Multiple sequence alignment - TraesCS3B01G417800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G417800 chr3B 100.000 5599 0 0 1 5599 654647169 654652767 0.000000e+00 10340.0
1 TraesCS3B01G417800 chr3B 85.888 411 45 7 5085 5483 654652152 654652561 5.180000e-115 425.0
2 TraesCS3B01G417800 chr3B 85.888 411 45 7 4984 5393 654652253 654652651 5.180000e-115 425.0
3 TraesCS3B01G417800 chr3D 92.043 2212 95 38 1 2182 495915291 495917451 0.000000e+00 3035.0
4 TraesCS3B01G417800 chr3D 91.502 1012 65 13 2823 3823 495917996 495918997 0.000000e+00 1373.0
5 TraesCS3B01G417800 chr3D 97.897 523 10 1 4333 4854 495919410 495919932 0.000000e+00 904.0
6 TraesCS3B01G417800 chr3D 93.041 388 20 4 3946 4331 495918995 495919377 1.360000e-155 560.0
7 TraesCS3B01G417800 chr3D 93.803 355 19 2 4918 5271 495919933 495920285 1.070000e-146 531.0
8 TraesCS3B01G417800 chr3D 87.170 265 20 9 2292 2543 495917650 495917913 7.100000e-74 289.0
9 TraesCS3B01G417800 chr3D 79.360 344 39 16 5121 5442 495919944 495920277 4.390000e-51 213.0
10 TraesCS3B01G417800 chr3D 88.060 67 6 1 5535 5599 417423996 417424062 1.670000e-10 78.7
11 TraesCS3B01G417800 chr3A 92.036 2210 90 37 13 2189 635147512 635149668 0.000000e+00 3027.0
12 TraesCS3B01G417800 chr3A 92.427 1096 48 13 4332 5393 635151700 635152794 0.000000e+00 1531.0
13 TraesCS3B01G417800 chr3A 95.535 739 28 2 3087 3823 635150396 635151131 0.000000e+00 1177.0
14 TraesCS3B01G417800 chr3A 93.939 363 19 1 2185 2544 635149703 635150065 3.810000e-151 545.0
15 TraesCS3B01G417800 chr3A 93.836 292 14 3 2771 3061 635150110 635150398 2.400000e-118 436.0
16 TraesCS3B01G417800 chr3A 83.871 465 49 14 5085 5524 635152371 635152834 2.410000e-113 420.0
17 TraesCS3B01G417800 chr3A 95.853 217 7 1 4114 4328 635151447 635151663 3.210000e-92 350.0
18 TraesCS3B01G417800 chr3A 82.036 334 36 16 4984 5304 635152472 635152794 4.300000e-66 263.0
19 TraesCS3B01G417800 chr3A 93.567 171 5 5 3946 4112 635151129 635151297 3.350000e-62 250.0
20 TraesCS3B01G417800 chr3A 94.531 128 7 0 3822 3949 739559912 739560039 1.230000e-46 198.0
21 TraesCS3B01G417800 chr3A 91.489 141 12 0 3815 3955 710060353 710060493 1.590000e-45 195.0
22 TraesCS3B01G417800 chr3A 95.833 72 3 0 2702 2773 635150063 635150134 3.540000e-22 117.0
23 TraesCS3B01G417800 chr4D 92.949 312 21 1 1284 1595 374605008 374604698 2.380000e-123 453.0
24 TraesCS3B01G417800 chr4D 95.758 165 7 0 2540 2704 34661524 34661688 3.330000e-67 267.0
25 TraesCS3B01G417800 chr4D 96.296 162 6 0 2543 2704 64390471 64390632 3.330000e-67 267.0
26 TraesCS3B01G417800 chr4D 94.675 169 8 1 2540 2707 334164555 334164387 1.550000e-65 261.0
27 TraesCS3B01G417800 chr2A 89.423 312 26 3 1284 1595 384995 384691 2.450000e-103 387.0
28 TraesCS3B01G417800 chr2A 92.806 139 7 3 3818 3955 173999123 173999259 1.230000e-46 198.0
29 TraesCS3B01G417800 chr2A 90.541 148 11 3 3803 3948 65193137 65192991 5.720000e-45 193.0
30 TraesCS3B01G417800 chr2A 92.424 132 10 0 3819 3950 738174972 738175103 7.400000e-44 189.0
31 TraesCS3B01G417800 chr2A 89.796 147 13 2 3804 3949 559291834 559291689 2.660000e-43 187.0
32 TraesCS3B01G417800 chr5A 95.906 171 5 2 2543 2712 320214405 320214236 5.530000e-70 276.0
33 TraesCS3B01G417800 chr7D 96.319 163 6 0 2543 2705 397555077 397554915 9.250000e-68 268.0
34 TraesCS3B01G417800 chr7D 91.045 134 11 1 3817 3949 463561922 463561789 4.460000e-41 180.0
35 TraesCS3B01G417800 chr7A 95.266 169 7 1 2543 2710 494786829 494786997 3.330000e-67 267.0
36 TraesCS3B01G417800 chr2D 96.296 162 6 0 2543 2704 299891554 299891715 3.330000e-67 267.0
37 TraesCS3B01G417800 chr2D 88.889 63 5 2 5539 5599 72781251 72781313 6.010000e-10 76.8
38 TraesCS3B01G417800 chr7B 94.675 169 8 1 2543 2710 460995606 460995774 1.550000e-65 261.0
39 TraesCS3B01G417800 chr7B 94.578 166 9 0 2540 2705 102234481 102234316 2.000000e-64 257.0
40 TraesCS3B01G417800 chr1A 90.132 152 13 2 3821 3971 574666553 574666403 4.430000e-46 196.0
41 TraesCS3B01G417800 chr6B 92.537 134 10 0 3819 3952 439380604 439380737 5.720000e-45 193.0
42 TraesCS3B01G417800 chr6B 90.476 63 4 1 5539 5599 433707428 433707490 1.290000e-11 82.4
43 TraesCS3B01G417800 chr6B 88.889 63 4 2 5539 5599 93453116 93453055 2.160000e-09 75.0
44 TraesCS3B01G417800 chr6D 90.476 63 4 1 5539 5599 272646129 272646191 1.290000e-11 82.4
45 TraesCS3B01G417800 chr6D 94.340 53 2 1 5539 5591 81592037 81591986 4.650000e-11 80.5
46 TraesCS3B01G417800 chr1B 88.060 67 5 3 5535 5599 523210958 523210893 6.010000e-10 76.8
47 TraesCS3B01G417800 chr1B 92.453 53 3 1 5539 5591 179866767 179866716 2.160000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G417800 chr3B 654647169 654652767 5598 False 3730.000000 10340 90.5920 1 5599 3 chr3B.!!$F1 5598
1 TraesCS3B01G417800 chr3D 495915291 495920285 4994 False 986.428571 3035 90.6880 1 5442 7 chr3D.!!$F2 5441
2 TraesCS3B01G417800 chr3A 635147512 635152834 5322 False 811.600000 3027 91.8933 13 5524 10 chr3A.!!$F3 5511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
920 964 0.179140 CCTGCTGCGTTTGTTGTTGT 60.179 50.000 0.00 0.0 0.00 3.32 F
927 971 0.804156 CGTTTGTTGTTGTGGGTGCC 60.804 55.000 0.00 0.0 0.00 5.01 F
1722 1775 1.903183 GTCTACACAGGGCTTCTCCTT 59.097 52.381 0.00 0.0 34.31 3.36 F
1728 1781 0.322906 CAGGGCTTCTCCTTCCCAAC 60.323 60.000 0.00 0.0 42.52 3.77 F
2556 2722 0.971386 TGTTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.0 0.00 3.62 F
3831 4016 0.106719 ATTGCAATGTACCCCCTCCG 60.107 55.000 12.09 0.0 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1722 1775 0.462375 CCATGATACGGTCGTTGGGA 59.538 55.000 0.16 0.0 32.08 4.37 R
1728 1781 0.880278 CAAGGCCCATGATACGGTCG 60.880 60.000 0.00 0.0 0.00 4.79 R
2538 2704 1.264295 AGGAACGGAGGGAGTACAAC 58.736 55.000 0.00 0.0 0.00 3.32 R
3536 3721 1.350684 TGCAGTGAAGGGAATACAGCA 59.649 47.619 0.00 0.0 35.02 4.41 R
4433 4807 0.036388 GTGTCGCCCTGATGAGGAAA 60.036 55.000 0.00 0.0 42.93 3.13 R
5410 5805 0.961019 GCACTCAAATGGTTCCAGCA 59.039 50.000 0.00 0.0 0.00 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 6.073440 GGAAGATCGAGTGTATCTGTACTCTC 60.073 46.154 0.00 7.31 43.23 3.20
70 71 1.952990 TCCTGCGAAATGAAAGTGCAA 59.047 42.857 0.00 0.00 34.78 4.08
93 94 4.346418 ACTGTTCTCTGTCCAGATCAAACT 59.654 41.667 13.69 0.00 36.76 2.66
103 104 0.741221 AGATCAAACTCCTTCGCGCC 60.741 55.000 0.00 0.00 0.00 6.53
120 121 1.724654 CGCCGAACATTCCTGAAAACG 60.725 52.381 0.00 0.00 0.00 3.60
147 148 3.693085 CAGGTTCATCCACAGAATCAAGG 59.307 47.826 0.00 0.00 39.02 3.61
358 362 7.778470 AAACAAATAAAAAGAACAATCGCCA 57.222 28.000 0.00 0.00 0.00 5.69
400 412 1.908299 CAACAGGGTCCCCTTTGCC 60.908 63.158 3.51 0.00 45.70 4.52
401 413 2.091283 AACAGGGTCCCCTTTGCCT 61.091 57.895 3.51 0.00 45.70 4.75
468 484 3.874873 TGCGATCGGAGCACAAAG 58.125 55.556 18.30 0.00 40.01 2.77
469 485 2.390599 TGCGATCGGAGCACAAAGC 61.391 57.895 18.30 0.00 46.19 3.51
712 748 1.623279 CCAAGCCAATCAAATCCCCCT 60.623 52.381 0.00 0.00 0.00 4.79
920 964 0.179140 CCTGCTGCGTTTGTTGTTGT 60.179 50.000 0.00 0.00 0.00 3.32
921 965 0.915904 CTGCTGCGTTTGTTGTTGTG 59.084 50.000 0.00 0.00 0.00 3.33
927 971 0.804156 CGTTTGTTGTTGTGGGTGCC 60.804 55.000 0.00 0.00 0.00 5.01
941 985 2.029844 GTGCCGTTCCTGAGCTGTC 61.030 63.158 0.00 0.00 0.00 3.51
947 993 2.166459 CCGTTCCTGAGCTGTCTGATTA 59.834 50.000 0.00 0.00 0.00 1.75
1019 1066 4.292178 GGATCTCTCGCGGCCAGG 62.292 72.222 6.13 0.00 0.00 4.45
1215 1268 2.995872 GCACTTCTCGCTCCTCGGT 61.996 63.158 0.00 0.00 39.05 4.69
1722 1775 1.903183 GTCTACACAGGGCTTCTCCTT 59.097 52.381 0.00 0.00 34.31 3.36
1728 1781 0.322906 CAGGGCTTCTCCTTCCCAAC 60.323 60.000 0.00 0.00 42.52 3.77
1812 1865 1.978580 AGTGGTAAGAAGGTGTCTGGG 59.021 52.381 0.00 0.00 36.40 4.45
1827 1880 1.971357 TCTGGGGCCTCGATATTCTTC 59.029 52.381 0.84 0.00 0.00 2.87
1869 1922 5.233988 GTGAATCCACAGACTGGCTATATC 58.766 45.833 7.51 0.00 42.72 1.63
2122 2177 6.513806 TGCATATTGTGTTCTAAATGCACT 57.486 33.333 3.83 0.00 43.32 4.40
2239 2335 8.462016 CCCATTTCAAAGATTATCTCGTTTCTT 58.538 33.333 0.00 0.00 0.00 2.52
2284 2380 6.963242 CAGTGAACATGTGTATTGCTTACATC 59.037 38.462 0.00 0.00 42.63 3.06
2535 2701 3.018856 GTCATGGTCATTCATGCCTGAA 58.981 45.455 6.89 6.89 45.15 3.02
