.10
242 251 1.588239 AGATGGCCTTGGACATGAGA 58.412 50.000 13.44 0.00 0.00 3.27
243 252 2.426024 CAAAGATGGCCTTGGACATGAG 59.574 50.000 13.44 0.00 34.79 2.90
244 253 2.449464 CAAAGATGGCCTTGGACATGA 58.551 47.619 13.44 0.00 34.79 3.07
245 254 1.479323 CCAAAGATGGCCTTGGACATG 59.521 52.381 13.44 0.00 40.58 3.21
246 255 1.856629 CCAAAGATGGCCTTGGACAT 58.143 50.000 14.89 7.87 40.58 3.06
247 256 3.362040 CCAAAGATGGCCTTGGACA 57.638 52.632 14.89 0.00 40.58 4.02
266 275 4.631740 GTTGGGGGTTGGGTGGGG 62.632 72.222 0.00 0.00 0.00 4.96
270 279 3.190391 GGAGGTTGGGGGTTGGGT 61.190 66.667 0.00 0.00 0.00 4.51
271 280 2.863988 AGGAGGTTGGGGGTTGGG 60.864 66.667 0.00 0.00 0.00 4.12
274 283 0.639943 AAAACAGGAGGTTGGGGGTT 59.360 50.000 0.00 0.00 40.35 4.11
275 284 0.187606 GAAAACAGGAGGTTGGGGGT 59.812 55.000 0.00 0.00 40.35 4.95
277 286 0.893727 CGGAAAACAGGAGGTTGGGG 60.894 60.000 0.00 0.00 40.35 4.96
279 288 1.235724 GTCGGAAAACAGGAGGTTGG 58.764 55.000 0.00 0.00 40.35 3.77
281 290 1.476291 GGTGTCGGAAAACAGGAGGTT 60.476 52.381 0.00 0.00 42.98 3.50
284 293 1.602377 GTTGGTGTCGGAAAACAGGAG 59.398 52.381 0.00 0.00 0.00 3.69
300 310 0.323633 TGCAGATGTGGGGATGTTGG 60.324 55.000 0.00 0.00 0.00 3.77
307 317 3.976701 GACGGGTGCAGATGTGGGG 62.977 68.421 0.00 0.00 0.00 4.96
308 318 2.436646 GACGGGTGCAGATGTGGG 60.437 66.667 0.00 0.00 0.00 4.61
314 324 2.425592 CAGGTTGACGGGTGCAGA 59.574 61.111 0.00 0.00 0.00 4.26
323 333 2.035442 GGCGAGGAAGCAGGTTGAC 61.035 63.158 0.00 0.00 39.27 3.18
330 340 0.755698 CCTAGGTAGGCGAGGAAGCA 60.756 60.000 0.00 0.00 36.53 3.91
358 368 3.210012 ATGTTGCTGGGAGGGCGTT 62.210 57.895 0.00 0.00 0.00 4.84
359 369 3.628646 GATGTTGCTGGGAGGGCGT 62.629 63.158 0.00 0.00 0.00 5.68
360 370 2.825836 GATGTTGCTGGGAGGGCG 60.826 66.667 0.00 0.00 0.00 6.13
361 371 2.440980 GGATGTTGCTGGGAGGGC 60.441 66.667 0.00 0.00 0.00 5.19
363 378 1.941403 ATGGGGATGTTGCTGGGAGG 61.941 60.000 0.00 0.00 0.00 4.30
372 387 2.919043 GCCGGAGATGGGGATGTT 59.081 61.111 5.05 0.00 0.00 2.71
373 388 3.550431 CGCCGGAGATGGGGATGT 61.550 66.667 5.05 0.00 44.30 3.06
410 426 0.249120 ATGACAAGCGTTGATCCCGA 59.751 50.000 6.11 0.00 0.00 5.14
414 430 1.007011 CGTCGATGACAAGCGTTGATC 60.007 52.381 0.00 0.00 36.36 2.92
428 444 2.097918 GACGTGACGAGCGTCGAT 59.902 61.111 13.70 5.96 46.85 3.59
438 454 1.810030 GAAGATGGGGCGACGTGAC 60.810 63.158 0.00 0.00 0.00 3.67
439 455 2.577059 GAAGATGGGGCGACGTGA 59.423 61.111 0.00 0.00 0.00 4.35
458 475 1.200020 CAGTCGGTTTTTGGATGAGGC 59.800 52.381 0.00 0.00 0.00 4.70
467 484 1.782028 GCTCGCACCAGTCGGTTTTT 61.782 55.000 0.00 0.00 46.31 1.94
472 489 1.577328 ATTTTGCTCGCACCAGTCGG 61.577 55.000 0.00 0.00 38.77 4.79
