Multiple sequence alignment - TraesCS3B01G421500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G421500 chr3B 100.000 3427 0 0 1 3427 658488939 658492365 0.000000e+00 6329.0
1 TraesCS3B01G421500 chr3B 85.327 1254 144 29 824 2059 756687003 756685772 0.000000e+00 1260.0
2 TraesCS3B01G421500 chr3B 88.401 638 59 7 1309 1945 684765207 684765830 0.000000e+00 754.0
3 TraesCS3B01G421500 chr3B 85.581 534 57 13 728 1249 684764681 684765206 3.010000e-150 542.0
4 TraesCS3B01G421500 chr3B 82.841 542 68 10 2104 2644 684765831 684766348 2.410000e-126 462.0
5 TraesCS3B01G421500 chr3B 83.202 381 62 2 2059 2438 756685744 756685365 7.040000e-92 348.0
6 TraesCS3B01G421500 chr3B 99.408 169 1 0 2733 2901 246304018 246303850 1.190000e-79 307.0
7 TraesCS3B01G421500 chr3B 73.888 697 168 12 1251 1941 756823929 756823241 2.030000e-67 267.0
8 TraesCS3B01G421500 chr3B 73.458 697 170 13 1251 1941 756708797 756708110 7.340000e-62 248.0
9 TraesCS3B01G421500 chr3B 88.321 137 11 2 3295 3427 659067860 659067995 3.540000e-35 159.0
10 TraesCS3B01G421500 chr3B 82.353 136 23 1 2071 2206 684763764 684763898 2.160000e-22 117.0
11 TraesCS3B01G421500 chr3D 92.605 2015 132 10 727 2738 497867326 497869326 0.000000e+00 2880.0
12 TraesCS3B01G421500 chr3D 93.665 221 11 2 396 613 497867108 497867328 9.170000e-86 327.0
13 TraesCS3B01G421500 chr3D 78.476 525 55 27 111 579 520320640 520320118 1.200000e-74 291.0
14 TraesCS3B01G421500 chr3D 94.574 129 5 1 612 738 445035250 445035122 7.500000e-47 198.0
15 TraesCS3B01G421500 chr3D 84.559 136 21 0 2071 2206 520321496 520321361 5.970000e-28 135.0
16 TraesCS3B01G421500 chr3D 82.707 133 23 0 2071 2203 497866384 497866516 6.010000e-23 119.0
17 TraesCS3B01G421500 chr3D 86.957 92 12 0 993 1084 520319252 520319161 1.680000e-18 104.0
18 TraesCS3B01G421500 chr3A 94.212 1313 66 8 727 2031 636538917 636537607 0.000000e+00 1995.0
19 TraesCS3B01G421500 chr3A 81.913 1725 259 28 736 2438 702953067 702951374 0.000000e+00 1408.0
20 TraesCS3B01G421500 chr3A 85.052 863 110 12 1180 2030 702589758 702588903 0.000000e+00 861.0
21 TraesCS3B01G421500 chr3A 92.740 551 40 0 2017 2567 636537522 636536972 0.000000e+00 797.0
22 TraesCS3B01G421500 chr3A 87.167 639 55 13 1309 1945 655894625 655894012 0.000000e+00 701.0
23 TraesCS3B01G421500 chr3A 85.206 534 52 15 729 1249 655895145 655894626 1.090000e-144 523.0
24 TraesCS3B01G421500 chr3A 81.139 509 41 21 2927 3412 636536824 636536348 1.170000e-94 357.0
25 TraesCS3B01G421500 chr3A 84.776 335 29 7 2104 2438 655894011 655893699 1.980000e-82 316.0
26 TraesCS3B01G421500 chr3A 78.637 543 63 29 111 613 636539444 636538915 9.240000e-81 311.0
27 TraesCS3B01G421500 chr3A 90.551 127 7 2 2612 2738 636536960 636536839 2.740000e-36 163.0
28 TraesCS3B01G421500 chr3A 84.559 136 21 0 2071 2206 655629860 655629995 5.970000e-28 135.0
29 TraesCS3B01G421500 chr3A 77.459 244 37 12 1414 1641 702947320 702947079 2.780000e-26 130.0
30 TraesCS3B01G421500 chr3A 86.957 92 12 0 993 1084 655886618 655886527 1.680000e-18 104.0
31 TraesCS3B01G421500 chr3A 86.458 96 12 1 1089 1184 702594477 702594383 1.680000e-18 104.0
32 TraesCS3B01G421500 chr3A 93.220 59 3 1 3295 3353 636394771 636394714 6.090000e-13 86.1
33 TraesCS3B01G421500 chr3A 100.000 31 0 0 2585 2615 636536959 636536989 1.330000e-04 58.4
34 TraesCS3B01G421500 chr5A 73.267 1616 345 55 870 2427 401317780 401316194 8.480000e-141 510.0
35 TraesCS3B01G421500 chr5D 72.941 1615 344 62 870 2427 297736755 297738333 3.090000e-130 475.0
36 TraesCS3B01G421500 chr2A 99.405 168 1 0 2737 2904 495825461 495825628 4.300000e-79 305.0
37 TraesCS3B01G421500 chr2A 95.109 184 7 2 2737 2920 15754451 15754270 4.330000e-74 289.0
38 TraesCS3B01G421500 chr2A 96.694 121 4 0 611 731 78845690 78845570 5.800000e-48 202.0
39 TraesCS3B01G421500 chr1B 99.401 167 1 0 2736 2902 603523063 603523229 1.550000e-78 303.0
40 TraesCS3B01G421500 chr7A 98.817 169 2 0 2734 2902 243666293 243666461 5.560000e-78 302.0
41 TraesCS3B01G421500 chr7A 96.721 122 4 0 612 733 721098233 721098354 1.610000e-48 204.0
42 TraesCS3B01G421500 chr7A 96.552 87 3 0 28 114 184126738 184126824 9.910000e-31 145.0
43 TraesCS3B01G421500 chr5B 97.727 176 2 2 2735 2910 10341750 10341577 5.560000e-78 302.0
44 TraesCS3B01G421500 chr5B 91.324 219 12 7 2731 2945 595152689 595152904 3.350000e-75 292.0
45 TraesCS3B01G421500 chr5B 74.887 665 144 19 893 1543 338481164 338481819 7.240000e-72 281.0
46 TraesCS3B01G421500 chr1A 98.817 169 2 0 2733 2901 22826723 22826555 5.560000e-78 302.0
47 TraesCS3B01G421500 chr1A 96.694 121 3 1 611 731 459516906 459516787 2.090000e-47 200.0
48 TraesCS3B01G421500 chr1A 95.238 126 6 0 612 737 498452668 498452793 2.090000e-47 200.0
49 TraesCS3B01G421500 chrUn 96.133 181 6 1 2729 2909 23690787 23690966 9.300000e-76 294.0
50 TraesCS3B01G421500 chr7B 97.541 122 3 0 612 733 589467159 589467038 3.470000e-50 209.0
51 TraesCS3B01G421500 chr2B 96.667 120 4 0 612 731 518048325 518048444 2.090000e-47 200.0
52 TraesCS3B01G421500 chr2D 94.531 128 5 2 612 738 109700466 109700340 2.700000e-46 196.0
53 TraesCS3B01G421500 chr2D 93.617 94 6 0 29 122 307490171 307490078 1.280000e-29 141.0
54 TraesCS3B01G421500 chr6A 95.833 120 5 0 611 730 168121045 168120926 9.700000e-46 195.0
55 TraesCS3B01G421500 chr6A 94.565 92 5 0 28 119 121888017 121887926 3.560000e-30 143.0
56 TraesCS3B01G421500 chr6A 94.565 92 5 0 26 117 121887928 121888019 3.560000e-30 143.0
57 TraesCS3B01G421500 chr4D 95.556 90 4 0 28 117 383775650 383775561 9.910000e-31 145.0
58 TraesCS3B01G421500 chr4B 95.556 90 4 0 29 118 432817292 432817381 9.910000e-31 145.0
59 TraesCS3B01G421500 chr4A 95.556 90 4 0 29 118 570916238 570916149 9.910000e-31 145.0
60 TraesCS3B01G421500 chr4A 95.556 90 4 0 29 118 619281527 619281438 9.910000e-31 145.0
61 TraesCS3B01G421500 chr7D 93.617 94 6 0 26 119 81910951 81911044 1.280000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G421500 chr3B 658488939 658492365 3426 False 6329.000000 6329 100.000000 1 3427 1 chr3B.!!$F1 3426
1 TraesCS3B01G421500 chr3B 756685365 756687003 1638 True 804.000000 1260 84.264500 824 2438 2 chr3B.!!$R4 1614
2 TraesCS3B01G421500 chr3B 684763764 684766348 2584 False 468.750000 754 84.794000 728 2644 4 chr3B.!!$F3 1916
3 TraesCS3B01G421500 chr3B 756823241 756823929 688 True 267.000000 267 73.888000 1251 1941 1 chr3B.!!$R3 690
4 TraesCS3B01G421500 chr3B 756708110 756708797 687 True 248.000000 248 73.458000 1251 1941 1 chr3B.!!$R2 690
5 TraesCS3B01G421500 chr3D 497866384 497869326 2942 False 1108.666667 2880 89.659000 396 2738 3 chr3D.!!$F1 2342
6 TraesCS3B01G421500 chr3A 702951374 702953067 1693 True 1408.000000 1408 81.913000 736 2438 1 chr3A.!!$R6 1702
7 TraesCS3B01G421500 chr3A 702588903 702589758 855 True 861.000000 861 85.052000 1180 2030 1 chr3A.!!$R3 850
8 TraesCS3B01G421500 chr3A 636536348 636539444 3096 True 724.600000 1995 87.455800 111 3412 5 chr3A.!!$R7 3301
9 TraesCS3B01G421500 chr3A 655893699 655895145 1446 True 513.333333 701 85.716333 729 2438 3 chr3A.!!$R8 1709
10 TraesCS3B01G421500 chr5A 401316194 401317780 1586 True 510.000000 510 73.267000 870 2427 1 chr5A.!!$R1 1557
11 TraesCS3B01G421500 chr5D 297736755 297738333 1578 False 475.000000 475 72.941000 870 2427 1 chr5D.!!$F1 1557
12 TraesCS3B01G421500 chr5B 338481164 338481819 655 False 281.000000 281 74.887000 893 1543 1 chr5B.!!$F1 650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
727 1084 0.034476 GTTTTTCGGACGGAGGGAGT 59.966 55.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2439 3012 0.248843 AGACTAGCAGCAGCAACTCC 59.751 55.0 3.17 0.0 45.49 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.997746 TGAAAAACACAATAGGACTCCTCAG 59.002 40.000 0.00 0.00 34.61 3.35
25 26 5.568620 AAAACACAATAGGACTCCTCAGT 57.431 39.130 0.00 0.00 34.61 3.41
26 27 6.681729 AAAACACAATAGGACTCCTCAGTA 57.318 37.500 0.00 0.00 34.61 2.74
27 28 5.923733 AACACAATAGGACTCCTCAGTAG 57.076 43.478 0.00 0.00 34.61 2.57