2538 2704 4.098807 TCATGGTCATTCATGCCTGAAATG 59.901 41.667 8.55 7.57 44.29 2.32
2539 2705 3.433343 TGGTCATTCATGCCTGAAATGT 58.567 40.909 8.55 0.00 44.29 2.71
2540 2706 3.833650 TGGTCATTCATGCCTGAAATGTT 59.166 39.130 8.55 0.00 44.29 2.71
2541 2707 4.178540 GGTCATTCATGCCTGAAATGTTG 58.821 43.478 8.55 3.00 44.29 3.33
2542 2708 4.322198 GGTCATTCATGCCTGAAATGTTGT 60.322 41.667 8.55 0.00 44.29 3.32
2543 2709 5.105797 GGTCATTCATGCCTGAAATGTTGTA 60.106 40.000 8.55 0.00 44.29 2.41
2544 2710 5.801947 GTCATTCATGCCTGAAATGTTGTAC 59.198 40.000 8.55 0.00 44.29 2.90
2545 2711 5.711506 TCATTCATGCCTGAAATGTTGTACT 59.288 36.000 8.55 0.00 44.29 2.73
2546 2712 5.627499 TTCATGCCTGAAATGTTGTACTC 57.373 39.130 1.53 0.00 38.43 2.59
2547 2713 4.009675 TCATGCCTGAAATGTTGTACTCC 58.990 43.478 0.00 0.00 0.00 3.85
2548 2714 2.790433 TGCCTGAAATGTTGTACTCCC 58.210 47.619 0.00 0.00 0.00 4.30
2549 2715 2.375174 TGCCTGAAATGTTGTACTCCCT 59.625 45.455 0.00 0.00 0.00 4.20
2550 2716 3.010420 GCCTGAAATGTTGTACTCCCTC 58.990 50.000 0.00 0.00 0.00 4.30
2551 2717 3.610911 CCTGAAATGTTGTACTCCCTCC 58.389 50.000 0.00 0.00 0.00 4.30
2552 2718 3.262420 CTGAAATGTTGTACTCCCTCCG 58.738 50.000 0.00 0.00 0.00 4.63
2553 2719 2.635915 TGAAATGTTGTACTCCCTCCGT 59.364 45.455 0.00 0.00 0.00 4.69
2554 2720 3.071892 TGAAATGTTGTACTCCCTCCGTT 59.928 43.478 0.00 0.00 0.00 4.44
2555 2721 3.329929 AATGTTGTACTCCCTCCGTTC 57.670 47.619 0.00 0.00 0.00 3.95
2556 2722 0.971386 TGTTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.00 0.00 3.62
2557 2723 1.264295 GTTGTACTCCCTCCGTTCCT 58.736 55.000 0.00 0.00 0.00 3.36
2558 2724 2.225091 TGTTGTACTCCCTCCGTTCCTA 60.225 50.000 0.00 0.00 0.00 2.94
2559 2725 2.827921 GTTGTACTCCCTCCGTTCCTAA 59.172 50.000 0.00 0.00 0.00 2.69
2560 2726 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
2561 2727 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
2562 2728 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
2563 2729 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
2564 2730 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
2565 2731 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
2566 2732 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2567 2733 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2568 2734 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2569 2735 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2570 2736 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2571 2737 7.015001 TCCCTCCGTTCCTAAATATAAGTCTTC 59.985 40.741 0.00 0.00 0.00 2.87
2572 2738 7.153315 CCTCCGTTCCTAAATATAAGTCTTCC 58.847 42.308 0.00 0.00 0.00 3.46
2573 2739 7.015389 CCTCCGTTCCTAAATATAAGTCTTCCT 59.985 40.741 0.00 0.00 0.00 3.36
2574 2740 9.075678 CTCCGTTCCTAAATATAAGTCTTCCTA 57.924 37.037 0.00 0.00 0.00 2.94
2575 2741 9.075678 TCCGTTCCTAAATATAAGTCTTCCTAG 57.924 37.037 0.00 0.00 0.00 3.02
2576 2742 9.075678 CCGTTCCTAAATATAAGTCTTCCTAGA 57.924 37.037 0.00 0.00 0.00 2.43
2591 2757 9.620259 AGTCTTCCTAGAAATTTCAATATGGAC 57.380 33.333 19.99 17.70 30.65 4.02
2592 2758 9.620259 GTCTTCCTAGAAATTTCAATATGGACT 57.380 33.333 19.99 0.00 30.65 3.85
2600 2766 9.273016 AGAAATTTCAATATGGACTACATACGG 57.727 33.333 19.99 0.00 44.41 4.02
2601 2767 9.268268 GAAATTTCAATATGGACTACATACGGA 57.732 33.333 13.40 0.00 44.41 4.69
2602 2768 9.793259 AAATTTCAATATGGACTACATACGGAT 57.207 29.630 0.00 0.00 44.41 4.18
2603 2769 8.777865 ATTTCAATATGGACTACATACGGATG 57.222 34.615 5.94 5.94 44.41 3.51
2605 2771 8.411991 TTCAATATGGACTACATACGGATGTA 57.588 34.615 19.32 19.32 44.77 2.29
2606 2772 8.589701 TCAATATGGACTACATACGGATGTAT 57.410 34.615 20.64 9.39 45.42 2.29
2607 2773 9.689501 TCAATATGGACTACATACGGATGTATA 57.310 33.333 20.64 11.30 45.42 1.47
2612 2778 8.728337 TGGACTACATACGGATGTATATAGAC 57.272 38.462 20.64 10.95 45.42 2.59
2613 2779 8.323567 TGGACTACATACGGATGTATATAGACA 58.676 37.037 20.64 12.12 45.42 3.41
2614 2780 9.339850 GGACTACATACGGATGTATATAGACAT 57.660 37.037 20.64 12.70 45.42 3.06
2645 2811 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2646 2812 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2647 2813 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2648 2814 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2649 2815 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2650 2816 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2651 2817 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2652 2818 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2653 2819 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2654 2820 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2655 2821 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2656 2822 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2657 2823 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2658 2824 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
2659 2825 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
2660 2826 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
2661 2827 5.801531 TTTGCTCCGTATGTAGTCCATAT 57.198 39.130 0.00 0.00 38.29 1.78
2662 2828 5.801531 TTGCTCCGTATGTAGTCCATATT 57.198 39.130 0.00 0.00 38.29 1.28
2663 2829 5.134202 TGCTCCGTATGTAGTCCATATTG 57.866 43.478 0.00 0.00 38.29 1.90
2664 2830 4.021456 TGCTCCGTATGTAGTCCATATTGG 60.021 45.833 0.00 0.00 38.29 3.16
2665 2831 4.219944 GCTCCGTATGTAGTCCATATTGGA 59.780 45.833 0.00 0.00 45.98 3.53
2698 2864 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2699 2865 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2700 2866 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2701 2867 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2702 2868 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2736 2907 9.632638 ATCATGGCATAGTTGTAACTTAATCTT 57.367 29.630 0.00 0.00 40.37 2.40
2756 2927 2.205022 AGGCTGTAGCTGCAAAATCA 57.795 45.000 5.84 0.00 41.70 2.57
2784 2955 6.657541 TGTCCCTTATAACAAAATCACCTGTC 59.342 38.462 0.00 0.00 0.00 3.51
2787 2958 6.187682 CCTTATAACAAAATCACCTGTCCCT 58.812 40.000 0.00 0.00 0.00 4.20
2797 2968 5.615925 ATCACCTGTCCCTTATAACACTC 57.384 43.478 0.00 0.00 0.00 3.51
2798 2969 3.446161 TCACCTGTCCCTTATAACACTCG 59.554 47.826 0.00 0.00 0.00 4.18
2818 2989 5.706369 ACTCGTGTTACAACAGAGAGAGTAT 59.294 40.000 23.30 7.83 42.56 2.12
2861 3033 4.454678 TCTGGTGTGCCATCTCATTTATC 58.545 43.478 0.00 0.00 45.05 1.75
2946 3118 8.316946 TCTTCTTATGGAGCATATATGACTTGG 58.683 37.037 17.10 0.00 0.00 3.61
2969 3141 8.958119 TGGTATTGTTGTTAGAATAGACCATC 57.042 34.615 0.00 0.00 26.87 3.51
2995 3167 5.407407 ACCACCTCACTTGAGTTGTATAG 57.593 43.478 5.53 0.00 40.48 1.31
3051 3224 8.492673 AGAATTCTGTTCGCAAGTGATAAATA 57.507 30.769 7.30 0.00 39.48 1.40
3103 3276 5.451798 GGTTTTCTTGGTGATGTTGTCATGT 60.452 40.000 0.00 0.00 39.48 3.21
3114 3287 5.530543 TGATGTTGTCATGTTGAACTAAGCA 59.469 36.000 0.00 0.00 34.06 3.91
3116 3289 5.820131 TGTTGTCATGTTGAACTAAGCAAG 58.180 37.500 0.00 0.00 0.00 4.01
3117 3290 5.215160 GTTGTCATGTTGAACTAAGCAAGG 58.785 41.667 0.00 0.00 0.00 3.61
3147 3320 1.597742 TTCTTGCTCCTGTGCTGTTC 58.402 50.000 0.00 0.00 0.00 3.18
3214 3391 9.823098 CTGAAAGATTGTCTGAATTGTTTCTAG 57.177 33.333 0.00 0.00 34.07 2.43
3225 3402 8.939929 TCTGAATTGTTTCTAGTGCTTAATCTG 58.060 33.333 0.00 0.00 32.78 2.90
3231 3408 7.272978 TGTTTCTAGTGCTTAATCTGGGTATC 58.727 38.462 0.00 0.00 0.00 2.24
3251 3429 7.339466 GGGTATCAGTTCCACTATTTGATGTTT 59.661 37.037 0.00 0.00 31.49 2.83
3285 3467 6.480524 AAAAAGTTCCTTTGTTGCTGTTTC 57.519 33.333 0.00 0.00 33.64 2.78
3368 3553 2.254546 TGCTTTCACAGGAATGTCGT 57.745 45.000 0.00 0.00 31.93 4.34
3731 3916 4.513442 GTGGCACTGATAATCACTTGGTA 58.487 43.478 11.13 0.00 0.00 3.25
3823 4008 8.795786 TTTCTGACTTTGTTATTGCAATGTAC 57.204 30.769 22.27 18.37 37.03 2.90
3824 4009 6.908825 TCTGACTTTGTTATTGCAATGTACC 58.091 36.000 22.27 7.27 37.03 3.34
3825 4010 6.019779 TGACTTTGTTATTGCAATGTACCC 57.980 37.500 22.27 5.58 37.03 3.69
3826 4011 5.047660 TGACTTTGTTATTGCAATGTACCCC 60.048 40.000 22.27 5.14 37.03 4.95
3827 4012 4.221924 ACTTTGTTATTGCAATGTACCCCC 59.778 41.667 22.27 2.61 35.76 5.40
3828 4013 3.748645 TGTTATTGCAATGTACCCCCT 57.251 42.857 22.27 0.00 0.00 4.79
