Multiple sequence alignment - TraesCS3B01G420000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G420000 chr3B 100.000 3230 0 0 1 3230 656604676 656601447 0.000000e+00 5965
1 TraesCS3B01G420000 chr3B 88.525 1403 128 18 1402 2794 465042904 465041525 0.000000e+00 1668
2 TraesCS3B01G420000 chr3B 85.755 1411 118 42 268 1601 465044030 465042626 0.000000e+00 1415
3 TraesCS3B01G420000 chr2B 88.827 2515 198 47 343 2790 25340898 25338400 0.000000e+00 3011
4 TraesCS3B01G420000 chr2B 88.913 1380 121 18 1426 2795 457194935 457196292 0.000000e+00 1672
5 TraesCS3B01G420000 chr2B 85.626 1454 116 48 268 1663 457193772 457195190 0.000000e+00 1441
6 TraesCS3B01G420000 chr2B 95.076 264 10 2 1 263 457193411 457193672 2.320000e-111 412
7 TraesCS3B01G420000 chr2B 94.382 267 12 2 1 266 25341397 25341133 1.080000e-109 407
8 TraesCS3B01G420000 chr2B 91.489 94 3 1 268 356 25341036 25340943 1.220000e-24 124
9 TraesCS3B01G420000 chr2A 87.879 2244 174 51 343 2525 748227198 748229404 0.000000e+00 2547
10 TraesCS3B01G420000 chr2A 90.542 719 50 11 268 972 728781713 728780999 0.000000e+00 935
11 TraesCS3B01G420000 chr2A 94.382 267 12 2 1 266 728782074 728781810 1.080000e-109 407
12 TraesCS3B01G420000 chr2A 94.318 264 12 2 1 263 748226711 748226972 5.020000e-108 401
13 TraesCS3B01G420000 chr5A 94.142 1434 80 4 1361 2793 634170669 634169239 0.000000e+00 2180
14 TraesCS3B01G420000 chr5A 85.632 1385 173 20 1428 2796 452243883 452245257 0.000000e+00 1432
15 TraesCS3B01G420000 chr5A 90.842 808 57 13 897 1695 634171230 634170431 0.000000e+00 1066
16 TraesCS3B01G420000 chr5A 93.872 718 14 7 268 961 634171912 634171201 0.000000e+00 1055
17 TraesCS3B01G420000 chr5A 90.659 728 48 7 268 977 452242415 452243140 0.000000e+00 950
18 TraesCS3B01G420000 chr5A 92.722 371 23 2 950 1317 452243176 452243545 1.710000e-147 532
19 TraesCS3B01G420000 chr5A 96.617 266 9 0 1 266 634172274 634172009 2.960000e-120 442
20 TraesCS3B01G420000 chr5A 91.919 297 24 0 1395 1691 634170761 634170465 1.790000e-112 416
21 TraesCS3B01G420000 chr5A 94.318 264 12 2 1 263 452242054 452242315 5.020000e-108 401
22 TraesCS3B01G420000 chr5A 88.393 336 35 4 1361 1695 634170732 634170400 5.020000e-108 401
23 TraesCS3B01G420000 chr5A 88.816 304 31 3 1361 1663 634170638 634170337 1.420000e-98 370
24 TraesCS3B01G420000 chr7A 88.406 1587 137 33 950 2525 660199903 660198353 0.000000e+00 1868
25 TraesCS3B01G420000 chr7A 89.340 1379 116 18 1426 2795 287613399 287614755 0.000000e+00 1703
26 TraesCS3B01G420000 chr7A 85.979 1455 111 45 268 1663 287612233 287613653 0.000000e+00 1471
27 TraesCS3B01G420000 chr7A 90.659 728 47 8 268 977 207882727 207883451 0.000000e+00 948
28 TraesCS3B01G420000 chr7A 90.448 670 42 7 343 993 660200559 660199893 0.000000e+00 863
29 TraesCS3B01G420000 chr7A 82.549 659 87 24 950 1598 207883487 207884127 3.640000e-154 555
30 TraesCS3B01G420000 chr7A 93.939 264 13 2 1 263 207882366 207882627 2.340000e-106 396
31 TraesCS3B01G420000 chr7A 79.419 413 69 11 2823 3230 115263801 115264202 8.830000e-71 278
32 TraesCS3B01G420000 chr4B 88.968 1405 121 18 1402 2794 649665239 649663857 0.000000e+00 1705
33 TraesCS3B01G420000 chr4B 87.275 723 55 14 268 977 498932219 498932917 0.000000e+00 791
34 TraesCS3B01G420000 chr4B 79.592 441 71 10 2796 3230 586928615 586928188 6.770000e-77 298
35 TraesCS3B01G420000 chr1B 89.755 1347 110 15 1456 2794 573062386 573063712 0.000000e+00 1698
36 TraesCS3B01G420000 chr1B 89.755 1347 110 15 1456 2794 573067022 573068348 0.000000e+00 1698
37 TraesCS3B01G420000 chr5B 90.503 1253 107 10 1549 2795 486696841 486698087 0.000000e+00 1644
38 TraesCS3B01G420000 chr4A 85.694 1391 173 20 1428 2802 42775634 42777014 0.000000e+00 1443
39 TraesCS3B01G420000 chr4A 80.045 441 69 9 2796 3230 503609807 503610234 3.130000e-80 309
40 TraesCS3B01G420000 chr4A 78.588 439 79 8 2796 3230 36345725 36345298 3.170000e-70 276
41 TraesCS3B01G420000 chr3A 93.593 718 19 6 268 961 598918938 598919652 0.000000e+00 1046
42 TraesCS3B01G420000 chr3A 97.338 263 7 0 1 263 598918576 598918838 6.360000e-122 448
43 TraesCS3B01G420000 chr3A 78.182 440 82 8 2793 3228 21328616 21329045 5.310000e-68 268
44 TraesCS3B01G420000 chr3A 92.708 96 3 4 867 961 598914996 598915088 5.620000e-28 135
45 TraesCS3B01G420000 chr7B 98.099 263 5 0 1 263 705830246 705830508 2.940000e-125 459
46 TraesCS3B01G420000 chr4D 82.877 438 61 10 2796 3230 468406424 468405998 6.540000e-102 381
47 TraesCS3B01G420000 chr6D 80.706 425 66 8 2810 3230 284252183 284251771 1.870000e-82 316
48 TraesCS3B01G420000 chr3D 78.781 443 78 10 2793 3230 391244429 391244860 1.900000e-72 283
49 TraesCS3B01G420000 chr6A 81.449 345 54 5 2796 3139 491047924 491047589 1.140000e-69 274


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G420000 chr3B 656601447 656604676 3229 True 5965.000000 5965 100.000000 1 3230 1 chr3B.!!$R1 3229
1 TraesCS3B01G420000 chr3B 465041525 465044030 2505 True 1541.500000 1668 87.140000 268 2794 2 chr3B.!!$R2 2526
2 TraesCS3B01G420000 chr2B 25338400 25341397 2997 True 1180.666667 3011 91.566000 1 2790 3 chr2B.!!$R1 2789
3 TraesCS3B01G420000 chr2B 457193411 457196292 2881 False 1175.000000 1672 89.871667 1 2795 3 chr2B.!!$F1 2794
4 TraesCS3B01G420000 chr2A 748226711 748229404 2693 False 1474.000000 2547 91.098500 1 2525 2 chr2A.!!$F1 2524
5 TraesCS3B01G420000 chr2A 728780999 728782074 1075 True 671.000000 935 92.462000 1 972 2 chr2A.!!$R1 971
6 TraesCS3B01G420000 chr5A 634169239 634172274 3035 True 847.142857 2180 92.085857 1 2793 7 chr5A.!!$R1 2792
7 TraesCS3B01G420000 chr5A 452242054 452245257 3203 False 828.750000 1432 90.832750 1 2796 4 chr5A.!!$F1 2795
8 TraesCS3B01G420000 chr7A 287612233 287614755 2522 False 1587.000000 1703 87.659500 268 2795 2 chr7A.!!$F3 2527
9 TraesCS3B01G420000 chr7A 660198353 660200559 2206 True 1365.500000 1868 89.427000 343 2525 2 chr7A.!!$R1 2182
10 TraesCS3B01G420000 chr7A 207882366 207884127 1761 False 633.000000 948 89.049000 1 1598 3 chr7A.!!$F2 1597
11 TraesCS3B01G420000 chr4B 649663857 649665239 1382 True 1705.000000 1705 88.968000 1402 2794 1 chr4B.!!$R2 1392
12 TraesCS3B01G420000 chr4B 498932219 498932917 698 False 791.000000 791 87.275000 268 977 1 chr4B.!!$F1 709
13 TraesCS3B01G420000 chr1B 573062386 573068348 5962 False 1698.000000 1698 89.755000 1456 2794 2 chr1B.!!$F1 1338
14 TraesCS3B01G420000 chr5B 486696841 486698087 1246 False 1644.000000 1644 90.503000 1549 2795 1 chr5B.!!$F1 1246
15 TraesCS3B01G420000 chr4A 42775634 42777014 1380 False 1443.000000 1443 85.694000 1428 2802 1 chr4A.!!$F1 1374
16 TraesCS3B01G420000 chr3A 598914996 598919652 4656 False 543.000000 1046 94.546333 1 961 3 chr3A.!!$F2 960

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
266 3848 3.159472 TCGTGGTAGAAAGACTTAGGCA 58.841 45.455 0.0 0.0 0.00 4.75 F
1968 10960 2.094675 CCAAATCCTTGTGCGGAAGAT 58.905 47.619 0.0 0.0 36.49 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1974 10966 0.322456 ATGCAAGTATGGTGGCGTGT 60.322 50.0 0.0 0.0 0.00 4.49 R
3158 12163 0.034089 GACTACTTTGCCCATGCCCT 60.034 55.0 0.0 0.0 36.33 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 3646 7.733047 ACCCAAACCAAAATAGAAGGAAACTAT 59.267 33.333 0.00 0.00 42.68 2.12
194 3776 7.885399 ACCAAATAGGATTGTATTGGAGCTATC 59.115 37.037 9.63 0.00 41.22 2.08
266 3848 3.159472 TCGTGGTAGAAAGACTTAGGCA 58.841 45.455 0.00 0.00 0.00 4.75
540 4282 3.653344 CATTCTTCTCTTCGTGTGACCA 58.347 45.455 0.00 0.00 0.00 4.02
662 4404 6.596309 TGTTGCATTATTCACAATTGGGTA 57.404 33.333 7.75 0.00 0.00 3.69
803 4545 4.025040 AGGACTTGCTGATCAAATGTGA 57.975 40.909 0.00 0.00 38.41 3.58
1099 4982 5.355350 GGCAATAGAACAAGTACTGCATTCT 59.645 40.000 16.48 16.48 34.16 2.40
1207 5090 2.982488 AGGACATGGAAGAGGAAACTGT 59.018 45.455 0.00 0.00 44.43 3.55
1289 5172 6.560711 TGATTGTTCTTGATCATGAGCATTG 58.439 36.000 22.81 10.95 0.00 2.82