477 494 4.013728 ACCTATAAATTTTGCTCGCACCA 58.986 39.130 0.00 0.00 0.00 4.17
478 495 4.632538 ACCTATAAATTTTGCTCGCACC 57.367 40.909 0.00 0.00 0.00 5.01
530 547 9.882996 CGTATTTCCACTATCGTAGTACAAATA 57.117 33.333 0.38 0.00 37.23 1.40
532 549 7.761409 ACGTATTTCCACTATCGTAGTACAAA 58.239 34.615 0.38 0.00 37.23 2.83
546 564 9.640963 ATGAGCTTATAATCTACGTATTTCCAC 57.359 33.333 0.00 0.00 0.00 4.02
555 573 6.323266 AGCGGTTATGAGCTTATAATCTACG 58.677 40.000 16.81 16.37 41.52 3.51
625 654 5.582269 GGAAATGCTTGGGAATAAAGAAAGC 59.418 40.000 0.00 0.00 42.78 3.51
705 735 0.670162 TCTGTGGCTGCTTTGCTTTC 59.330 50.000 0.00 0.00 0.00 2.62
929 966 3.558109 GGTTCAGAGAGAGAAACTTGGGG 60.558 52.174 0.00 0.00 30.14 4.96
936 973 6.603997 GGACTAGTATGGTTCAGAGAGAGAAA 59.396 42.308 0.00 0.00 0.00 2.52
956 1003 0.904865 CCTCCTGTGGCTGTGGACTA 60.905 60.000 0.00 0.00 0.00 2.59
962 1009 0.109342 CAAGAACCTCCTGTGGCTGT 59.891 55.000 0.00 0.00 0.00 4.40
973 1026 2.115266 CCGGCAACCCAAGAACCT 59.885 61.111 0.00 0.00 0.00 3.50
1120 1173 5.930837 ACAACACCCAGAATCAAGAAAAA 57.069 34.783 0.00 0.00 0.00 1.94
1216 1270 4.998051 ACATGTCAAAGTAGGGACCAAAT 58.002 39.130 0.00 0.00 33.09 2.32
1228 1282 6.848800 CACAAATTGCATCAAACATGTCAAAG 59.151 34.615 0.00 0.00 0.00 2.77
1484 1538 4.443394 GCAGCAAAGACTGAATGAAACAAG 59.557 41.667 0.00 0.00 40.25 3.16
1500 1554 0.832983 ATTTCAGGGCCTGCAGCAAA 60.833 50.000 29.02 22.40 46.50 3.68
1501 1555 0.832983 AATTTCAGGGCCTGCAGCAA 60.833 50.000 29.02 14.88 46.50 3.91
1623 1685 3.668447 CCTTTCGATGGTGGATATGGAG 58.332 50.000 0.00 0.00 0.00 3.86
1700 1763 3.829026 AGGCCTGAAACTGAAGAATTTCC 59.171 43.478 3.11 0.00 34.52 3.13
1701 1764 5.459536 AAGGCCTGAAACTGAAGAATTTC 57.540 39.130 5.69 0.00 35.73 2.17
1753 1820 4.936224 TATGGCTGCATTCCATGGCACA 62.936 50.000 23.44 1.82 43.67 4.57
1891 1958 2.564553 CTTCCCTCTCGGCGTCCTTG 62.565 65.000 6.85 0.00 0.00 3.61
2074 2142 1.065102 CGTGTGACGTGGGGACTATAG 59.935 57.143 0.00 0.00 36.74 1.31
2244 2312 4.114794 CAGCACCAAGGTTGAAAAAGAAG 58.885 43.478 0.00 0.00 0.00 2.85
2262 2331 1.168407 GGAGCAGCTCACAAACAGCA 61.168 55.000 24.09 0.00 39.56 4.41
2364 2436 3.303351 AATGGAGTTGGAGGGCAATAG 57.697 47.619 0.00 0.00 0.00 1.73
2371 2443 1.566231 AGGGCTAAATGGAGTTGGAGG 59.434 52.381 0.00 0.00 0.00 4.30
2406 2478 9.657419 GGTGTGAATTTTGAATATTTTGGAGAT 57.343 29.630 0.00 0.00 0.00 2.75
2492 2565 3.182341 TCAGTGCAAGCAAAGCAAAAT 57.818 38.095 0.00 0.00 44.64 1.82
2528 2601 0.538057 TGCAACTTCCAGCTTCCAGG 60.538 55.000 0.00 0.00 0.00 4.45
2563 2636 8.655935 AATCTTTCCTAGTTGACAAATGGAAT 57.344 30.769 15.40 4.24 34.18 3.01
2571 2644 9.832445 GGATTATGTAATCTTTCCTAGTTGACA 57.168 33.333 11.38 0.00 41.33 3.58