29 30 6.075949 ACACAATAGGACTCCTCAGTAGTA 57.924 41.667 0.00 0.00 34.61 1.82
30 31 5.887035 ACACAATAGGACTCCTCAGTAGTAC 59.113 44.000 0.00 0.00 34.61 2.73
32 33 6.261381 CACAATAGGACTCCTCAGTAGTACTC 59.739 46.154 0.00 0.00 39.02 2.59
36 37 3.434024 GGACTCCTCAGTAGTACTCCCTC 60.434 56.522 0.00 0.00 30.63 4.30
38 39 3.201266 ACTCCTCAGTAGTACTCCCTCTG 59.799 52.174 0.00 4.92 0.00 3.35
40 41 3.200385 TCCTCAGTAGTACTCCCTCTGTC 59.800 52.174 0.00 0.00 0.00 3.51
41 42 3.547746 CTCAGTAGTACTCCCTCTGTCC 58.452 54.545 0.00 0.00 0.00 4.02
42 43 2.241685 TCAGTAGTACTCCCTCTGTCCC 59.758 54.545 0.00 0.00 0.00 4.46
43 44 2.025226 CAGTAGTACTCCCTCTGTCCCA 60.025 54.545 0.00 0.00 0.00 4.37
44 45 2.653366 AGTAGTACTCCCTCTGTCCCAA 59.347 50.000 0.00 0.00 0.00 4.12
45 46 2.715763 AGTACTCCCTCTGTCCCAAA 57.284 50.000 0.00 0.00 0.00 3.28
47 48 3.532102 AGTACTCCCTCTGTCCCAAAAT 58.468 45.455 0.00 0.00 0.00 1.82
48 49 4.695606 AGTACTCCCTCTGTCCCAAAATA 58.304 43.478 0.00 0.00 0.00 1.40
49 50 5.098663 AGTACTCCCTCTGTCCCAAAATAA 58.901 41.667 0.00 0.00 0.00 1.40
52 53 4.263506 ACTCCCTCTGTCCCAAAATAAGTG 60.264 45.833 0.00 0.00 0.00 3.16
53 54 3.913799 TCCCTCTGTCCCAAAATAAGTGA 59.086 43.478 0.00 0.00 0.00 3.41
54 55 4.010349 CCCTCTGTCCCAAAATAAGTGAC 58.990 47.826 0.00 0.00 0.00 3.67
55 56 4.263506 CCCTCTGTCCCAAAATAAGTGACT 60.264 45.833 0.00 0.00 0.00 3.41
57 58 5.513094 CCTCTGTCCCAAAATAAGTGACTCA 60.513 44.000 0.00 0.00 0.00 3.41
58 59 5.935945 TCTGTCCCAAAATAAGTGACTCAA 58.064 37.500 0.00 0.00 0.00 3.02
59 60 5.763204 TCTGTCCCAAAATAAGTGACTCAAC 59.237 40.000 0.00 0.00 0.00 3.18
61 62 6.126409 TGTCCCAAAATAAGTGACTCAACTT 58.874 36.000 0.00 0.00 42.89 2.66
63 64 6.918022 GTCCCAAAATAAGTGACTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
64 65 6.605594 TCCCAAAATAAGTGACTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
66 67 7.860872 CCCAAAATAAGTGACTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
67 68 8.621286 CCAAAATAAGTGACTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
102 103 8.934023 ATAAAGTTGAGTCACTTATTTTGGGA 57.066 30.769 0.00 0.00 35.87 4.37
103 104 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
104 105 4.755123 AGTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
105 106 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
107 108 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
108 109 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
109 110 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
167 177 1.068055 CATCAGCCAAAACTGCCAGAC 60.068 52.381 0.00 0.00 37.59 3.51
175 185 1.045407 AAACTGCCAGACCGTCAGTA 58.955 50.000 0.00 0.00 39.86 2.74
189 199 3.181489 CCGTCAGTAATAGGTCAGTCCAC 60.181 52.174 0.00 0.00 39.02 4.02
201 211 1.171308 CAGTCCACCAGAGGCATTTG 58.829 55.000 0.00 0.00 0.00 2.32
204 214 0.038166 TCCACCAGAGGCATTTGACC 59.962 55.000 0.00 0.00 0.00 4.02
205 215 1.308069 CCACCAGAGGCATTTGACCG 61.308 60.000 0.00 0.00 0.00 4.79
206 216 0.321564 CACCAGAGGCATTTGACCGA 60.322 55.000 0.00 0.00 0.00 4.69
237 250 4.655963 ACAATATGTGAGCACTCCAGTTT 58.344 39.130 1.99 0.00 0.00 2.66
238 251 5.804639 ACAATATGTGAGCACTCCAGTTTA 58.195 37.500 1.99 0.00 0.00 2.01
240 253 6.886459 ACAATATGTGAGCACTCCAGTTTATT 59.114 34.615 1.99 0.00 0.00 1.40
241 254 6.932356 ATATGTGAGCACTCCAGTTTATTG 57.068 37.500 1.99 0.00 0.00 1.90
242 255 4.085357 TGTGAGCACTCCAGTTTATTGT 57.915 40.909 1.99 0.00 0.00 2.71
245 258 4.757149 GTGAGCACTCCAGTTTATTGTTCT 59.243 41.667 0.00 0.00 0.00 3.01
248 261 7.119846 GTGAGCACTCCAGTTTATTGTTCTTAT 59.880 37.037 0.00 0.00 0.00 1.73
250 263 8.409358 AGCACTCCAGTTTATTGTTCTTATTT 57.591 30.769 0.00 0.00 0.00 1.40
251 264 9.515226 AGCACTCCAGTTTATTGTTCTTATTTA 57.485 29.630 0.00 0.00 0.00 1.40
289 302 8.402472 GGTGCTTGTGTTAATGCTAATATTGTA 58.598 33.333 0.00 0.00 0.00 2.41
344 357 9.606631 ACTGGAAATTCAGTTAGTATCTGATTC 57.393 33.333 10.95 11.77 44.74 2.52
377 390 6.914259 GCTAGAAGAGCCAACAAAATTTAGT 58.086 36.000 0.00 0.00 46.41 2.24
378 391 7.371159 GCTAGAAGAGCCAACAAAATTTAGTT 58.629 34.615 0.00 0.00 46.41 2.24
466 820 1.740025 CAAGTTGCTGGCCTTAGTAGC 59.260 52.381 3.32 4.36 37.93 3.58
472 826 1.139853 GCTGGCCTTAGTAGCAGTGAT 59.860 52.381 3.32 0.00 37.40 3.06
481 835 7.310113 GGCCTTAGTAGCAGTGATAGATAACAT 60.310 40.741 0.00 0.00 0.00 2.71
537 894 2.360475 GCAGCCAGAACAGTCCCC 60.360 66.667 0.00 0.00 0.00 4.81
613 970 5.585047 CCTCAAAATAACAGGTAGCTGGTAC 59.415 44.000 21.40 8.46 28.31 3.34
614 971 6.368779 TCAAAATAACAGGTAGCTGGTACT 57.631 37.500 21.40 8.62 28.31 2.73
615 972 6.403878 TCAAAATAACAGGTAGCTGGTACTC 58.596 40.000 21.40 7.08 28.31 2.59
616 973 5.354842 AAATAACAGGTAGCTGGTACTCC 57.645 43.478 21.40 1.55 28.31 3.85
617 974 1.569653 AACAGGTAGCTGGTACTCCC 58.430 55.000 24.84 0.86 0.00 4.30
618 975 0.711184 ACAGGTAGCTGGTACTCCCT 59.289 55.000 24.84 3.16 0.00 4.20
619 976 1.342175 ACAGGTAGCTGGTACTCCCTC 60.342 57.143 24.84 0.27 0.00 4.30
620 977 0.262285 AGGTAGCTGGTACTCCCTCC 59.738 60.000 15.74 0.00 0.00 4.30
621 978 1.108132 GGTAGCTGGTACTCCCTCCG 61.108 65.000 15.74 0.00 0.00 4.63
622 979 0.395448 GTAGCTGGTACTCCCTCCGT 60.395 60.000 9.64 0.00 0.00 4.69
623 980 0.106819 TAGCTGGTACTCCCTCCGTC 60.107 60.000 0.00 0.00 0.00 4.79
624 981 2.424733 GCTGGTACTCCCTCCGTCC 61.425 68.421 0.00 0.00 0.00 4.79
625 982 2.044650 TGGTACTCCCTCCGTCCG 60.045 66.667 0.00 0.00 0.00 4.79
626 983 2.273449 GGTACTCCCTCCGTCCGA 59.727 66.667 0.00 0.00 0.00 4.55
627 984 1.379044 GGTACTCCCTCCGTCCGAA 60.379 63.158 0.00 0.00 0.00 4.30
628 985 0.967380 GGTACTCCCTCCGTCCGAAA 60.967 60.000 0.00 0.00 0.00 3.46
629 986 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
630 987 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
631 988 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
632 989 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
633 990 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
634 991 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
635 992 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
636 993 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
637 994 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
638 995 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
639 996 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
640 997 1.314730 GTCCGAAAAAGCTTGTCCCA 58.685 50.000 0.00 0.00 0.00 4.37
641 998 1.679153 GTCCGAAAAAGCTTGTCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
642 999 1.953686 TCCGAAAAAGCTTGTCCCAAG 59.046 47.619 0.00 0.00 0.00 3.61
643 1000 1.602920 CCGAAAAAGCTTGTCCCAAGC 60.603 52.381 18.69 18.69 43.31 4.01
649 1006 1.576421 GCTTGTCCCAAGCTTGTCG 59.424 57.895 24.35 14.17 40.01 4.35
650 1007 1.576421 CTTGTCCCAAGCTTGTCGC 59.424 57.895 24.35 13.72 39.57 5.19
661 1018 2.184385 GCTTGTCGCTCAAATGGATG 57.816 50.000 0.00 0.00 35.48 3.51
662 1019 1.470098 GCTTGTCGCTCAAATGGATGT 59.530 47.619 0.00 0.00 35.48 3.06
663 1020 2.677836 GCTTGTCGCTCAAATGGATGTA 59.322 45.455 0.00 0.00 35.48 2.29
664 1021 3.313526 GCTTGTCGCTCAAATGGATGTAT 59.686 43.478 0.00 0.00 35.48 2.29
665 1022 4.553547 GCTTGTCGCTCAAATGGATGTATC 60.554 45.833 0.00 0.00 35.48 2.24
666 1023 4.406648 TGTCGCTCAAATGGATGTATCT 57.593 40.909 0.00 0.00 0.00 1.98
667 1024 5.529581 TGTCGCTCAAATGGATGTATCTA 57.470 39.130 0.00 0.00 0.00 1.98
668 1025 5.532557 TGTCGCTCAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 0.00 2.43
669 1026 4.387256 GTCGCTCAAATGGATGTATCTAGC 59.613 45.833 0.00 0.00 0.00 3.42
670 1027 4.039124 TCGCTCAAATGGATGTATCTAGCA 59.961 41.667 0.00 0.00 0.00 3.49
671 1028 4.151335 CGCTCAAATGGATGTATCTAGCAC 59.849 45.833 0.00 0.00 0.00 4.40
672 1029 5.303971 GCTCAAATGGATGTATCTAGCACT 58.696 41.667 0.00 0.00 0.00 4.40
673 1030 6.459066 GCTCAAATGGATGTATCTAGCACTA 58.541 40.000 0.00 0.00 0.00 2.74
674 1031 6.931281 GCTCAAATGGATGTATCTAGCACTAA 59.069 38.462 0.00 0.00 0.00 2.24
675 1032 7.095439 GCTCAAATGGATGTATCTAGCACTAAC 60.095 40.741 0.00 0.00 0.00 2.34
676 1033 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