1347 5238 7.144722 TCATGAACTTACTTTGCTGTAATGG 57.855 36.000 0.00 0.00 32.76 3.16
1349 5240 6.801539 TGAACTTACTTTGCTGTAATGGAG 57.198 37.500 0.00 0.00 32.76 3.86
1351 5242 6.770785 TGAACTTACTTTGCTGTAATGGAGTT 59.229 34.615 11.69 11.69 32.76 3.01
1352 5243 7.284489 TGAACTTACTTTGCTGTAATGGAGTTT 59.716 33.333 12.49 0.00 32.76 2.66
1356 5247 5.591099 ACTTTGCTGTAATGGAGTTTTGTG 58.409 37.500 0.00 0.00 0.00 3.33
1360 5251 4.887071 TGCTGTAATGGAGTTTTGTGAAGT 59.113 37.500 0.00 0.00 0.00 3.01
1361 5252 5.008613 TGCTGTAATGGAGTTTTGTGAAGTC 59.991 40.000 0.00 0.00 0.00 3.01
1364 5255 7.397892 TGTAATGGAGTTTTGTGAAGTCAAA 57.602 32.000 0.00 0.00 35.83 2.69
1383 5274 6.207614 AGTCAAATACTTGCCTCCTTTTCTTC 59.792 38.462 0.00 0.00 33.35 2.87
1386 5277 6.388619 AATACTTGCCTCCTTTTCTTCCTA 57.611 37.500 0.00 0.00 0.00 2.94
1389 5280 6.582929 ACTTGCCTCCTTTTCTTCCTATAT 57.417 37.500 0.00 0.00 0.00 0.86
1390 5281 6.360618 ACTTGCCTCCTTTTCTTCCTATATG 58.639 40.000 0.00 0.00 0.00 1.78
1393 5284 5.103940 TGCCTCCTTTTCTTCCTATATGCTT 60.104 40.000 0.00 0.00 0.00 3.91
1414 5305 8.970691 TGCTTAAATACTTGCTGAAATTCTTC 57.029 30.769 0.00 0.00 0.00 2.87
1416 5307 9.631452 GCTTAAATACTTGCTGAAATTCTTCTT 57.369 29.630 0.00 0.00 32.33 2.52
1425 5316 8.510243 TTGCTGAAATTCTTCTTATATGCTCA 57.490 30.769 0.00 0.00 32.33 4.26
1437 5328 8.962884 TTCTTATATGCTCAAATACTTGCTGA 57.037 30.769 0.00 0.00 32.14 4.26
1469 5438 9.990360 TTTATATATGCCTCGAATACTTGTTGA 57.010 29.630 0.00 0.00 0.00 3.18
1487 5472 9.247861 ACTTGTTGAAATTCTTCCTATATGCTT 57.752 29.630 0.00 0.00 0.00 3.91
1516 5501 9.956720 ATACTTGCTGAAATTGTTTCTATATGC 57.043 29.630 4.32 0.00 40.32 3.14
1517 5502 8.059798 ACTTGCTGAAATTGTTTCTATATGCT 57.940 30.769 4.32 0.00 40.32 3.79
1537 5522 6.579666 TGCTCAAATACTTGCTGAAATTCT 57.420 33.333 0.00 0.00 32.14 2.40
1539 5524 7.086376 TGCTCAAATACTTGCTGAAATTCTTC 58.914 34.615 0.00 0.00 32.14 2.87
1540 5525 6.529477 GCTCAAATACTTGCTGAAATTCTTCC 59.471 38.462 0.00 0.00 32.14 3.46
1547 5532 7.269477 ACTTGCTGAAATTCTTCCTATATGC 57.731 36.000 0.00 0.00 0.00 3.14
1550 5535 6.594744 TGCTGAAATTCTTCCTATATGCTCA 58.405 36.000 0.00 0.00 0.00 4.26
1552 5537 7.557358 TGCTGAAATTCTTCCTATATGCTCAAA 59.443 33.333 0.00 0.00 0.00 2.69
1641 10632 7.260603 ACTTGCTGAAATTGTTTCTATATGCC 58.739 34.615 4.32 0.00 40.32 4.40
1654 10645 7.996066 TGTTTCTATATGCCCAAATACTTGCTA 59.004 33.333 0.00 0.00 0.00 3.49
1877 10868 3.884037 AGAGACAACCAAGAAACCCAT 57.116 42.857 0.00 0.00 0.00 4.00
1968 10960 2.094675 CCAAATCCTTGTGCGGAAGAT 58.905 47.619 0.00 0.00 36.49 2.40
1974 10966 3.101437 TCCTTGTGCGGAAGATAGGTTA 58.899 45.455 0.00 0.00 0.00 2.85
2148 11140 1.601903 GTTGACAATCCTCGTGTTGCA 59.398 47.619 0.00 0.00 0.00 4.08
2176 11168 5.357878 GCATTCAAGGTGTTGGAAGATGATA 59.642 40.000 0.00 0.00 34.09 2.15
2232 11224 1.421646 ACCTTTCCTGAAGTGTGAGGG 59.578 52.381 0.00 0.00 33.29 4.30
2323 11315 5.885912 TGGGTTGTATGGATTAGCTCTTTTC 59.114 40.000 0.00 0.00 0.00 2.29
2330 11323 3.751175 TGGATTAGCTCTTTTCACAACCG 59.249 43.478 0.00 0.00 0.00 4.44
2577 11579 4.665833 TTATGAGGGTAATCTCACCACG 57.334 45.455 0.00 0.00 45.27 4.94
2702 11705 4.878878 GGATAACCCTGCCCTTCG 57.121 61.111 0.00 0.00 0.00 3.79
2763 11768 0.034477 GGATACCCACAACCACCCTG 60.034 60.000 0.00 0.00 0.00 4.45
2798 11803 5.918576 GCAACCAAACACATCCTAAGTAAAC 59.081 40.000 0.00 0.00 0.00 2.01
2802 11807 5.183140 CCAAACACATCCTAAGTAAACCTGG 59.817 44.000 0.00 0.00 0.00 4.45
2803 11808 3.951663 ACACATCCTAAGTAAACCTGGC 58.048 45.455 0.00 0.00 0.00 4.85
2804 11809 3.279434 CACATCCTAAGTAAACCTGGCC 58.721 50.000 0.00 0.00 0.00 5.36
2805 11810 2.916934 ACATCCTAAGTAAACCTGGCCA 59.083 45.455 4.71 4.71 0.00 5.36
2806 11811 3.279434 CATCCTAAGTAAACCTGGCCAC 58.721 50.000 0.00 0.00 0.00 5.01
2807 11812 1.631898 TCCTAAGTAAACCTGGCCACC 59.368 52.381 0.00 0.00 0.00 4.61
2808 11813 1.353022 CCTAAGTAAACCTGGCCACCA 59.647 52.381 0.00 0.00 0.00 4.17
2809 11814 2.025321 CCTAAGTAAACCTGGCCACCAT 60.025 50.000 0.00 0.00 30.82 3.55
2810 11815 2.215942 AAGTAAACCTGGCCACCATC 57.784 50.000 0.00 0.00 30.82 3.51
2811 11816 1.372501 AGTAAACCTGGCCACCATCT 58.627 50.000 0.00 0.00 30.82 2.90
2812 11817 1.710809 AGTAAACCTGGCCACCATCTT 59.289 47.619 0.00 0.00 30.82 2.40
2813 11818 1.818674 GTAAACCTGGCCACCATCTTG 59.181 52.381 0.00 0.00 30.82 3.02
2814 11819 1.187567 AAACCTGGCCACCATCTTGC 61.188 55.000 0.00 0.00 30.82 4.01
2815 11820 2.085343 AACCTGGCCACCATCTTGCT 62.085 55.000 0.00 0.00 30.82 3.91
2816 11821 1.304713 CCTGGCCACCATCTTGCTT 60.305 57.895 0.00 0.00 30.82 3.91
2817 11822 1.318158 CCTGGCCACCATCTTGCTTC 61.318 60.000 0.00 0.00 30.82 3.86
2818 11823 0.609957 CTGGCCACCATCTTGCTTCA 60.610 55.000 0.00 0.00 30.82 3.02
2819 11824 0.178967 TGGCCACCATCTTGCTTCAA 60.179 50.000 0.00 0.00 0.00 2.69
2820 11825 0.968405 GGCCACCATCTTGCTTCAAA 59.032 50.000 0.00 0.00 0.00 2.69
2821 11826 1.337167 GGCCACCATCTTGCTTCAAAC 60.337 52.381 0.00 0.00 0.00 2.93
2822 11827 1.340889 GCCACCATCTTGCTTCAAACA 59.659 47.619 0.00 0.00 0.00 2.83
2823 11828 2.028748 GCCACCATCTTGCTTCAAACAT 60.029 45.455 0.00 0.00 0.00 2.71
2824 11829 3.555586 GCCACCATCTTGCTTCAAACATT 60.556 43.478 0.00 0.00 0.00 2.71
2825 11830 3.991773 CCACCATCTTGCTTCAAACATTG 59.008 43.478 0.00 0.00 0.00 2.82
2826 11831 3.430895 CACCATCTTGCTTCAAACATTGC 59.569 43.478 0.00 0.00 0.00 3.56
2827 11832 3.322828 ACCATCTTGCTTCAAACATTGCT 59.677 39.130 0.00 0.00 0.00 3.91
2828 11833 4.523943 ACCATCTTGCTTCAAACATTGCTA 59.476 37.500 0.00 0.00 0.00 3.49
2829 11834 5.100259 CCATCTTGCTTCAAACATTGCTAG 58.900 41.667 0.00 0.00 0.00 3.42
2830 11835 4.771590 TCTTGCTTCAAACATTGCTAGG 57.228 40.909 0.00 0.00 0.00 3.02
2831 11836 4.397420 TCTTGCTTCAAACATTGCTAGGA 58.603 39.130 0.00 0.00 0.00 2.94
2832 11837 5.012239 TCTTGCTTCAAACATTGCTAGGAT 58.988 37.500 0.00 0.00 0.00 3.24
2833 11838 6.179756 TCTTGCTTCAAACATTGCTAGGATA 58.820 36.000 0.00 0.00 0.00 2.59
2834 11839 5.818136 TGCTTCAAACATTGCTAGGATAC 57.182 39.130 0.00 0.00 0.00 2.24
2850 11855 3.851098 GGATACTCTTGGTGTCTGTGAC 58.149 50.000 0.00 0.00 36.49 3.67
2851 11856 3.258372 GGATACTCTTGGTGTCTGTGACA 59.742 47.826 0.00 0.00 40.50 3.58
2852 11857 2.898729 ACTCTTGGTGTCTGTGACAG 57.101 50.000 6.18 6.18 43.57 3.51
2853 11858 2.111384 ACTCTTGGTGTCTGTGACAGT 58.889 47.619 12.93 0.00 43.57 3.55
2854 11859 2.501723 ACTCTTGGTGTCTGTGACAGTT 59.498 45.455 12.93 0.00 43.57 3.16
2855 11860 2.868583 CTCTTGGTGTCTGTGACAGTTG 59.131 50.000 12.93 0.00 43.57 3.16
2856 11861 2.499693 TCTTGGTGTCTGTGACAGTTGA 59.500 45.455 12.93 0.00 43.57 3.18
2857 11862 3.134623 TCTTGGTGTCTGTGACAGTTGAT 59.865 43.478 12.93 0.00 43.57 2.57
2858 11863 3.558931 TGGTGTCTGTGACAGTTGATT 57.441 42.857 12.93 0.00 43.57 2.57
2859 11864 3.466836 TGGTGTCTGTGACAGTTGATTC 58.533 45.455 12.93 0.25 43.57 2.52
2860 11865 3.134623 TGGTGTCTGTGACAGTTGATTCT 59.865 43.478 12.93 0.00 43.57 2.40
2861 11866 3.743396 GGTGTCTGTGACAGTTGATTCTC 59.257 47.826 12.93 0.00 43.57 2.87
2862 11867 4.502259 GGTGTCTGTGACAGTTGATTCTCT 60.502 45.833 12.93 0.00 43.57 3.10
2863 11868 4.683781 GTGTCTGTGACAGTTGATTCTCTC 59.316 45.833 12.93 0.00 43.57 3.20
2864 11869 4.342092 TGTCTGTGACAGTTGATTCTCTCA 59.658 41.667 12.93 0.00 37.67 3.27
2865 11870 5.163416 TGTCTGTGACAGTTGATTCTCTCAA 60.163 40.000 12.93 0.00 38.34 3.02
2866 11871 5.404968 GTCTGTGACAGTTGATTCTCTCAAG 59.595 44.000 12.93 0.00 37.23 3.02
2867 11872 5.069648 TCTGTGACAGTTGATTCTCTCAAGT 59.930 40.000 12.93 0.00 46.35 3.16
2868 11873 6.265422 TCTGTGACAGTTGATTCTCTCAAGTA 59.735 38.462 12.93 0.00 44.12 2.24
2869 11874 6.216569 TGTGACAGTTGATTCTCTCAAGTAC 58.783 40.000 0.00 0.00 44.12 2.73
2870 11875 6.040955 TGTGACAGTTGATTCTCTCAAGTACT 59.959 38.462 0.00 0.00 44.12 2.73
2871 11876 6.364706 GTGACAGTTGATTCTCTCAAGTACTG 59.635 42.308 0.00 0.00 44.12 2.74
2872 11877 6.265422 TGACAGTTGATTCTCTCAAGTACTGA 59.735 38.462 0.00 0.00 44.12 3.41
2881 11886 3.667497 CTCAAGTACTGAGTCCAAGCA 57.333 47.619 0.00 0.00 45.76 3.91