2572 2645 9.832445 TGGATTATGTAATCTTTCCTAGTTGAC 57.168 33.333 11.38 0.00 41.33 3.18
2575 2648 9.628500 GGTTGGATTATGTAATCTTTCCTAGTT 57.372 33.333 11.38 0.00 41.33 2.24
2583 2665 8.695456 GTTGGAATGGTTGGATTATGTAATCTT 58.305 33.333 11.38 0.00 41.33 2.40
2631 2715 1.873698 TAAACGGGATAGCCGAATGC 58.126 50.000 0.00 0.00 41.71 3.56
2639 2723 8.627403 TCAGTACTACTCAATTAAACGGGATAG 58.373 37.037 0.00 0.00 0.00 2.08
2658 2742 5.295787 TCAAACGCAAAACAGATTCAGTACT 59.704 36.000 0.00 0.00 0.00 2.73
2659 2743 5.507077 TCAAACGCAAAACAGATTCAGTAC 58.493 37.500 0.00 0.00 0.00 2.73
2661 2745 4.630894 TCAAACGCAAAACAGATTCAGT 57.369 36.364 0.00 0.00 0.00 3.41
2662 2746 4.383649 CCATCAAACGCAAAACAGATTCAG 59.616 41.667 0.00 0.00 0.00 3.02
2664 2748 3.674753 CCCATCAAACGCAAAACAGATTC 59.325 43.478 0.00 0.00 0.00 2.52
2665 2749 3.652274 CCCATCAAACGCAAAACAGATT 58.348 40.909 0.00 0.00 0.00 2.40
2668 2752 1.139163 GCCCATCAAACGCAAAACAG 58.861 50.000 0.00 0.00 0.00 3.16
2676 2760 0.039256 CCACAACTGCCCATCAAACG 60.039 55.000 0.00 0.00 0.00 3.60
2681 2765 2.084546 GAAGTACCACAACTGCCCATC 58.915 52.381 0.00 0.00 0.00 3.51
2706 2790 4.644685 GCAGGGCTTTAAGAATGGTATGAA 59.355 41.667 0.00 0.00 0.00 2.57
2707 2791 4.079787 AGCAGGGCTTTAAGAATGGTATGA 60.080 41.667 0.00 0.00 33.89 2.15
2708 2792 4.037208 CAGCAGGGCTTTAAGAATGGTATG 59.963 45.833 0.00 0.00 36.40 2.39
2709 2793 4.210331 CAGCAGGGCTTTAAGAATGGTAT 58.790 43.478 0.00 0.00 36.40 2.73
2750 2834 8.830580 CCATACCACTGATAAAATAGTCACAAG 58.169 37.037 0.00 0.00 0.00 3.16
2752 2836 8.084985 TCCATACCACTGATAAAATAGTCACA 57.915 34.615 0.00 0.00 0.00 3.58
2805 2889 6.381801 CAGGACTGCTACTGGTTTTTATTTG 58.618 40.000 0.00 0.00 0.00 2.32
2826 2910 3.696051 ACAATTGCCACTAGTAATGCAGG 59.304 43.478 5.05 2.80 34.81 4.85
2854 2938 2.023673 CCCTTCAAGTTTGTGCTGTGA 58.976 47.619 0.00 0.00 0.00 3.58
2859 2943 3.670627 CGCTTATCCCTTCAAGTTTGTGC 60.671 47.826 0.00 0.00 0.00 4.57
3349 3433 0.964860 CGTGGTGCAATGGGGATTCA 60.965 55.000 0.00 0.00 0.00 2.57
4157 4909 1.001633 GAGACAGGGCGAAACCTAACA 59.998 52.381 0.00 0.00 39.34 2.41
4210 4962 6.658849 TGCCAGCTAAGGAAACATAATTAGA 58.341 36.000 0.00 0.00 0.00 2.10
4271 5023 1.403225 CTATGACACACACGACGCCG 61.403 60.000 0.00 0.00 42.50 6.46
4333 5085 0.531090 AACACTGTAACGAAGCGGCA 60.531 50.000 1.45 0.00 0.00 5.69
4342 5094 1.969589 CGGCCCCCAACACTGTAAC 60.970 63.158 0.00 0.00 0.00 2.50
4407 5388 0.816373 TTGCAGCACAACAGAAAGCA 59.184 45.000 0.00 0.00 31.73 3.91
4415 5396 0.665369 GATGGCACTTGCAGCACAAC 60.665 55.000 0.00 0.00 44.36 3.32
4418 5399 2.177531 CGATGGCACTTGCAGCAC 59.822 61.111 0.00 0.00 44.36 4.40
4435 5418 0.464554 GCACATTAGAGGTGGGGCTC 60.465 60.000 0.00 0.00 36.76 4.70