3829 4014 3.626930 TGTTATTGCAATGTACCCCCTC 58.373 45.455 22.27 2.75 0.00 4.30
3830 4015 2.956333 GTTATTGCAATGTACCCCCTCC 59.044 50.000 22.27 0.00 0.00 4.30
3831 4016 0.106719 ATTGCAATGTACCCCCTCCG 60.107 55.000 12.09 0.00 0.00 4.63
3832 4017 1.493854 TTGCAATGTACCCCCTCCGT 61.494 55.000 0.00 0.00 0.00 4.69
3833 4018 1.153229 GCAATGTACCCCCTCCGTC 60.153 63.158 0.00 0.00 0.00 4.79
3834 4019 1.525442 CAATGTACCCCCTCCGTCC 59.475 63.158 0.00 0.00 0.00 4.79
3835 4020 2.062177 AATGTACCCCCTCCGTCCG 61.062 63.158 0.00 0.00 0.00 4.79
3836 4021 2.519119 AATGTACCCCCTCCGTCCGA 62.519 60.000 0.00 0.00 0.00 4.55
3837 4022 2.362889 GTACCCCCTCCGTCCGAA 60.363 66.667 0.00 0.00 0.00 4.30
3838 4023 1.984026 GTACCCCCTCCGTCCGAAA 60.984 63.158 0.00 0.00 0.00 3.46
3839 4024 1.229145 TACCCCCTCCGTCCGAAAA 60.229 57.895 0.00 0.00 0.00 2.29
3840 4025 0.618393 TACCCCCTCCGTCCGAAAAT 60.618 55.000 0.00 0.00 0.00 1.82
3841 4026 0.618393 ACCCCCTCCGTCCGAAAATA 60.618 55.000 0.00 0.00 0.00 1.40
3842 4027 0.763035 CCCCCTCCGTCCGAAAATAT 59.237 55.000 0.00 0.00 0.00 1.28
3843 4028 1.142262 CCCCCTCCGTCCGAAAATATT 59.858 52.381 0.00 0.00 0.00 1.28
3844 4029 2.422377 CCCCCTCCGTCCGAAAATATTT 60.422 50.000 0.00 0.00 0.00 1.40
3845 4030 2.616842 CCCCTCCGTCCGAAAATATTTG 59.383 50.000 0.39 0.00 0.00 2.32
3846 4031 3.275999 CCCTCCGTCCGAAAATATTTGT 58.724 45.455 0.39 0.00 0.00 2.83
3847 4032 3.311596 CCCTCCGTCCGAAAATATTTGTC 59.688 47.826 0.39 1.54 0.00 3.18
3848 4033 3.936453 CCTCCGTCCGAAAATATTTGTCA 59.064 43.478 0.39 0.00 0.00 3.58
3849 4034 4.574828 CCTCCGTCCGAAAATATTTGTCAT 59.425 41.667 0.39 0.00 0.00 3.06
3850 4035 5.277345 CCTCCGTCCGAAAATATTTGTCATC 60.277 44.000 0.39 0.00 0.00 2.92
3851 4036 5.179533 TCCGTCCGAAAATATTTGTCATCA 58.820 37.500 0.39 0.00 0.00 3.07
3852 4037 5.644206 TCCGTCCGAAAATATTTGTCATCAA 59.356 36.000 0.39 0.00 0.00 2.57
3853 4038 6.149640 TCCGTCCGAAAATATTTGTCATCAAA 59.850 34.615 0.39 0.00 45.71 2.69
3854 4039 6.804295 CCGTCCGAAAATATTTGTCATCAAAA 59.196 34.615 0.39 0.00 44.97 2.44
3855 4040 7.487829 CCGTCCGAAAATATTTGTCATCAAAAT 59.512 33.333 0.39 0.00 44.97 1.82
3856 4041 8.313227 CGTCCGAAAATATTTGTCATCAAAATG 58.687 33.333 0.39 0.00 44.97 2.32
3857 4042 8.594687 GTCCGAAAATATTTGTCATCAAAATGG 58.405 33.333 0.39 0.00 44.97 3.16
3858 4043 8.526978 TCCGAAAATATTTGTCATCAAAATGGA 58.473 29.630 0.39 0.00 44.97 3.41
3859 4044 9.316730 CCGAAAATATTTGTCATCAAAATGGAT 57.683 29.630 0.39 0.00 44.97 3.41
3867 4052 8.845413 TTTGTCATCAAAATGGATAAAAAGGG 57.155 30.769 0.00 0.00 40.08 3.95
3868 4053 6.945218 TGTCATCAAAATGGATAAAAAGGGG 58.055 36.000 0.00 0.00 33.42 4.79
3869 4054 6.500049 TGTCATCAAAATGGATAAAAAGGGGT 59.500 34.615 0.00 0.00 33.42 4.95
3870 4055 6.818142 GTCATCAAAATGGATAAAAAGGGGTG 59.182 38.462 0.00 0.00 33.42 4.61
3871 4056 6.500049 TCATCAAAATGGATAAAAAGGGGTGT 59.500 34.615 0.00 0.00 33.42 4.16
3872 4057 7.676043 TCATCAAAATGGATAAAAAGGGGTGTA 59.324 33.333 0.00 0.00 33.42 2.90
3873 4058 8.485392 CATCAAAATGGATAAAAAGGGGTGTAT 58.515 33.333 0.00 0.00 0.00 2.29
3874 4059 8.073467 TCAAAATGGATAAAAAGGGGTGTATC 57.927 34.615 0.00 0.00 0.00 2.24
3875 4060 7.898636 TCAAAATGGATAAAAAGGGGTGTATCT 59.101 33.333 0.00 0.00 0.00 1.98
3876 4061 9.196139 CAAAATGGATAAAAAGGGGTGTATCTA 57.804 33.333 0.00 0.00 0.00 1.98
3877 4062 8.996651 AAATGGATAAAAAGGGGTGTATCTAG 57.003 34.615 0.00 0.00 0.00 2.43
3878 4063 7.947782 ATGGATAAAAAGGGGTGTATCTAGA 57.052 36.000 0.00 0.00 0.00 2.43
3879 4064 7.758820 TGGATAAAAAGGGGTGTATCTAGAA 57.241 36.000 0.00 0.00 0.00 2.10
3880 4065 7.571025 TGGATAAAAAGGGGTGTATCTAGAAC 58.429 38.462 0.00 0.00 0.00 3.01
3881 4066 7.404980 TGGATAAAAAGGGGTGTATCTAGAACT 59.595 37.037 0.00 0.00 0.00 3.01
3882 4067 8.931568 GGATAAAAAGGGGTGTATCTAGAACTA 58.068 37.037 0.00 0.00 0.00 2.24
3887 4072 9.462606 AAAAGGGGTGTATCTAGAACTAAAATG 57.537 33.333 0.00 0.00 0.00 2.32
3888 4073 6.592870 AGGGGTGTATCTAGAACTAAAATGC 58.407 40.000 0.00 0.00 0.00 3.56
3889 4074 5.465724 GGGGTGTATCTAGAACTAAAATGCG 59.534 44.000 0.00 0.00 0.00 4.73
3890 4075 6.047231 GGGTGTATCTAGAACTAAAATGCGT 58.953 40.000 0.00 0.00 0.00 5.24
3891 4076 6.200475 GGGTGTATCTAGAACTAAAATGCGTC 59.800 42.308 0.00 0.00 0.00 5.19
3892 4077 6.979238 GGTGTATCTAGAACTAAAATGCGTCT 59.021 38.462 0.00 0.00 0.00 4.18
3893 4078 8.133627 GGTGTATCTAGAACTAAAATGCGTCTA 58.866 37.037 0.00 0.00 0.00 2.59
3894 4079 9.171701 GTGTATCTAGAACTAAAATGCGTCTAG 57.828 37.037 0.00 0.00 0.00 2.43
3895 4080 9.117183 TGTATCTAGAACTAAAATGCGTCTAGA 57.883 33.333 10.27 10.27 38.94 2.43
3899 4084 8.281194 TCTAGAACTAAAATGCGTCTAGATACG 58.719 37.037 0.00 0.00 45.58 3.06
3900 4085 6.793349 AGAACTAAAATGCGTCTAGATACGT 58.207 36.000 0.00 0.00 44.64 3.57
3901 4086 6.911511 AGAACTAAAATGCGTCTAGATACGTC 59.088 38.462 0.00 0.00 44.64 4.34
3902 4087 5.517904 ACTAAAATGCGTCTAGATACGTCC 58.482 41.667 0.00 0.00 44.64 4.79
3903 4088 3.366440 AAATGCGTCTAGATACGTCCC 57.634 47.619 0.00 0.00 44.64 4.46
3904 4089 1.245732 ATGCGTCTAGATACGTCCCC 58.754 55.000 0.00 0.00 44.64 4.81
3905 4090 0.820891 TGCGTCTAGATACGTCCCCC 60.821 60.000 0.00 0.00 44.64 5.40
3906 4091 0.536915 GCGTCTAGATACGTCCCCCT 60.537 60.000 0.00 0.00 44.64 4.79
3907 4092 1.978454 CGTCTAGATACGTCCCCCTT 58.022 55.000 0.00 0.00 38.07 3.95
3908 4093 2.305009 CGTCTAGATACGTCCCCCTTT 58.695 52.381 0.00 0.00 38.07 3.11
3909 4094 3.480470 CGTCTAGATACGTCCCCCTTTA 58.520 50.000 0.00 0.00 38.07 1.85
3910 4095 4.077822 CGTCTAGATACGTCCCCCTTTAT 58.922 47.826 0.00 0.00 38.07 1.40
3911 4096 4.522022 CGTCTAGATACGTCCCCCTTTATT 59.478 45.833 0.00 0.00 38.07 1.40
3912 4097 5.335504 CGTCTAGATACGTCCCCCTTTATTC 60.336 48.000 0.00 0.00 38.07 1.75
3913 4098 5.537674 GTCTAGATACGTCCCCCTTTATTCA 59.462 44.000 0.00 0.00 0.00 2.57
3914 4099 6.210984 GTCTAGATACGTCCCCCTTTATTCAT 59.789 42.308 0.00 0.00 0.00 2.57
3915 4100 5.906772 AGATACGTCCCCCTTTATTCATT 57.093 39.130 0.00 0.00 0.00 2.57
3916 4101 6.262056 AGATACGTCCCCCTTTATTCATTT 57.738 37.500 0.00 0.00 0.00 2.32
3917 4102 6.669631 AGATACGTCCCCCTTTATTCATTTT 58.330 36.000 0.00 0.00 0.00 1.82
3918 4103 6.546034 AGATACGTCCCCCTTTATTCATTTTG 59.454 38.462 0.00 0.00 0.00 2.44
3919 4104 4.668636 ACGTCCCCCTTTATTCATTTTGA 58.331 39.130 0.00 0.00 0.00 2.69
3920 4105 5.269189 ACGTCCCCCTTTATTCATTTTGAT 58.731 37.500 0.00 0.00 0.00 2.57
3921 4106 5.127031 ACGTCCCCCTTTATTCATTTTGATG 59.873 40.000 0.00 0.00 0.00 3.07
3922 4107 5.359576 CGTCCCCCTTTATTCATTTTGATGA 59.640 40.000 0.00 0.00 0.00 2.92
3923 4108 6.573434 GTCCCCCTTTATTCATTTTGATGAC 58.427 40.000 0.00 0.00 0.00 3.06
3924 4109 6.154363 GTCCCCCTTTATTCATTTTGATGACA 59.846 38.462 0.00 0.00 0.00 3.58
3925 4110 6.728164 TCCCCCTTTATTCATTTTGATGACAA 59.272 34.615 0.00 0.00 0.00 3.18
3926 4111 7.043565 CCCCCTTTATTCATTTTGATGACAAG 58.956 38.462 0.00 0.00 37.32 3.16
3927 4112 7.310609 CCCCCTTTATTCATTTTGATGACAAGT 60.311 37.037 0.00 0.00 37.32 3.16
3928 4113 8.748412 CCCCTTTATTCATTTTGATGACAAGTA 58.252 33.333 0.00 0.00 37.32 2.24
3934 4119 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
3935 4120 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
3936 4121 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
3937 4122 7.339212 TCATTTTGATGACAAGTATTTCCGGAT 59.661 33.333 4.15 0.00 37.32 4.18
3938 4123 6.435430 TTTGATGACAAGTATTTCCGGATG 57.565 37.500 4.15 0.97 37.32 3.51
3939 4124 4.450976 TGATGACAAGTATTTCCGGATGG 58.549 43.478 4.15 0.00 0.00 3.51
3940 4125 4.163268 TGATGACAAGTATTTCCGGATGGA 59.837 41.667 4.15 0.00 44.61 3.41
3941 4126 8.543352 TTTGATGACAAGTATTTCCGGATGGAG 61.543 40.741 4.15 0.00 40.39 3.86
4162 4501 2.555325 CTGTGAAGTGGTGATGCATGTT 59.445 45.455 2.46 0.00 0.00 2.71
4169 4508 3.765511 AGTGGTGATGCATGTTGCTTATT 59.234 39.130 2.46 0.00 45.31 1.40
4289 4628 0.179056 CAATATCTCCCGGTGGCGTT 60.179 55.000 0.00 0.00 0.00 4.84
4364 4738 2.621998 GCTGCTTATCATCATGGTGCTT 59.378 45.455 0.00 0.00 0.00 3.91
4433 4807 2.234661 TGACTTCGAGGTGATTGCAGAT 59.765 45.455 4.31 0.00 0.00 2.90
4622 4996 9.573133 TGACTGTGCATATATATTACATCTTCG 57.427 33.333 9.05 2.71 0.00 3.79
4906 5281 7.071196 TGTTAATAGGCTCATAGTCCAGACAAT 59.929 37.037 0.00 0.00 0.00 2.71
4907 5282 5.736951 ATAGGCTCATAGTCCAGACAATC 57.263 43.478 0.00 0.00 0.00 2.67