2882 11887 3.321497 CTCAAGTACTGAGTCCAAGCAC 58.679 50.000 0.00 0.00 45.76 4.40
2883 11888 2.037251 TCAAGTACTGAGTCCAAGCACC 59.963 50.000 0.00 0.00 0.00 5.01
2884 11889 0.603569 AGTACTGAGTCCAAGCACCG 59.396 55.000 0.00 0.00 0.00 4.94
2885 11890 0.601558 GTACTGAGTCCAAGCACCGA 59.398 55.000 0.00 0.00 0.00 4.69
2886 11891 0.888619 TACTGAGTCCAAGCACCGAG 59.111 55.000 0.00 0.00 0.00 4.63
2887 11892 0.827925 ACTGAGTCCAAGCACCGAGA 60.828 55.000 0.00 0.00 0.00 4.04
2888 11893 0.389166 CTGAGTCCAAGCACCGAGAC 60.389 60.000 0.00 0.00 0.00 3.36
2889 11894 1.079750 GAGTCCAAGCACCGAGACC 60.080 63.158 0.00 0.00 0.00 3.85
2890 11895 1.816863 GAGTCCAAGCACCGAGACCA 61.817 60.000 0.00 0.00 0.00 4.02
2891 11896 1.668151 GTCCAAGCACCGAGACCAC 60.668 63.158 0.00 0.00 0.00 4.16
2892 11897 2.738521 CCAAGCACCGAGACCACG 60.739 66.667 0.00 0.00 0.00 4.94
2893 11898 2.338620 CAAGCACCGAGACCACGA 59.661 61.111 0.00 0.00 35.09 4.35
2894 11899 2.022129 CAAGCACCGAGACCACGAC 61.022 63.158 0.00 0.00 35.09 4.34
2895 11900 2.495409 AAGCACCGAGACCACGACA 61.495 57.895 0.00 0.00 35.09 4.35
2896 11901 2.421877 AAGCACCGAGACCACGACAG 62.422 60.000 0.00 0.00 35.09 3.51
2897 11902 3.039988 CACCGAGACCACGACAGT 58.960 61.111 0.00 0.00 35.09 3.55
2898 11903 1.859427 GCACCGAGACCACGACAGTA 61.859 60.000 0.00 0.00 35.09 2.74
2899 11904 0.168348 CACCGAGACCACGACAGTAG 59.832 60.000 0.00 0.00 35.09 2.57
2900 11905 1.136984 CCGAGACCACGACAGTAGC 59.863 63.158 0.00 0.00 35.09 3.58
2901 11906 1.306642 CCGAGACCACGACAGTAGCT 61.307 60.000 0.00 0.00 35.09 3.32
2902 11907 1.366679 CGAGACCACGACAGTAGCTA 58.633 55.000 0.00 0.00 35.09 3.32
2903 11908 1.328069 CGAGACCACGACAGTAGCTAG 59.672 57.143 0.00 0.00 35.09 3.42
2904 11909 2.358015 GAGACCACGACAGTAGCTAGT 58.642 52.381 0.00 0.00 0.00 2.57
2905 11910 3.529533 GAGACCACGACAGTAGCTAGTA 58.470 50.000 0.00 0.00 0.00 1.82
2906 11911 3.533547 AGACCACGACAGTAGCTAGTAG 58.466 50.000 0.00 0.00 0.00 2.57
2907 11912 2.015587 ACCACGACAGTAGCTAGTAGC 58.984 52.381 14.62 14.62 42.84 3.58
2908 11913 2.014857 CCACGACAGTAGCTAGTAGCA 58.985 52.381 23.77 7.49 45.56 3.49
2909 11914 2.422479 CCACGACAGTAGCTAGTAGCAA 59.578 50.000 23.77 0.00 45.56 3.91
2910 11915 3.119602 CCACGACAGTAGCTAGTAGCAAA 60.120 47.826 23.77 8.91 45.56 3.68
2911 11916 4.440250 CCACGACAGTAGCTAGTAGCAAAT 60.440 45.833 23.77 6.28 45.56 2.32
2912 11917 4.735822 CACGACAGTAGCTAGTAGCAAATC 59.264 45.833 23.77 12.07 45.56 2.17
2913 11918 4.641094 ACGACAGTAGCTAGTAGCAAATCT 59.359 41.667 23.77 12.45 45.56 2.40
2914 11919 5.125739 ACGACAGTAGCTAGTAGCAAATCTT 59.874 40.000 23.77 4.80 45.56 2.40
2915 11920 6.318144 ACGACAGTAGCTAGTAGCAAATCTTA 59.682 38.462 23.77 3.80 45.56 2.10
2916 11921 6.633634 CGACAGTAGCTAGTAGCAAATCTTAC 59.366 42.308 23.77 15.12 45.56 2.34
2917 11922 6.807789 ACAGTAGCTAGTAGCAAATCTTACC 58.192 40.000 23.77 2.66 45.56 2.85
2918 11923 6.380274 ACAGTAGCTAGTAGCAAATCTTACCA 59.620 38.462 23.77 0.00 45.56 3.25
2919 11924 7.070074 ACAGTAGCTAGTAGCAAATCTTACCAT 59.930 37.037 23.77 5.18 45.56 3.55
2920 11925 7.928706 CAGTAGCTAGTAGCAAATCTTACCATT 59.071 37.037 23.77 1.18 45.56 3.16
2921 11926 7.928706 AGTAGCTAGTAGCAAATCTTACCATTG 59.071 37.037 23.77 0.00 45.56 2.82
2922 11927 5.529060 AGCTAGTAGCAAATCTTACCATTGC 59.471 40.000 23.77 1.68 45.56 3.56
2930 11935 6.385033 GCAAATCTTACCATTGCATATCTCC 58.615 40.000 4.96 0.00 46.57 3.71
2931 11936 6.605849 CAAATCTTACCATTGCATATCTCCG 58.394 40.000 0.00 0.00 0.00 4.63
2932 11937 3.664107 TCTTACCATTGCATATCTCCGC 58.336 45.455 0.00 0.00 0.00 5.54
2933 11938 3.070878 TCTTACCATTGCATATCTCCGCA 59.929 43.478 0.00 0.00 36.05 5.69
2934 11939 1.597742 ACCATTGCATATCTCCGCAC 58.402 50.000 0.00 0.00 38.00 5.34
2935 11940 1.141657 ACCATTGCATATCTCCGCACT 59.858 47.619 0.00 0.00 38.00 4.40
2936 11941 2.224606 CCATTGCATATCTCCGCACTT 58.775 47.619 0.00 0.00 38.00 3.16
2937 11942 2.031420 CCATTGCATATCTCCGCACTTG 60.031 50.000 0.00 0.00 38.00 3.16
2938 11943 1.016627 TTGCATATCTCCGCACTTGC 58.983 50.000 0.00 0.00 38.00 4.01
2939 11944 0.178767 TGCATATCTCCGCACTTGCT 59.821 50.000 0.00 0.00 39.32 3.91
2940 11945 0.864455 GCATATCTCCGCACTTGCTC 59.136 55.000 0.00 0.00 39.32 4.26
2941 11946 1.539929 GCATATCTCCGCACTTGCTCT 60.540 52.381 0.00 0.00 39.32 4.09
2942 11947 2.831333 CATATCTCCGCACTTGCTCTT 58.169 47.619 0.00 0.00 39.32 2.85
2943 11948 3.800261 GCATATCTCCGCACTTGCTCTTA 60.800 47.826 0.00 0.00 39.32 2.10
2944 11949 2.593346 ATCTCCGCACTTGCTCTTAG 57.407 50.000 0.00 0.00 39.32 2.18
2945 11950 1.545841 TCTCCGCACTTGCTCTTAGA 58.454 50.000 0.00 0.00 39.32 2.10
2946 11951 1.202582 TCTCCGCACTTGCTCTTAGAC 59.797 52.381 0.00 0.00 39.32 2.59
2947 11952 0.966179 TCCGCACTTGCTCTTAGACA 59.034 50.000 0.00 0.00 39.32 3.41
2948 11953 1.550524 TCCGCACTTGCTCTTAGACAT 59.449 47.619 0.00 0.00 39.32 3.06
2949 11954 1.929836 CCGCACTTGCTCTTAGACATC 59.070 52.381 0.00 0.00 39.32 3.06
2950 11955 1.929836 CGCACTTGCTCTTAGACATCC 59.070 52.381 0.00 0.00 39.32 3.51
2951 11956 1.929836 GCACTTGCTCTTAGACATCCG 59.070 52.381 0.00 0.00 38.21 4.18
2952 11957 2.675317 GCACTTGCTCTTAGACATCCGT 60.675 50.000 0.00 0.00 38.21 4.69
2953 11958 3.428999 GCACTTGCTCTTAGACATCCGTA 60.429 47.826 0.00 0.00 38.21 4.02
2954 11959 4.355437 CACTTGCTCTTAGACATCCGTAG 58.645 47.826 0.00 0.00 0.00 3.51
2973 11978 5.775686 CGTAGGTATTCGTCCCATTAATCA 58.224 41.667 0.00 0.00 0.00 2.57
2974 11979 5.862323 CGTAGGTATTCGTCCCATTAATCAG 59.138 44.000 0.00 0.00 0.00 2.90
2975 11980 5.888982 AGGTATTCGTCCCATTAATCAGT 57.111 39.130 0.00 0.00 0.00 3.41
2976 11981 5.611374 AGGTATTCGTCCCATTAATCAGTG 58.389 41.667 0.00 0.00 0.00 3.66
2977 11982 4.755123 GGTATTCGTCCCATTAATCAGTGG 59.245 45.833 0.00 0.00 35.22 4.00
2978 11983 3.992943 TTCGTCCCATTAATCAGTGGT 57.007 42.857 0.00 0.00 33.55 4.16
2979 11984 3.992943 TCGTCCCATTAATCAGTGGTT 57.007 42.857 0.00 0.00 33.55 3.67
2980 11985 3.605634 TCGTCCCATTAATCAGTGGTTG 58.394 45.455 0.00 0.00 33.55 3.77
2981 11986 3.008594 TCGTCCCATTAATCAGTGGTTGT 59.991 43.478 0.00 0.00 33.55 3.32
2982 11987 3.126858 CGTCCCATTAATCAGTGGTTGTG 59.873 47.826 0.00 0.00 33.55 3.33
2983 11988 3.088532 TCCCATTAATCAGTGGTTGTGC 58.911 45.455 0.00 0.00 33.55 4.57
2984 11989 2.166254 CCCATTAATCAGTGGTTGTGCC 59.834 50.000 0.00 0.00 33.55 5.01
2985 11990 2.824936 CCATTAATCAGTGGTTGTGCCA 59.175 45.455 0.00 0.00 46.95 4.92
2999 12004 3.272334 GCCATACGCAAGCCTCCG 61.272 66.667 0.00 0.00 45.62 4.63
3000 12005 2.186903 CCATACGCAAGCCTCCGT 59.813 61.111 0.00 0.00 45.62 4.69
3001 12006 1.440060 CCATACGCAAGCCTCCGTA 59.560 57.895 3.37 3.37 43.10 4.02
3002 12007 0.597637 CCATACGCAAGCCTCCGTAG 60.598 60.000 6.52 0.79 42.34 3.51
3003 12008 0.102481 CATACGCAAGCCTCCGTAGT 59.898 55.000 6.52 0.00 42.34 2.73
3004 12009 0.102481 ATACGCAAGCCTCCGTAGTG 59.898 55.000 6.52 0.00 42.34 2.74
3005 12010 2.552585 TACGCAAGCCTCCGTAGTGC 62.553 60.000 0.00 0.00 45.62 4.40
3006 12011 3.188786 GCAAGCCTCCGTAGTGCG 61.189 66.667 0.00 0.00 40.95 5.34
3015 12020 3.475774 CGTAGTGCGGCCGTTCAC 61.476 66.667 28.70 25.68 36.85 3.18
3016 12021 2.048503 GTAGTGCGGCCGTTCACT 60.049 61.111 31.86 31.86 44.76 3.41
3017 12022 1.666872 GTAGTGCGGCCGTTCACTT 60.667 57.895 33.53 21.37 42.81 3.16
3018 12023 1.373748 TAGTGCGGCCGTTCACTTC 60.374 57.895 33.53 15.42 42.81 3.01
3019 12024 1.812686 TAGTGCGGCCGTTCACTTCT 61.813 55.000 33.53 18.45 42.81 2.85
3020 12025 1.373748 GTGCGGCCGTTCACTTCTA 60.374 57.895 28.70 0.00 0.00 2.10
3021 12026 1.080093 TGCGGCCGTTCACTTCTAG 60.080 57.895 28.70 0.00 0.00 2.43
3022 12027 1.080025 GCGGCCGTTCACTTCTAGT 60.080 57.895 28.70 0.00 0.00 2.57
3023 12028 0.171903 GCGGCCGTTCACTTCTAGTA 59.828 55.000 28.70 0.00 0.00 1.82
3024 12029 1.403249 GCGGCCGTTCACTTCTAGTAA 60.403 52.381 28.70 0.00 0.00 2.24
3025 12030 2.257034 CGGCCGTTCACTTCTAGTAAC 58.743 52.381 19.50 0.00 0.00 2.50
3026 12031 2.094854 CGGCCGTTCACTTCTAGTAACT 60.095 50.000 19.50 0.00 0.00 2.24
3027 12032 3.127548 CGGCCGTTCACTTCTAGTAACTA 59.872 47.826 19.50 0.00 0.00 2.24