4440 5423 1.935873 CACGATGCACATTAGAGGTGG 59.064 52.381 0.00 0.00 36.76 4.61
4458 5441 4.251268 GGATCTTGTGTACCTGTAACCAC 58.749 47.826 0.00 0.00 0.00 4.16
4480 5463 2.401766 GCAGAATGGGCACGACTGG 61.402 63.158 8.49 0.00 35.86 4.00
4709 5692 1.819288 AGTACATCATCGCTATCCCCG 59.181 52.381 0.00 0.00 0.00 5.73
4712 5695 5.394802 CACTGTAGTACATCATCGCTATCC 58.605 45.833 2.82 0.00 0.00 2.59
4774 5757 3.343972 GCTTTCGCTTGCCAGACA 58.656 55.556 0.00 0.00 0.00 3.41
4800 5783 0.315568 GACTGACTGACTGACGGCTT 59.684 55.000 0.00 0.00 0.00 4.35
4801 5784 1.528292 GGACTGACTGACTGACGGCT 61.528 60.000 0.00 0.00 0.00 5.52
4802 5785 1.080434 GGACTGACTGACTGACGGC 60.080 63.158 0.00 0.00 0.00 5.68
4803 5786 1.210413 CGGACTGACTGACTGACGG 59.790 63.158 0.00 0.00 0.00 4.79
4804 5787 0.311165 AACGGACTGACTGACTGACG 59.689 55.000 0.00 0.00 0.00 4.35
4805 5788 2.128035 CAAACGGACTGACTGACTGAC 58.872 52.381 0.00 0.00 0.00 3.51
4806 5789 1.538204 GCAAACGGACTGACTGACTGA 60.538 52.381 0.00 0.00 0.00 3.41
4807 5790 0.861837 GCAAACGGACTGACTGACTG 59.138 55.000 0.00 0.00 0.00 3.51
4808 5791 0.249911 GGCAAACGGACTGACTGACT 60.250 55.000 0.00 0.00 0.00 3.41
4809 5792 0.531974 TGGCAAACGGACTGACTGAC 60.532 55.000 0.00 0.00 0.00 3.51
4985 5969 3.126831 GAGATTGACTCATTACCCAGCG 58.873 50.000 0.00 0.00 44.36 5.18
5006 5990 2.780065 CCAATGTTGGTGACACACAG 57.220 50.000 8.08 0.00 42.04 3.66
5019 6009 3.837355 AGAGCTCTTTTTCCACCAATGT 58.163 40.909 11.45 0.00 0.00 2.71
5027 6017 6.506500 TGATTCATGAAGAGCTCTTTTTCC 57.493 37.500 29.02 16.89 36.11 3.13
5047 6037 4.102838 AGGAAGCAGTAGCAGATTCATGAT 59.897 41.667 0.00 0.00 45.49 2.45
5048 6038 3.453717 AGGAAGCAGTAGCAGATTCATGA 59.546 43.478 0.00 0.00 45.49 3.07
5049 6039 3.806380 AGGAAGCAGTAGCAGATTCATG 58.194 45.455 0.00 0.00 45.49 3.07
5050 6040 3.181456 GGAGGAAGCAGTAGCAGATTCAT 60.181 47.826 0.00 0.00 45.49 2.57
5051 6041 2.169352 GGAGGAAGCAGTAGCAGATTCA 59.831 50.000 0.00 0.00 45.49 2.57
5052 6042 2.484594 GGGAGGAAGCAGTAGCAGATTC 60.485 54.545 0.00 0.00 45.49 2.52
5053 6043 1.488393 GGGAGGAAGCAGTAGCAGATT 59.512 52.381 0.00 0.00 45.49 2.40
5054 6044 1.127343 GGGAGGAAGCAGTAGCAGAT 58.873 55.000 0.00 0.00 45.49 2.90
5069 6059 0.250553 TAACCGCACCACAAAGGGAG 60.251 55.000 0.00 0.00 43.89 4.30
5140 6130 9.558396 AACATGTGATGTGGTTCATAAATTTTT 57.442 25.926 0.00 0.00 44.07 1.94
5151 6141 7.122501 TGCTTATTATGAACATGTGATGTGGTT 59.877 33.333 0.00 0.00 44.07 3.67
5187 6182 3.486875 GCACGGCACTTATTATTGTGGAC 60.487 47.826 0.00 0.00 34.99 4.02
5214 6209 4.578928 AGTGCCGTGATTTTAGTTTGAACT 59.421 37.500 1.60 1.60 42.91 3.01
5228 6850 5.029807 TGAATCCATAATAAGTGCCGTGA 57.970 39.130 0.00 0.00 0.00 4.35