677 1034 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
678 1035 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
679 1036 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
680 1037 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
681 1038 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
693 1050 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
694 1051 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
695 1052 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
696 1053 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
697 1054 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
698 1055 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
699 1056 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
700 1057 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
701 1058 4.999950 GGTGCTAGATACATCCATTTGAGG 59.000 45.833 0.00 0.00 0.00 3.86
702 1059 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
703 1060 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
704 1061 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
705 1062 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
706 1063 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
707 1064 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
708 1065 3.091633 ACATCCATTTGAGGGACAAGG 57.908 47.619 0.00 0.00 39.77 3.61
709 1066 2.379907 ACATCCATTTGAGGGACAAGGT 59.620 45.455 0.00 0.00 39.77 3.50
710 1067 3.181418 ACATCCATTTGAGGGACAAGGTT 60.181 43.478 0.00 0.00 39.77 3.50
711 1068 3.611025 TCCATTTGAGGGACAAGGTTT 57.389 42.857 0.00 0.00 39.77 3.27
712 1069 3.922375 TCCATTTGAGGGACAAGGTTTT 58.078 40.909 0.00 0.00 39.77 2.43
713 1070 4.294347 TCCATTTGAGGGACAAGGTTTTT 58.706 39.130 0.00 0.00 39.77 1.94
714 1071 4.343814 TCCATTTGAGGGACAAGGTTTTTC 59.656 41.667 0.00 0.00 39.77 2.29
715 1072 4.298332 CATTTGAGGGACAAGGTTTTTCG 58.702 43.478 0.00 0.00 39.77 3.46
716 1073 1.975660 TGAGGGACAAGGTTTTTCGG 58.024 50.000 0.00 0.00 0.00 4.30
717 1074 1.491332 TGAGGGACAAGGTTTTTCGGA 59.509 47.619 0.00 0.00 0.00 4.55
718 1075 1.878088 GAGGGACAAGGTTTTTCGGAC 59.122 52.381 0.00 0.00 0.00 4.79
719 1076 0.589708 GGGACAAGGTTTTTCGGACG 59.410 55.000 0.00 0.00 0.00 4.79
720 1077 0.589708 GGACAAGGTTTTTCGGACGG 59.410 55.000 0.00 0.00 0.00 4.79
721 1078 1.585297 GACAAGGTTTTTCGGACGGA 58.415 50.000 0.00 0.00 0.00 4.69
722 1079 1.529865 GACAAGGTTTTTCGGACGGAG 59.470 52.381 0.00 0.00 0.00 4.63
723 1080 0.872388 CAAGGTTTTTCGGACGGAGG 59.128 55.000 0.00 0.00 0.00 4.30
724 1081 0.250597 AAGGTTTTTCGGACGGAGGG 60.251 55.000 0.00 0.00 0.00 4.30
725 1082 1.123246 AGGTTTTTCGGACGGAGGGA 61.123 55.000 0.00 0.00 0.00 4.20
726 1083 0.672711 GGTTTTTCGGACGGAGGGAG 60.673 60.000 0.00 0.00 0.00 4.30
727 1084 0.034476 GTTTTTCGGACGGAGGGAGT 59.966 55.000 0.00 0.00 0.00 3.85
789 1151 3.541242 ATCCTGATTTGGGTTTGACCA 57.459 42.857 0.00 0.00 41.02 4.02
863 1229 1.624813 ACCCATTTGCTTCACCCAATG 59.375 47.619 0.00 0.00 0.00 2.82
934 1309 2.233922 ACTTCCGGTACATCTTCACCAG 59.766 50.000 0.00 0.00 34.25 4.00
991 1372 1.451028 GAGGTTAGCCCTGCTGCAG 60.451 63.158 22.44 22.44 46.51 4.41
1084 1469 7.996644 ACAACTCCAGTTTTCAGGTAATTTCTA 59.003 33.333 0.00 0.00 35.83 2.10
1138 1529 2.224548 CGGTCCCTTCTCCTGAAACTTT 60.225 50.000 0.00 0.00 0.00 2.66
1152 1543 3.632145 TGAAACTTTGGCTTCTGAAGACC 59.368 43.478 20.10 18.97 34.86 3.85
1171 1562 3.600388 ACCGTCTCATCAGGAATTTGTC 58.400 45.455 0.00 0.00 0.00 3.18
1307 1719 0.694771 AGCAGAACAGGATGAAGCCA 59.305 50.000 0.00 0.00 39.69 4.75
1316 1728 3.972638 ACAGGATGAAGCCACTGATAGAT 59.027 43.478 0.00 0.00 39.69 1.98
1457 1869 2.032681 ACCCGCAGCCACTTTCTC 59.967 61.111 0.00 0.00 0.00 2.87
1584 2001 3.305813 CGAGCCTCTTGTTGTAACTGGTA 60.306 47.826 0.00 0.00 0.00 3.25
1679 2097 3.282021 TCATTGGCTCTCAAAGGTATGC 58.718 45.455 0.00 0.00 39.05 3.14
1883 2316 2.475371 TTTCCTGCAGCTGAGAGGCC 62.475 60.000 20.43 0.00 0.00 5.19
1957 2390 3.063084 GAGCCCGTCACCGAGAGT 61.063 66.667 0.00 0.00 35.63 3.24
2090 2651 3.189287 GCTAACAGGGTGTGATTGACAAG 59.811 47.826 0.00 0.00 35.91 3.16
2095 2656 3.254166 CAGGGTGTGATTGACAAGGAAAG 59.746 47.826 0.00 0.00 35.91 2.62
2181 2742 3.591079 AGAAGAGGGCTCCTTTTCAATCT 59.409 43.478 19.69 3.77 44.22 2.40
2183 2744 3.188773 AGAGGGCTCCTTTTCAATCTCT 58.811 45.455 0.00 0.00 31.76 3.10
2318 2891 0.033228 CGCCAGGAGAGATCATGGAC 59.967 60.000 12.77 3.76 34.60 4.02
2372 2945 2.546494 GCAGCGCAGGTCACAAGTT 61.546 57.895 11.47 0.00 33.74 2.66
2439 3012 4.421058 CAAGGCATGACATGACAATTGAG 58.579 43.478 23.23 2.60 42.15 3.02
2441 3014 3.018856 GGCATGACATGACAATTGAGGA 58.981 45.455 19.76 0.00 38.49 3.71
2465 3038 1.601663 GCTGCTGCTAGTCTGTATCCG 60.602 57.143 8.53 0.00 36.03 4.18
2497 3070 9.985730 AATTTGTGACATGTCTGTAAAATTCAT 57.014 25.926 25.55 9.19 35.14 2.57
2502 3075 7.912250 GTGACATGTCTGTAAAATTCATCATCC 59.088 37.037 25.55 0.00 35.14 3.51
2516 3089 9.573166 AAATTCATCATCCAACTTAATCGGATA 57.427 29.630 0.00 0.00 37.44 2.59
2526 3099 6.865726 CCAACTTAATCGGATATGTGAGAGAG 59.134 42.308 0.00 0.00 0.00 3.20
2530 3103 5.720371 AATCGGATATGTGAGAGAGGAAG 57.280 43.478 0.00 0.00 0.00 3.46
2534 3107 4.558496 CGGATATGTGAGAGAGGAAGAAGC 60.558 50.000 0.00 0.00 0.00 3.86
2559 3132 6.018262 CCAAATATCTGCTGAAATTGCATTGG 60.018 38.462 0.00 0.00 38.41 3.16
2569 3142 0.742505 ATTGCATTGGGAGACATGCG 59.257 50.000 0.00 0.00 42.48 4.73
2573 3146 0.379669 CATTGGGAGACATGCGCTTC 59.620 55.000 9.73 2.13 0.00 3.86
2577 3150 0.529555 GGGAGACATGCGCTTCTCTC 60.530 60.000 24.12 20.84 38.68 3.20
2579 3152 1.535860 GGAGACATGCGCTTCTCTCTC 60.536 57.143 21.90 16.34 38.68 3.20
2582 3155 2.233431 AGACATGCGCTTCTCTCTCTTT 59.767 45.455 9.73 0.00 0.00 2.52
2651 3224 6.237901 AGTTCTGCAAAGGTACATACATGAA 58.762 36.000 0.00 0.00 0.00 2.57
2652 3225 6.714810 AGTTCTGCAAAGGTACATACATGAAA 59.285 34.615 0.00 0.00 0.00 2.69
2653 3226 7.394359 AGTTCTGCAAAGGTACATACATGAAAT 59.606 33.333 0.00 0.00 0.00 2.17
2694 3267 6.040054 TGTTCCATGGCAATCTCATAAGAATG 59.960 38.462 6.96 0.00 35.81 2.67
2708 3281 7.365497 TCATAAGAATGAGTTATGCTCTCCA 57.635 36.000 0.00 0.00 44.41 3.86
2713 3286 1.833630 TGAGTTATGCTCTCCACTGGG 59.166 52.381 0.00 0.00 44.41 4.45
2738 3311 3.222173 TCTCTCCTGGCTCTCATCTAC 57.778 52.381 0.00 0.00 0.00 2.59
2739 3312 2.782925 TCTCTCCTGGCTCTCATCTACT 59.217 50.000 0.00 0.00 0.00 2.57
2740 3313 3.149196 CTCTCCTGGCTCTCATCTACTC 58.851 54.545 0.00 0.00 0.00 2.59
2741 3314 2.158534 TCTCCTGGCTCTCATCTACTCC 60.159 54.545 0.00 0.00 0.00 3.85
2742 3315 1.133325 TCCTGGCTCTCATCTACTCCC 60.133 57.143 0.00 0.00 0.00 4.30
2743 3316 1.133199 CCTGGCTCTCATCTACTCCCT 60.133 57.143 0.00 0.00 0.00 4.20
2744 3317 2.238521 CTGGCTCTCATCTACTCCCTC 58.761 57.143 0.00 0.00 0.00 4.30
2745 3318 1.133325 TGGCTCTCATCTACTCCCTCC 60.133 57.143 0.00 0.00 0.00 4.30
2746 3319 1.243902 GCTCTCATCTACTCCCTCCG 58.756 60.000 0.00 0.00 0.00 4.63
2747 3320 1.477923 GCTCTCATCTACTCCCTCCGT 60.478 57.143 0.00 0.00 0.00 4.69
2748 3321 2.938838 CTCTCATCTACTCCCTCCGTT 58.061 52.381 0.00 0.00 0.00 4.44
2749 3322 2.882137 CTCTCATCTACTCCCTCCGTTC 59.118 54.545 0.00 0.00 0.00 3.95
2750 3323 1.957877 CTCATCTACTCCCTCCGTTCC 59.042 57.143 0.00 0.00 0.00 3.62
2751 3324 1.569548 TCATCTACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36
2752 3325 2.781757 TCATCTACTCCCTCCGTTCCTA 59.218 50.000 0.00 0.00 0.00 2.94
2753 3326 3.203710 TCATCTACTCCCTCCGTTCCTAA 59.796 47.826 0.00 0.00 0.00 2.69
2754 3327 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
2755 3328 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
2756 3329 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
2757 3330 5.769835 TCTACTCCCTCCGTTCCTAAATAA 58.230 41.667 0.00 0.00 0.00 1.40
2758 3331 6.379579 TCTACTCCCTCCGTTCCTAAATAAT 58.620 40.000 0.00 0.00 0.00 1.28
2759 3332 5.970501 ACTCCCTCCGTTCCTAAATAATT 57.029 39.130 0.00 0.00 0.00 1.40
2760 3333 5.681639 ACTCCCTCCGTTCCTAAATAATTG 58.318 41.667 0.00 0.00 0.00 2.32
2761 3334 5.191124 ACTCCCTCCGTTCCTAAATAATTGT 59.809 40.000 0.00 0.00 0.00 2.71