3028 12033 4.670347 GGCCGTTCACTTCTAGTAACTAG 58.330 47.826 0.00 0.00 35.57 2.57
3029 12034 4.397417 GGCCGTTCACTTCTAGTAACTAGA 59.603 45.833 0.00 0.00 40.78 2.43
3030 12035 5.448904 GGCCGTTCACTTCTAGTAACTAGAG 60.449 48.000 0.00 0.00 42.92 2.43
3031 12036 5.353678 GCCGTTCACTTCTAGTAACTAGAGA 59.646 44.000 0.00 0.00 42.92 3.10
3032 12037 6.128063 GCCGTTCACTTCTAGTAACTAGAGAA 60.128 42.308 0.00 0.00 42.92 2.87
3033 12038 7.242783 CCGTTCACTTCTAGTAACTAGAGAAC 58.757 42.308 4.55 4.55 42.92 3.01
3034 12039 7.242783 CGTTCACTTCTAGTAACTAGAGAACC 58.757 42.308 6.78 0.00 42.92 3.62
3035 12040 7.537715 GTTCACTTCTAGTAACTAGAGAACCC 58.462 42.308 3.91 0.00 42.92 4.11
3036 12041 6.787170 TCACTTCTAGTAACTAGAGAACCCA 58.213 40.000 0.00 0.00 42.92 4.51
3037 12042 7.236529 TCACTTCTAGTAACTAGAGAACCCAA 58.763 38.462 0.00 0.00 42.92 4.12
3038 12043 7.894364 TCACTTCTAGTAACTAGAGAACCCAAT 59.106 37.037 0.00 0.00 42.92 3.16
3039 12044 8.192110 CACTTCTAGTAACTAGAGAACCCAATC 58.808 40.741 0.00 0.00 42.92 2.67
3040 12045 7.342541 ACTTCTAGTAACTAGAGAACCCAATCC 59.657 40.741 0.00 0.00 42.92 3.01
3041 12046 6.982899 TCTAGTAACTAGAGAACCCAATCCT 58.017 40.000 0.00 0.00 38.06 3.24
3042 12047 7.420029 TCTAGTAACTAGAGAACCCAATCCTT 58.580 38.462 0.00 0.00 38.06 3.36
3043 12048 6.547930 AGTAACTAGAGAACCCAATCCTTC 57.452 41.667 0.00 0.00 0.00 3.46
3044 12049 4.846168 AACTAGAGAACCCAATCCTTCC 57.154 45.455 0.00 0.00 0.00 3.46
3045 12050 3.116174 ACTAGAGAACCCAATCCTTCCC 58.884 50.000 0.00 0.00 0.00 3.97
3046 12051 2.059756 AGAGAACCCAATCCTTCCCA 57.940 50.000 0.00 0.00 0.00 4.37
3047 12052 2.577970 AGAGAACCCAATCCTTCCCAT 58.422 47.619 0.00 0.00 0.00 4.00
3048 12053 2.243221 AGAGAACCCAATCCTTCCCATG 59.757 50.000 0.00 0.00 0.00 3.66
3049 12054 1.288932 AGAACCCAATCCTTCCCATGG 59.711 52.381 4.14 4.14 0.00 3.66
3050 12055 0.325577 AACCCAATCCTTCCCATGGC 60.326 55.000 6.09 0.00 0.00 4.40
3051 12056 1.310715 CCCAATCCTTCCCATGGCA 59.689 57.895 6.09 0.00 0.00 4.92
3052 12057 0.105349 CCCAATCCTTCCCATGGCAT 60.105 55.000 6.09 0.00 0.00 4.40
3053 12058 1.335145 CCAATCCTTCCCATGGCATC 58.665 55.000 6.09 0.00 0.00 3.91
3054 12059 1.335145 CAATCCTTCCCATGGCATCC 58.665 55.000 6.09 0.00 0.00 3.51
3055 12060 1.133262 CAATCCTTCCCATGGCATCCT 60.133 52.381 6.09 0.00 0.00 3.24
3056 12061 1.238615 ATCCTTCCCATGGCATCCTT 58.761 50.000 6.09 0.00 0.00 3.36
3057 12062 0.552848 TCCTTCCCATGGCATCCTTC 59.447 55.000 6.09 0.00 0.00 3.46
3058 12063 0.554792 CCTTCCCATGGCATCCTTCT 59.445 55.000 6.09 0.00 0.00 2.85
3059 12064 1.063417 CCTTCCCATGGCATCCTTCTT 60.063 52.381 6.09 0.00 0.00 2.52
3060 12065 2.305009 CTTCCCATGGCATCCTTCTTC 58.695 52.381 6.09 0.00 0.00 2.87
3061 12066 1.297968 TCCCATGGCATCCTTCTTCA 58.702 50.000 6.09 0.00 0.00 3.02
3062 12067 1.640149 TCCCATGGCATCCTTCTTCAA 59.360 47.619 6.09 0.00 0.00 2.69
3063 12068 2.029623 CCCATGGCATCCTTCTTCAAG 58.970 52.381 6.09 0.00 0.00 3.02
3064 12069 2.357465 CCCATGGCATCCTTCTTCAAGA 60.357 50.000 6.09 0.00 0.00 3.02
3065 12070 3.563223 CCATGGCATCCTTCTTCAAGAT 58.437 45.455 0.00 0.00 0.00 2.40
3066 12071 3.318275 CCATGGCATCCTTCTTCAAGATG 59.682 47.826 0.00 0.00 0.00 2.90
3067 12072 4.204799 CATGGCATCCTTCTTCAAGATGA 58.795 43.478 0.00 0.00 0.00 2.92
3068 12073 4.305539 TGGCATCCTTCTTCAAGATGAA 57.694 40.909 1.79 0.00 34.79 2.57
3087 12092 5.011090 TGAAGTAGTCATCAAAGGATCGG 57.989 43.478 0.00 0.00 0.00 4.18
3088 12093 4.709886 TGAAGTAGTCATCAAAGGATCGGA 59.290 41.667 0.00 0.00 0.00 4.55
3089 12094 4.657436 AGTAGTCATCAAAGGATCGGAC 57.343 45.455 0.00 0.00 30.44 4.79
3090 12095 2.586258 AGTCATCAAAGGATCGGACG 57.414 50.000 0.00 0.00 33.75 4.79
3091 12096 0.931005 GTCATCAAAGGATCGGACGC 59.069 55.000 0.00 0.00 0.00 5.19
3092 12097 0.179084 TCATCAAAGGATCGGACGCC 60.179 55.000 0.00 0.00 0.00 5.68
3093 12098 0.461870 CATCAAAGGATCGGACGCCA 60.462 55.000 2.09 0.00 0.00 5.69
3094 12099 0.462047 ATCAAAGGATCGGACGCCAC 60.462 55.000 2.09 0.00 0.00 5.01
3095 12100 2.125673 AAAGGATCGGACGCCACG 60.126 61.111 2.09 0.00 0.00 4.94
3096 12101 3.659089 AAAGGATCGGACGCCACGG 62.659 63.158 2.09 0.00 0.00 4.94
3098 12103 3.520862 GGATCGGACGCCACGGTA 61.521 66.667 0.00 0.00 0.00 4.02
3099 12104 2.025727 GATCGGACGCCACGGTAG 59.974 66.667 0.00 0.00 0.00 3.18
3100 12105 2.438975 ATCGGACGCCACGGTAGA 60.439 61.111 0.00 0.00 0.00 2.59
3101 12106 2.389866 GATCGGACGCCACGGTAGAG 62.390 65.000 0.00 0.00 0.00 2.43
3102 12107 2.881539 ATCGGACGCCACGGTAGAGA 62.882 60.000 0.00 0.00 0.00 3.10
3103 12108 2.488820 GGACGCCACGGTAGAGAC 59.511 66.667 0.00 0.00 0.00 3.36
3104 12109 2.099831 GACGCCACGGTAGAGACG 59.900 66.667 0.00 0.00 37.36 4.18
3105 12110 2.359107 ACGCCACGGTAGAGACGA 60.359 61.111 0.00 0.00 34.93 4.20
3106 12111 2.099831 CGCCACGGTAGAGACGAC 59.900 66.667 0.00 0.00 34.93 4.34
3107 12112 2.488820 GCCACGGTAGAGACGACC 59.511 66.667 0.00 0.00 34.93 4.79
3114 12119 1.446907 GGTAGAGACGACCGAAGACA 58.553 55.000 0.00 0.00 0.00 3.41
3115 12120 2.015587 GGTAGAGACGACCGAAGACAT 58.984 52.381 0.00 0.00 0.00 3.06
3116 12121 2.422832 GGTAGAGACGACCGAAGACATT 59.577 50.000 0.00 0.00 0.00 2.71
3117 12122 3.119566 GGTAGAGACGACCGAAGACATTT 60.120 47.826 0.00 0.00 0.00 2.32
3118 12123 3.662247 AGAGACGACCGAAGACATTTT 57.338 42.857 0.00 0.00 0.00 1.82
3119 12124 3.991367 AGAGACGACCGAAGACATTTTT 58.009 40.909 0.00 0.00 0.00 1.94
3136 12141 2.147436 TTTTCACATCCAAAAGCGGC 57.853 45.000 0.00 0.00 0.00 6.53
3137 12142 0.039617 TTTCACATCCAAAAGCGGCG 60.040 50.000 0.51 0.51 0.00 6.46
3138 12143 1.861542 TTCACATCCAAAAGCGGCGG 61.862 55.000 9.78 0.00 0.00 6.13
3139 12144 2.282180 ACATCCAAAAGCGGCGGT 60.282 55.556 5.44 5.44 0.00 5.68
3140 12145 2.179018 CATCCAAAAGCGGCGGTG 59.821 61.111 14.17 0.00 0.00 4.94
3141 12146 2.033448 ATCCAAAAGCGGCGGTGA 59.967 55.556 14.17 5.73 0.00 4.02
3142 12147 1.602323 ATCCAAAAGCGGCGGTGAA 60.602 52.632 14.17 0.00 0.00 3.18
3143 12148 0.965363 ATCCAAAAGCGGCGGTGAAT 60.965 50.000 14.17 0.00 0.00 2.57
3144 12149 1.175983 TCCAAAAGCGGCGGTGAATT 61.176 50.000 14.17 5.75 0.00 2.17
3145 12150 0.319469 CCAAAAGCGGCGGTGAATTT 60.319 50.000 14.17 6.92 0.00 1.82
3146 12151 1.496934 CAAAAGCGGCGGTGAATTTT 58.503 45.000 14.17 6.50 0.00 1.82
3147 12152 1.864082 CAAAAGCGGCGGTGAATTTTT 59.136 42.857 14.17 6.08 0.00 1.94
3167 12172 4.751767 TTTTTAGCAAATAGGGCATGGG 57.248 40.909 0.00 0.00 0.00 4.00
3168 12173 1.703411 TTAGCAAATAGGGCATGGGC 58.297 50.000 0.00 0.00 40.13 5.36
3169 12174 0.555280 TAGCAAATAGGGCATGGGCA 59.445 50.000 0.00 0.00 43.71 5.36
3170 12175 0.325484 AGCAAATAGGGCATGGGCAA 60.325 50.000 0.00 0.00 43.71 4.52
3171 12176 0.540923 GCAAATAGGGCATGGGCAAA 59.459 50.000 0.00 0.00 43.71 3.68
3172 12177 1.473788 GCAAATAGGGCATGGGCAAAG 60.474 52.381 0.00 0.00 43.71 2.77
3173 12178 1.832998 CAAATAGGGCATGGGCAAAGT 59.167 47.619 0.00 0.00 43.71 2.66
3174 12179 3.030291 CAAATAGGGCATGGGCAAAGTA 58.970 45.455 0.00 0.00 43.71 2.24
3175 12180 2.664402 ATAGGGCATGGGCAAAGTAG 57.336 50.000 0.00 0.00 43.71 2.57
3176 12181 1.295020 TAGGGCATGGGCAAAGTAGT 58.705 50.000 0.00 0.00 43.71 2.73
3177 12182 0.034089 AGGGCATGGGCAAAGTAGTC 60.034 55.000 0.00 0.00 43.71 2.59
3178 12183 1.376609 GGGCATGGGCAAAGTAGTCG 61.377 60.000 0.00 0.00 43.71 4.18
3179 12184 0.676782 GGCATGGGCAAAGTAGTCGT 60.677 55.000 0.00 0.00 43.71 4.34
3180 12185 0.727398 GCATGGGCAAAGTAGTCGTC 59.273 55.000 0.00 0.00 40.72 4.20
3181 12186 1.369625 CATGGGCAAAGTAGTCGTCC 58.630 55.000 0.00 0.00 0.00 4.79
3182 12187 0.981183 ATGGGCAAAGTAGTCGTCCA 59.019 50.000 0.00 0.00 0.00 4.02
3183 12188 0.981183 TGGGCAAAGTAGTCGTCCAT 59.019 50.000 0.00 0.00 0.00 3.41
3184 12189 1.066430 TGGGCAAAGTAGTCGTCCATC 60.066 52.381 0.00 0.00 0.00 3.51
3185 12190 1.066430 GGGCAAAGTAGTCGTCCATCA 60.066 52.381 0.00 0.00 0.00 3.07
3186 12191 2.614481 GGGCAAAGTAGTCGTCCATCAA 60.614 50.000 0.00 0.00 0.00 2.57
3187 12192 2.415512 GGCAAAGTAGTCGTCCATCAAC 59.584 50.000 0.00 0.00 0.00 3.18