4943 5337 4.381411 GCTGAGCTTTTATACTAGGGTGG 58.619 47.826 0.00 0.00 0.00 4.61
4961 5355 2.121948 TGGGACATCTTCTGGATCCTG 58.878 52.381 14.23 13.20 31.27 3.86
4964 5358 3.711704 GGGACATCTTCTGGATCCTGTTA 59.288 47.826 14.23 4.84 31.27 2.41
4972 5366 6.601332 TCTTCTGGATCCTGTTAAGTGTTTT 58.399 36.000 14.23 0.00 0.00 2.43
5091 5485 1.663695 AACTGTCAGTTGTTCGTGGG 58.336 50.000 17.49 0.00 37.00 4.61
5157 5551 5.415701 GTGCTATCTTCTGGAACCATTTGAA 59.584 40.000 0.00 0.00 0.00 2.69
5192 5586 0.745845 GCCAGCTGTTCGTGGATGAT 60.746 55.000 13.81 0.00 35.67 2.45
5204 5598 7.788026 TGTTCGTGGATGATAGGTTATTTAGT 58.212 34.615 0.00 0.00 0.00 2.24
5293 5688 7.542130 GCTGTTTGTGGATGAAAGGTTATTTAG 59.458 37.037 0.00 0.00 0.00 1.85
5294 5689 8.698973 TGTTTGTGGATGAAAGGTTATTTAGA 57.301 30.769 0.00 0.00 0.00 2.10
5298 5693 8.964476 TGTGGATGAAAGGTTATTTAGAGATC 57.036 34.615 0.00 0.00 0.00 2.75
5301 5696 8.265055 TGGATGAAAGGTTATTTAGAGATCGTT 58.735 33.333 0.00 0.00 0.00 3.85
5302 5697 9.110502 GGATGAAAGGTTATTTAGAGATCGTTT 57.889 33.333 0.00 0.00 0.00 3.60
5316 5711 7.005062 AGAGATCGTTTTATATTGTGTGTGC 57.995 36.000 0.00 0.00 0.00 4.57
5317 5712 6.818644 AGAGATCGTTTTATATTGTGTGTGCT 59.181 34.615 0.00 0.00 0.00 4.40
5318 5713 7.979537 AGAGATCGTTTTATATTGTGTGTGCTA 59.020 33.333 0.00 0.00 0.00 3.49
5319 5714 8.662781 AGATCGTTTTATATTGTGTGTGCTAT 57.337 30.769 0.00 0.00 0.00 2.97
5320 5715 8.765219 AGATCGTTTTATATTGTGTGTGCTATC 58.235 33.333 0.00 0.00 0.00 2.08
5321 5716 8.662781 ATCGTTTTATATTGTGTGTGCTATCT 57.337 30.769 0.00 0.00 0.00 1.98
5322 5717 7.905126 TCGTTTTATATTGTGTGTGCTATCTG 58.095 34.615 0.00 0.00 0.00 2.90
5323 5718 7.547722 TCGTTTTATATTGTGTGTGCTATCTGT 59.452 33.333 0.00 0.00 0.00 3.41
5324 5719 7.635973 CGTTTTATATTGTGTGTGCTATCTGTG 59.364 37.037 0.00 0.00 0.00 3.66
5325 5720 7.552458 TTTATATTGTGTGTGCTATCTGTGG 57.448 36.000 0.00 0.00 0.00 4.17
5326 5721 2.183478 TTGTGTGTGCTATCTGTGGG 57.817 50.000 0.00 0.00 0.00 4.61
5327 5722 1.347062 TGTGTGTGCTATCTGTGGGA 58.653 50.000 0.00 0.00 0.00 4.37
5328 5723 1.696884 TGTGTGTGCTATCTGTGGGAA 59.303 47.619 0.00 0.00 0.00 3.97
5329 5724 2.076863 GTGTGTGCTATCTGTGGGAAC 58.923 52.381 0.00 0.00 0.00 3.62
5349 5744 7.463469 GGAACCATTTGAGTGTTTTAACTTG 57.537 36.000 0.00 0.00 0.00 3.16
5351 5746 7.222031 GGAACCATTTGAGTGTTTTAACTTGAC 59.778 37.037 0.00 0.00 0.00 3.18
5363 5758 6.127479 TGTTTTAACTTGACCATCAGCTGTTT 60.127 34.615 14.67 0.00 0.00 2.83
5369 5764 2.224843 TGACCATCAGCTGTTTGTGGAT 60.225 45.455 25.56 15.36 34.13 3.41
5370 5765 2.163010 GACCATCAGCTGTTTGTGGATG 59.837 50.000 25.56 15.97 36.10 3.51
5371 5766 2.224843 ACCATCAGCTGTTTGTGGATGA 60.225 45.455 25.56 2.97 38.03 2.92
5372 5767 2.821378 CCATCAGCTGTTTGTGGATGAA 59.179 45.455 14.67 0.00 38.03 2.57
5373 5768 3.256383 CCATCAGCTGTTTGTGGATGAAA 59.744 43.478 14.67 0.00 38.03 2.69
5374 5769 4.482386 CATCAGCTGTTTGTGGATGAAAG 58.518 43.478 14.67 0.00 38.03 2.62
5375 5770 2.886523 TCAGCTGTTTGTGGATGAAAGG 59.113 45.455 14.67 0.00 0.00 3.11
5376 5771 2.624838 CAGCTGTTTGTGGATGAAAGGT 59.375 45.455 5.25 0.00 0.00 3.50
5377 5772 3.068590 CAGCTGTTTGTGGATGAAAGGTT 59.931 43.478 5.25 0.00 0.00 3.50
5378 5773 3.706086 AGCTGTTTGTGGATGAAAGGTTT 59.294 39.130 0.00 0.00 0.00 3.27
5379 5774 4.162131 AGCTGTTTGTGGATGAAAGGTTTT 59.838 37.500 0.00 0.00 0.00 2.43
5380 5775 4.875536 GCTGTTTGTGGATGAAAGGTTTTT 59.124 37.500 0.00 0.00 0.00 1.94
5381 5776 6.045955 GCTGTTTGTGGATGAAAGGTTTTTA 58.954 36.000 0.00 0.00 0.00 1.52
5382 5777 6.200854 GCTGTTTGTGGATGAAAGGTTTTTAG 59.799 38.462 0.00 0.00 0.00 1.85
5383 5778 6.045955 TGTTTGTGGATGAAAGGTTTTTAGC 58.954 36.000 0.00 0.00 0.00 3.09
5384 5779 4.497473 TGTGGATGAAAGGTTTTTAGCG 57.503 40.909 0.00 0.00 0.00 4.26
5385 5780 4.138290 TGTGGATGAAAGGTTTTTAGCGA 58.862 39.130 0.00 0.00 0.00 4.93
5386 5781 4.764823 TGTGGATGAAAGGTTTTTAGCGAT 59.235 37.500 0.00 0.00 0.00 4.58
5387 5782 5.106317 TGTGGATGAAAGGTTTTTAGCGATC 60.106 40.000 0.00 0.00 0.00 3.69
5388 5783 4.094294 TGGATGAAAGGTTTTTAGCGATCG 59.906 41.667 11.69 11.69 0.00 3.69
5389 5784 4.094442 GGATGAAAGGTTTTTAGCGATCGT 59.906 41.667 17.81 6.21 0.00 3.73
5390 5785 5.391629 GGATGAAAGGTTTTTAGCGATCGTT 60.392 40.000 17.81 13.94 0.00 3.85
5391 5786 5.427036 TGAAAGGTTTTTAGCGATCGTTT 57.573 34.783 17.81 8.20 0.00 3.60
5392 5787 5.823353 TGAAAGGTTTTTAGCGATCGTTTT 58.177 33.333 17.81 5.60 0.00 2.43
5393 5788 6.957150 TGAAAGGTTTTTAGCGATCGTTTTA 58.043 32.000 17.81 4.59 0.00 1.52
5394 5789 7.586747 TGAAAGGTTTTTAGCGATCGTTTTAT 58.413 30.769 17.81 0.79 0.00 1.40
5395 5790 8.719648 TGAAAGGTTTTTAGCGATCGTTTTATA 58.280 29.630 17.81 0.00 0.00 0.98
5396 5791 9.712359 GAAAGGTTTTTAGCGATCGTTTTATAT 57.288 29.630 17.81 0.00 0.00 0.86
5398 5793 9.498307 AAGGTTTTTAGCGATCGTTTTATATTG 57.502 29.630 17.81 0.00 0.00 1.90
5399 5794 8.126700 AGGTTTTTAGCGATCGTTTTATATTGG 58.873 33.333 17.81 0.00 0.00 3.16
5400 5795 7.377662 GGTTTTTAGCGATCGTTTTATATTGGG 59.622 37.037 17.81 0.00 0.00 4.12
5401 5796 7.556733 TTTTAGCGATCGTTTTATATTGGGT 57.443 32.000 17.81 0.00 0.00 4.51
5402 5797 6.533819 TTAGCGATCGTTTTATATTGGGTG 57.466 37.500 17.81 0.00 0.00 4.61
5403 5798 4.448210 AGCGATCGTTTTATATTGGGTGT 58.552 39.130 17.81 0.00 0.00 4.16
5404 5799 4.272504 AGCGATCGTTTTATATTGGGTGTG 59.727 41.667 17.81 0.00 0.00 3.82
5405 5800 4.523813 CGATCGTTTTATATTGGGTGTGC 58.476 43.478 7.03 0.00 0.00 4.57
5406 5801 4.272504 CGATCGTTTTATATTGGGTGTGCT 59.727 41.667 7.03 0.00 0.00 4.40
5407 5802 5.464057 CGATCGTTTTATATTGGGTGTGCTA 59.536 40.000 7.03 0.00 0.00 3.49
5408 5803 6.147164 CGATCGTTTTATATTGGGTGTGCTAT 59.853 38.462 7.03 0.00 0.00 2.97
5409 5804 6.854496 TCGTTTTATATTGGGTGTGCTATC 57.146 37.500 0.00 0.00 0.00 2.08
5410 5805 6.588204 TCGTTTTATATTGGGTGTGCTATCT 58.412 36.000 0.00 0.00 0.00 1.98
5411 5806 6.481976 TCGTTTTATATTGGGTGTGCTATCTG 59.518 38.462 0.00 0.00 0.00 2.90
5412 5807 6.438763 GTTTTATATTGGGTGTGCTATCTGC 58.561 40.000 0.00 0.00 43.25 4.26
5429 5824 0.961019 TGCTGGAACCATTTGAGTGC 59.039 50.000 0.00 0.00 0.00 4.40
5445 5847 4.952460 TGAGTGCTTTAACTTAACCGTCT 58.048 39.130 0.00 0.00 0.00 4.18
5448 5850 2.809696 TGCTTTAACTTAACCGTCTGCC 59.190 45.455 0.00 0.00 0.00 4.85
5449 5851 3.072211 GCTTTAACTTAACCGTCTGCCT 58.928 45.455 0.00 0.00 0.00 4.75
5461 5863 2.086869 CGTCTGCCTTTTGTGGATGAT 58.913 47.619 0.00 0.00 0.00 2.45
5478 5880 6.013293 GTGGATGATAGGTTATTTAGGGAGCT 60.013 42.308 0.00 0.00 0.00 4.09
5479 5881 6.562608 TGGATGATAGGTTATTTAGGGAGCTT 59.437 38.462 0.00 0.00 0.00 3.74
5524 5926 7.538575 TGATTTACTAAAAGCTTTCTCATGCC 58.461 34.615 13.10 0.12 32.16 4.40
5525 5927 7.394359 TGATTTACTAAAAGCTTTCTCATGCCT 59.606 33.333 13.10 0.00 32.16 4.75
5526 5928 8.807948 ATTTACTAAAAGCTTTCTCATGCCTA 57.192 30.769 13.10 0.00 0.00 3.93
5527 5929 8.807948 TTTACTAAAAGCTTTCTCATGCCTAT 57.192 30.769 13.10 0.00 0.00 2.57
5528 5930 9.899661 TTTACTAAAAGCTTTCTCATGCCTATA 57.100 29.630 13.10 0.00 0.00 1.31
5529 5931 9.547753 TTACTAAAAGCTTTCTCATGCCTATAG 57.452 33.333 13.10 8.68 0.00 1.31
5530 5932 7.569240 ACTAAAAGCTTTCTCATGCCTATAGT 58.431 34.615 13.10 9.30 0.00 2.12
5531 5933 8.049721 ACTAAAAGCTTTCTCATGCCTATAGTT 58.950 33.333 13.10 0.00 0.00 2.24
5532 5934 9.547753 CTAAAAGCTTTCTCATGCCTATAGTTA 57.452 33.333 13.10 0.00 0.00 2.24
5533 5935 8.443953 AAAAGCTTTCTCATGCCTATAGTTAG 57.556 34.615 13.10 0.00 0.00 2.34
5534 5936 6.739331 AGCTTTCTCATGCCTATAGTTAGT 57.261 37.500 0.00 0.00 0.00 2.24
5535 5937 7.841282 AGCTTTCTCATGCCTATAGTTAGTA 57.159 36.000 0.00 0.00 0.00 1.82
5536 5938 8.429237 AGCTTTCTCATGCCTATAGTTAGTAT 57.571 34.615 0.00 0.00 0.00 2.12
5537 5939 8.310382 AGCTTTCTCATGCCTATAGTTAGTATG 58.690 37.037 0.00 0.00 0.00 2.39
5538 5940 8.091449 GCTTTCTCATGCCTATAGTTAGTATGT 58.909 37.037 0.00 0.00 0.00 2.29
5541 5943 9.809395 TTCTCATGCCTATAGTTAGTATGTACT 57.191 33.333 0.00 0.00 40.24 2.73
5542 5944 9.451002 TCTCATGCCTATAGTTAGTATGTACTC 57.549 37.037 0.00 0.00 37.73 2.59
5543 5945 8.577048 TCATGCCTATAGTTAGTATGTACTCC 57.423 38.462 0.00 0.00 37.73 3.85
5544 5946 7.614583 TCATGCCTATAGTTAGTATGTACTCCC 59.385 40.741 0.00 0.00 37.73 4.30
5545 5947 7.100068 TGCCTATAGTTAGTATGTACTCCCT 57.900 40.000 0.00 0.00 37.73 4.20
5546 5948 7.173722 TGCCTATAGTTAGTATGTACTCCCTC 58.826 42.308 0.00 0.00 37.73 4.30