2762 3335 5.677567 TCCCTCCGTTCCTAAATAATTGTC 58.322 41.667 0.00 0.00 0.00 3.18
2763 3336 5.427481 TCCCTCCGTTCCTAAATAATTGTCT 59.573 40.000 0.00 0.00 0.00 3.41
2764 3337 6.069847 TCCCTCCGTTCCTAAATAATTGTCTT 60.070 38.462 0.00 0.00 0.00 3.01
2765 3338 6.602009 CCCTCCGTTCCTAAATAATTGTCTTT 59.398 38.462 0.00 0.00 0.00 2.52
2766 3339 7.201705 CCCTCCGTTCCTAAATAATTGTCTTTC 60.202 40.741 0.00 0.00 0.00 2.62
2767 3340 7.553044 CCTCCGTTCCTAAATAATTGTCTTTCT 59.447 37.037 0.00 0.00 0.00 2.52
2768 3341 9.595823 CTCCGTTCCTAAATAATTGTCTTTCTA 57.404 33.333 0.00 0.00 0.00 2.10
2769 3342 9.595823 TCCGTTCCTAAATAATTGTCTTTCTAG 57.404 33.333 0.00 0.00 0.00 2.43
2770 3343 9.595823 CCGTTCCTAAATAATTGTCTTTCTAGA 57.404 33.333 0.00 0.00 0.00 2.43
2783 3356 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2784 3357 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2785 3358 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2786 3359 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2787 3360 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2788 3361 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2789 3362 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2790 3363 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2791 3364 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2793 3366 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2794 3367 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
2795 3368 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
2796 3369 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2797 3370 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2798 3371 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2799 3372 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2800 3373 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2801 3374 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2802 3375 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2803 3376 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2804 3377 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2805 3378 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2806 3379 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2807 3380 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2808 3381 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2809 3382 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2810 3383 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2811 3384 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2812 3385 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2813 3386 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2814 3387 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2815 3388 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2816 3389 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2817 3390 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2830 3403 8.764524 AGTGAATCTACACTCTAAAACATGTC 57.235 34.615 0.00 0.00 46.36 3.06
2831 3404 8.589338 AGTGAATCTACACTCTAAAACATGTCT 58.411 33.333 0.00 0.00 46.36 3.41
2832 3405 9.856488 GTGAATCTACACTCTAAAACATGTCTA 57.144 33.333 0.00 0.00 37.73 2.59
2833 3406 9.856488 TGAATCTACACTCTAAAACATGTCTAC 57.144 33.333 0.00 0.00 0.00 2.59
2834 3407 9.856488 GAATCTACACTCTAAAACATGTCTACA 57.144 33.333 0.00 0.00 0.00 2.74
2840 3413 9.587772 ACACTCTAAAACATGTCTACATACATC 57.412 33.333 0.00 0.00 38.01 3.06
2841 3414 9.035607 CACTCTAAAACATGTCTACATACATCC 57.964 37.037 0.00 0.00 38.01 3.51
2842 3415 7.921214 ACTCTAAAACATGTCTACATACATCCG 59.079 37.037 0.00 0.00 38.01 4.18
2843 3416 7.778083 TCTAAAACATGTCTACATACATCCGT 58.222 34.615 0.00 0.00 38.01 4.69
2844 3417 8.905850 TCTAAAACATGTCTACATACATCCGTA 58.094 33.333 0.00 0.00 38.01 4.02
2845 3418 9.692749 CTAAAACATGTCTACATACATCCGTAT 57.307 33.333 0.00 0.00 38.01 3.06
2859 3432 9.692749 CATACATCCGTATGTTGTAGTCTATTT 57.307 33.333 0.00 0.00 46.70 1.40
2860 3433 9.692749 ATACATCCGTATGTTGTAGTCTATTTG 57.307 33.333 0.00 0.00 44.07 2.32
2861 3434 7.778083 ACATCCGTATGTTGTAGTCTATTTGA 58.222 34.615 0.00 0.00 44.07 2.69
2862 3435 7.921214 ACATCCGTATGTTGTAGTCTATTTGAG 59.079 37.037 0.00 0.00 44.07 3.02
2863 3436 7.634671 TCCGTATGTTGTAGTCTATTTGAGA 57.365 36.000 0.00 0.00 0.00 3.27
2864 3437 8.234136 TCCGTATGTTGTAGTCTATTTGAGAT 57.766 34.615 0.00 0.00 36.29 2.75
2865 3438 8.135529 TCCGTATGTTGTAGTCTATTTGAGATG 58.864 37.037 0.00 0.00 36.29 2.90
2866 3439 7.382488 CCGTATGTTGTAGTCTATTTGAGATGG 59.618 40.741 0.00 0.00 36.29 3.51
2867 3440 7.096023 CGTATGTTGTAGTCTATTTGAGATGGC 60.096 40.741 0.00 0.00 36.29 4.40
2868 3441 6.299805 TGTTGTAGTCTATTTGAGATGGCT 57.700 37.500 0.00 0.00 36.29 4.75
2869 3442 7.418337 TGTTGTAGTCTATTTGAGATGGCTA 57.582 36.000 0.00 0.00 36.29 3.93
2870 3443 7.492524 TGTTGTAGTCTATTTGAGATGGCTAG 58.507 38.462 0.00 0.00 36.29 3.42
2871 3444 7.342026 TGTTGTAGTCTATTTGAGATGGCTAGA 59.658 37.037 0.00 0.00 36.29 2.43
2872 3445 7.898014 TGTAGTCTATTTGAGATGGCTAGAA 57.102 36.000 0.00 0.00 36.29 2.10
2873 3446 8.306313 TGTAGTCTATTTGAGATGGCTAGAAA 57.694 34.615 0.00 0.00 36.29 2.52
2874 3447 8.417106 TGTAGTCTATTTGAGATGGCTAGAAAG 58.583 37.037 0.00 0.00 36.29 2.62
2875 3448 7.667575 AGTCTATTTGAGATGGCTAGAAAGA 57.332 36.000 0.00 0.00 36.29 2.52
2876 3449 7.496747 AGTCTATTTGAGATGGCTAGAAAGAC 58.503 38.462 0.00 0.00 36.29 3.01
2878 3451 7.766278 GTCTATTTGAGATGGCTAGAAAGACAA 59.234 37.037 0.00 0.00 46.32 3.18
2879 3452 8.489489 TCTATTTGAGATGGCTAGAAAGACAAT 58.511 33.333 0.00 0.00 46.32 2.71
2880 3453 7.951347 ATTTGAGATGGCTAGAAAGACAATT 57.049 32.000 0.00 0.00 46.32 2.32
2882 3455 9.638176 ATTTGAGATGGCTAGAAAGACAATTAT 57.362 29.630 0.00 0.00 46.32 1.28
2883 3456 9.466497 TTTGAGATGGCTAGAAAGACAATTATT 57.534 29.630 0.00 0.00 46.32 1.40
2884 3457 9.466497 TTGAGATGGCTAGAAAGACAATTATTT 57.534 29.630 0.00 0.00 46.32 1.40
2885 3458 8.896744 TGAGATGGCTAGAAAGACAATTATTTG 58.103 33.333 0.00 0.00 46.32 2.32
2886 3459 8.230472 AGATGGCTAGAAAGACAATTATTTGG 57.770 34.615 0.00 0.00 46.32 3.28
2887 3460 6.773976 TGGCTAGAAAGACAATTATTTGGG 57.226 37.500 0.00 0.00 38.01 4.12
2888 3461 6.489603 TGGCTAGAAAGACAATTATTTGGGA 58.510 36.000 0.00 0.00 38.01 4.37
2889 3462 6.951198 TGGCTAGAAAGACAATTATTTGGGAA 59.049 34.615 0.00 0.00 38.01 3.97
2890 3463 7.093945 TGGCTAGAAAGACAATTATTTGGGAAC 60.094 37.037 0.00 0.00 38.01 3.62
2891 3464 6.967199 GCTAGAAAGACAATTATTTGGGAACG 59.033 38.462 0.00 0.00 37.15 3.95
2892 3465 6.267496 AGAAAGACAATTATTTGGGAACGG 57.733 37.500 2.66 0.00 37.15 4.44
2893 3466 6.007703 AGAAAGACAATTATTTGGGAACGGA 58.992 36.000 2.66 0.00 37.15 4.69
2894 3467 5.897377 AAGACAATTATTTGGGAACGGAG 57.103 39.130 2.66 0.00 37.15 4.63
2895 3468 4.270008 AGACAATTATTTGGGAACGGAGG 58.730 43.478 2.66 0.00 37.15 4.30
2896 3469 3.361786 ACAATTATTTGGGAACGGAGGG 58.638 45.455 2.66 0.00 37.15 4.30
2897 3470 3.010808 ACAATTATTTGGGAACGGAGGGA 59.989 43.478 2.66 0.00 37.15 4.20
2898 3471 3.577805 ATTATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
2899 3472 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2900 3473 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2903 3476 0.042131 TGGGAACGGAGGGAGTATGT 59.958 55.000 0.00 0.00 0.00 2.29
2911 3484 4.287552 ACGGAGGGAGTATGTTATCAGTT 58.712 43.478 0.00 0.00 0.00 3.16
2919 3492 7.038941 AGGGAGTATGTTATCAGTTAGGCATAC 60.039 40.741 0.00 0.00 39.02 2.39
2920 3493 7.097834 GGAGTATGTTATCAGTTAGGCATACC 58.902 42.308 0.00 0.00 39.34 2.73
2935 3508 2.092429 GCATACCTGTCCCATTCCTTGA 60.092 50.000 0.00 0.00 0.00 3.02
2939 3512 1.075374 CCTGTCCCATTCCTTGACCAA 59.925 52.381 0.00 0.00 0.00 3.67
2960 3533 6.657836 CAAATTTTGGAATCCAGAAGATGC 57.342 37.500 11.02 0.00 34.56 3.91
2966 3539 4.270245 GGAATCCAGAAGATGCCTCTAG 57.730 50.000 0.00 0.00 46.53 2.43
2968 3541 4.346418 GGAATCCAGAAGATGCCTCTAGAA 59.654 45.833 0.00 0.00 46.53 2.10
2974 3547 0.343372 AGATGCCTCTAGAACCCCCA 59.657 55.000 0.00 0.00 0.00 4.96
2978 3551 1.691195 GCCTCTAGAACCCCCAGAGC 61.691 65.000 0.00 0.00 35.50 4.09