3188 12193 2.092211 GCAAAGTAGTCGTCCATCAACG 59.908 50.000 0.00 0.00 43.92 4.10
3189 12194 3.314553 CAAAGTAGTCGTCCATCAACGT 58.685 45.455 0.00 0.00 43.08 3.99
3190 12195 4.478699 CAAAGTAGTCGTCCATCAACGTA 58.521 43.478 0.00 0.00 43.08 3.57
3191 12196 4.771590 AAGTAGTCGTCCATCAACGTAA 57.228 40.909 0.00 0.00 43.08 3.18
3192 12197 4.771590 AGTAGTCGTCCATCAACGTAAA 57.228 40.909 0.00 0.00 43.08 2.01
3193 12198 5.125100 AGTAGTCGTCCATCAACGTAAAA 57.875 39.130 0.00 0.00 43.08 1.52
3194 12199 5.717119 AGTAGTCGTCCATCAACGTAAAAT 58.283 37.500 0.00 0.00 43.08 1.82
3195 12200 4.921470 AGTCGTCCATCAACGTAAAATG 57.079 40.909 0.00 0.00 43.08 2.32
3196 12201 3.682858 AGTCGTCCATCAACGTAAAATGG 59.317 43.478 14.51 14.51 43.08 3.16
3197 12202 3.434299 GTCGTCCATCAACGTAAAATGGT 59.566 43.478 18.12 0.00 43.08 3.55
3198 12203 4.626604 GTCGTCCATCAACGTAAAATGGTA 59.373 41.667 18.12 7.36 43.08 3.25
3199 12204 5.120519 GTCGTCCATCAACGTAAAATGGTAA 59.879 40.000 18.12 7.21 43.08 2.85
3200 12205 5.120519 TCGTCCATCAACGTAAAATGGTAAC 59.879 40.000 18.12 11.79 43.08 2.50
3201 12206 5.318349 GTCCATCAACGTAAAATGGTAACG 58.682 41.667 18.12 0.00 40.69 3.18
3207 12212 3.799137 CGTAAAATGGTAACGTGCACT 57.201 42.857 16.19 0.00 42.51 4.40
3208 12213 4.907188 CGTAAAATGGTAACGTGCACTA 57.093 40.909 16.19 0.00 42.51 2.74
3209 12214 5.459110 CGTAAAATGGTAACGTGCACTAT 57.541 39.130 16.19 5.86 42.51 2.12
3210 12215 5.860641 CGTAAAATGGTAACGTGCACTATT 58.139 37.500 16.19 11.59 42.51 1.73
3211 12216 6.991655 CGTAAAATGGTAACGTGCACTATTA 58.008 36.000 16.19 10.56 42.51 0.98
3212 12217 6.896088 CGTAAAATGGTAACGTGCACTATTAC 59.104 38.462 23.01 23.01 42.51 1.89
3213 12218 6.804770 AAAATGGTAACGTGCACTATTACA 57.195 33.333 28.04 19.61 42.51 2.41
3214 12219 6.417191 AAATGGTAACGTGCACTATTACAG 57.583 37.500 28.04 11.95 42.51 2.74
3215 12220 4.524316 TGGTAACGTGCACTATTACAGT 57.476 40.909 28.04 12.49 42.51 3.55
3216 12221 4.885413 TGGTAACGTGCACTATTACAGTT 58.115 39.130 28.04 19.73 42.51 3.16
3217 12222 4.687018 TGGTAACGTGCACTATTACAGTTG 59.313 41.667 28.04 10.19 42.51 3.16
3218 12223 4.925054 GGTAACGTGCACTATTACAGTTGA 59.075 41.667 28.04 8.72 34.26 3.18
3219 12224 5.061808 GGTAACGTGCACTATTACAGTTGAG 59.938 44.000 28.04 9.61 34.26 3.02
3220 12225 2.993899 ACGTGCACTATTACAGTTGAGC 59.006 45.455 16.19 0.00 34.26 4.26
3221 12226 2.993220 CGTGCACTATTACAGTTGAGCA 59.007 45.455 16.19 0.00 34.26 4.26
3222 12227 3.181530 CGTGCACTATTACAGTTGAGCAC 60.182 47.826 16.19 0.00 44.94 4.40
3223 12228 3.997021 GTGCACTATTACAGTTGAGCACT 59.003 43.478 10.32 0.00 44.95 4.40
3224 12229 4.092091 GTGCACTATTACAGTTGAGCACTC 59.908 45.833 10.32 0.00 44.95 3.51
3225 12230 3.304559 GCACTATTACAGTTGAGCACTCG 59.695 47.826 0.00 0.00 34.26 4.18
3226 12231 4.733850 CACTATTACAGTTGAGCACTCGA 58.266 43.478 0.00 0.00 34.26 4.04
3227 12232 5.344066 CACTATTACAGTTGAGCACTCGAT 58.656 41.667 0.00 0.00 34.26 3.59
3228 12233 5.230936 CACTATTACAGTTGAGCACTCGATG 59.769 44.000 0.00 0.00 34.26 3.84
3229 12234 3.934457 TTACAGTTGAGCACTCGATGA 57.066 42.857 0.00 0.00 30.92 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 3646 3.389983 CCTTAAAGTATGGATCCCACCGA 59.610 47.826 9.90 0.00 35.80 4.69
124 3705 6.461110 AGGATCTAAACAAATTCATGCCTG 57.539 37.500 0.00 0.00 0.00 4.85
263 3845 2.677836 TCACGTTCTAAAGCATCATGCC 59.322 45.455 5.84 0.00 46.52 4.40
266 3848 5.295292 CCATTCTCACGTTCTAAAGCATCAT 59.705 40.000 0.00 0.00 0.00 2.45
357 4099 4.039973 ACGAGGAACATTCAGGTTACTTGA 59.960 41.667 10.25 0.00 43.22 3.02
540 4282 2.710377 TGAGCCAAATGCACGTTCTAT 58.290 42.857 0.00 0.00 44.83 1.98
701 4443 5.765510 TGAGTAATATTTGGCACCCATTCT 58.234 37.500 0.00 0.00 31.53 2.40
803 4545 3.243401 GCAAATGGTTTTGTCGGTCTTCT 60.243 43.478 0.97 0.00 43.43 2.85
1054 4937 5.012664 TGCCACTAGAGACCAAATCACTTAA 59.987 40.000 0.00 0.00 30.07 1.85
1099 4982 4.520111 ACAATTGTTGAGCTGTGATTGCTA 59.480 37.500 4.92 0.00 41.30 3.49
1289 5172 9.855021 AAATAGTTACCTTAACATGATTTGTGC 57.145 29.630 0.00 0.00 41.07 4.57
1347 5238 6.417930 GGCAAGTATTTGACTTCACAAAACTC 59.582 38.462 1.56 0.00 45.81 3.01
1349 5240 6.510746 GGCAAGTATTTGACTTCACAAAAC 57.489 37.500 1.56 0.00 45.81 2.43
1360 5251 5.476945 GGAAGAAAAGGAGGCAAGTATTTGA 59.523 40.000 1.56 0.00 36.36 2.69
1361 5252 5.478332 AGGAAGAAAAGGAGGCAAGTATTTG 59.522 40.000 0.00 0.00 37.36 2.32
1364 5255 4.936685 AGGAAGAAAAGGAGGCAAGTAT 57.063 40.909 0.00 0.00 0.00 2.12
1389 5280 8.796475 AGAAGAATTTCAGCAAGTATTTAAGCA 58.204 29.630 0.00 0.00 35.70 3.91
1390 5281 9.631452 AAGAAGAATTTCAGCAAGTATTTAAGC 57.369 29.630 0.00 0.00 35.70 3.09
1411 5302 9.049523 TCAGCAAGTATTTGAGCATATAAGAAG 57.950 33.333 1.56 0.00 36.36 2.85
1412 5303 8.962884 TCAGCAAGTATTTGAGCATATAAGAA 57.037 30.769 1.56 0.00 36.36 2.52
1419 5310 9.880157 AAATAATTTCAGCAAGTATTTGAGCAT 57.120 25.926 1.56 0.00 41.76 3.79
1443 5334 9.990360 TCAACAAGTATTCGAGGCATATATAAA 57.010 29.630 0.00 0.00 0.00 1.40
1446 5337 8.902540 TTTCAACAAGTATTCGAGGCATATAT 57.097 30.769 0.00 0.00 0.00 0.86
1447 5338 8.902540 ATTTCAACAAGTATTCGAGGCATATA 57.097 30.769 0.00 0.00 0.00 0.86
1448 5339 7.807977 ATTTCAACAAGTATTCGAGGCATAT 57.192 32.000 0.00 0.00 0.00 1.78
1450 5341 6.375455 AGAATTTCAACAAGTATTCGAGGCAT 59.625 34.615 0.00 0.00 33.38 4.40
1451 5342 5.705441 AGAATTTCAACAAGTATTCGAGGCA 59.295 36.000 0.00 0.00 33.38 4.75
1452 5343 6.183309 AGAATTTCAACAAGTATTCGAGGC 57.817 37.500 0.00 0.00 33.38 4.70
1453 5344 7.119846 AGGAAGAATTTCAACAAGTATTCGAGG 59.880 37.037 0.00 0.00 34.90 4.63
1455 5346 7.979444 AGGAAGAATTTCAACAAGTATTCGA 57.021 32.000 0.00 0.00 34.90 3.71
1511 5496 8.910944 AGAATTTCAGCAAGTATTTGAGCATAT 58.089 29.630 1.56 0.00 36.36 1.78
1516 5501 7.824672 AGGAAGAATTTCAGCAAGTATTTGAG 58.175 34.615 1.56 0.00 34.20 3.02
1517 5502 7.765695 AGGAAGAATTTCAGCAAGTATTTGA 57.234 32.000 1.56 0.00 34.20 2.69
1527 5512 7.502120 TTGAGCATATAGGAAGAATTTCAGC 57.498 36.000 0.00 0.00 34.90 4.26
1536 5521 7.658982 TCAGCAAGTATTTGAGCATATAGGAAG 59.341 37.037 1.56 0.00 36.36 3.46
1537 5522 7.508687 TCAGCAAGTATTTGAGCATATAGGAA 58.491 34.615 1.56 0.00 36.36 3.36
1539 5524 7.734924 TTCAGCAAGTATTTGAGCATATAGG 57.265 36.000 1.56 0.00 36.36 2.57
1544 5529 6.694447 ACAATTTCAGCAAGTATTTGAGCAT 58.306 32.000 1.56 0.00 36.36 3.79
1545 5530 6.088016 ACAATTTCAGCAAGTATTTGAGCA 57.912 33.333 1.56 0.00 36.36 4.26
1546 5531 7.383300 AGAAACAATTTCAGCAAGTATTTGAGC 59.617 33.333 1.56 0.00 42.10 4.26
1547 5532 8.807667 AGAAACAATTTCAGCAAGTATTTGAG 57.192 30.769 1.56 0.00 42.10 3.02
1552 5537 9.956720 GCATATAGAAACAATTTCAGCAAGTAT 57.043 29.630 4.25 0.00 42.10 2.12
1641 10632 9.710900 AAAGGAAGAATTTTAGCAAGTATTTGG 57.289 29.630 0.00 0.00 34.79 3.28
1877 10868 0.482446 AACCTCTTCATGTGGGGCAA 59.518 50.000 7.18 0.00 33.83 4.52
1968 10960 2.459644 AGTATGGTGGCGTGTAACCTA 58.540 47.619 0.00 0.00 37.36 3.08
1974 10966 0.322456 ATGCAAGTATGGTGGCGTGT 60.322 50.000 0.00 0.00 0.00 4.49
2148 11140 2.607499 TCCAACACCTTGAATGCCATT 58.393 42.857 0.00 0.00 0.00 3.16
2176 11168 5.962031 ACCTAGAAACCCAAACCTTCTTTTT 59.038 36.000 0.00 0.00 31.91 1.94
2232 11224 2.093181 TCACTACATATGCACCCACCAC 60.093 50.000 1.58 0.00 0.00 4.16
2323 11315 4.119862 CCATAGTTATGGTCTCGGTTGTG 58.880 47.826 9.56 0.00 46.42 3.33
2400 11393 4.164030 TCCATACATAAGTCAGGTGCACAT 59.836 41.667 20.43 9.24 0.00 3.21
2546 11548 7.283127 TGAGATTACCCTCATAATTTGCACTTC 59.717 37.037 0.00 0.00 38.18 3.01
2590 11592 5.789574 TGAAGGATAAGGGTTGTGGTATT 57.210 39.130 0.00 0.00 0.00 1.89
2626 11629 3.776969 AGGATAGCCATCAGAGTGTTTGA 59.223 43.478 0.00 0.00 36.29 2.69
2695 11698 1.314730 TTCTGTTTGGTTCGAAGGGC 58.685 50.000 0.00 0.00 0.00 5.19
2798 11803 1.304713 AAGCAAGATGGTGGCCAGG 60.305 57.895 5.11 0.00 36.75 4.45
2802 11807 1.340889 TGTTTGAAGCAAGATGGTGGC 59.659 47.619 0.00 0.00 0.00 5.01
2803 11808 3.947910 ATGTTTGAAGCAAGATGGTGG 57.052 42.857 0.00 0.00 0.00 4.61
2804 11809 3.430895 GCAATGTTTGAAGCAAGATGGTG 59.569 43.478 0.00 0.00 0.00 4.17
2805 11810 3.322828 AGCAATGTTTGAAGCAAGATGGT 59.677 39.130 0.00 0.00 0.00 3.55