5239 6861 8.321621 TCATGACCCAAATTTGAATCCATAAT 57.678 30.769 19.86 3.71 0.00 1.28
5252 6874 1.895131 GGCACACTTCATGACCCAAAT 59.105 47.619 0.00 0.00 0.00 2.32
5269 6891 1.604604 CTTTCTTCGGGTTTCTGGCA 58.395 50.000 0.00 0.00 0.00 4.92
5270 6892 0.241213 GCTTTCTTCGGGTTTCTGGC 59.759 55.000 0.00 0.00 0.00 4.85
5325 6947 1.004918 CACCCCGTCAGTTCCAGAC 60.005 63.158 0.00 0.00 0.00 3.51
5327 6949 2.358737 GCACCCCGTCAGTTCCAG 60.359 66.667 0.00 0.00 0.00 3.86
5328 6950 3.164977 TGCACCCCGTCAGTTCCA 61.165 61.111 0.00 0.00 0.00 3.53
5329 6951 2.668550 GTGCACCCCGTCAGTTCC 60.669 66.667 5.22 0.00 0.00 3.62
5331 6953 1.227853 GAAGTGCACCCCGTCAGTT 60.228 57.895 14.63 0.00 0.00 3.16
5332 6954 1.978455 TTGAAGTGCACCCCGTCAGT 61.978 55.000 14.63 0.00 0.00 3.41
5333 6955 1.227823 TTGAAGTGCACCCCGTCAG 60.228 57.895 14.63 0.00 0.00 3.51
5334 6956 1.227823 CTTGAAGTGCACCCCGTCA 60.228 57.895 14.63 9.54 0.00 4.35
5335 6957 2.617274 GCTTGAAGTGCACCCCGTC 61.617 63.158 14.63 6.85 0.00 4.79
5338 6960 2.924105 GCAGCTTGAAGTGCACCCC 61.924 63.158 14.63 6.15 39.62 4.95
5339 6961 2.195567 TGCAGCTTGAAGTGCACCC 61.196 57.895 14.63 6.56 44.70 4.61
5340 6962 3.435590 TGCAGCTTGAAGTGCACC 58.564 55.556 14.63 0.00 44.70 5.01
5343 6965 6.095377 ACTTATAAATTGCAGCTTGAAGTGC 58.905 36.000 11.17 11.17 40.29 4.40
5344 6966 6.749118 GGACTTATAAATTGCAGCTTGAAGTG 59.251 38.462 12.64 0.00 0.00 3.16
5346 6968 6.749118 GTGGACTTATAAATTGCAGCTTGAAG 59.251 38.462 0.00 0.00 0.00 3.02
5347 6969 6.620678 GTGGACTTATAAATTGCAGCTTGAA 58.379 36.000 0.00 0.00 0.00 2.69
5349 6971 5.030295 CGTGGACTTATAAATTGCAGCTTG 58.970 41.667 0.00 0.00 0.00 4.01
5352 6974 3.625764 TCCGTGGACTTATAAATTGCAGC 59.374 43.478 0.00 0.00 0.00 5.25
5353 6975 4.634004 TGTCCGTGGACTTATAAATTGCAG 59.366 41.667 19.17 0.00 44.80 4.41
5354 6976 4.580868 TGTCCGTGGACTTATAAATTGCA 58.419 39.130 19.17 0.00 44.80 4.08
5355 6977 5.751243 ATGTCCGTGGACTTATAAATTGC 57.249 39.130 19.17 0.00 44.80 3.56
5356 6978 8.433421 ACTTATGTCCGTGGACTTATAAATTG 57.567 34.615 19.17 7.59 44.80 2.32
5359 6981 9.941325 TTAAACTTATGTCCGTGGACTTATAAA 57.059 29.630 19.17 4.89 44.80 1.40
5361 6983 8.752187 ACTTAAACTTATGTCCGTGGACTTATA 58.248 33.333 19.17 7.63 44.80 0.98
5362 6984 7.618137 ACTTAAACTTATGTCCGTGGACTTAT 58.382 34.615 19.17 8.56 44.80 1.73
5363 6985 6.996509 ACTTAAACTTATGTCCGTGGACTTA 58.003 36.000 19.17 14.27 44.80 2.24
5364 6986 5.861727 ACTTAAACTTATGTCCGTGGACTT 58.138 37.500 19.17 15.23 44.80 3.01
5365 6987 5.479124 ACTTAAACTTATGTCCGTGGACT 57.521 39.130 19.17 8.12 44.80 3.85
5367 6989 6.203338 GTCAAACTTAAACTTATGTCCGTGGA 59.797 38.462 0.00 0.00 0.00 4.02
5369 6991 6.950545 TGTCAAACTTAAACTTATGTCCGTG 58.049 36.000 0.00 0.00 0.00 4.94