3003 3576 0.106268 TGGCATGTCAAACTGGTGGT 60.106 50.000 0.00 0.00 0.00 4.16
3037 3610 3.958147 ATTACAGCCAGCGCGCACT 62.958 57.895 35.10 23.94 41.18 4.40
3049 3622 2.332654 GCGCACTGGATCCCGTTTT 61.333 57.895 9.90 0.00 0.00 2.43
3050 3623 1.501741 CGCACTGGATCCCGTTTTG 59.498 57.895 9.90 0.00 0.00 2.44
3053 3626 1.882352 GCACTGGATCCCGTTTTGTCT 60.882 52.381 9.90 0.00 0.00 3.41
3067 3650 0.399075 TTGTCTTTCCCGTTCTCCCC 59.601 55.000 0.00 0.00 0.00 4.81
3073 3656 3.315949 CCCGTTCTCCCCGGTCAA 61.316 66.667 0.00 0.00 43.98 3.18
3092 3675 2.751436 GCCGCCTTGCCATCTCAA 60.751 61.111 0.00 0.00 0.00 3.02
3095 3678 0.962356 CCGCCTTGCCATCTCAACTT 60.962 55.000 0.00 0.00 0.00 2.66
3096 3679 0.169672 CGCCTTGCCATCTCAACTTG 59.830 55.000 0.00 0.00 0.00 3.16
3141 3724 1.498176 CCGTTTCCCCCTTCCCTCTT 61.498 60.000 0.00 0.00 0.00 2.85
3147 3730 0.621082 CCCCCTTCCCTCTTTGTCTC 59.379 60.000 0.00 0.00 0.00 3.36
3148 3731 0.621082 CCCCTTCCCTCTTTGTCTCC 59.379 60.000 0.00 0.00 0.00 3.71
3149 3732 1.362224 CCCTTCCCTCTTTGTCTCCA 58.638 55.000 0.00 0.00 0.00 3.86
3150 3733 1.705186 CCCTTCCCTCTTTGTCTCCAA 59.295 52.381 0.00 0.00 0.00 3.53
3151 3734 2.290577 CCCTTCCCTCTTTGTCTCCAAG 60.291 54.545 0.00 0.00 0.00 3.61
3152 3735 2.431454 CTTCCCTCTTTGTCTCCAAGC 58.569 52.381 0.00 0.00 0.00 4.01
3153 3736 0.321671 TCCCTCTTTGTCTCCAAGCG 59.678 55.000 0.00 0.00 0.00 4.68
3154 3737 1.301677 CCCTCTTTGTCTCCAAGCGC 61.302 60.000 0.00 0.00 0.00 5.92
3155 3738 1.301677 CCTCTTTGTCTCCAAGCGCC 61.302 60.000 2.29 0.00 0.00 6.53
3156 3739 1.630244 CTCTTTGTCTCCAAGCGCCG 61.630 60.000 2.29 0.00 0.00 6.46
3157 3740 1.961277 CTTTGTCTCCAAGCGCCGT 60.961 57.895 2.29 0.00 0.00 5.68
3158 3741 1.901650 CTTTGTCTCCAAGCGCCGTC 61.902 60.000 2.29 0.00 0.00 4.79
3159 3742 2.652382 TTTGTCTCCAAGCGCCGTCA 62.652 55.000 2.29 0.00 0.00 4.35
3160 3743 2.125512 GTCTCCAAGCGCCGTCAT 60.126 61.111 2.29 0.00 0.00 3.06
3161 3744 2.125552 TCTCCAAGCGCCGTCATG 60.126 61.111 2.29 0.00 0.00 3.07
3162 3745 3.197790 CTCCAAGCGCCGTCATGG 61.198 66.667 2.29 5.56 42.50 3.66
3193 3776 4.899239 CCGTCAGAGGGCGCCATC 62.899 72.222 32.85 32.85 0.00 3.51
3233 3816 2.672874 GCTGACATGCACAATCGAAGTA 59.327 45.455 0.00 0.00 0.00 2.24
3237 3820 1.331756 CATGCACAATCGAAGTAGCCC 59.668 52.381 0.00 0.00 0.00 5.19
3250 3833 0.470341 GTAGCCCCTCCCAACTGATC 59.530 60.000 0.00 0.00 0.00 2.92
3251 3834 0.694444 TAGCCCCTCCCAACTGATCC 60.694 60.000 0.00 0.00 0.00 3.36
3252 3835 2.003548 GCCCCTCCCAACTGATCCT 61.004 63.158 0.00 0.00 0.00 3.24
3253 3836 1.988982 GCCCCTCCCAACTGATCCTC 61.989 65.000 0.00 0.00 0.00 3.71
3254 3837 0.621571 CCCCTCCCAACTGATCCTCA 60.622 60.000 0.00 0.00 0.00 3.86
3255 3838 1.289160 CCCTCCCAACTGATCCTCAA 58.711 55.000 0.00 0.00 0.00 3.02
3256 3839 1.065126 CCCTCCCAACTGATCCTCAAC 60.065 57.143 0.00 0.00 0.00 3.18
3258 3841 1.912043 CTCCCAACTGATCCTCAACCT 59.088 52.381 0.00 0.00 0.00 3.50
3259 3842 1.630369 TCCCAACTGATCCTCAACCTG 59.370 52.381 0.00 0.00 0.00 4.00
3260 3843 1.352352 CCCAACTGATCCTCAACCTGT 59.648 52.381 0.00 0.00 0.00 4.00
3261 3844 2.430465 CCAACTGATCCTCAACCTGTG 58.570 52.381 0.00 0.00 0.00 3.66
3272 3855 0.105964 CAACCTGTGAACCAGACCGA 59.894 55.000 0.00 0.00 44.49 4.69
3276 3859 1.616865 CCTGTGAACCAGACCGAAGTA 59.383 52.381 0.00 0.00 44.49 2.24
3277 3860 2.233922 CCTGTGAACCAGACCGAAGTAT 59.766 50.000 0.00 0.00 44.49 2.12
3278 3861 3.512680 CTGTGAACCAGACCGAAGTATC 58.487 50.000 0.00 0.00 44.49 2.24
3285 3868 5.624344 ACCAGACCGAAGTATCATATACG 57.376 43.478 0.00 0.00 0.00 3.06
3302 3885 4.053067 GGCGACGTGAACTACTCG 57.947 61.111 0.00 0.00 40.62 4.18
3303 3886 1.499056 GGCGACGTGAACTACTCGA 59.501 57.895 0.00 0.00 38.59 4.04
3312 3904 1.961394 TGAACTACTCGAACACAGCCT 59.039 47.619 0.00 0.00 0.00 4.58
3323 3915 0.106519 ACACAGCCTGAGCAAAAGGT 60.107 50.000 0.00 0.00 43.56 3.50
3324 3916 1.142870 ACACAGCCTGAGCAAAAGGTA 59.857 47.619 0.00 0.00 43.56 3.08
3333 3925 0.961753 AGCAAAAGGTAAGTGCCTGC 59.038 50.000 0.00 0.00 39.17 4.85
3385 3979 3.478857 TTGGAGCGTCTTGGTTTTAGA 57.521 42.857 0.00 0.00 0.00 2.10
3402 3996 0.545171 AGACAGTGGCCATCCATCAG 59.455 55.000 9.72 0.00 45.62 2.90
3412 4006 2.030185 GCCATCCATCAGATTCATGCAC 60.030 50.000 0.00 0.00 30.59 4.57
3413 4007 3.487372 CCATCCATCAGATTCATGCACT 58.513 45.455 0.00 0.00 30.59 4.40
3414 4008 3.253432 CCATCCATCAGATTCATGCACTG 59.747 47.826 0.00 0.00 30.59 3.66
3415 4009 2.294979 TCCATCAGATTCATGCACTGC 58.705 47.619 0.00 0.00 0.00 4.40
3416 4010 2.021457 CCATCAGATTCATGCACTGCA 58.979 47.619 6.09 6.09 44.86 4.41
3417 4011 2.425668 CCATCAGATTCATGCACTGCAA 59.574 45.455 8.03 0.00 43.62 4.08
3418 4012 3.435566 CATCAGATTCATGCACTGCAAC 58.564 45.455 8.03 0.00 43.62 4.17
3419 4013 2.506444 TCAGATTCATGCACTGCAACA 58.494 42.857 8.03 0.00 43.62 3.33
3420 4014 2.885894 TCAGATTCATGCACTGCAACAA 59.114 40.909 8.03 4.19 43.62 2.83
3421 4015 3.318557 TCAGATTCATGCACTGCAACAAA 59.681 39.130 8.03 3.36 43.62 2.83
3422 4016 4.021807 TCAGATTCATGCACTGCAACAAAT 60.022 37.500 8.03 8.02 43.62 2.32
3423 4017 4.688879 CAGATTCATGCACTGCAACAAATT 59.311 37.500 8.03 0.00 43.62 1.82
3424 4018 4.688879 AGATTCATGCACTGCAACAAATTG 59.311 37.500 8.03 0.58 43.62 2.32
3425 4019 3.729862 TCATGCACTGCAACAAATTGA 57.270 38.095 8.03 3.20 43.62 2.57
3426 4020 4.260139 TCATGCACTGCAACAAATTGAT 57.740 36.364 8.03 0.00 43.62 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.568620 ACTGAGGAGTCCTATTGTGTTTT 57.431 39.130 12.99 0.00 31.76 2.43
5 6 5.334421 ACTACTGAGGAGTCCTATTGTGTT 58.666 41.667 12.99 0.63 31.76 3.32
6 7 4.936802 ACTACTGAGGAGTCCTATTGTGT 58.063 43.478 12.99 9.14 31.76 3.72
7 8 6.123651 AGTACTACTGAGGAGTCCTATTGTG 58.876 44.000 12.99 5.58 31.76 3.33
8 9 6.330178 AGTACTACTGAGGAGTCCTATTGT 57.670 41.667 12.99 13.32 31.76 2.71
9 10 6.870971 GAGTACTACTGAGGAGTCCTATTG 57.129 45.833 12.99 7.80 31.76 1.90
18 19 3.191273 ACAGAGGGAGTACTACTGAGGA 58.809 50.000 18.80 0.00 33.53 3.71
19 20 3.547746 GACAGAGGGAGTACTACTGAGG 58.452 54.545 18.80 6.05 33.53 3.86
20 21 3.547746 GGACAGAGGGAGTACTACTGAG 58.452 54.545 18.80 8.74 33.53 3.35
21 22 2.241685 GGGACAGAGGGAGTACTACTGA 59.758 54.545 18.80 0.00 33.53 3.41
22 23 2.025226 TGGGACAGAGGGAGTACTACTG 60.025 54.545 4.77 10.44 35.14 2.74
24 25 2.822707 TGGGACAGAGGGAGTACTAC 57.177 55.000 0.00 0.00 0.00 2.73
25 26 3.839323 TTTGGGACAGAGGGAGTACTA 57.161 47.619 0.00 0.00 42.39 1.82
26 27 2.715763 TTTGGGACAGAGGGAGTACT 57.284 50.000 0.00 0.00 42.39 2.73
27 28 5.045797 ACTTATTTTGGGACAGAGGGAGTAC 60.046 44.000 0.00 0.00 42.39 2.73
29 30 3.916989 ACTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
30 31 4.019321 TCACTTATTTTGGGACAGAGGGAG 60.019 45.833 0.00 0.00 42.39 4.30
32 33 4.010349 GTCACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
36 37 5.765182 AGTTGAGTCACTTATTTTGGGACAG 59.235 40.000 0.00 0.00 42.39 3.51
38 39 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
40 41 6.805713 ACAAAGTTGAGTCACTTATTTTGGG 58.194 36.000 12.94 0.00 35.87 4.12
41 42 8.621286 AGTACAAAGTTGAGTCACTTATTTTGG 58.379 33.333 12.94 0.78 35.87 3.28
77 78 8.793592 GTCCCAAAATAAGTGACTCAACTTTAT 58.206 33.333 0.00 0.00 40.77 1.40
78 79 7.041644 CGTCCCAAAATAAGTGACTCAACTTTA 60.042 37.037 0.00 0.00 40.77 1.85
82 83 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
83 84 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
85 86 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
86 87 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
87 88 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
88 89 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
89 90 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
91 92 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
92 93 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
93 94 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
95 96 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
96 97 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
99 100 0.978907 TTTTGTACTCCCTCCGTCCC 59.021 55.000 0.00 0.00 0.00 4.46
100 101 1.345415 TGTTTTGTACTCCCTCCGTCC 59.655 52.381 0.00 0.00 0.00 4.79