2806 11811 3.921677 AGCAATGTTTGAAGCAAGATGG 58.078 40.909 0.00 0.00 0.00 3.51
2807 11812 5.100259 CCTAGCAATGTTTGAAGCAAGATG 58.900 41.667 0.00 0.00 0.00 2.90
2808 11813 5.012239 TCCTAGCAATGTTTGAAGCAAGAT 58.988 37.500 0.00 0.00 0.00 2.40
2809 11814 4.397420 TCCTAGCAATGTTTGAAGCAAGA 58.603 39.130 0.00 0.00 0.00 3.02
2810 11815 4.771590 TCCTAGCAATGTTTGAAGCAAG 57.228 40.909 0.00 0.00 0.00 4.01
2811 11816 5.945784 AGTATCCTAGCAATGTTTGAAGCAA 59.054 36.000 0.00 0.00 0.00 3.91
2812 11817 5.500234 AGTATCCTAGCAATGTTTGAAGCA 58.500 37.500 0.00 0.00 0.00 3.91
2813 11818 5.819901 AGAGTATCCTAGCAATGTTTGAAGC 59.180 40.000 0.00 0.00 33.66 3.86
2814 11819 7.201679 CCAAGAGTATCCTAGCAATGTTTGAAG 60.202 40.741 0.00 0.00 33.66 3.02
2815 11820 6.599244 CCAAGAGTATCCTAGCAATGTTTGAA 59.401 38.462 0.00 0.00 33.66 2.69
2816 11821 6.115446 CCAAGAGTATCCTAGCAATGTTTGA 58.885 40.000 0.00 0.00 33.66 2.69
2817 11822 5.882557 ACCAAGAGTATCCTAGCAATGTTTG 59.117 40.000 0.00 0.00 33.66 2.93
2818 11823 5.882557 CACCAAGAGTATCCTAGCAATGTTT 59.117 40.000 0.00 0.00 33.66 2.83
2819 11824 5.045578 ACACCAAGAGTATCCTAGCAATGTT 60.046 40.000 0.00 0.00 33.66 2.71
2820 11825 4.471386 ACACCAAGAGTATCCTAGCAATGT 59.529 41.667 0.00 0.00 33.66 2.71
2821 11826 5.028549 ACACCAAGAGTATCCTAGCAATG 57.971 43.478 0.00 0.00 33.66 2.82
2822 11827 4.965532 AGACACCAAGAGTATCCTAGCAAT 59.034 41.667 0.00 0.00 33.66 3.56
2823 11828 4.160439 CAGACACCAAGAGTATCCTAGCAA 59.840 45.833 0.00 0.00 33.66 3.91
2824 11829 3.701542 CAGACACCAAGAGTATCCTAGCA 59.298 47.826 0.00 0.00 33.66 3.49
2825 11830 3.702045 ACAGACACCAAGAGTATCCTAGC 59.298 47.826 0.00 0.00 33.66 3.42
2826 11831 4.950475 TCACAGACACCAAGAGTATCCTAG 59.050 45.833 0.00 0.00 33.66 3.02
2827 11832 4.705507 GTCACAGACACCAAGAGTATCCTA 59.294 45.833 0.00 0.00 30.69 2.94
2828 11833 3.511934 GTCACAGACACCAAGAGTATCCT 59.488 47.826 0.00 0.00 30.69 3.24
2829 11834 3.258372 TGTCACAGACACCAAGAGTATCC 59.742 47.826 0.00 0.00 37.67 2.59
2830 11835 4.021894 ACTGTCACAGACACCAAGAGTATC 60.022 45.833 13.14 0.00 37.67 2.24
2831 11836 3.898123 ACTGTCACAGACACCAAGAGTAT 59.102 43.478 13.14 0.00 37.67 2.12
2832 11837 3.296854 ACTGTCACAGACACCAAGAGTA 58.703 45.455 13.14 0.00 37.67 2.59
2833 11838 2.111384 ACTGTCACAGACACCAAGAGT 58.889 47.619 13.14 0.00 37.67 3.24
2834 11839 2.868583 CAACTGTCACAGACACCAAGAG 59.131 50.000 13.14 0.00 37.67 2.85
2835 11840 2.499693 TCAACTGTCACAGACACCAAGA 59.500 45.455 13.14 0.00 37.67 3.02
2836 11841 2.905075 TCAACTGTCACAGACACCAAG 58.095 47.619 13.14 0.00 37.67 3.61
2837 11842 3.558931 ATCAACTGTCACAGACACCAA 57.441 42.857 13.14 0.00 37.67 3.67
2838 11843 3.134623 AGAATCAACTGTCACAGACACCA 59.865 43.478 13.14 0.00 37.67 4.17
2839 11844 3.733337 AGAATCAACTGTCACAGACACC 58.267 45.455 13.14 0.00 37.67 4.16
2840 11845 4.626042 AGAGAATCAACTGTCACAGACAC 58.374 43.478 13.14 0.00 35.88 3.67
2841 11846 4.342092 TGAGAGAATCAACTGTCACAGACA 59.658 41.667 13.14 1.05 37.72 3.41
2842 11847 4.876125 TGAGAGAATCAACTGTCACAGAC 58.124 43.478 13.14 0.00 35.73 3.51
2843 11848 5.069648 ACTTGAGAGAATCAACTGTCACAGA 59.930 40.000 13.14 0.00 43.09 3.41
2844 11849 5.295950 ACTTGAGAGAATCAACTGTCACAG 58.704 41.667 2.22 2.22 43.09 3.66
2845 11850 5.282055 ACTTGAGAGAATCAACTGTCACA 57.718 39.130 0.00 0.00 43.09 3.58
2846 11851 6.364706 CAGTACTTGAGAGAATCAACTGTCAC 59.635 42.308 0.00 0.00 43.09 3.67
2847 11852 6.265422 TCAGTACTTGAGAGAATCAACTGTCA 59.735 38.462 0.00 0.00 43.09 3.58
2848 11853 6.682746 TCAGTACTTGAGAGAATCAACTGTC 58.317 40.000 0.00 0.00 43.09 3.51
2849 11854 6.656632 TCAGTACTTGAGAGAATCAACTGT 57.343 37.500 0.00 0.06 43.09 3.55
2862 11867 2.037251 GGTGCTTGGACTCAGTACTTGA 59.963 50.000 0.00 0.00 0.00 3.02
2863 11868 2.417719 GGTGCTTGGACTCAGTACTTG 58.582 52.381 0.00 0.00 0.00 3.16
2864 11869 1.000955 CGGTGCTTGGACTCAGTACTT 59.999 52.381 0.00 0.00 0.00 2.24
2865 11870 0.603569 CGGTGCTTGGACTCAGTACT 59.396 55.000 0.00 0.00 0.00 2.73
2866 11871 0.601558 TCGGTGCTTGGACTCAGTAC 59.398 55.000 0.00 0.00 0.00 2.73
2867 11872 0.888619 CTCGGTGCTTGGACTCAGTA 59.111 55.000 0.00 0.00 0.00 2.74
2868 11873 0.827925 TCTCGGTGCTTGGACTCAGT 60.828 55.000 0.00 0.00 0.00 3.41
2869 11874 0.389166 GTCTCGGTGCTTGGACTCAG 60.389 60.000 0.00 0.00 0.00 3.35
2870 11875 1.666011 GTCTCGGTGCTTGGACTCA 59.334 57.895 0.00 0.00 0.00 3.41
2871 11876 1.079750 GGTCTCGGTGCTTGGACTC 60.080 63.158 0.00 0.00 0.00 3.36
2872 11877 1.837051 TGGTCTCGGTGCTTGGACT 60.837 57.895 0.00 0.00 0.00 3.85
2873 11878 1.668151 GTGGTCTCGGTGCTTGGAC 60.668 63.158 0.00 0.00 0.00 4.02
2874 11879 2.741092 GTGGTCTCGGTGCTTGGA 59.259 61.111 0.00 0.00 0.00 3.53
2875 11880 2.738521 CGTGGTCTCGGTGCTTGG 60.739 66.667 0.00 0.00 0.00 3.61
2876 11881 2.022129 GTCGTGGTCTCGGTGCTTG 61.022 63.158 0.00 0.00 0.00 4.01
2877 11882 2.338984 GTCGTGGTCTCGGTGCTT 59.661 61.111 0.00 0.00 0.00 3.91
2878 11883 2.910479 TGTCGTGGTCTCGGTGCT 60.910 61.111 0.00 0.00 0.00 4.40
2879 11884 1.859427 TACTGTCGTGGTCTCGGTGC 61.859 60.000 0.00 0.00 0.00 5.01
2880 11885 0.168348 CTACTGTCGTGGTCTCGGTG 59.832 60.000 0.00 0.00 0.00 4.94
2881 11886 1.584380 GCTACTGTCGTGGTCTCGGT 61.584 60.000 0.00 0.00 0.00 4.69
2882 11887 1.136984 GCTACTGTCGTGGTCTCGG 59.863 63.158 0.00 0.00 0.00 4.63
2883 11888 1.328069 CTAGCTACTGTCGTGGTCTCG 59.672 57.143 0.00 0.00 0.00 4.04
2884 11889 2.358015 ACTAGCTACTGTCGTGGTCTC 58.642 52.381 0.00 0.00 0.00 3.36
2885 11890 2.493414 ACTAGCTACTGTCGTGGTCT 57.507 50.000 0.00 0.00 0.00 3.85
2886 11891 2.031930 GCTACTAGCTACTGTCGTGGTC 59.968 54.545 0.35 0.00 38.45 4.02
2887 11892 2.015587 GCTACTAGCTACTGTCGTGGT 58.984 52.381 0.35 0.00 38.45 4.16
2888 11893 2.014857 TGCTACTAGCTACTGTCGTGG 58.985 52.381 9.49 0.00 42.97 4.94
2889 11894 3.759527 TTGCTACTAGCTACTGTCGTG 57.240 47.619 9.49 0.00 42.97 4.35
2890 11895 4.641094 AGATTTGCTACTAGCTACTGTCGT 59.359 41.667 9.49 0.00 42.97 4.34
2891 11896 5.176407 AGATTTGCTACTAGCTACTGTCG 57.824 43.478 9.49 0.00 42.97 4.35
2892 11897 6.919115 GGTAAGATTTGCTACTAGCTACTGTC 59.081 42.308 9.49 1.39 42.97 3.51
2893 11898 6.380274 TGGTAAGATTTGCTACTAGCTACTGT 59.620 38.462 9.49 0.00 42.97 3.55
2894 11899 6.806751 TGGTAAGATTTGCTACTAGCTACTG 58.193 40.000 9.49 0.00 42.97 2.74
2895 11900 7.604657 ATGGTAAGATTTGCTACTAGCTACT 57.395 36.000 9.49 0.00 42.97 2.57
2896 11901 7.307455 GCAATGGTAAGATTTGCTACTAGCTAC 60.307 40.741 9.49 2.69 42.97 3.58
2897 11902 6.706270 GCAATGGTAAGATTTGCTACTAGCTA 59.294 38.462 9.49 0.00 42.97 3.32
2898 11903 5.529060 GCAATGGTAAGATTTGCTACTAGCT 59.471 40.000 9.49 0.00 42.97 3.32
2899 11904 5.296780 TGCAATGGTAAGATTTGCTACTAGC 59.703 40.000 0.61 0.61 44.62 3.42
2900 11905 6.925610 TGCAATGGTAAGATTTGCTACTAG 57.074 37.500 8.17 0.00 44.62 2.57
2901 11906 9.219603 GATATGCAATGGTAAGATTTGCTACTA 57.780 33.333 8.17 0.00 44.62 1.82
2902 11907 7.941238 AGATATGCAATGGTAAGATTTGCTACT 59.059 33.333 8.17 1.04 44.62 2.57
2903 11908 8.103948 AGATATGCAATGGTAAGATTTGCTAC 57.896 34.615 8.17 0.00 44.62 3.58
2904 11909 7.391554 GGAGATATGCAATGGTAAGATTTGCTA 59.608 37.037 8.17 0.26 44.62 3.49
2905 11910 6.208204 GGAGATATGCAATGGTAAGATTTGCT 59.792 38.462 8.17 0.00 44.62 3.91
2906 11911 6.385033 GGAGATATGCAATGGTAAGATTTGC 58.615 40.000 0.00 0.00 44.59 3.68
2907 11912 6.605849 CGGAGATATGCAATGGTAAGATTTG 58.394 40.000 0.00 0.00 0.00 2.32
2908 11913 5.182001 GCGGAGATATGCAATGGTAAGATTT 59.818 40.000 0.00 0.00 0.00 2.17
2909 11914 4.697352 GCGGAGATATGCAATGGTAAGATT 59.303 41.667 0.00 0.00 0.00 2.40
2910 11915 4.256920 GCGGAGATATGCAATGGTAAGAT 58.743 43.478 0.00 0.00 0.00 2.40
2911 11916 3.070878 TGCGGAGATATGCAATGGTAAGA 59.929 43.478 0.00 0.00 38.34 2.10
2912 11917 3.187227 GTGCGGAGATATGCAATGGTAAG 59.813 47.826 0.00 0.00 43.75 2.34
2913 11918 3.138304 GTGCGGAGATATGCAATGGTAA 58.862 45.455 0.00 0.00 43.75 2.85
2914 11919 2.368548 AGTGCGGAGATATGCAATGGTA 59.631 45.455 0.00 0.00 43.75 3.25
2915 11920 1.141657 AGTGCGGAGATATGCAATGGT 59.858 47.619 0.00 0.00 43.75 3.55