5547 5949 7.018349 TGCCTATAGTTAGTATGTACTCCCTCT 59.982 40.741 0.00 0.00 37.73 3.69
5548 5950 7.337436 GCCTATAGTTAGTATGTACTCCCTCTG 59.663 44.444 0.00 0.00 37.73 3.35
5549 5951 8.384718 CCTATAGTTAGTATGTACTCCCTCTGT 58.615 40.741 0.00 0.00 37.73 3.41
5552 5954 6.363882 AGTTAGTATGTACTCCCTCTGTACC 58.636 44.000 0.00 0.00 39.42 3.34
5553 5955 4.875578 AGTATGTACTCCCTCTGTACCA 57.124 45.455 0.00 0.00 39.42 3.25
5554 5956 4.534797 AGTATGTACTCCCTCTGTACCAC 58.465 47.826 0.00 0.00 39.42 4.16
5555 5957 2.984435 TGTACTCCCTCTGTACCACA 57.016 50.000 0.00 0.00 39.42 4.17
5556 5958 3.247948 TGTACTCCCTCTGTACCACAA 57.752 47.619 0.00 0.00 39.42 3.33
5557 5959 3.786553 TGTACTCCCTCTGTACCACAAT 58.213 45.455 0.00 0.00 39.42 2.71
5558 5960 4.938028 TGTACTCCCTCTGTACCACAATA 58.062 43.478 0.00 0.00 39.42 1.90
5559 5961 4.708421 TGTACTCCCTCTGTACCACAATAC 59.292 45.833 0.00 0.00 39.42 1.89
5560 5962 4.062490 ACTCCCTCTGTACCACAATACT 57.938 45.455 0.00 0.00 0.00 2.12
5561 5963 4.426704 ACTCCCTCTGTACCACAATACTT 58.573 43.478 0.00 0.00 0.00 2.24
5562 5964 4.223032 ACTCCCTCTGTACCACAATACTTG 59.777 45.833 0.00 0.00 0.00 3.16
5563 5965 4.164981 TCCCTCTGTACCACAATACTTGT 58.835 43.478 0.00 0.00 46.75 3.16
5564 5966 4.595781 TCCCTCTGTACCACAATACTTGTT 59.404 41.667 0.00 0.00 43.23 2.83
5565 5967 4.695455 CCCTCTGTACCACAATACTTGTTG 59.305 45.833 0.00 0.00 43.23 3.33
5566 5968 5.305585 CCTCTGTACCACAATACTTGTTGT 58.694 41.667 2.82 2.82 43.23 3.32
5567 5969 5.763204 CCTCTGTACCACAATACTTGTTGTT 59.237 40.000 2.59 0.00 43.23 2.83
5568 5970 6.293407 CCTCTGTACCACAATACTTGTTGTTG 60.293 42.308 2.59 0.00 43.23 3.33
5569 5971 5.529430 TCTGTACCACAATACTTGTTGTTGG 59.471 40.000 2.59 0.00 43.23 3.77
5570 5972 4.580995 TGTACCACAATACTTGTTGTTGGG 59.419 41.667 2.59 0.00 43.23 4.12
5571 5973 3.658757 CCACAATACTTGTTGTTGGGG 57.341 47.619 5.79 5.79 42.93 4.96
5573 5975 4.927978 CACAATACTTGTTGTTGGGGAA 57.072 40.909 0.00 0.00 43.23 3.97
5574 5976 5.269505 CACAATACTTGTTGTTGGGGAAA 57.730 39.130 0.00 0.00 43.23 3.13
5575 5977 5.047188 CACAATACTTGTTGTTGGGGAAAC 58.953 41.667 0.00 0.00 43.23 2.78
5576 5978 4.959839 ACAATACTTGTTGTTGGGGAAACT 59.040 37.500 0.00 0.00 42.22 2.66
5577 5979 5.423931 ACAATACTTGTTGTTGGGGAAACTT 59.576 36.000 0.00 0.00 42.22 2.66
5578 5980 3.885724 ACTTGTTGTTGGGGAAACTTG 57.114 42.857 0.00 0.00 39.70 3.16
5579 5981 3.169908 ACTTGTTGTTGGGGAAACTTGT 58.830 40.909 0.00 0.00 39.70 3.16
5580 5982 4.345854 ACTTGTTGTTGGGGAAACTTGTA 58.654 39.130 0.00 0.00 39.70 2.41
5581 5983 4.158949 ACTTGTTGTTGGGGAAACTTGTAC 59.841 41.667 0.00 0.00 39.70 2.90
5582 5984 3.970842 TGTTGTTGGGGAAACTTGTACT 58.029 40.909 0.00 0.00 39.70 2.73
5583 5985 5.113446 TGTTGTTGGGGAAACTTGTACTA 57.887 39.130 0.00 0.00 39.70 1.82
5584 5986 5.127491 TGTTGTTGGGGAAACTTGTACTAG 58.873 41.667 2.56 2.56 39.70 2.57
5585 5987 5.128205 GTTGTTGGGGAAACTTGTACTAGT 58.872 41.667 3.98 3.98 39.70 2.57
5586 5988 6.126825 TGTTGTTGGGGAAACTTGTACTAGTA 60.127 38.462 10.43 0.00 39.70 1.82
5587 5989 6.691255 TGTTGGGGAAACTTGTACTAGTAT 57.309 37.500 10.43 0.00 39.70 2.12
5588 5990 7.081857 TGTTGGGGAAACTTGTACTAGTATT 57.918 36.000 10.43 7.33 39.70 1.89
5589 5991 7.163441 TGTTGGGGAAACTTGTACTAGTATTC 58.837 38.462 10.43 14.19 39.70 1.75
5590 5992 6.303903 TGGGGAAACTTGTACTAGTATTCC 57.696 41.667 25.16 25.16 36.12 3.01
5591 5993 5.786457 TGGGGAAACTTGTACTAGTATTCCA 59.214 40.000 29.12 22.20 37.22 3.53
5592 5994 6.272792 TGGGGAAACTTGTACTAGTATTCCAA 59.727 38.462 29.12 21.74 37.22 3.53
5593 5995 6.596888 GGGGAAACTTGTACTAGTATTCCAAC 59.403 42.308 29.12 23.17 37.22 3.77
5594 5996 7.392418 GGGAAACTTGTACTAGTATTCCAACT 58.608 38.462 29.12 9.49 37.22 3.16
5595 5997 8.534496 GGGAAACTTGTACTAGTATTCCAACTA 58.466 37.037 29.12 5.29 37.22 2.24
5596 5998 9.363763 GGAAACTTGTACTAGTATTCCAACTAC 57.636 37.037 26.56 4.11 36.46 2.73
5597 5999 9.918630 GAAACTTGTACTAGTATTCCAACTACA 57.081 33.333 10.43 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.376808 ACACTCGATCTTCCTTGCTG 57.623 50.000 0.00 0.00 0.00 4.41
51 52 2.053627 GTTGCACTTTCATTTCGCAGG 58.946 47.619 0.00 0.00 33.48 4.85
63 64 2.092968 TGGACAGAGAACAGTTGCACTT 60.093 45.455 0.00 0.00 0.00 3.16
70 71 4.346418 AGTTTGATCTGGACAGAGAACAGT 59.654 41.667 19.15 1.29 41.33 3.55
75 76 3.784178 AGGAGTTTGATCTGGACAGAGA 58.216 45.455 8.14 0.00 41.33 3.10
93 94 2.047655 AATGTTCGGCGCGAAGGA 60.048 55.556 12.10 0.00 46.54 3.36
103 104 2.679355 TGCGTTTTCAGGAATGTTCG 57.321 45.000 0.00 0.00 0.00 3.95
120 121 0.524862 CTGTGGATGAACCTGCTTGC 59.475 55.000 0.00 0.00 39.86 4.01
147 148 1.225855 TTGTGCATGTGGTTCGAGTC 58.774 50.000 0.00 0.00 0.00 3.36
390 402 1.602237 GTCATCGAGGCAAAGGGGA 59.398 57.895 0.00 0.00 0.00 4.81
400 412 0.171231 TTCTCACTGGCGTCATCGAG 59.829 55.000 9.03 9.03 39.71 4.04
401 413 0.109272 GTTCTCACTGGCGTCATCGA 60.109 55.000 0.00 0.00 39.71 3.59
464 480 0.657368 GCGACGACTTTGTGGCTTTG 60.657 55.000 0.00 0.00 40.03 2.77
465 481 1.647084 GCGACGACTTTGTGGCTTT 59.353 52.632 0.00 0.00 40.03 3.51
466 482 2.251642 GGCGACGACTTTGTGGCTT 61.252 57.895 0.00 0.00 42.42 4.35
467 483 2.665185 GGCGACGACTTTGTGGCT 60.665 61.111 0.00 0.00 42.42 4.75
468 484 3.723348 GGGCGACGACTTTGTGGC 61.723 66.667 0.00 0.00 42.11 5.01
712 748 0.178861 AGGAGGAGGAGGAAGGCAAA 60.179 55.000 0.00 0.00 0.00 3.68
880 924 2.571757 CGCGGAGGCTACAACAGA 59.428 61.111 0.00 0.00 36.88 3.41
902 946 0.915904 CACAACAACAAACGCAGCAG 59.084 50.000 0.00 0.00 0.00 4.24
906 950 0.109086 CACCCACAACAACAAACGCA 60.109 50.000 0.00 0.00 0.00 5.24
907 951 1.417577 GCACCCACAACAACAAACGC 61.418 55.000 0.00 0.00 0.00 4.84
908 952 0.804156 GGCACCCACAACAACAAACG 60.804 55.000 0.00 0.00 0.00 3.60
909 953 0.804156 CGGCACCCACAACAACAAAC 60.804 55.000 0.00 0.00 0.00 2.93
910 954 1.251527 ACGGCACCCACAACAACAAA 61.252 50.000 0.00 0.00 0.00 2.83
911 955 1.251527 AACGGCACCCACAACAACAA 61.252 50.000 0.00 0.00 0.00 2.83
920 964 4.329545 GCTCAGGAACGGCACCCA 62.330 66.667 0.00 0.00 0.00 4.51
921 965 4.021925 AGCTCAGGAACGGCACCC 62.022 66.667 0.00 0.00 0.00 4.61
927 971 2.376808 AATCAGACAGCTCAGGAACG 57.623 50.000 0.00 0.00 0.00 3.95
941 985 1.139058 ACCGCAACCCTAGCTAATCAG 59.861 52.381 0.00 0.00 0.00 2.90
947 993 1.375523 CGAAACCGCAACCCTAGCT 60.376 57.895 0.00 0.00 0.00 3.32
967 1013 0.695924 TTCTCCCCAAATCGCCTCAA 59.304 50.000 0.00 0.00 0.00 3.02
1285 1338 3.844090 GGACGAGCAGGAGGAGGC 61.844 72.222 0.00 0.00 0.00 4.70
1659 1712 0.912486 AGTAGGGCTGGACATTGACC 59.088 55.000 0.00 0.00 0.00 4.02
1722 1775 0.462375 CCATGATACGGTCGTTGGGA 59.538 55.000 0.16 0.00 32.08 4.37
1728 1781 0.880278 CAAGGCCCATGATACGGTCG 60.880 60.000 0.00 0.00 0.00 4.79
1869 1922 3.557595 GGTCCTCAAGCTTGTCATAATCG 59.442 47.826 25.19 6.04 0.00 3.34
2070 2123 9.314321 CAAACTATCACCGTGAGATAACTAAAT 57.686 33.333 7.41 0.00 0.00 1.40
2122 2177 3.780294 AGTTATTGTGAGAGCCACCCATA 59.220 43.478 0.00 0.00 45.09 2.74
2129 2184 5.233988 CCAGCTATAGTTATTGTGAGAGCC 58.766 45.833 0.84 0.00 0.00 4.70
2253 2349 5.586243 GCAATACACATGTTCACTGGACTAT 59.414 40.000 0.00 0.00 0.00 2.12
2304 2457 7.011950 CCAAATAATATTACCTCACGTCTTGCA 59.988 37.037 0.00 0.00 0.00 4.08
2372 2533 5.558818 TGAGTTAATGCATTGGCCAAAAAT 58.441 33.333 24.71 10.33 40.13 1.82
2374 2535 4.613925 TGAGTTAATGCATTGGCCAAAA 57.386 36.364 24.71 11.92 40.13 2.44
2535 2701 2.027469 GGAACGGAGGGAGTACAACATT 60.027 50.000 0.00 0.00 0.00 2.71
2538 2704 1.264295 AGGAACGGAGGGAGTACAAC 58.736 55.000 0.00 0.00 0.00 3.32
2539 2705 2.905415 TAGGAACGGAGGGAGTACAA 57.095 50.000 0.00 0.00 0.00 2.41
2540 2706 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
2541 2707 7.232330 ACTTATATTTAGGAACGGAGGGAGTAC 59.768 40.741 0.00 0.00 0.00 2.73
2542 2708 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
2543 2709 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2544 2710 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2545 2711 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2546 2712 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2547 2713 7.015389 AGGAAGACTTATATTTAGGAACGGAGG 59.985 40.741 0.00 0.00 0.00 4.30
2548 2714 7.953752 AGGAAGACTTATATTTAGGAACGGAG 58.046 38.462 0.00 0.00 0.00 4.63
2549 2715 7.909485 AGGAAGACTTATATTTAGGAACGGA 57.091 36.000 0.00 0.00 0.00 4.69