101 102 2.825861 TGTTTTGTACTCCCTCCGTC 57.174 50.000 0.00 0.00 0.00 4.79
102 103 2.874457 GCATGTTTTGTACTCCCTCCGT 60.874 50.000 0.00 0.00 0.00 4.69
103 104 1.737793 GCATGTTTTGTACTCCCTCCG 59.262 52.381 0.00 0.00 0.00 4.63
104 105 2.092323 GGCATGTTTTGTACTCCCTCC 58.908 52.381 0.00 0.00 0.00 4.30
105 106 2.790433 TGGCATGTTTTGTACTCCCTC 58.210 47.619 0.00 0.00 0.00 4.30
107 108 3.356290 AGATGGCATGTTTTGTACTCCC 58.644 45.455 3.81 0.00 0.00 4.30
108 109 4.265073 AGAGATGGCATGTTTTGTACTCC 58.735 43.478 3.81 0.00 0.00 3.85
109 110 5.007136 GCTAGAGATGGCATGTTTTGTACTC 59.993 44.000 3.81 2.33 0.00 2.59
154 155 0.588252 CTGACGGTCTGGCAGTTTTG 59.412 55.000 15.27 5.87 0.00 2.44
155 156 0.180406 ACTGACGGTCTGGCAGTTTT 59.820 50.000 14.93 0.00 39.69 2.43
156 157 1.045407 TACTGACGGTCTGGCAGTTT 58.955 50.000 25.28 4.10 42.40 2.66
157 158 1.045407 TTACTGACGGTCTGGCAGTT 58.955 50.000 25.28 9.81 42.40 3.16
160 170 1.754803 CCTATTACTGACGGTCTGGCA 59.245 52.381 17.64 5.62 0.00 4.92
167 177 3.021695 TGGACTGACCTATTACTGACGG 58.978 50.000 0.00 0.00 39.86 4.79
175 185 2.472029 CCTCTGGTGGACTGACCTATT 58.528 52.381 0.00 0.00 39.86 1.73
189 199 1.089920 CTTCGGTCAAATGCCTCTGG 58.910 55.000 0.00 0.00 0.00 3.86
201 211 3.689649 ACATATTGTCCTTTGCTTCGGTC 59.310 43.478 0.00 0.00 0.00 4.79
204 214 4.728882 GCTCACATATTGTCCTTTGCTTCG 60.729 45.833 0.00 0.00 0.00 3.79
205 215 4.156556 TGCTCACATATTGTCCTTTGCTTC 59.843 41.667 0.00 0.00 0.00 3.86
206 216 4.081406 TGCTCACATATTGTCCTTTGCTT 58.919 39.130 0.00 0.00 0.00 3.91
240 253 8.946085 CACCATGAGCTTTACTAAATAAGAACA 58.054 33.333 0.00 0.00 0.00 3.18
241 254 7.910683 GCACCATGAGCTTTACTAAATAAGAAC 59.089 37.037 0.00 0.00 0.00 3.01
242 255 7.829211 AGCACCATGAGCTTTACTAAATAAGAA 59.171 33.333 6.78 0.00 39.87 2.52
258 271 3.192001 AGCATTAACACAAGCACCATGAG 59.808 43.478 0.00 0.00 0.00 2.90
376 389 9.277783 ACTAGCAGGATTGATATTTGACATAAC 57.722 33.333 0.00 0.00 0.00 1.89
377 390 9.851686 AACTAGCAGGATTGATATTTGACATAA 57.148 29.630 0.00 0.00 0.00 1.90
378 391 9.851686 AAACTAGCAGGATTGATATTTGACATA 57.148 29.630 0.00 0.00 0.00 2.29
391 404 9.700831 AGGATATTTGTTTAAACTAGCAGGATT 57.299 29.630 18.72 0.00 0.00 3.01
422 776 1.886542 GGCTAAAGTGTCAAACTGGGG 59.113 52.381 0.00 0.00 39.81 4.96
466 820 9.702494 TGCTTCTCAATATGTTATCTATCACTG 57.298 33.333 0.00 0.00 0.00 3.66
481 835 8.347004 TGAAATGGTTAATGTGCTTCTCAATA 57.653 30.769 0.00 0.00 0.00 1.90
537 894 8.063038 TCAATTTTTCATTTTCAATGCTCAACG 58.937 29.630 0.00 0.00 0.00 4.10
613 970 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
614 971 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
615 972 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
616 973 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
617 974 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
618 975 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
619 976 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
620 977 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
621 978 1.314730 TGGGACAAGCTTTTTCGGAC 58.685 50.000 0.00 0.00 31.92 4.79
622 979 3.811031 TGGGACAAGCTTTTTCGGA 57.189 47.368 0.00 0.00 31.92 4.55
631 988 2.463675 GCGACAAGCTTGGGACAAGC 62.464 60.000 29.18 22.54 44.04 4.01
632 989 1.576421 GCGACAAGCTTGGGACAAG 59.424 57.895 29.18 14.25 44.04 3.16
633 990 3.744559 GCGACAAGCTTGGGACAA 58.255 55.556 29.18 0.00 44.04 3.18
643 1000 4.813161 AGATACATCCATTTGAGCGACAAG 59.187 41.667 0.00 0.00 39.77 3.16
644 1001 4.769688 AGATACATCCATTTGAGCGACAA 58.230 39.130 0.00 0.00 36.65 3.18
645 1002 4.406648 AGATACATCCATTTGAGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
646 1003 4.387256 GCTAGATACATCCATTTGAGCGAC 59.613 45.833 0.00 0.00 0.00 5.19
647 1004 4.039124 TGCTAGATACATCCATTTGAGCGA 59.961 41.667 0.00 0.00 0.00 4.93
648 1005 4.151335 GTGCTAGATACATCCATTTGAGCG 59.849 45.833 0.00 0.00 0.00 5.03
649 1006 5.303971 AGTGCTAGATACATCCATTTGAGC 58.696 41.667 0.00 0.00 0.00 4.26
650 1007 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
651 1008 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
652 1009 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
653 1010 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
654 1011 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
655 1012 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
656 1013 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
657 1014 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
669 1026 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
670 1027 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
671 1028 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
672 1029 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
673 1030 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
674 1031 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
675 1032 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
676 1033 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
677 1034 5.455183 CCTCAAATGGATGTATCTAGCACCA 60.455 44.000 0.00 0.00 0.00 4.17
678 1035 4.999950 CCTCAAATGGATGTATCTAGCACC 59.000 45.833 0.00 0.00 0.00 5.01
679 1036 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
680 1037 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
681 1038 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
682 1039 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
683 1040 6.183361 CCTTGTCCCTCAAATGGATGTATCTA 60.183 42.308 0.00 0.00 35.48 1.98
684 1041 5.398353 CCTTGTCCCTCAAATGGATGTATCT 60.398 44.000 0.00 0.00 35.48 1.98
685 1042 4.823989 CCTTGTCCCTCAAATGGATGTATC 59.176 45.833 0.00 0.00 35.48 2.24
686 1043 4.230502 ACCTTGTCCCTCAAATGGATGTAT 59.769 41.667 0.00 0.00 35.48 2.29
687 1044 3.591527 ACCTTGTCCCTCAAATGGATGTA 59.408 43.478 0.00 0.00 35.48 2.29
688 1045 2.379907 ACCTTGTCCCTCAAATGGATGT 59.620 45.455 0.00 0.00 35.48 3.06
689 1046 3.091633 ACCTTGTCCCTCAAATGGATG 57.908 47.619 0.00 0.00 35.48 3.51
690 1047 3.833559 AACCTTGTCCCTCAAATGGAT 57.166 42.857 0.00 0.00 35.48 3.41
691 1048 3.611025 AAACCTTGTCCCTCAAATGGA 57.389 42.857 0.00 0.00 35.48 3.41
692 1049 4.631131 GAAAAACCTTGTCCCTCAAATGG 58.369 43.478 0.00 0.00 35.48 3.16
693 1050 4.298332 CGAAAAACCTTGTCCCTCAAATG 58.702 43.478 0.00 0.00 35.48 2.32
694 1051 3.320826 CCGAAAAACCTTGTCCCTCAAAT 59.679 43.478 0.00 0.00 35.48 2.32
695 1052 2.691011 CCGAAAAACCTTGTCCCTCAAA 59.309 45.455 0.00 0.00 35.48 2.69
696 1053 2.092321 TCCGAAAAACCTTGTCCCTCAA 60.092 45.455 0.00 0.00 34.61 3.02
697 1054 1.491332 TCCGAAAAACCTTGTCCCTCA 59.509 47.619 0.00 0.00 0.00 3.86
698 1055 1.878088 GTCCGAAAAACCTTGTCCCTC 59.122 52.381 0.00 0.00 0.00 4.30
699 1056 1.812708 CGTCCGAAAAACCTTGTCCCT 60.813 52.381 0.00 0.00 0.00 4.20
700 1057 0.589708 CGTCCGAAAAACCTTGTCCC 59.410 55.000 0.00 0.00 0.00 4.46
701 1058 0.589708 CCGTCCGAAAAACCTTGTCC 59.410 55.000 0.00 0.00 0.00 4.02
702 1059 1.529865 CTCCGTCCGAAAAACCTTGTC 59.470 52.381 0.00 0.00 0.00 3.18
703 1060 1.589803 CTCCGTCCGAAAAACCTTGT 58.410 50.000 0.00 0.00 0.00 3.16
704 1061 0.872388 CCTCCGTCCGAAAAACCTTG 59.128 55.000 0.00 0.00 0.00 3.61
705 1062 0.250597 CCCTCCGTCCGAAAAACCTT 60.251 55.000 0.00 0.00 0.00 3.50
706 1063 1.123246 TCCCTCCGTCCGAAAAACCT 61.123 55.000 0.00 0.00 0.00 3.50
707 1064 0.672711 CTCCCTCCGTCCGAAAAACC 60.673 60.000 0.00 0.00 0.00 3.27
708 1065 0.034476 ACTCCCTCCGTCCGAAAAAC 59.966 55.000 0.00 0.00 0.00 2.43
709 1066 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
710 1067 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
711 1068 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
712 1069 2.173356 TCTTATACTCCCTCCGTCCGAA 59.827 50.000 0.00 0.00 0.00 4.30
713 1070 1.770658 TCTTATACTCCCTCCGTCCGA 59.229 52.381 0.00 0.00 0.00 4.55
714 1071 1.878734 GTCTTATACTCCCTCCGTCCG 59.121 57.143 0.00 0.00 0.00 4.79
715 1072 2.941480 TGTCTTATACTCCCTCCGTCC 58.059 52.381 0.00 0.00 0.00 4.79
716 1073 4.401837 AGTTTGTCTTATACTCCCTCCGTC 59.598 45.833 0.00 0.00 0.00 4.79