2916 11921 1.888215 AGTGCGGAGATATGCAATGG 58.112 50.000 0.00 0.00 43.75 3.16
2917 11922 2.603892 GCAAGTGCGGAGATATGCAATG 60.604 50.000 0.00 0.00 43.75 2.82
2918 11923 1.605710 GCAAGTGCGGAGATATGCAAT 59.394 47.619 0.00 0.00 43.75 3.56
2919 11924 1.016627 GCAAGTGCGGAGATATGCAA 58.983 50.000 0.00 0.00 43.75 4.08
2920 11925 2.694065 GCAAGTGCGGAGATATGCA 58.306 52.632 0.00 0.00 39.13 3.96
2931 11936 1.929836 CGGATGTCTAAGAGCAAGTGC 59.070 52.381 0.00 0.00 42.49 4.40
2932 11937 3.238108 ACGGATGTCTAAGAGCAAGTG 57.762 47.619 0.00 0.00 0.00 3.16
2933 11938 3.381908 CCTACGGATGTCTAAGAGCAAGT 59.618 47.826 0.00 0.00 0.00 3.16
2934 11939 3.381908 ACCTACGGATGTCTAAGAGCAAG 59.618 47.826 0.00 0.00 0.00 4.01
2935 11940 3.362706 ACCTACGGATGTCTAAGAGCAA 58.637 45.455 0.00 0.00 0.00 3.91
2936 11941 3.014304 ACCTACGGATGTCTAAGAGCA 57.986 47.619 0.00 0.00 0.00 4.26
2937 11942 5.617308 CGAATACCTACGGATGTCTAAGAGC 60.617 48.000 0.00 0.00 0.00 4.09
2938 11943 5.469421 ACGAATACCTACGGATGTCTAAGAG 59.531 44.000 0.00 0.00 0.00 2.85
2939 11944 5.371526 ACGAATACCTACGGATGTCTAAGA 58.628 41.667 0.00 0.00 0.00 2.10
2940 11945 5.334724 GGACGAATACCTACGGATGTCTAAG 60.335 48.000 0.00 0.00 0.00 2.18
2941 11946 4.516698 GGACGAATACCTACGGATGTCTAA 59.483 45.833 0.00 0.00 0.00 2.10
2942 11947 4.067896 GGACGAATACCTACGGATGTCTA 58.932 47.826 0.00 0.00 0.00 2.59
2943 11948 2.883386 GGACGAATACCTACGGATGTCT 59.117 50.000 0.00 0.00 0.00 3.41
2944 11949 2.030451 GGGACGAATACCTACGGATGTC 60.030 54.545 0.00 0.00 0.00 3.06
2945 11950 1.959282 GGGACGAATACCTACGGATGT 59.041 52.381 0.00 0.00 0.00 3.06
2946 11951 1.958579 TGGGACGAATACCTACGGATG 59.041 52.381 0.00 0.00 0.00 3.51
2947 11952 2.369983 TGGGACGAATACCTACGGAT 57.630 50.000 0.00 0.00 0.00 4.18
2948 11953 2.369983 ATGGGACGAATACCTACGGA 57.630 50.000 0.00 0.00 0.00 4.69
2949 11954 4.589216 TTAATGGGACGAATACCTACGG 57.411 45.455 0.00 0.00 0.00 4.02
2950 11955 5.775686 TGATTAATGGGACGAATACCTACG 58.224 41.667 0.00 0.00 0.00 3.51
2951 11956 6.645415 CACTGATTAATGGGACGAATACCTAC 59.355 42.308 0.00 0.00 0.00 3.18
2952 11957 6.239487 CCACTGATTAATGGGACGAATACCTA 60.239 42.308 0.00 0.00 31.83 3.08
2953 11958 5.454755 CCACTGATTAATGGGACGAATACCT 60.455 44.000 0.00 0.00 31.83 3.08
2954 11959 4.755123 CCACTGATTAATGGGACGAATACC 59.245 45.833 0.00 0.00 31.83 2.73
2955 11960 5.365619 ACCACTGATTAATGGGACGAATAC 58.634 41.667 0.00 0.00 40.59 1.89
2956 11961 5.623956 ACCACTGATTAATGGGACGAATA 57.376 39.130 0.00 0.00 40.59 1.75
2957 11962 4.503714 ACCACTGATTAATGGGACGAAT 57.496 40.909 0.00 0.00 40.59 3.34
2958 11963 3.992943 ACCACTGATTAATGGGACGAA 57.007 42.857 0.00 0.00 40.59 3.85
2959 11964 3.008594 ACAACCACTGATTAATGGGACGA 59.991 43.478 0.00 0.00 40.59 4.20
2960 11965 3.126858 CACAACCACTGATTAATGGGACG 59.873 47.826 0.00 0.00 40.59 4.79
2961 11966 3.119495 GCACAACCACTGATTAATGGGAC 60.119 47.826 0.00 0.00 40.59 4.46
2962 11967 3.088532 GCACAACCACTGATTAATGGGA 58.911 45.455 0.00 0.00 40.59 4.37
2963 11968 2.166254 GGCACAACCACTGATTAATGGG 59.834 50.000 0.00 0.00 40.59 4.00
2964 11969 2.824936 TGGCACAACCACTGATTAATGG 59.175 45.455 0.00 0.00 46.36 3.16
2982 11987 3.272334 CGGAGGCTTGCGTATGGC 61.272 66.667 0.36 4.86 43.96 4.40
2988 11993 3.188786 GCACTACGGAGGCTTGCG 61.189 66.667 8.49 8.49 44.43 4.85
2989 11994 3.188786 CGCACTACGGAGGCTTGC 61.189 66.667 0.00 0.00 38.44 4.01
2998 12003 3.475774 GTGAACGGCCGCACTACG 61.476 66.667 28.58 0.00 43.15 3.51
2999 12004 1.623973 GAAGTGAACGGCCGCACTAC 61.624 60.000 30.47 21.89 44.06 2.73
3000 12005 1.373748 GAAGTGAACGGCCGCACTA 60.374 57.895 30.47 12.55 44.06 2.74
3001 12006 1.812686 TAGAAGTGAACGGCCGCACT 61.813 55.000 26.64 26.64 46.59 4.40
3002 12007 1.352156 CTAGAAGTGAACGGCCGCAC 61.352 60.000 28.58 25.51 35.30 5.34
3003 12008 1.080093 CTAGAAGTGAACGGCCGCA 60.080 57.895 28.58 14.12 0.00 5.69
3004 12009 0.171903 TACTAGAAGTGAACGGCCGC 59.828 55.000 28.58 11.02 0.00 6.53
3005 12010 2.094854 AGTTACTAGAAGTGAACGGCCG 60.095 50.000 26.86 26.86 0.00 6.13
3006 12011 3.589495 AGTTACTAGAAGTGAACGGCC 57.411 47.619 0.00 0.00 0.00 6.13
3007 12012 5.353678 TCTCTAGTTACTAGAAGTGAACGGC 59.646 44.000 20.78 0.00 41.74 5.68
3008 12013 6.981762 TCTCTAGTTACTAGAAGTGAACGG 57.018 41.667 20.78 8.64 41.74 4.44
3009 12014 7.242783 GGTTCTCTAGTTACTAGAAGTGAACG 58.757 42.308 27.49 15.94 41.46 3.95
3010 12015 7.176340 TGGGTTCTCTAGTTACTAGAAGTGAAC 59.824 40.741 27.16 27.16 41.74 3.18
3011 12016 7.236529 TGGGTTCTCTAGTTACTAGAAGTGAA 58.763 38.462 20.78 17.31 41.74 3.18
3012 12017 6.787170 TGGGTTCTCTAGTTACTAGAAGTGA 58.213 40.000 20.78 13.04 41.74 3.41
3013 12018 7.463961 TTGGGTTCTCTAGTTACTAGAAGTG 57.536 40.000 20.78 11.14 41.74 3.16
3014 12019 7.342541 GGATTGGGTTCTCTAGTTACTAGAAGT 59.657 40.741 20.78 4.29 41.74 3.01
3015 12020 7.562088 AGGATTGGGTTCTCTAGTTACTAGAAG 59.438 40.741 20.78 15.02 41.74 2.85
3016 12021 7.420029 AGGATTGGGTTCTCTAGTTACTAGAA 58.580 38.462 20.78 8.31 41.74 2.10
3017 12022 6.982899 AGGATTGGGTTCTCTAGTTACTAGA 58.017 40.000 19.51 19.51 40.31 2.43
3018 12023 7.201929 GGAAGGATTGGGTTCTCTAGTTACTAG 60.202 44.444 12.85 12.85 35.57 2.57
3019 12024 6.610425 GGAAGGATTGGGTTCTCTAGTTACTA 59.390 42.308 0.00 0.00 0.00 1.82
3020 12025 5.425862 GGAAGGATTGGGTTCTCTAGTTACT 59.574 44.000 0.00 0.00 0.00 2.24
3021 12026 5.396548 GGGAAGGATTGGGTTCTCTAGTTAC 60.397 48.000 0.00 0.00 0.00 2.50
3022 12027 4.720273 GGGAAGGATTGGGTTCTCTAGTTA 59.280 45.833 0.00 0.00 0.00 2.24
3023 12028 3.523972 GGGAAGGATTGGGTTCTCTAGTT 59.476 47.826 0.00 0.00 0.00 2.24
3024 12029 3.116174 GGGAAGGATTGGGTTCTCTAGT 58.884 50.000 0.00 0.00 0.00 2.57
3025 12030 3.115390 TGGGAAGGATTGGGTTCTCTAG 58.885 50.000 0.00 0.00 0.00 2.43
3026 12031 3.214694 TGGGAAGGATTGGGTTCTCTA 57.785 47.619 0.00 0.00 0.00 2.43
3027 12032 2.059756 TGGGAAGGATTGGGTTCTCT 57.940 50.000 0.00 0.00 0.00 3.10
3028 12033 2.659428 CATGGGAAGGATTGGGTTCTC 58.341 52.381 0.00 0.00 0.00 2.87
3029 12034 1.288932 CCATGGGAAGGATTGGGTTCT 59.711 52.381 2.85 0.00 0.00 3.01
3030 12035 1.780503 CCATGGGAAGGATTGGGTTC 58.219 55.000 2.85 0.00 0.00 3.62
3031 12036 0.325577 GCCATGGGAAGGATTGGGTT 60.326 55.000 15.13 0.00 0.00 4.11
3032 12037 1.311059 GCCATGGGAAGGATTGGGT 59.689 57.895 15.13 0.00 0.00 4.51
3033 12038 0.105349 ATGCCATGGGAAGGATTGGG 60.105 55.000 11.10 0.00 0.00 4.12
3034 12039 1.335145 GATGCCATGGGAAGGATTGG 58.665 55.000 11.10 0.00 0.00 3.16
3035 12040 1.133262 AGGATGCCATGGGAAGGATTG 60.133 52.381 11.10 0.00 0.00 2.67
3036 12041 1.238615 AGGATGCCATGGGAAGGATT 58.761 50.000 11.10 0.00 0.00 3.01
3037 12042 1.146566 GAAGGATGCCATGGGAAGGAT 59.853 52.381 11.10 0.00 0.00 3.24
3038 12043 0.552848 GAAGGATGCCATGGGAAGGA 59.447 55.000 11.10 0.00 0.00 3.36
3039 12044 0.554792 AGAAGGATGCCATGGGAAGG 59.445 55.000 11.10 0.00 0.00 3.46
3040 12045 2.305009 GAAGAAGGATGCCATGGGAAG 58.695 52.381 11.10 0.00 0.00 3.46
3041 12046 1.640149 TGAAGAAGGATGCCATGGGAA 59.360 47.619 11.10 0.00 0.00 3.97
3042 12047 1.297968 TGAAGAAGGATGCCATGGGA 58.702 50.000 15.13 12.25 0.00 4.37
3043 12048 2.029623 CTTGAAGAAGGATGCCATGGG 58.970 52.381 15.13 0.00 0.00 4.00
3044 12049 3.008835 TCTTGAAGAAGGATGCCATGG 57.991 47.619 7.63 7.63 0.00 3.66
3045 12050 4.204799 TCATCTTGAAGAAGGATGCCATG 58.795 43.478 0.00 0.00 0.00 3.66
3046 12051 4.515028 TCATCTTGAAGAAGGATGCCAT 57.485 40.909 0.00 0.00 0.00 4.40
3047 12052 4.305539 TTCATCTTGAAGAAGGATGCCA 57.694 40.909 0.00 0.00 31.83 4.92
3065 12070 4.709886 TCCGATCCTTTGATGACTACTTCA 59.290 41.667 0.00 0.00 39.11 3.02
3066 12071 5.044558 GTCCGATCCTTTGATGACTACTTC 58.955 45.833 0.00 0.00 0.00 3.01
3067 12072 4.440250 CGTCCGATCCTTTGATGACTACTT 60.440 45.833 0.00 0.00 0.00 2.24
3068 12073 3.066900 CGTCCGATCCTTTGATGACTACT 59.933 47.826 0.00 0.00 0.00 2.57
3069 12074 3.372954 CGTCCGATCCTTTGATGACTAC 58.627 50.000 0.00 0.00 0.00 2.73
3070 12075 2.223735 GCGTCCGATCCTTTGATGACTA 60.224 50.000 0.00 0.00 0.00 2.59
3071 12076 1.471676 GCGTCCGATCCTTTGATGACT 60.472 52.381 0.00 0.00 0.00 3.41