5370 6992 6.204108 CCTGTCAAACTTAAACTTATGTCCGT 59.796 38.462 0.00 0.00 0.00 4.69
5371 6993 6.348213 CCCTGTCAAACTTAAACTTATGTCCG 60.348 42.308 0.00 0.00 0.00 4.79
5372 6994 6.489022 ACCCTGTCAAACTTAAACTTATGTCC 59.511 38.462 0.00 0.00 0.00 4.02
5373 6995 7.360361 CACCCTGTCAAACTTAAACTTATGTC 58.640 38.462 0.00 0.00 0.00 3.06
5375 6997 6.016276 AGCACCCTGTCAAACTTAAACTTATG 60.016 38.462 0.00 0.00 0.00 1.90
5376 6998 6.068670 AGCACCCTGTCAAACTTAAACTTAT 58.931 36.000 0.00 0.00 0.00 1.73
5378 7000 4.278310 AGCACCCTGTCAAACTTAAACTT 58.722 39.130 0.00 0.00 0.00 2.66
5379 7001 3.883489 GAGCACCCTGTCAAACTTAAACT 59.117 43.478 0.00 0.00 0.00 2.66
5381 7003 3.892284 TGAGCACCCTGTCAAACTTAAA 58.108 40.909 0.00 0.00 0.00 1.52
5382 7004 3.569194 TGAGCACCCTGTCAAACTTAA 57.431 42.857 0.00 0.00 0.00 1.85
5383 7005 3.411446 CATGAGCACCCTGTCAAACTTA 58.589 45.455 0.00 0.00 0.00 2.24
5384 7006 2.233271 CATGAGCACCCTGTCAAACTT 58.767 47.619 0.00 0.00 0.00 2.66
5385 7007 1.546323 CCATGAGCACCCTGTCAAACT 60.546 52.381 0.00 0.00 0.00 2.66
5386 7008 0.883833 CCATGAGCACCCTGTCAAAC 59.116 55.000 0.00 0.00 0.00 2.93
5387 7009 0.770499 TCCATGAGCACCCTGTCAAA 59.230 50.000 0.00 0.00 0.00 2.69
5388 7010 0.770499 TTCCATGAGCACCCTGTCAA 59.230 50.000 0.00 0.00 0.00 3.18
5389 7011 0.325933 CTTCCATGAGCACCCTGTCA 59.674 55.000 0.00 0.00 0.00 3.58
5390 7012 1.028868 GCTTCCATGAGCACCCTGTC 61.029 60.000 0.00 0.00 42.25 3.51
5391 7013 1.001641 GCTTCCATGAGCACCCTGT 60.002 57.895 0.00 0.00 42.25 4.00
5398 7020 1.818642 AGTTGACTGCTTCCATGAGC 58.181 50.000 0.00 0.00 43.00 4.26
5399 7021 4.276678 TGAAAAGTTGACTGCTTCCATGAG 59.723 41.667 0.00 0.00 0.00 2.90
5400 7022 4.036734 GTGAAAAGTTGACTGCTTCCATGA 59.963 41.667 0.00 0.00 0.00 3.07
5404 7026 2.287009 CCGTGAAAAGTTGACTGCTTCC 60.287 50.000 0.00 0.00 0.00 3.46
5405 7027 2.854805 GCCGTGAAAAGTTGACTGCTTC 60.855 50.000 0.00 0.00 0.00 3.86
5406 7028 1.065551 GCCGTGAAAAGTTGACTGCTT 59.934 47.619 0.00 0.00 0.00 3.91
5407 7029 0.663153 GCCGTGAAAAGTTGACTGCT 59.337 50.000 0.00 0.00 0.00 4.24
5408 7030 0.317854 GGCCGTGAAAAGTTGACTGC 60.318 55.000 0.00 0.00 0.00 4.40
5409 7031 1.021202 TGGCCGTGAAAAGTTGACTG 58.979 50.000 0.00 0.00 0.00 3.51
5410 7032 1.021968 GTGGCCGTGAAAAGTTGACT 58.978 50.000 0.00 0.00 0.00 3.41
5421 7043 2.791383 TTTCAATTTCAGTGGCCGTG 57.209 45.000 0.00 0.00 0.00 4.94
5429 7051 7.692291 GCAATCTGCATTTGATTTCAATTTCAG 59.308 33.333 12.36 7.88 44.26 3.02
5455 7077 2.661675 GCGCGTATATGTACATCCACAG 59.338 50.000 12.68 9.14 0.00 3.66
5460 7082 4.412207 TCATCAGCGCGTATATGTACATC 58.588 43.478 12.68 0.00 0.00 3.06
5468 7090 1.067846 GGGTCATCATCAGCGCGTATA 60.068 52.381 8.43 0.00 0.00 1.47