2550 2716 9.075678 TCTAGGAAGACTTATATTTAGGAACGG 57.924 37.037 0.00 0.00 0.00 4.44
2565 2731 9.620259 GTCCATATTGAAATTTCTAGGAAGACT 57.380 33.333 18.64 0.00 0.00 3.24
2566 2732 9.620259 AGTCCATATTGAAATTTCTAGGAAGAC 57.380 33.333 18.64 16.54 0.00 3.01
2574 2740 9.273016 CCGTATGTAGTCCATATTGAAATTTCT 57.727 33.333 18.64 2.61 38.29 2.52
2575 2741 9.268268 TCCGTATGTAGTCCATATTGAAATTTC 57.732 33.333 11.41 11.41 38.29 2.17
2576 2742 9.793259 ATCCGTATGTAGTCCATATTGAAATTT 57.207 29.630 0.00 0.00 38.29 1.82
2577 2743 9.219603 CATCCGTATGTAGTCCATATTGAAATT 57.780 33.333 0.00 0.00 38.29 1.82
2578 2744 8.375506 ACATCCGTATGTAGTCCATATTGAAAT 58.624 33.333 0.00 0.00 44.66 2.17
2579 2745 7.732025 ACATCCGTATGTAGTCCATATTGAAA 58.268 34.615 0.00 0.00 44.66 2.69
2580 2746 7.297936 ACATCCGTATGTAGTCCATATTGAA 57.702 36.000 0.00 0.00 44.66 2.69
2581 2747 6.911250 ACATCCGTATGTAGTCCATATTGA 57.089 37.500 0.00 0.00 44.66 2.57
2623 2789 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2624 2790 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2625 2791 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2626 2792 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2627 2793 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2628 2794 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2629 2795 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2630 2796 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2631 2797 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2632 2798 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2633 2799 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2634 2800 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
2635 2801 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
2636 2802 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
2637 2803 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
2638 2804 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
2639 2805 5.801531 ATATGGACTACATACGGAGCAAA 57.198 39.130 0.00 0.00 44.41 3.68
2640 2806 5.510690 CCAATATGGACTACATACGGAGCAA 60.511 44.000 0.00 0.00 44.41 3.91
2641 2807 4.021456 CCAATATGGACTACATACGGAGCA 60.021 45.833 0.00 0.00 44.41 4.26
2642 2808 4.219944 TCCAATATGGACTACATACGGAGC 59.780 45.833 0.00 0.00 42.67 4.70
2643 2809 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
2653 2819 9.620259 GTCTTTTAAGAGATTCCAATATGGACT 57.380 33.333 0.00 0.00 40.22 3.85
2654 2820 9.620259 AGTCTTTTAAGAGATTCCAATATGGAC 57.380 33.333 0.00 0.00 40.22 4.02
2673 2839 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2674 2840 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2675 2841 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2676 2842 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2677 2843 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2678 2844 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2679 2845 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2680 2846 8.591072 CAATACTCCCTCCGTTCCTAAATATAA 58.409 37.037 0.00 0.00 0.00 0.98
2681 2847 7.731688 ACAATACTCCCTCCGTTCCTAAATATA 59.268 37.037 0.00 0.00 0.00 0.86
2682 2848 6.557633 ACAATACTCCCTCCGTTCCTAAATAT 59.442 38.462 0.00 0.00 0.00 1.28
2683 2849 5.901276 ACAATACTCCCTCCGTTCCTAAATA 59.099 40.000 0.00 0.00 0.00 1.40
2684 2850 4.720273 ACAATACTCCCTCCGTTCCTAAAT 59.280 41.667 0.00 0.00 0.00 1.40
2685 2851 4.098894 ACAATACTCCCTCCGTTCCTAAA 58.901 43.478 0.00 0.00 0.00 1.85
2686 2852 3.716431 ACAATACTCCCTCCGTTCCTAA 58.284 45.455 0.00 0.00 0.00 2.69
2687 2853 3.393426 ACAATACTCCCTCCGTTCCTA 57.607 47.619 0.00 0.00 0.00 2.94
2688 2854 2.249309 ACAATACTCCCTCCGTTCCT 57.751 50.000 0.00 0.00 0.00 3.36
2689 2855 3.345508 AAACAATACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
2690 2856 5.667466 TGATAAACAATACTCCCTCCGTTC 58.333 41.667 0.00 0.00 0.00 3.95
2691 2857 5.687166 TGATAAACAATACTCCCTCCGTT 57.313 39.130 0.00 0.00 0.00 4.44
2692 2858 5.454755 CCATGATAAACAATACTCCCTCCGT 60.455 44.000 0.00 0.00 0.00 4.69
2693 2859 4.997395 CCATGATAAACAATACTCCCTCCG 59.003 45.833 0.00 0.00 0.00 4.63
2694 2860 4.762251 GCCATGATAAACAATACTCCCTCC 59.238 45.833 0.00 0.00 0.00 4.30
2695 2861 5.376625 TGCCATGATAAACAATACTCCCTC 58.623 41.667 0.00 0.00 0.00 4.30
2696 2862 5.387113 TGCCATGATAAACAATACTCCCT 57.613 39.130 0.00 0.00 0.00 4.20
2697 2863 6.942576 ACTATGCCATGATAAACAATACTCCC 59.057 38.462 0.00 0.00 0.00 4.30
2698 2864 7.986085 ACTATGCCATGATAAACAATACTCC 57.014 36.000 0.00 0.00 0.00 3.85
2699 2865 8.840321 ACAACTATGCCATGATAAACAATACTC 58.160 33.333 0.00 0.00 0.00 2.59
2700 2866 8.752005 ACAACTATGCCATGATAAACAATACT 57.248 30.769 0.00 0.00 0.00 2.12
2736 2907 3.009723 GTGATTTTGCAGCTACAGCCTA 58.990 45.455 0.00 0.00 43.38 3.93
2756 2927 5.949952 GGTGATTTTGTTATAAGGGACAGGT 59.050 40.000 0.00 0.00 0.00 4.00
2797 2968 6.861572 TGAAATACTCTCTCTGTTGTAACACG 59.138 38.462 0.00 0.00 34.70 4.49
2798 2969 8.589335 TTGAAATACTCTCTCTGTTGTAACAC 57.411 34.615 0.00 0.00 34.70 3.32
2809 2980 5.928839 TGCTTGTCACTTGAAATACTCTCTC 59.071 40.000 0.00 0.00 0.00 3.20
2818 2989 7.147312 CCAGAAAATATGCTTGTCACTTGAAA 58.853 34.615 0.00 0.00 0.00 2.69
2861 3033 9.692749 ATCAGCTAATTAAGAAATGATGCAATG 57.307 29.630 0.00 0.00 0.00 2.82
3065 3238 6.048509 CCAAGAAAACCAACAAGTAGCATTT 58.951 36.000 0.00 0.00 0.00 2.32
3066 3239 5.128663 ACCAAGAAAACCAACAAGTAGCATT 59.871 36.000 0.00 0.00 0.00 3.56
3079 3252 4.647424 TGACAACATCACCAAGAAAACC 57.353 40.909 0.00 0.00 29.99 3.27
3114 3287 7.015584 ACAGGAGCAAGAATAAATGTTTTCCTT 59.984 33.333 0.00 0.00 0.00 3.36
3116 3289 6.587608 CACAGGAGCAAGAATAAATGTTTTCC 59.412 38.462 0.00 0.00 0.00 3.13
3117 3290 6.089954 GCACAGGAGCAAGAATAAATGTTTTC 59.910 38.462 0.00 0.00 0.00 2.29
3147 3320 2.874849 ACAAAACGTGAAAGTGCAAGG 58.125 42.857 0.00 0.00 0.00 3.61
3214 3391 4.816925 GGAACTGATACCCAGATTAAGCAC 59.183 45.833 0.00 0.00 45.78 4.40
3272 3454 4.799564 AAGTTCAGGAAACAGCAACAAA 57.200 36.364 0.00 0.00 40.56 2.83
3285 3467 3.859386 GCAAAGTGTGACAAAAGTTCAGG 59.141 43.478 0.00 0.00 0.00 3.86
3398 3583 5.927115 CCTTAGGTTCTTGTGAGTAGTTGAC 59.073 44.000 0.00 0.00 0.00 3.18
3536 3721 1.350684 TGCAGTGAAGGGAATACAGCA 59.649 47.619 0.00 0.00 35.02 4.41
3731 3916 3.953542 AAAGTTCTGAGGTCCCAAAGT 57.046 42.857 0.00 0.00 0.00 2.66
3823 4008 0.763035 ATATTTTCGGACGGAGGGGG 59.237 55.000 0.00 0.00 0.00 5.40
3824 4009 2.616842 CAAATATTTTCGGACGGAGGGG 59.383 50.000 0.00 0.00 0.00 4.79
3825 4010 3.275999 ACAAATATTTTCGGACGGAGGG 58.724 45.455 0.00 0.00 0.00 4.30
3826 4011 3.936453 TGACAAATATTTTCGGACGGAGG 59.064 43.478 0.00 0.00 0.00 4.30
3827 4012 5.293324 TGATGACAAATATTTTCGGACGGAG 59.707 40.000 0.00 0.00 0.00 4.63
3828 4013 5.179533 TGATGACAAATATTTTCGGACGGA 58.820 37.500 0.00 0.00 0.00 4.69
3829 4014 5.478233 TGATGACAAATATTTTCGGACGG 57.522 39.130 0.00 0.00 0.00 4.79
3830 4015 7.789341 TTTTGATGACAAATATTTTCGGACG 57.211 32.000 0.00 0.00 43.99 4.79
3831 4016 8.594687 CCATTTTGATGACAAATATTTTCGGAC 58.405 33.333 0.00 0.00 43.99 4.79
3832 4017 8.526978 TCCATTTTGATGACAAATATTTTCGGA 58.473 29.630 0.00 0.00 43.99 4.55
3833 4018 8.700722 TCCATTTTGATGACAAATATTTTCGG 57.299 30.769 0.00 0.00 43.99 4.30
3841 4026 9.452287 CCCTTTTTATCCATTTTGATGACAAAT 57.548 29.630 0.00 0.00 43.99 2.32
3842 4027 7.882271 CCCCTTTTTATCCATTTTGATGACAAA 59.118 33.333 0.00 0.00 43.10 2.83
3843 4028 7.017056 ACCCCTTTTTATCCATTTTGATGACAA 59.983 33.333 0.00 0.00 0.00 3.18
3844 4029 6.500049 ACCCCTTTTTATCCATTTTGATGACA 59.500 34.615 0.00 0.00 0.00 3.58
3845 4030 6.818142 CACCCCTTTTTATCCATTTTGATGAC 59.182 38.462 0.00 0.00 0.00 3.06
3846 4031 6.500049 ACACCCCTTTTTATCCATTTTGATGA 59.500 34.615 0.00 0.00 0.00 2.92
3847 4032 6.710278 ACACCCCTTTTTATCCATTTTGATG 58.290 36.000 0.00 0.00 0.00 3.07
3848 4033 6.950860 ACACCCCTTTTTATCCATTTTGAT 57.049 33.333 0.00 0.00 0.00 2.57
3849 4034 7.898636 AGATACACCCCTTTTTATCCATTTTGA 59.101 33.333 0.00 0.00 0.00 2.69
3850 4035 8.078060 AGATACACCCCTTTTTATCCATTTTG 57.922 34.615 0.00 0.00 0.00 2.44
3851 4036 9.421399 CTAGATACACCCCTTTTTATCCATTTT 57.579 33.333 0.00 0.00 0.00 1.82
3852 4037 8.787818 TCTAGATACACCCCTTTTTATCCATTT 58.212 33.333 0.00 0.00 0.00 2.32
3853 4038 8.344939 TCTAGATACACCCCTTTTTATCCATT 57.655 34.615 0.00 0.00 0.00 3.16