3072 12077 0.931005 GCGTCCGATCCTTTGATGAC 59.069 55.000 0.00 0.00 0.00 3.06
3073 12078 0.179084 GGCGTCCGATCCTTTGATGA 60.179 55.000 0.00 0.00 0.00 2.92
3074 12079 0.461870 TGGCGTCCGATCCTTTGATG 60.462 55.000 0.00 0.00 0.00 3.07
3075 12080 0.462047 GTGGCGTCCGATCCTTTGAT 60.462 55.000 0.00 0.00 0.00 2.57
3076 12081 1.079405 GTGGCGTCCGATCCTTTGA 60.079 57.895 0.00 0.00 0.00 2.69
3077 12082 2.452813 CGTGGCGTCCGATCCTTTG 61.453 63.158 0.00 0.00 0.00 2.77
3078 12083 2.125673 CGTGGCGTCCGATCCTTT 60.126 61.111 0.00 0.00 0.00 3.11
3079 12084 4.143333 CCGTGGCGTCCGATCCTT 62.143 66.667 0.00 0.00 0.00 3.36
3081 12086 3.480225 CTACCGTGGCGTCCGATCC 62.480 68.421 0.00 0.00 0.00 3.36
3082 12087 2.025727 CTACCGTGGCGTCCGATC 59.974 66.667 0.00 0.00 0.00 3.69
3083 12088 2.438975 TCTACCGTGGCGTCCGAT 60.439 61.111 0.00 0.00 0.00 4.18
3084 12089 3.129502 CTCTACCGTGGCGTCCGA 61.130 66.667 0.00 0.00 0.00 4.55
3085 12090 3.129502 TCTCTACCGTGGCGTCCG 61.130 66.667 0.00 0.00 0.00 4.79
3086 12091 2.488820 GTCTCTACCGTGGCGTCC 59.511 66.667 0.00 0.00 0.00 4.79
3087 12092 2.099831 CGTCTCTACCGTGGCGTC 59.900 66.667 0.00 0.00 0.00 5.19
3088 12093 2.359107 TCGTCTCTACCGTGGCGT 60.359 61.111 0.00 0.00 33.83 5.68
3089 12094 2.099831 GTCGTCTCTACCGTGGCG 59.900 66.667 0.00 0.00 33.45 5.69
3090 12095 2.488820 GGTCGTCTCTACCGTGGC 59.511 66.667 0.00 0.00 0.00 5.01
3095 12100 1.446907 TGTCTTCGGTCGTCTCTACC 58.553 55.000 0.00 0.00 0.00 3.18
3096 12101 3.761311 AATGTCTTCGGTCGTCTCTAC 57.239 47.619 0.00 0.00 0.00 2.59
3097 12102 4.778534 AAAATGTCTTCGGTCGTCTCTA 57.221 40.909 0.00 0.00 0.00 2.43
3098 12103 3.662247 AAAATGTCTTCGGTCGTCTCT 57.338 42.857 0.00 0.00 0.00 3.10
3116 12121 2.478831 GCCGCTTTTGGATGTGAAAAA 58.521 42.857 0.00 0.00 0.00 1.94
3117 12122 1.601663 CGCCGCTTTTGGATGTGAAAA 60.602 47.619 0.00 0.00 0.00 2.29
3118 12123 0.039617 CGCCGCTTTTGGATGTGAAA 60.040 50.000 0.00 0.00 0.00 2.69
3119 12124 1.578926 CGCCGCTTTTGGATGTGAA 59.421 52.632 0.00 0.00 0.00 3.18
3120 12125 2.331893 CCGCCGCTTTTGGATGTGA 61.332 57.895 0.00 0.00 0.00 3.58
3121 12126 2.179018 CCGCCGCTTTTGGATGTG 59.821 61.111 0.00 0.00 0.00 3.21
3122 12127 2.282180 ACCGCCGCTTTTGGATGT 60.282 55.556 0.00 0.00 0.00 3.06
3123 12128 1.861542 TTCACCGCCGCTTTTGGATG 61.862 55.000 0.00 0.00 0.00 3.51
3124 12129 0.965363 ATTCACCGCCGCTTTTGGAT 60.965 50.000 0.00 0.00 0.00 3.41
3125 12130 1.175983 AATTCACCGCCGCTTTTGGA 61.176 50.000 0.00 0.00 0.00 3.53
3126 12131 0.319469 AAATTCACCGCCGCTTTTGG 60.319 50.000 0.00 0.00 0.00 3.28
3127 12132 1.496934 AAAATTCACCGCCGCTTTTG 58.503 45.000 0.00 0.00 0.00 2.44
3128 12133 2.232756 AAAAATTCACCGCCGCTTTT 57.767 40.000 0.00 0.00 0.00 2.27
3129 12134 3.978460 AAAAATTCACCGCCGCTTT 57.022 42.105 0.00 0.00 0.00 3.51
3146 12151 3.118445 GCCCATGCCCTATTTGCTAAAAA 60.118 43.478 0.00 0.00 0.00 1.94
3147 12152 2.433970 GCCCATGCCCTATTTGCTAAAA 59.566 45.455 0.00 0.00 0.00 1.52
3148 12153 2.038659 GCCCATGCCCTATTTGCTAAA 58.961 47.619 0.00 0.00 0.00 1.85
3149 12154 1.063341 TGCCCATGCCCTATTTGCTAA 60.063 47.619 0.00 0.00 36.33 3.09
3150 12155 0.555280 TGCCCATGCCCTATTTGCTA 59.445 50.000 0.00 0.00 36.33 3.49
3151 12156 0.325484 TTGCCCATGCCCTATTTGCT 60.325 50.000 0.00 0.00 36.33 3.91
3152 12157 0.540923 TTTGCCCATGCCCTATTTGC 59.459 50.000 0.00 0.00 36.33 3.68
3153 12158 1.832998 ACTTTGCCCATGCCCTATTTG 59.167 47.619 0.00 0.00 36.33 2.32
3154 12159 2.252535 ACTTTGCCCATGCCCTATTT 57.747 45.000 0.00 0.00 36.33 1.40
3155 12160 2.244769 ACTACTTTGCCCATGCCCTATT 59.755 45.455 0.00 0.00 36.33 1.73
3156 12161 1.852965 ACTACTTTGCCCATGCCCTAT 59.147 47.619 0.00 0.00 36.33 2.57
3157 12162 1.211949 GACTACTTTGCCCATGCCCTA 59.788 52.381 0.00 0.00 36.33 3.53
3158 12163 0.034089 GACTACTTTGCCCATGCCCT 60.034 55.000 0.00 0.00 36.33 5.19
3159 12164 1.376609 CGACTACTTTGCCCATGCCC 61.377 60.000 0.00 0.00 36.33 5.36
3160 12165 0.676782 ACGACTACTTTGCCCATGCC 60.677 55.000 0.00 0.00 36.33 4.40
3161 12166 0.727398 GACGACTACTTTGCCCATGC 59.273 55.000 0.00 0.00 38.26 4.06
3162 12167 1.338674 TGGACGACTACTTTGCCCATG 60.339 52.381 0.00 0.00 0.00 3.66
3163 12168 0.981183 TGGACGACTACTTTGCCCAT 59.019 50.000 0.00 0.00 0.00 4.00
3164 12169 0.981183 ATGGACGACTACTTTGCCCA 59.019 50.000 0.00 0.00 0.00 5.36
3165 12170 1.066430 TGATGGACGACTACTTTGCCC 60.066 52.381 0.00 0.00 0.00 5.36
3166 12171 2.380084 TGATGGACGACTACTTTGCC 57.620 50.000 0.00 0.00 0.00 4.52
3167 12172 2.092211 CGTTGATGGACGACTACTTTGC 59.908 50.000 0.00 0.00 45.47 3.68
3168 12173 3.314553 ACGTTGATGGACGACTACTTTG 58.685 45.455 4.29 0.00 45.47 2.77
3169 12174 3.655276 ACGTTGATGGACGACTACTTT 57.345 42.857 4.29 0.00 45.47 2.66
3170 12175 4.771590 TTACGTTGATGGACGACTACTT 57.228 40.909 0.00 0.00 45.47 2.24
3171 12176 4.771590 TTTACGTTGATGGACGACTACT 57.228 40.909 0.00 0.00 45.47 2.57
3172 12177 5.220340 CCATTTTACGTTGATGGACGACTAC 60.220 44.000 15.51 0.00 45.47 2.73
3173 12178 4.865925 CCATTTTACGTTGATGGACGACTA 59.134 41.667 15.51 0.00 45.47 2.59
3174 12179 3.682858 CCATTTTACGTTGATGGACGACT 59.317 43.478 15.51 0.00 45.47 4.18
3175 12180 3.434299 ACCATTTTACGTTGATGGACGAC 59.566 43.478 23.21 0.00 45.47 4.34
3176 12181 3.666274 ACCATTTTACGTTGATGGACGA 58.334 40.909 23.21 0.00 45.47 4.20
3177 12182 8.245663 ACGTTACCATTTTACGTTGATGGACG 62.246 42.308 23.21 22.81 45.21 4.79
3178 12183 5.106987 ACGTTACCATTTTACGTTGATGGAC 60.107 40.000 23.21 14.43 45.21 4.02
3179 12184 4.996122 ACGTTACCATTTTACGTTGATGGA 59.004 37.500 23.21 10.15 45.21 3.41
3180 12185 5.083389 CACGTTACCATTTTACGTTGATGG 58.917 41.667 17.76 17.76 45.21 3.51
3181 12186 4.551892 GCACGTTACCATTTTACGTTGATG 59.448 41.667 0.00 0.00 45.21 3.07
3182 12187 4.213694 TGCACGTTACCATTTTACGTTGAT 59.786 37.500 0.00 0.00 45.21 2.57
3183 12188 3.558829 TGCACGTTACCATTTTACGTTGA 59.441 39.130 0.00 0.00 45.21 3.18
3184 12189 3.660356 GTGCACGTTACCATTTTACGTTG 59.340 43.478 0.00 0.00 45.21 4.10
3185 12190 3.560896 AGTGCACGTTACCATTTTACGTT 59.439 39.130 12.01 0.00 45.21 3.99
3187 12192 3.799137 AGTGCACGTTACCATTTTACG 57.201 42.857 12.01 0.00 40.85 3.18
3188 12193 7.741198 TGTAATAGTGCACGTTACCATTTTAC 58.259 34.615 29.03 18.50 0.00 2.01
3189 12194 7.603404 ACTGTAATAGTGCACGTTACCATTTTA 59.397 33.333 29.03 17.18 38.49 1.52
3190 12195 6.428771 ACTGTAATAGTGCACGTTACCATTTT 59.571 34.615 29.03 15.43 38.49 1.82
3191 12196 5.935789 ACTGTAATAGTGCACGTTACCATTT 59.064 36.000 29.03 16.57 38.49 2.32
3192 12197 5.484715 ACTGTAATAGTGCACGTTACCATT 58.515 37.500 29.03 18.14 38.49 3.16
3193 12198 5.080969 ACTGTAATAGTGCACGTTACCAT 57.919 39.130 29.03 20.49 38.49 3.55
3194 12199 4.524316 ACTGTAATAGTGCACGTTACCA 57.476 40.909 29.03 20.96 38.49 3.25
3195 12200 4.925054 TCAACTGTAATAGTGCACGTTACC 59.075 41.667 29.03 18.82 40.26 2.85
3196 12201 5.444218 GCTCAACTGTAATAGTGCACGTTAC 60.444 44.000 27.20 27.20 40.26 2.50
3197 12202 4.624024 GCTCAACTGTAATAGTGCACGTTA 59.376 41.667 12.01 11.99 40.26 3.18
3198 12203 3.432252 GCTCAACTGTAATAGTGCACGTT 59.568 43.478 12.01 13.02 40.26 3.99
3199 12204 2.993899 GCTCAACTGTAATAGTGCACGT 59.006 45.455 12.01 0.96 40.26 4.49
3200 12205 2.993220 TGCTCAACTGTAATAGTGCACG 59.007 45.455 12.01 0.00 40.26 5.34
3201 12206 4.327854 GTGCTCAACTGTAATAGTGCAC 57.672 45.455 9.40 9.40 44.38 4.57
3202 12207 4.245660 GAGTGCTCAACTGTAATAGTGCA 58.754 43.478 0.00 0.00 40.07 4.57
3203 12208 3.304559 CGAGTGCTCAACTGTAATAGTGC 59.695 47.826 0.00 0.00 40.07 4.40
3204 12209 4.733850 TCGAGTGCTCAACTGTAATAGTG 58.266 43.478 0.00 0.00 40.07 2.74
3205 12210 5.125578 TCATCGAGTGCTCAACTGTAATAGT 59.874 40.000 0.00 0.00 40.07 2.12
3206 12211 5.582550 TCATCGAGTGCTCAACTGTAATAG 58.417 41.667 0.00 0.00 40.07 1.73
3207 12212 5.576447 TCATCGAGTGCTCAACTGTAATA 57.424 39.130 0.00 0.00 40.07 0.98
3208 12213 4.456280 TCATCGAGTGCTCAACTGTAAT 57.544 40.909 0.00 0.00 40.07 1.89
3209 12214 3.934457 TCATCGAGTGCTCAACTGTAA 57.066 42.857 0.00 0.00 40.07 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.