Multiple sequence alignment - TraesCS3B01G414900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G414900 chr3B 100.000 3972 0 0 1 3972 651499715 651503686 0.000000e+00 7336
1 TraesCS3B01G414900 chr3B 83.179 648 106 2 2199 2846 489350888 489351532 1.230000e-164 590
2 TraesCS3B01G414900 chr3B 84.136 353 53 3 1643 1993 651425989 651426340 4.920000e-89 339
3 TraesCS3B01G414900 chr3B 83.569 353 55 3 1643 1993 489350292 489350643 1.060000e-85 327
4 TraesCS3B01G414900 chr3B 83.945 218 33 2 1266 1482 651425518 651425734 1.450000e-49 207
5 TraesCS3B01G414900 chr3D 89.081 3242 158 94 1 3124 488905940 488902777 0.000000e+00 3845
6 TraesCS3B01G414900 chr3D 82.947 733 118 6 2177 2907 488950777 488950050 0.000000e+00 654
7 TraesCS3B01G414900 chr3D 82.692 468 63 10 3294 3753 488897847 488897390 2.220000e-107 399
8 TraesCS3B01G414900 chr3D 84.511 368 54 3 1646 2011 488951348 488950982 1.050000e-95 361
9 TraesCS3B01G414900 chr3D 84.615 221 32 2 1266 1485 488951820 488951601 6.680000e-53 219
10 TraesCS3B01G414900 chr3D 81.467 259 33 9 3179 3430 488897643 488897393 8.710000e-47 198
11 TraesCS3B01G414900 chr3A 90.312 2921 152 65 242 3114 632287267 632290104 0.000000e+00 3705
12 TraesCS3B01G414900 chr3A 82.361 737 124 5 2174 2909 632040545 632041276 1.560000e-178 636
13 TraesCS3B01G414900 chr3A 84.986 353 50 3 1643 1993 632039982 632040333 4.880000e-94 355
14 TraesCS3B01G414900 chr3A 87.940 199 13 3 13 201 632287067 632287264 1.440000e-54 224
15 TraesCS3B01G414900 chr3A 74.441 626 109 23 3279 3884 632290101 632290695 5.170000e-54 222
16 TraesCS3B01G414900 chr3A 84.862 218 31 2 1266 1482 632039497 632039713 6.680000e-53 219
17 TraesCS3B01G414900 chr3A 83.478 230 32 6 3182 3407 632290110 632290337 4.020000e-50 209
18 TraesCS3B01G414900 chr3A 84.211 114 17 1 3274 3387 632290501 632290613 4.200000e-20 110
19 TraesCS3B01G414900 chr4B 83.411 645 104 2 2199 2843 46933585 46934226 2.640000e-166 595
20 TraesCS3B01G414900 chr4B 83.003 353 57 3 1643 1993 46932989 46933340 2.300000e-82 316
21 TraesCS3B01G414900 chr2B 83.542 638 102 2 2209 2846 254626822 254626188 9.500000e-166 593
22 TraesCS3B01G414900 chr2B 84.000 350 53 3 1646 1993 254627425 254627077 2.290000e-87 333
23 TraesCS3B01G414900 chr7B 80.164 731 133 7 2178 2907 40276285 40275566 1.620000e-148 536
24 TraesCS3B01G414900 chr7B 83.923 311 47 3 1646 1954 40276847 40276538 1.080000e-75 294
25 TraesCS3B01G414900 chr7B 81.081 222 40 2 1266 1486 40277432 40277212 4.080000e-40 176
26 TraesCS3B01G414900 chr7D 79.835 729 142 4 2180 2907 89311634 89310910 9.780000e-146 527
27 TraesCS3B01G414900 chr7D 81.614 223 37 4 1266 1486 89312797 89312577 8.770000e-42 182


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G414900 chr3B 651499715 651503686 3971 False 7336.000000 7336 100.000000 1 3972 1 chr3B.!!$F1 3971
1 TraesCS3B01G414900 chr3B 489350292 489351532 1240 False 458.500000 590 83.374000 1643 2846 2 chr3B.!!$F2 1203
2 TraesCS3B01G414900 chr3B 651425518 651426340 822 False 273.000000 339 84.040500 1266 1993 2 chr3B.!!$F3 727