5469 7091 0.319900 GGGTCATCATCAGCGCGTAT 60.320 55.000 8.43 0.00 0.00 3.06
5472 7094 1.815003 TTGGGTCATCATCAGCGCG 60.815 57.895 0.00 0.00 0.00 6.86
5499 7124 1.334869 AGCGCTGAAGTTGAAACCAAG 59.665 47.619 10.39 0.00 0.00 3.61
5500 7125 1.065401 CAGCGCTGAAGTTGAAACCAA 59.935 47.619 33.66 0.00 0.00 3.67
5501 7126 0.662619 CAGCGCTGAAGTTGAAACCA 59.337 50.000 33.66 0.00 0.00 3.67
5502 7127 0.661483 GCAGCGCTGAAGTTGAAACC 60.661 55.000 40.21 14.87 0.00 3.27
5503 7128 0.308993 AGCAGCGCTGAAGTTGAAAC 59.691 50.000 40.21 18.87 37.57 2.78
5504 7129 0.588252 GAGCAGCGCTGAAGTTGAAA 59.412 50.000 40.21 0.00 39.88 2.69
5552 7177 6.166984 TCACATCCCTATCTGATTGAACTC 57.833 41.667 0.00 0.00 0.00 3.01
5555 7180 5.684704 GGTTCACATCCCTATCTGATTGAA 58.315 41.667 0.00 0.00 0.00 2.69
5556 7181 4.202253 CGGTTCACATCCCTATCTGATTGA 60.202 45.833 0.00 0.00 0.00 2.57
5557 7182 4.060900 CGGTTCACATCCCTATCTGATTG 58.939 47.826 0.00 0.00 0.00 2.67
5558 7183 3.071602 CCGGTTCACATCCCTATCTGATT 59.928 47.826 0.00 0.00 0.00 2.57
5559 7184 2.634940 CCGGTTCACATCCCTATCTGAT 59.365 50.000 0.00 0.00 0.00 2.90
5560 7185 2.039418 CCGGTTCACATCCCTATCTGA 58.961 52.381 0.00 0.00 0.00 3.27
5561 7186 1.070758 CCCGGTTCACATCCCTATCTG 59.929 57.143 0.00 0.00 0.00 2.90
5562 7187 1.344087 ACCCGGTTCACATCCCTATCT 60.344 52.381 0.00 0.00 0.00 1.98
5563 7188 1.070289 GACCCGGTTCACATCCCTATC 59.930 57.143 0.00 0.00 0.00 2.08
5564 7189 1.129058 GACCCGGTTCACATCCCTAT 58.871 55.000 0.00 0.00 0.00 2.57
5565 7190 0.979187 GGACCCGGTTCACATCCCTA 60.979 60.000 0.00 0.00 0.00 3.53
5566 7191 2.298661 GGACCCGGTTCACATCCCT 61.299 63.158 0.00 0.00 0.00 4.20
5567 7192 2.271173 GGACCCGGTTCACATCCC 59.729 66.667 0.00 0.00 0.00 3.85
5568 7193 1.921869 ATGGGACCCGGTTCACATCC 61.922 60.000 11.57 0.00 34.27 3.51
5569 7194 0.034477 AATGGGACCCGGTTCACATC 60.034 55.000 18.02 0.00 38.78 3.06
5570 7195 0.407918 AAATGGGACCCGGTTCACAT 59.592 50.000 11.57 11.57 41.67 3.21
5571 7196 1.065647 TAAATGGGACCCGGTTCACA 58.934 50.000 6.34 6.34 32.02 3.58
5572 7197 2.203470 TTAAATGGGACCCGGTTCAC 57.797 50.000 5.91 0.00 0.00 3.18
5573 7198 2.357361 GGATTAAATGGGACCCGGTTCA 60.357 50.000 5.91 0.00 0.00 3.18
5574 7199 2.304092 GGATTAAATGGGACCCGGTTC 58.696 52.381 5.91 0.00 0.00 3.62
5575 7200 1.063492 GGGATTAAATGGGACCCGGTT 60.063 52.381 5.91 4.84 0.00 4.44
5576 7201 0.554305 GGGATTAAATGGGACCCGGT 59.446 55.000 5.91 0.00 0.00 5.28
5577 7202 3.432262 GGGATTAAATGGGACCCGG 57.568 57.895 5.91 0.00 0.00 5.73
5579 7204 2.447408 AACGGGATTAAATGGGACCC 57.553 50.000 2.45 2.45 37.42 4.46
5580 7205 5.394443 GGTTTAAACGGGATTAAATGGGACC 60.394 44.000 12.07 0.00 37.17 4.46
5581 7206 5.394443 GGGTTTAAACGGGATTAAATGGGAC 60.394 44.000 12.07 0.00 37.17 4.46