717 1074 4.351127 AGTTTGTCTTATACTCCCTCCGT 58.649 43.478 0.00 0.00 0.00 4.69
718 1075 4.645588 AGAGTTTGTCTTATACTCCCTCCG 59.354 45.833 0.00 0.00 39.23 4.63
719 1076 5.163395 CCAGAGTTTGTCTTATACTCCCTCC 60.163 48.000 0.00 0.00 39.23 4.30
720 1077 5.422650 ACCAGAGTTTGTCTTATACTCCCTC 59.577 44.000 0.00 0.00 39.23 4.30
721 1078 5.342866 ACCAGAGTTTGTCTTATACTCCCT 58.657 41.667 0.00 0.00 39.23 4.20
722 1079 5.678955 ACCAGAGTTTGTCTTATACTCCC 57.321 43.478 0.00 0.00 39.23 4.30
723 1080 7.122353 TCACTACCAGAGTTTGTCTTATACTCC 59.878 40.741 0.00 0.00 39.23 3.85
724 1081 8.053026 TCACTACCAGAGTTTGTCTTATACTC 57.947 38.462 0.00 0.00 35.64 2.59
725 1082 8.596781 ATCACTACCAGAGTTTGTCTTATACT 57.403 34.615 0.00 0.00 35.64 2.12
726 1083 9.953697 CTATCACTACCAGAGTTTGTCTTATAC 57.046 37.037 0.00 0.00 35.64 1.47
727 1084 9.132923 CCTATCACTACCAGAGTTTGTCTTATA 57.867 37.037 0.00 0.00 35.64 0.98
863 1229 0.814812 GATGGCTCTTCTGGCTGCTC 60.815 60.000 0.00 0.00 0.00 4.26
934 1309 5.105146 TGAGAGAGCAAGATTAGGAAGGAAC 60.105 44.000 0.00 0.00 0.00 3.62
1084 1469 7.475137 ACACTCTTCAGCTAATTAAGAGAGT 57.525 36.000 23.47 20.16 45.94 3.24
1138 1529 0.603569 GAGACGGTCTTCAGAAGCCA 59.396 55.000 12.67 0.00 0.00 4.75
1152 1543 3.599343 TGGACAAATTCCTGATGAGACG 58.401 45.455 0.00 0.00 46.10 4.18
1307 1719 0.031314 CGACCGCTGCATCTATCAGT 59.969 55.000 0.00 0.00 34.21 3.41
1316 1728 1.396648 CATAATTCAACGACCGCTGCA 59.603 47.619 0.00 0.00 0.00 4.41
1474 1886 2.100989 GGAGTACACAGACTTCCGGAT 58.899 52.381 4.15 0.00 0.00 4.18
1584 2001 4.234550 TCATAGAATGACCCTGGCACTAT 58.765 43.478 0.00 0.00 33.59 2.12
1679 2097 3.796504 GCTGGAGTGGTGTCAAACAAATG 60.797 47.826 0.00 0.00 0.00 2.32
1883 2316 1.821136 GCCTTCTGGGACCAATTCTTG 59.179 52.381 0.00 0.00 37.23 3.02
1957 2390 1.556911 GCAGTTCCCCAGATGAGAGAA 59.443 52.381 0.00 0.00 0.00 2.87
2061 2621 2.766263 TCACACCCTGTTAGCTATCCAG 59.234 50.000 12.00 12.00 0.00 3.86
2068 2628 2.778299 TGTCAATCACACCCTGTTAGC 58.222 47.619 0.00 0.00 0.00 3.09
2090 2651 5.705609 TGTACAAAGAATCAAGCCTTTCC 57.294 39.130 0.00 0.00 30.89 3.13
2095 2656 4.035208 CCGGTATGTACAAAGAATCAAGCC 59.965 45.833 0.00 0.00 0.00 4.35
2318 2891 2.165301 GCCGGTCCTCACGAATTCG 61.165 63.158 25.64 25.64 46.33 3.34
2340 2913 2.688794 GCTGCAGGCTCAAGTGCTC 61.689 63.158 17.12 0.00 40.54 4.26
2372 2945 0.326595 TCGGGTTTCTGGCATGCTTA 59.673 50.000 18.92 6.33 0.00 3.09
2439 3012 0.248843 AGACTAGCAGCAGCAACTCC 59.751 55.000 3.17 0.00 45.49 3.85
2441 3014 0.683973 ACAGACTAGCAGCAGCAACT 59.316 50.000 3.17 0.00 45.49 3.16
2465 3038 2.226437 AGACATGTCACAAATTGGCGAC 59.774 45.455 27.02 9.85 29.36 5.19
2502 3075 6.865726 CCTCTCTCACATATCCGATTAAGTTG 59.134 42.308 0.00 0.00 0.00 3.16
2516 3089 2.544721 TGGCTTCTTCCTCTCTCACAT 58.455 47.619 0.00 0.00 0.00 3.21
2526 3099 4.202441 TCAGCAGATATTTGGCTTCTTCC 58.798 43.478 0.00 0.00 35.27 3.46
2530 3103 5.233689 GCAATTTCAGCAGATATTTGGCTTC 59.766 40.000 0.00 0.00 35.27 3.86
2534 3107 6.018262 CCAATGCAATTTCAGCAGATATTTGG 60.018 38.462 0.00 0.00 46.36 3.28
2559 3132 0.459489 AGAGAGAAGCGCATGTCTCC 59.541 55.000 29.20 19.62 39.81 3.71
2582 3155 7.977789 TGTGAGACATATACTTTGCTGAAAA 57.022 32.000 0.00 0.00 0.00 2.29
2694 3267 1.474143 GCCCAGTGGAGAGCATAACTC 60.474 57.143 11.95 0.00 46.66 3.01
2698 3271 2.072487 GGGCCCAGTGGAGAGCATA 61.072 63.158 19.95 0.00 0.00 3.14
2699 3272 3.415087 GGGCCCAGTGGAGAGCAT 61.415 66.667 19.95 0.00 0.00 3.79
2702 3275 1.692042 AGATGGGCCCAGTGGAGAG 60.692 63.158 31.97 0.00 0.00 3.20
2708 3281 1.692042 CAGGAGAGATGGGCCCAGT 60.692 63.158 31.97 20.57 0.00 4.00
2713 3286 1.757423 GAGAGCCAGGAGAGATGGGC 61.757 65.000 0.00 0.00 46.77 5.36
2738 3311 5.681639 ACAATTATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2739 3312 5.427481 AGACAATTATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2740 3313 5.681639 AGACAATTATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2741 3314 7.553044 AGAAAGACAATTATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2742 3315 8.494016 AGAAAGACAATTATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2743 3316 9.595823 CTAGAAAGACAATTATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2744 3317 9.595823 TCTAGAAAGACAATTATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2757 3330 9.566432 ACTTGTTGAAATCTCTAGAAAGACAAT 57.434 29.630 0.00 0.00 0.00 2.71
2758 3331 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2759 3332 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2760 3333 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2761 3334 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2762 3335 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2763 3336 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2764 3337 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2765 3338 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2766 3339 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2767 3340 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2768 3341 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2769 3342 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
2770 3343 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
2771 3344 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
2772 3345 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2773 3346 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2774 3347 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2775 3348 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2776 3349 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2777 3350 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2778 3351 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2779 3352 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2780 3353 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2781 3354 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2782 3355 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2783 3356 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2784 3357 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2785 3358 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2786 3359 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2787 3360 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2788 3361 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2789 3362 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2790 3363 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2791 3364 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2792 3365 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2793 3366 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2794 3367 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2795 3368 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2806 3379 8.764524 AGACATGTTTTAGAGTGTAGATTCAC 57.235 34.615 0.00 0.00 38.46 3.18
2807 3380 9.856488 GTAGACATGTTTTAGAGTGTAGATTCA 57.144 33.333 0.00 0.00 0.00 2.57
2808 3381 9.856488 TGTAGACATGTTTTAGAGTGTAGATTC 57.144 33.333 0.00 0.00 0.00 2.52
2814 3387 9.587772 GATGTATGTAGACATGTTTTAGAGTGT 57.412 33.333 0.00 0.00 40.18 3.55
2815 3388 9.035607 GGATGTATGTAGACATGTTTTAGAGTG 57.964 37.037 0.00 0.00 40.18 3.51
2816 3389 7.921214 CGGATGTATGTAGACATGTTTTAGAGT 59.079 37.037 0.00 0.00 40.18 3.24
2817 3390 7.921214 ACGGATGTATGTAGACATGTTTTAGAG 59.079 37.037 0.00 0.00 40.18 2.43
2818 3391 7.778083 ACGGATGTATGTAGACATGTTTTAGA 58.222 34.615 0.00 0.00 40.18 2.10
2819 3392 9.692749 ATACGGATGTATGTAGACATGTTTTAG 57.307 33.333 0.00 0.00 40.18 1.85
2834 3407 9.692749 CAAATAGACTACAACATACGGATGTAT 57.307 33.333 15.10 8.21 45.93 2.29
2835 3408 8.905850 TCAAATAGACTACAACATACGGATGTA 58.094 33.333 15.10 0.00 45.93 2.29
2837 3410 8.135529 TCTCAAATAGACTACAACATACGGATG 58.864 37.037 5.94 5.94 39.16 3.51
2838 3411 8.234136 TCTCAAATAGACTACAACATACGGAT 57.766 34.615 0.00 0.00 0.00 4.18
2839 3412 7.634671 TCTCAAATAGACTACAACATACGGA 57.365 36.000 0.00 0.00 0.00 4.69
2840 3413 7.382488 CCATCTCAAATAGACTACAACATACGG 59.618 40.741 0.00 0.00 36.93 4.02