3854 4039 7.947782 TCTAGATACACCCCTTTTTATCCAT 57.052 36.000 0.00 0.00 0.00 3.41
3855 4040 7.404980 AGTTCTAGATACACCCCTTTTTATCCA 59.595 37.037 0.00 0.00 0.00 3.41
3856 4041 7.803131 AGTTCTAGATACACCCCTTTTTATCC 58.197 38.462 0.00 0.00 0.00 2.59
3861 4046 9.462606 CATTTTAGTTCTAGATACACCCCTTTT 57.537 33.333 0.00 0.00 0.00 2.27
3862 4047 7.556635 GCATTTTAGTTCTAGATACACCCCTTT 59.443 37.037 0.00 0.00 0.00 3.11
3863 4048 7.054751 GCATTTTAGTTCTAGATACACCCCTT 58.945 38.462 0.00 0.00 0.00 3.95
3864 4049 6.592870 GCATTTTAGTTCTAGATACACCCCT 58.407 40.000 0.00 0.00 0.00 4.79
3865 4050 5.465724 CGCATTTTAGTTCTAGATACACCCC 59.534 44.000 0.00 0.00 0.00 4.95
3866 4051 6.047231 ACGCATTTTAGTTCTAGATACACCC 58.953 40.000 0.00 0.00 0.00 4.61
3867 4052 6.979238 AGACGCATTTTAGTTCTAGATACACC 59.021 38.462 0.00 0.00 0.00 4.16
3868 4053 7.988904 AGACGCATTTTAGTTCTAGATACAC 57.011 36.000 0.00 0.00 0.00 2.90
3869 4054 9.117183 TCTAGACGCATTTTAGTTCTAGATACA 57.883 33.333 0.00 0.00 32.48 2.29
3873 4058 8.281194 CGTATCTAGACGCATTTTAGTTCTAGA 58.719 37.037 8.64 8.64 38.94 2.43
3874 4059 8.068977 ACGTATCTAGACGCATTTTAGTTCTAG 58.931 37.037 0.00 0.00 46.87 2.43
3875 4060 7.923888 ACGTATCTAGACGCATTTTAGTTCTA 58.076 34.615 0.00 0.00 46.87 2.10
3876 4061 6.793349 ACGTATCTAGACGCATTTTAGTTCT 58.207 36.000 0.00 0.00 46.87 3.01
3877 4062 6.142002 GGACGTATCTAGACGCATTTTAGTTC 59.858 42.308 0.00 0.00 46.87 3.01
3878 4063 5.975939 GGACGTATCTAGACGCATTTTAGTT 59.024 40.000 0.00 0.00 46.87 2.24
3879 4064 5.506982 GGGACGTATCTAGACGCATTTTAGT 60.507 44.000 0.00 0.00 46.87 2.24
3880 4065 4.916249 GGGACGTATCTAGACGCATTTTAG 59.084 45.833 0.00 0.00 46.87 1.85
3881 4066 4.261741 GGGGACGTATCTAGACGCATTTTA 60.262 45.833 0.00 0.00 46.87 1.52
3882 4067 3.492137 GGGGACGTATCTAGACGCATTTT 60.492 47.826 0.00 0.00 46.87 1.82
3883 4068 2.035576 GGGGACGTATCTAGACGCATTT 59.964 50.000 0.00 0.00 46.87 2.32
3884 4069 1.612463 GGGGACGTATCTAGACGCATT 59.388 52.381 0.00 0.00 46.87 3.56
3885 4070 1.245732 GGGGACGTATCTAGACGCAT 58.754 55.000 0.00 0.00 46.87 4.73
3886 4071 0.820891 GGGGGACGTATCTAGACGCA 60.821 60.000 0.00 0.00 46.87 5.24
3887 4072 0.536915 AGGGGGACGTATCTAGACGC 60.537 60.000 0.00 0.00 46.87 5.19
3889 4074 5.537674 TGAATAAAGGGGGACGTATCTAGAC 59.462 44.000 0.00 0.00 0.00 2.59
3890 4075 5.708544 TGAATAAAGGGGGACGTATCTAGA 58.291 41.667 0.00 0.00 0.00 2.43
3891 4076 6.607004 ATGAATAAAGGGGGACGTATCTAG 57.393 41.667 0.00 0.00 0.00 2.43
3892 4077 7.383156 AAATGAATAAAGGGGGACGTATCTA 57.617 36.000 0.00 0.00 0.00 1.98
3893 4078 5.906772 AATGAATAAAGGGGGACGTATCT 57.093 39.130 0.00 0.00 0.00 1.98
3894 4079 6.544564 TCAAAATGAATAAAGGGGGACGTATC 59.455 38.462 0.00 0.00 0.00 2.24
3895 4080 6.428295 TCAAAATGAATAAAGGGGGACGTAT 58.572 36.000 0.00 0.00 0.00 3.06
3896 4081 5.817784 TCAAAATGAATAAAGGGGGACGTA 58.182 37.500 0.00 0.00 0.00 3.57
3897 4082 4.668636 TCAAAATGAATAAAGGGGGACGT 58.331 39.130 0.00 0.00 0.00 4.34
3898 4083 5.359576 TCATCAAAATGAATAAAGGGGGACG 59.640 40.000 0.00 0.00 38.97 4.79
3899 4084 6.154363 TGTCATCAAAATGAATAAAGGGGGAC 59.846 38.462 0.00 0.00 43.42 4.46
3900 4085 6.259893 TGTCATCAAAATGAATAAAGGGGGA 58.740 36.000 0.00 0.00 43.42 4.81
3901 4086 6.543430 TGTCATCAAAATGAATAAAGGGGG 57.457 37.500 0.00 0.00 43.42 5.40
3902 4087 7.614494 ACTTGTCATCAAAATGAATAAAGGGG 58.386 34.615 9.60 0.00 43.42 4.79
3909 4094 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
3910 4095 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
3911 4096 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
3912 4097 6.851609 TCCGGAAATACTTGTCATCAAAATG 58.148 36.000 0.00 0.00 32.87 2.32
3913 4098 7.416664 CCATCCGGAAATACTTGTCATCAAAAT 60.417 37.037 9.01 0.00 32.87 1.82
3914 4099 6.127758 CCATCCGGAAATACTTGTCATCAAAA 60.128 38.462 9.01 0.00 32.87 2.44
3915 4100 5.356751 CCATCCGGAAATACTTGTCATCAAA 59.643 40.000 9.01 0.00 32.87 2.69
3916 4101 4.881273 CCATCCGGAAATACTTGTCATCAA 59.119 41.667 9.01 0.00 0.00 2.57
3917 4102 4.163268 TCCATCCGGAAATACTTGTCATCA 59.837 41.667 9.01 0.00 38.83 3.07
3918 4103 4.703897 TCCATCCGGAAATACTTGTCATC 58.296 43.478 9.01 0.00 38.83 2.92
3919 4104 4.444876 CCTCCATCCGGAAATACTTGTCAT 60.445 45.833 9.01 0.00 42.21 3.06
3920 4105 3.118408 CCTCCATCCGGAAATACTTGTCA 60.118 47.826 9.01 0.00 42.21 3.58
3921 4106 3.467803 CCTCCATCCGGAAATACTTGTC 58.532 50.000 9.01 0.00 42.21 3.18
3922 4107 2.172717 CCCTCCATCCGGAAATACTTGT 59.827 50.000 9.01 0.00 42.21 3.16
3923 4108 2.438021 TCCCTCCATCCGGAAATACTTG 59.562 50.000 9.01 0.00 42.21 3.16
3924 4109 2.706190 CTCCCTCCATCCGGAAATACTT 59.294 50.000 9.01 0.00 42.21 2.24
3925 4110 2.330216 CTCCCTCCATCCGGAAATACT 58.670 52.381 9.01 0.00 42.21 2.12
3926 4111 2.047830 ACTCCCTCCATCCGGAAATAC 58.952 52.381 9.01 0.00 42.21 1.89
3927 4112 2.489528 ACTCCCTCCATCCGGAAATA 57.510 50.000 9.01 0.00 42.21 1.40
3928 4113 2.489528 TACTCCCTCCATCCGGAAAT 57.510 50.000 9.01 0.00 42.21 2.17
3929 4114 2.326428 GATACTCCCTCCATCCGGAAA 58.674 52.381 9.01 0.00 42.21 3.13
3930 4115 1.219469 TGATACTCCCTCCATCCGGAA 59.781 52.381 9.01 0.00 42.21 4.30
3931 4116 0.857675 TGATACTCCCTCCATCCGGA 59.142 55.000 6.61 6.61 39.79 5.14
3932 4117 1.620819 CTTGATACTCCCTCCATCCGG 59.379 57.143 0.00 0.00 0.00 5.14
3933 4118 2.320781 ACTTGATACTCCCTCCATCCG 58.679 52.381 0.00 0.00 0.00 4.18
3934 4119 5.046231 GGAATACTTGATACTCCCTCCATCC 60.046 48.000 0.00 0.00 0.00 3.51
3935 4120 5.046231 GGGAATACTTGATACTCCCTCCATC 60.046 48.000 0.00 0.00 42.25 3.51
3936 4121 4.846940 GGGAATACTTGATACTCCCTCCAT 59.153 45.833 0.00 0.00 42.25 3.41
3937 4122 4.232091 GGGAATACTTGATACTCCCTCCA 58.768 47.826 0.00 0.00 42.25 3.86
3938 4123 4.893829 GGGAATACTTGATACTCCCTCC 57.106 50.000 0.00 0.00 42.25 4.30
3988 4173 8.821686 ATTGTCCATTAGTCAATATGAAACCA 57.178 30.769 0.00 0.00 31.30 3.67
4119 4308 9.787532 CACAGAAAACATTTACAAGAGAAAGAA 57.212 29.630 0.00 0.00 0.00 2.52
4120 4309 9.173021 TCACAGAAAACATTTACAAGAGAAAGA 57.827 29.630 0.00 0.00 0.00 2.52
4121 4310 9.787532 TTCACAGAAAACATTTACAAGAGAAAG 57.212 29.630 0.00 0.00 0.00 2.62
4162 4501 8.579850 AATGATGGAGAACAACTTAATAAGCA 57.420 30.769 0.00 0.00 0.00 3.91
4169 4508 7.040478 CCTGTCAAAATGATGGAGAACAACTTA 60.040 37.037 0.00 0.00 0.00 2.24
4318 4657 7.326063 GCAGGCAAATACTTACAGTAAACAAAG 59.674 37.037 0.00 0.00 33.89 2.77
4433 4807 0.036388 GTGTCGCCCTGATGAGGAAA 60.036 55.000 0.00 0.00 42.93 3.13
4622 4996 4.792068 TGATAAATCTGGACAATCCCCAC 58.208 43.478 0.00 0.00 35.03 4.61
4837 5212 7.740346 CGCGACAAAACATATCATATAAGAACC 59.260 37.037 0.00 0.00 0.00 3.62
4906 5281 2.679837 GCTCAGCGAATTTCATGGAAGA 59.320 45.455 0.00 0.00 0.00 2.87
4907 5282 2.681848 AGCTCAGCGAATTTCATGGAAG 59.318 45.455 0.00 0.00 0.00 3.46
4943 5337 3.922171 AACAGGATCCAGAAGATGTCC 57.078 47.619 15.82 0.00 34.42 4.02
5091 5485 2.612672 GGCTCGCTAAATAACCTTCCAC 59.387 50.000 0.00 0.00 0.00 4.02
5157 5551 6.758254 ACAGCTGGCATTTAAGTTAAAACAT 58.242 32.000 19.93 0.00 0.00 2.71
5174 5568 2.477825 CTATCATCCACGAACAGCTGG 58.522 52.381 19.93 2.38 0.00 4.85
5204 5598 8.846943 ATAGCACATCCAATATAAAACGATCA 57.153 30.769 0.00 0.00 0.00 2.92
5293 5688 7.005062 AGCACACACAATATAAAACGATCTC 57.995 36.000 0.00 0.00 0.00 2.75
5294 5689 6.985188 AGCACACACAATATAAAACGATCT 57.015 33.333 0.00 0.00 0.00 2.75
5298 5693 7.635973 CACAGATAGCACACACAATATAAAACG 59.364 37.037 0.00 0.00 0.00 3.60
5301 5696 6.542005 CCCACAGATAGCACACACAATATAAA 59.458 38.462 0.00 0.00 0.00 1.40
5302 5697 6.054941 CCCACAGATAGCACACACAATATAA 58.945 40.000 0.00 0.00 0.00 0.98
5303 5698 5.365314 TCCCACAGATAGCACACACAATATA 59.635 40.000 0.00 0.00 0.00 0.86
5304 5699 4.164030 TCCCACAGATAGCACACACAATAT 59.836 41.667 0.00 0.00 0.00 1.28
5305 5700 3.517500 TCCCACAGATAGCACACACAATA 59.482 43.478 0.00 0.00 0.00 1.90
5306 5701 2.305635 TCCCACAGATAGCACACACAAT 59.694 45.455 0.00 0.00 0.00 2.71
5307 5702 1.696884 TCCCACAGATAGCACACACAA 59.303 47.619 0.00 0.00 0.00 3.33
5308 5703 1.347062 TCCCACAGATAGCACACACA 58.653 50.000 0.00 0.00 0.00 3.72
5309 5704 2.076863 GTTCCCACAGATAGCACACAC 58.923 52.381 0.00 0.00 0.00 3.82
5310 5705 1.003118 GGTTCCCACAGATAGCACACA 59.997 52.381 0.00 0.00 0.00 3.72
5311 5706 1.003118 TGGTTCCCACAGATAGCACAC 59.997 52.381 0.00 0.00 0.00 3.82