5582 7207 4.710865 GGGTTTAAACGGGATTAAATGGGA 59.289 41.667 12.07 0.00 37.17 4.37
5583 7208 4.466726 TGGGTTTAAACGGGATTAAATGGG 59.533 41.667 12.07 0.00 37.17 4.00
5584 7209 5.186215 AGTGGGTTTAAACGGGATTAAATGG 59.814 40.000 12.07 0.00 37.17 3.16
5585 7210 6.275494 AGTGGGTTTAAACGGGATTAAATG 57.725 37.500 12.07 0.00 37.17 2.32
5586 7211 9.871175 ATATAGTGGGTTTAAACGGGATTAAAT 57.129 29.630 12.07 1.90 37.17 1.40
5590 7215 9.511272 GATTATATAGTGGGTTTAAACGGGATT 57.489 33.333 12.07 0.20 0.00 3.01
5591 7216 7.820872 CGATTATATAGTGGGTTTAAACGGGAT 59.179 37.037 12.07 4.21 0.00 3.85
5592 7217 7.015098 TCGATTATATAGTGGGTTTAAACGGGA 59.985 37.037 12.07 0.00 0.00 5.14
5593 7218 7.153985 TCGATTATATAGTGGGTTTAAACGGG 58.846 38.462 12.07 0.00 0.00 5.28
5594 7219 8.490355 GTTCGATTATATAGTGGGTTTAAACGG 58.510 37.037 12.07 0.00 0.00 4.44
5595 7220 9.033481 TGTTCGATTATATAGTGGGTTTAAACG 57.967 33.333 12.07 0.00 0.00 3.60
5639 7264 8.715088 GCTTCATAGTTCATTTTTGCAGAAAAT 58.285 29.630 6.49 9.53 31.07 1.82
5640 7265 7.927629 AGCTTCATAGTTCATTTTTGCAGAAAA 59.072 29.630 6.49 7.71 0.00 2.29
5641 7266 7.436118 AGCTTCATAGTTCATTTTTGCAGAAA 58.564 30.769 4.71 4.71 0.00 2.52
5642 7267 6.985117 AGCTTCATAGTTCATTTTTGCAGAA 58.015 32.000 0.00 0.00 0.00 3.02
5643 7268 6.579666 AGCTTCATAGTTCATTTTTGCAGA 57.420 33.333 0.00 0.00 0.00 4.26
5644 7269 6.971184 CCTAGCTTCATAGTTCATTTTTGCAG 59.029 38.462 0.00 0.00 0.00 4.41
5645 7270 6.625740 GCCTAGCTTCATAGTTCATTTTTGCA 60.626 38.462 0.00 0.00 0.00 4.08
5646 7271 5.745769 GCCTAGCTTCATAGTTCATTTTTGC 59.254 40.000 0.00 0.00 0.00 3.68
5647 7272 6.855836 TGCCTAGCTTCATAGTTCATTTTTG 58.144 36.000 0.00 0.00 0.00 2.44
5648 7273 7.315890 GTTGCCTAGCTTCATAGTTCATTTTT 58.684 34.615 0.00 0.00 0.00 1.94
5649 7274 6.403636 CGTTGCCTAGCTTCATAGTTCATTTT 60.404 38.462 0.00 0.00 0.00 1.82
5650 7275 5.065218 CGTTGCCTAGCTTCATAGTTCATTT 59.935 40.000 0.00 0.00 0.00 2.32
5651 7276 4.572389 CGTTGCCTAGCTTCATAGTTCATT 59.428 41.667 0.00 0.00 0.00 2.57
5652 7277 4.122776 CGTTGCCTAGCTTCATAGTTCAT 58.877 43.478 0.00 0.00 0.00 2.57
5653 7278 3.521560 CGTTGCCTAGCTTCATAGTTCA 58.478 45.455 0.00 0.00 0.00 3.18
5654 7279 2.285488 GCGTTGCCTAGCTTCATAGTTC 59.715 50.000 0.00 0.00 0.00 3.01
5655 7280 2.093447 AGCGTTGCCTAGCTTCATAGTT 60.093 45.455 0.00 0.00 41.52 2.24
5656 7281 1.482593 AGCGTTGCCTAGCTTCATAGT 59.517 47.619 0.00 0.00 41.52 2.12
5657 7282 2.231215 AGCGTTGCCTAGCTTCATAG 57.769 50.000 0.00 0.00 41.52 2.23
5658 7283 3.812156 TTAGCGTTGCCTAGCTTCATA 57.188 42.857 0.00 0.00 44.15 2.15
5659 7284 2.691409 TTAGCGTTGCCTAGCTTCAT 57.309 45.000 0.00 0.00 44.15 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.