2841 3414 7.096023 GCCATCTCAAATAGACTACAACATACG 60.096 40.741 0.00 0.00 36.93 3.06
2842 3415 7.928706 AGCCATCTCAAATAGACTACAACATAC 59.071 37.037 0.00 0.00 36.93 2.39
2843 3416 8.023021 AGCCATCTCAAATAGACTACAACATA 57.977 34.615 0.00 0.00 36.93 2.29
2844 3417 6.893583 AGCCATCTCAAATAGACTACAACAT 58.106 36.000 0.00 0.00 36.93 2.71
2845 3418 6.299805 AGCCATCTCAAATAGACTACAACA 57.700 37.500 0.00 0.00 36.93 3.33
2846 3419 7.717568 TCTAGCCATCTCAAATAGACTACAAC 58.282 38.462 0.00 0.00 36.93 3.32
2847 3420 7.898014 TCTAGCCATCTCAAATAGACTACAA 57.102 36.000 0.00 0.00 36.93 2.41
2848 3421 7.898014 TTCTAGCCATCTCAAATAGACTACA 57.102 36.000 0.00 0.00 36.93 2.74
2849 3422 8.634444 TCTTTCTAGCCATCTCAAATAGACTAC 58.366 37.037 0.00 0.00 36.93 2.73
2850 3423 8.634444 GTCTTTCTAGCCATCTCAAATAGACTA 58.366 37.037 0.00 0.00 36.93 2.59
2851 3424 7.124901 TGTCTTTCTAGCCATCTCAAATAGACT 59.875 37.037 0.00 0.00 36.93 3.24
2852 3425 7.268586 TGTCTTTCTAGCCATCTCAAATAGAC 58.731 38.462 0.00 0.00 36.93 2.59
2853 3426 7.423844 TGTCTTTCTAGCCATCTCAAATAGA 57.576 36.000 0.00 0.00 39.02 1.98
2854 3427 8.674263 ATTGTCTTTCTAGCCATCTCAAATAG 57.326 34.615 0.00 0.00 0.00 1.73
2856 3429 7.951347 AATTGTCTTTCTAGCCATCTCAAAT 57.049 32.000 0.00 0.00 0.00 2.32
2857 3430 9.466497 AATAATTGTCTTTCTAGCCATCTCAAA 57.534 29.630 0.00 0.00 0.00 2.69
2858 3431 9.466497 AAATAATTGTCTTTCTAGCCATCTCAA 57.534 29.630 0.00 0.00 0.00 3.02
2859 3432 8.896744 CAAATAATTGTCTTTCTAGCCATCTCA 58.103 33.333 0.00 0.00 0.00 3.27
2860 3433 8.348507 CCAAATAATTGTCTTTCTAGCCATCTC 58.651 37.037 0.00 0.00 34.60 2.75
2861 3434 7.286316 CCCAAATAATTGTCTTTCTAGCCATCT 59.714 37.037 0.00 0.00 34.60 2.90
2862 3435 7.285401 TCCCAAATAATTGTCTTTCTAGCCATC 59.715 37.037 0.00 0.00 34.60 3.51
2863 3436 7.125391 TCCCAAATAATTGTCTTTCTAGCCAT 58.875 34.615 0.00 0.00 34.60 4.40
2864 3437 6.489603 TCCCAAATAATTGTCTTTCTAGCCA 58.510 36.000 0.00 0.00 34.60 4.75
2865 3438 7.258441 GTTCCCAAATAATTGTCTTTCTAGCC 58.742 38.462 0.00 0.00 34.60 3.93
2866 3439 6.967199 CGTTCCCAAATAATTGTCTTTCTAGC 59.033 38.462 0.00 0.00 34.60 3.42
2867 3440 7.335924 TCCGTTCCCAAATAATTGTCTTTCTAG 59.664 37.037 0.00 0.00 34.60 2.43
2868 3441 7.169591 TCCGTTCCCAAATAATTGTCTTTCTA 58.830 34.615 0.00 0.00 34.60 2.10
2869 3442 6.007703 TCCGTTCCCAAATAATTGTCTTTCT 58.992 36.000 0.00 0.00 34.60 2.52
2870 3443 6.262193 TCCGTTCCCAAATAATTGTCTTTC 57.738 37.500 0.00 0.00 34.60 2.62
2871 3444 5.185056 CCTCCGTTCCCAAATAATTGTCTTT 59.815 40.000 0.00 0.00 34.60 2.52
2872 3445 4.705023 CCTCCGTTCCCAAATAATTGTCTT 59.295 41.667 0.00 0.00 34.60 3.01
2873 3446 4.270008 CCTCCGTTCCCAAATAATTGTCT 58.730 43.478 0.00 0.00 34.60 3.41
2874 3447 3.380320 CCCTCCGTTCCCAAATAATTGTC 59.620 47.826 0.00 0.00 34.60 3.18
2875 3448 3.010808 TCCCTCCGTTCCCAAATAATTGT 59.989 43.478 0.00 0.00 34.60 2.71
2876 3449 3.626930 TCCCTCCGTTCCCAAATAATTG 58.373 45.455 0.00 0.00 36.25 2.32
2877 3450 3.268595 ACTCCCTCCGTTCCCAAATAATT 59.731 43.478 0.00 0.00 0.00 1.40
2878 3451 2.850568 ACTCCCTCCGTTCCCAAATAAT 59.149 45.455 0.00 0.00 0.00 1.28
2879 3452 2.271777 ACTCCCTCCGTTCCCAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2880 3453 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2881 3454 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
2882 3455 1.557832 CATACTCCCTCCGTTCCCAAA 59.442 52.381 0.00 0.00 0.00 3.28
2883 3456 1.200519 CATACTCCCTCCGTTCCCAA 58.799 55.000 0.00 0.00 0.00 4.12
2884 3457 0.042131 ACATACTCCCTCCGTTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
2885 3458 1.201424 AACATACTCCCTCCGTTCCC 58.799 55.000 0.00 0.00 0.00 3.97
2886 3459 3.640029 TGATAACATACTCCCTCCGTTCC 59.360 47.826 0.00 0.00 0.00 3.62
2887 3460 4.341520 ACTGATAACATACTCCCTCCGTTC 59.658 45.833 0.00 0.00 0.00 3.95
2888 3461 4.287552 ACTGATAACATACTCCCTCCGTT 58.712 43.478 0.00 0.00 0.00 4.44
2889 3462 3.912248 ACTGATAACATACTCCCTCCGT 58.088 45.455 0.00 0.00 0.00 4.69
2890 3463 4.939052 AACTGATAACATACTCCCTCCG 57.061 45.455 0.00 0.00 0.00 4.63
2891 3464 5.279556 GCCTAACTGATAACATACTCCCTCC 60.280 48.000 0.00 0.00 0.00 4.30
2892 3465 5.304614 TGCCTAACTGATAACATACTCCCTC 59.695 44.000 0.00 0.00 0.00 4.30
2893 3466 5.216622 TGCCTAACTGATAACATACTCCCT 58.783 41.667 0.00 0.00 0.00 4.20
2894 3467 5.546621 TGCCTAACTGATAACATACTCCC 57.453 43.478 0.00 0.00 0.00 4.30
2895 3468 7.038941 AGGTATGCCTAACTGATAACATACTCC 60.039 40.741 0.00 0.00 44.90 3.85
2896 3469 7.815068 CAGGTATGCCTAACTGATAACATACTC 59.185 40.741 8.25 2.62 44.16 2.59
2897 3470 7.290248 ACAGGTATGCCTAACTGATAACATACT 59.710 37.037 19.48 0.00 44.16 2.12
2898 3471 7.442656 ACAGGTATGCCTAACTGATAACATAC 58.557 38.462 19.48 0.00 44.16 2.39
2899 3472 7.256190 GGACAGGTATGCCTAACTGATAACATA 60.256 40.741 19.48 0.00 44.16 2.29
2900 3473 6.464465 GGACAGGTATGCCTAACTGATAACAT 60.464 42.308 19.48 0.00 44.16 2.71
2903 3476 4.347000 GGGACAGGTATGCCTAACTGATAA 59.653 45.833 19.48 0.00 44.16 1.75
2921 3494 8.375234 CCAAAATTTGGTCAAGGAATGGGACA 62.375 42.308 16.24 0.00 45.93 4.02
2922 3495 4.890158 AAATTTGGTCAAGGAATGGGAC 57.110 40.909 0.00 0.00 0.00 4.46
2923 3496 4.041444 CCAAAATTTGGTCAAGGAATGGGA 59.959 41.667 16.24 0.00 45.93 4.37
2924 3497 4.325972 CCAAAATTTGGTCAAGGAATGGG 58.674 43.478 16.24 0.00 45.93 4.00
2935 3508 6.704310 CATCTTCTGGATTCCAAAATTTGGT 58.296 36.000 22.59 6.12 41.21 3.67
2939 3512 5.028131 AGGCATCTTCTGGATTCCAAAATT 58.972 37.500 6.88 0.00 39.66 1.82
2950 3523 2.103941 GGGTTCTAGAGGCATCTTCTGG 59.896 54.545 6.05 0.00 36.96 3.86
2960 3533 1.395826 CGCTCTGGGGGTTCTAGAGG 61.396 65.000 8.14 0.00 38.65 3.69
2963 3536 2.501610 GCGCTCTGGGGGTTCTAG 59.498 66.667 0.00 0.00 0.00 2.43
2964 3537 3.458163 CGCGCTCTGGGGGTTCTA 61.458 66.667 5.56 0.00 0.00 2.10
2966 3539 4.699522 AACGCGCTCTGGGGGTTC 62.700 66.667 5.73 0.00 45.22 3.62
2974 3547 2.669569 ACATGCCAAACGCGCTCT 60.670 55.556 5.73 0.00 42.08 4.09
2978 3551 2.132402 GTTTGACATGCCAAACGCG 58.868 52.632 19.73 3.53 44.05 6.01
3020 3593 4.680237 AGTGCGCGCTGGCTGTAA 62.680 61.111 33.29 5.92 36.88 2.41
3037 3610 2.510613 GGAAAGACAAAACGGGATCCA 58.489 47.619 15.23 0.00 0.00 3.41
3041 3614 0.180878 ACGGGAAAGACAAAACGGGA 59.819 50.000 0.00 0.00 0.00 5.14
3043 3616 1.944709 AGAACGGGAAAGACAAAACGG 59.055 47.619 0.00 0.00 0.00 4.44
3049 3622 1.823169 CGGGGAGAACGGGAAAGACA 61.823 60.000 0.00 0.00 0.00 3.41
3050 3623 1.079336 CGGGGAGAACGGGAAAGAC 60.079 63.158 0.00 0.00 0.00 3.01
3123 3706 0.404426 AAAGAGGGAAGGGGGAAACG 59.596 55.000 0.00 0.00 0.00 3.60
3193 3776 3.362399 ATGTGCGACCTCTGAGGCG 62.362 63.158 23.43 24.85 39.63 5.52
3225 3808 0.326238 TTGGGAGGGGCTACTTCGAT 60.326 55.000 0.00 0.00 0.00 3.59
3233 3816 2.003548 GGATCAGTTGGGAGGGGCT 61.004 63.158 0.00 0.00 0.00 5.19
3258 3841 2.894765 TGATACTTCGGTCTGGTTCACA 59.105 45.455 0.00 0.00 0.00 3.58
3259 3842 3.587797 TGATACTTCGGTCTGGTTCAC 57.412 47.619 0.00 0.00 0.00 3.18
3260 3843 6.293790 CGTATATGATACTTCGGTCTGGTTCA 60.294 42.308 0.00 0.00 0.00 3.18
3261 3844 6.084925 CGTATATGATACTTCGGTCTGGTTC 58.915 44.000 0.00 0.00 0.00 3.62
3285 3868 0.110056 TTCGAGTAGTTCACGTCGCC 60.110 55.000 0.00 0.00 31.78 5.54
3298 3881 1.005630 GCTCAGGCTGTGTTCGAGT 60.006 57.895 15.27 0.00 35.22 4.18
3299 3882 0.601046 TTGCTCAGGCTGTGTTCGAG 60.601 55.000 15.27 4.26 39.59 4.04
3300 3883 0.179059 TTTGCTCAGGCTGTGTTCGA 60.179 50.000 15.27 0.00 39.59 3.71
3302 3885 1.000938 CCTTTTGCTCAGGCTGTGTTC 60.001 52.381 15.27 0.84 39.59 3.18
3303 3886 1.035139 CCTTTTGCTCAGGCTGTGTT 58.965 50.000 15.27 0.00 39.59 3.32
3312 3904 2.229792 CAGGCACTTACCTTTTGCTCA 58.770 47.619 0.00 0.00 38.26 4.26
3323 3915 4.316645 TGTAATTTGTACGCAGGCACTTA 58.683 39.130 0.00 0.00 34.60 2.24
3324 3916 3.142951 TGTAATTTGTACGCAGGCACTT 58.857 40.909 0.00 0.00 34.60 3.16
3357 3949 5.059404 ACCAAGACGCTCCAATTTATTTG 57.941 39.130 0.00 0.00 34.93 2.32
3365 3957 3.135994 GTCTAAAACCAAGACGCTCCAA 58.864 45.455 0.00 0.00 34.50 3.53
3402 3996 4.687018 TCAATTTGTTGCAGTGCATGAATC 59.313 37.500 20.50 8.05 38.76 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.