5312 5707 1.357137 TGGTTCCCACAGATAGCACA 58.643 50.000 0.00 0.00 0.00 4.57
5313 5708 2.717639 ATGGTTCCCACAGATAGCAC 57.282 50.000 0.00 0.00 35.80 4.40
5314 5709 3.010027 TCAAATGGTTCCCACAGATAGCA 59.990 43.478 0.00 0.00 35.80 3.49
5315 5710 3.620488 TCAAATGGTTCCCACAGATAGC 58.380 45.455 0.00 0.00 35.80 2.97
5316 5711 4.637534 CACTCAAATGGTTCCCACAGATAG 59.362 45.833 0.00 0.00 35.80 2.08
5317 5712 4.042809 ACACTCAAATGGTTCCCACAGATA 59.957 41.667 0.00 0.00 35.80 1.98
5318 5713 3.181429 ACACTCAAATGGTTCCCACAGAT 60.181 43.478 0.00 0.00 35.80 2.90
5319 5714 2.174639 ACACTCAAATGGTTCCCACAGA 59.825 45.455 0.00 0.00 35.80 3.41
5320 5715 2.586425 ACACTCAAATGGTTCCCACAG 58.414 47.619 0.00 0.00 35.80 3.66
5321 5716 2.746279 ACACTCAAATGGTTCCCACA 57.254 45.000 0.00 0.00 35.80 4.17
5322 5717 4.400529 AAAACACTCAAATGGTTCCCAC 57.599 40.909 0.00 0.00 35.80 4.61
5323 5718 5.659079 AGTTAAAACACTCAAATGGTTCCCA 59.341 36.000 0.00 0.00 38.19 4.37
5324 5719 6.156748 AGTTAAAACACTCAAATGGTTCCC 57.843 37.500 0.00 0.00 0.00 3.97
5325 5720 7.222031 GTCAAGTTAAAACACTCAAATGGTTCC 59.778 37.037 0.00 0.00 0.00 3.62
5326 5721 7.222031 GGTCAAGTTAAAACACTCAAATGGTTC 59.778 37.037 0.00 0.00 0.00 3.62
5327 5722 7.039270 GGTCAAGTTAAAACACTCAAATGGTT 58.961 34.615 0.00 0.00 0.00 3.67
5328 5723 6.153680 TGGTCAAGTTAAAACACTCAAATGGT 59.846 34.615 0.00 0.00 0.00 3.55
5329 5724 6.568869 TGGTCAAGTTAAAACACTCAAATGG 58.431 36.000 0.00 0.00 0.00 3.16
5330 5725 7.920151 TGATGGTCAAGTTAAAACACTCAAATG 59.080 33.333 0.00 0.00 0.00 2.32
5331 5726 8.006298 TGATGGTCAAGTTAAAACACTCAAAT 57.994 30.769 0.00 0.00 0.00 2.32
5332 5727 7.397892 TGATGGTCAAGTTAAAACACTCAAA 57.602 32.000 0.00 0.00 0.00 2.69
5333 5728 6.459573 GCTGATGGTCAAGTTAAAACACTCAA 60.460 38.462 0.00 0.00 0.00 3.02
5334 5729 5.008613 GCTGATGGTCAAGTTAAAACACTCA 59.991 40.000 0.00 0.00 0.00 3.41
5335 5730 5.239525 AGCTGATGGTCAAGTTAAAACACTC 59.760 40.000 0.00 0.00 0.00 3.51
5336 5731 5.009010 CAGCTGATGGTCAAGTTAAAACACT 59.991 40.000 8.42 0.00 0.00 3.55
5337 5732 5.215160 CAGCTGATGGTCAAGTTAAAACAC 58.785 41.667 8.42 0.00 0.00 3.32
5338 5733 4.887071 ACAGCTGATGGTCAAGTTAAAACA 59.113 37.500 23.35 0.00 0.00 2.83
5339 5734 5.438761 ACAGCTGATGGTCAAGTTAAAAC 57.561 39.130 23.35 0.00 0.00 2.43
5347 5742 1.955778 CCACAAACAGCTGATGGTCAA 59.044 47.619 23.35 0.00 0.00 3.18
5349 5744 1.896220 TCCACAAACAGCTGATGGTC 58.104 50.000 23.35 0.00 0.00 4.02
5351 5746 2.439409 TCATCCACAAACAGCTGATGG 58.561 47.619 23.35 20.41 34.87 3.51
5363 5758 4.138290 TCGCTAAAAACCTTTCATCCACA 58.862 39.130 0.00 0.00 0.00 4.17
5369 5764 5.427036 AAACGATCGCTAAAAACCTTTCA 57.573 34.783 16.60 0.00 0.00 2.69
5370 5765 9.712359 ATATAAAACGATCGCTAAAAACCTTTC 57.288 29.630 16.60 0.00 0.00 2.62
5372 5767 9.498307 CAATATAAAACGATCGCTAAAAACCTT 57.502 29.630 16.60 0.00 0.00 3.50
5373 5768 8.126700 CCAATATAAAACGATCGCTAAAAACCT 58.873 33.333 16.60 0.00 0.00 3.50
5374 5769 7.377662 CCCAATATAAAACGATCGCTAAAAACC 59.622 37.037 16.60 0.00 0.00 3.27
5375 5770 7.911727 ACCCAATATAAAACGATCGCTAAAAAC 59.088 33.333 16.60 0.00 0.00 2.43
5376 5771 7.911205 CACCCAATATAAAACGATCGCTAAAAA 59.089 33.333 16.60 0.00 0.00 1.94
5377 5772 7.066043 ACACCCAATATAAAACGATCGCTAAAA 59.934 33.333 16.60 0.00 0.00 1.52
5378 5773 6.539464 ACACCCAATATAAAACGATCGCTAAA 59.461 34.615 16.60 0.00 0.00 1.85
5379 5774 6.018588 CACACCCAATATAAAACGATCGCTAA 60.019 38.462 16.60 0.00 0.00 3.09
5380 5775 5.464057 CACACCCAATATAAAACGATCGCTA 59.536 40.000 16.60 4.78 0.00 4.26
5381 5776 4.272504 CACACCCAATATAAAACGATCGCT 59.727 41.667 16.60 0.00 0.00 4.93
5382 5777 4.523813 CACACCCAATATAAAACGATCGC 58.476 43.478 16.60 0.00 0.00 4.58
5383 5778 4.272504 AGCACACCCAATATAAAACGATCG 59.727 41.667 14.88 14.88 0.00 3.69
5384 5779 5.751243 AGCACACCCAATATAAAACGATC 57.249 39.130 0.00 0.00 0.00 3.69
5385 5780 7.173218 CAGATAGCACACCCAATATAAAACGAT 59.827 37.037 0.00 0.00 0.00 3.73
5386 5781 6.481976 CAGATAGCACACCCAATATAAAACGA 59.518 38.462 0.00 0.00 0.00 3.85
5387 5782 6.658831 CAGATAGCACACCCAATATAAAACG 58.341 40.000 0.00 0.00 0.00 3.60
5388 5783 6.438763 GCAGATAGCACACCCAATATAAAAC 58.561 40.000 0.00 0.00 44.79 2.43
5389 5784 6.633500 GCAGATAGCACACCCAATATAAAA 57.367 37.500 0.00 0.00 44.79 1.52
5404 5799 3.282021 TCAAATGGTTCCAGCAGATAGC 58.718 45.455 0.00 0.00 46.19 2.97
5405 5800 4.334759 CACTCAAATGGTTCCAGCAGATAG 59.665 45.833 0.00 0.00 0.00 2.08
5406 5801 4.264253 CACTCAAATGGTTCCAGCAGATA 58.736 43.478 0.00 0.00 0.00 1.98
5407 5802 3.087031 CACTCAAATGGTTCCAGCAGAT 58.913 45.455 0.00 0.00 0.00 2.90
5408 5803 2.507484 CACTCAAATGGTTCCAGCAGA 58.493 47.619 0.00 0.00 0.00 4.26
5409 5804 1.068055 GCACTCAAATGGTTCCAGCAG 60.068 52.381 0.00 0.00 0.00 4.24
5410 5805 0.961019 GCACTCAAATGGTTCCAGCA 59.039 50.000 0.00 0.00 0.00 4.41
5411 5806 1.251251 AGCACTCAAATGGTTCCAGC 58.749 50.000 0.00 0.00 0.00 4.85
5412 5807 5.010012 AGTTAAAGCACTCAAATGGTTCCAG 59.990 40.000 0.00 0.00 39.32 3.86
5429 5824 5.684550 AAAGGCAGACGGTTAAGTTAAAG 57.315 39.130 0.00 0.00 0.00 1.85
5445 5847 3.737559 ACCTATCATCCACAAAAGGCA 57.262 42.857 0.00 0.00 0.00 4.75
5448 5850 8.850156 CCCTAAATAACCTATCATCCACAAAAG 58.150 37.037 0.00 0.00 0.00 2.27
5449 5851 8.561769 TCCCTAAATAACCTATCATCCACAAAA 58.438 33.333 0.00 0.00 0.00 2.44
5507 5909 9.547753 CTAACTATAGGCATGAGAAAGCTTTTA 57.452 33.333 14.05 3.72 0.00 1.52
5519 5921 7.616150 AGGGAGTACATACTAACTATAGGCATG 59.384 40.741 4.43 2.86 36.50 4.06
5526 5928 8.162746 GGTACAGAGGGAGTACATACTAACTAT 58.837 40.741 0.00 0.00 42.73 2.12
5527 5929 7.127801 TGGTACAGAGGGAGTACATACTAACTA 59.872 40.741 0.00 0.00 42.73 2.24
5528 5930 6.069206 TGGTACAGAGGGAGTACATACTAACT 60.069 42.308 0.00 0.00 42.73 2.24
5529 5931 6.039159 GTGGTACAGAGGGAGTACATACTAAC 59.961 46.154 0.00 0.00 42.73 2.34
5530 5932 6.125029 GTGGTACAGAGGGAGTACATACTAA 58.875 44.000 0.00 0.00 42.73 2.24
5531 5933 5.192321 TGTGGTACAGAGGGAGTACATACTA 59.808 44.000 0.00 0.00 42.73 1.82
5532 5934 4.017775 TGTGGTACAGAGGGAGTACATACT 60.018 45.833 0.00 0.00 42.73 2.12
5533 5935 4.275810 TGTGGTACAGAGGGAGTACATAC 58.724 47.826 0.00 0.00 42.73 2.39
5534 5936 4.596354 TGTGGTACAGAGGGAGTACATA 57.404 45.455 0.00 0.00 42.73 2.29
5535 5937 3.468071 TGTGGTACAGAGGGAGTACAT 57.532 47.619 0.00 0.00 42.73 2.29
5536 5938 2.984435 TGTGGTACAGAGGGAGTACA 57.016 50.000 0.00 0.00 42.73 2.90
5537 5939 4.954826 AGTATTGTGGTACAGAGGGAGTAC 59.045 45.833 0.00 0.00 41.80 2.73
5538 5940 5.202746 AGTATTGTGGTACAGAGGGAGTA 57.797 43.478 0.00 0.00 41.80 2.59
5539 5941 4.062490 AGTATTGTGGTACAGAGGGAGT 57.938 45.455 0.00 0.00 41.80 3.85
5540 5942 4.759782 CAAGTATTGTGGTACAGAGGGAG 58.240 47.826 0.00 0.00 42.34 4.30
5541 5943 4.819105 CAAGTATTGTGGTACAGAGGGA 57.181 45.455 0.00 0.00 42.34 4.20
5554 5956 5.529581 AGTTTCCCCAACAACAAGTATTG 57.470 39.130 0.00 0.00 44.81 1.90
5555 5957 5.423931 ACAAGTTTCCCCAACAACAAGTATT 59.576 36.000 0.00 0.00 37.93 1.89
5556 5958 4.959839 ACAAGTTTCCCCAACAACAAGTAT 59.040 37.500 0.00 0.00 37.93 2.12
5557 5959 4.345854 ACAAGTTTCCCCAACAACAAGTA 58.654 39.130 0.00 0.00 37.93 2.24
5558 5960 3.169908 ACAAGTTTCCCCAACAACAAGT 58.830 40.909 0.00 0.00 37.93 3.16
5559 5961 3.885724 ACAAGTTTCCCCAACAACAAG 57.114 42.857 0.00 0.00 37.93 3.16
5560 5962 4.345854 AGTACAAGTTTCCCCAACAACAA 58.654 39.130 0.00 0.00 37.93 2.83
5561 5963 3.970842 AGTACAAGTTTCCCCAACAACA 58.029 40.909 0.00 0.00 37.93 3.33
5562 5964 5.128205 ACTAGTACAAGTTTCCCCAACAAC 58.872 41.667 0.00 0.00 37.93 3.32
5563 5965 5.376756 ACTAGTACAAGTTTCCCCAACAA 57.623 39.130 0.00 0.00 37.93 2.83
5564 5966 6.691255 ATACTAGTACAAGTTTCCCCAACA 57.309 37.500 4.31 0.00 37.93 3.33
5565 5967 6.596888 GGAATACTAGTACAAGTTTCCCCAAC 59.403 42.308 16.58 0.00 34.28 3.77
5566 5968 6.272792 TGGAATACTAGTACAAGTTTCCCCAA 59.727 38.462 21.49 7.70 36.67 4.12
5567 5969 5.786457 TGGAATACTAGTACAAGTTTCCCCA 59.214 40.000 21.49 8.69 36.67 4.96
5568 5970 6.303903 TGGAATACTAGTACAAGTTTCCCC 57.696 41.667 21.49 6.79 36.67 4.81
5569 5971 7.392418 AGTTGGAATACTAGTACAAGTTTCCC 58.608 38.462 21.49 12.06 36.67 3.97
5570 5972 9.363763 GTAGTTGGAATACTAGTACAAGTTTCC 57.636 37.037 19.11 19.11 37.28 3.13
5571 5973 9.918630 TGTAGTTGGAATACTAGTACAAGTTTC 57.081 33.333 14.05 9.82 31.56 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.