3 TraesCS3B01G414900 chr3D 488902777 488905940 3163 True 3845.000000 3845 89.081000 1 3124 1 chr3D.!!$R1 3123
4 TraesCS3B01G414900 chr3D 488950050 488951820 1770 True 411.333333 654 84.024333 1266 2907 3 chr3D.!!$R3 1641
5 TraesCS3B01G414900 chr3A 632287067 632290695 3628 False 894.000000 3705 84.076400 13 3884 5 chr3A.!!$F2 3871
6 TraesCS3B01G414900 chr3A 632039497 632041276 1779 False 403.333333 636 84.069667 1266 2909 3 chr3A.!!$F1 1643
7 TraesCS3B01G414900 chr4B 46932989 46934226 1237 False 455.500000 595 83.207000 1643 2843 2 chr4B.!!$F1 1200
8 TraesCS3B01G414900 chr2B 254626188 254627425 1237 True 463.000000 593 83.771000 1646 2846 2 chr2B.!!$R1 1200
9 TraesCS3B01G414900 chr7B 40275566 40277432 1866 True 335.333333 536 81.722667 1266 2907 3 chr7B.!!$R1 1641
10 TraesCS3B01G414900 chr7D 89310910 89312797 1887 True 354.500000 527 80.724500 1266 2907 2 chr7D.!!$R1 1641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
906 982 0.179127 CACTGTCCGCGATCAGATGT 60.179 55.0 27.49 11.07 35.84 3.06 F
1493 1618 0.963962 GTCGTGGTAAGTCAGTCCCA 59.036 55.0 0.00 0.00 0.00 4.37 F
1936 2303 0.250234 TCTTCCTCATTGGCACTCCG 59.750 55.0 0.00 0.00 35.26 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1732 2099 0.109226 CCTTCTCGTCGAACTGGTCC 60.109 60.0 0.00 0.0 0.00 4.46 R
2927 3415 0.179018 GCTCCCCTGTAATCGCCATT 60.179 55.0 0.00 0.0 0.00 3.16 R
3251 3754 0.534412 CAGAGTTCTCTGGGACGCAT 59.466 55.0 18.74 0.0 34.28 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 129 0.915364 ACCCAGGAAGGAAGATCAGC 59.085 55.000 0.00 0.00 41.22 4.26
138 145 2.703416 TCAGCTGATGTTGATCACCAC 58.297 47.619 13.74 0.00 34.71 4.16
213 224 0.252197 ACTAGGAACCGGGAATGTGC 59.748 55.000 6.32 0.00 0.00 4.57
216 227 1.602323 GGAACCGGGAATGTGCACA 60.602 57.895 24.08 24.08 0.00 4.57
218 229 0.451783 GAACCGGGAATGTGCACATC 59.548 55.000 31.45 22.71 35.10 3.06
245 275 0.539986 TGCCCTCTGTCCCGTATTTC 59.460 55.000 0.00 0.00 0.00 2.17
252 282 4.401519 CCTCTGTCCCGTATTTCTCACTAA 59.598 45.833 0.00 0.00 0.00 2.24
371 405 2.228822 GTGATCCGATTGCCAACAGTTT 59.771 45.455 0.00 0.00 0.00 2.66
372 406 2.228582 TGATCCGATTGCCAACAGTTTG 59.771 45.455 0.00 0.00 0.00 2.93
390 424 1.757682 TGTGTCCGTTGCTTTTCCTT 58.242 45.000 0.00 0.00 0.00 3.36
451 491 1.212616 GCAGCTGCTAGTTACCATCG 58.787 55.000 31.33 0.00 38.21 3.84
456 496 2.351726 GCTGCTAGTTACCATCGGTTTG 59.648 50.000 0.00 0.00 37.09 2.93
472 513 0.400975 TTTGGAATCGGGGAAACGGA 59.599 50.000 0.00 0.00 0.00 4.69
473 514 0.400975 TTGGAATCGGGGAAACGGAA 59.599 50.000 0.00 0.00 31.76 4.30
481 522 1.004679 GGGAAACGGAAGGTGCGTA 60.005 57.895 0.00 0.00 45.62 4.42
522 592 3.721868 CCCCTTTCGAGCTGGGTA 58.278 61.111 15.28 0.00 39.31 3.69
678 748 6.456501 AGGCAGGACATAAATTCGTACTATC 58.543 40.000 0.00 0.00 0.00 2.08
681 751 6.924060 GCAGGACATAAATTCGTACTATCACT 59.076 38.462 0.00 0.00 0.00 3.41
682 752 8.080417 GCAGGACATAAATTCGTACTATCACTA 58.920 37.037 0.00 0.00 0.00 2.74
683 753 9.395707 CAGGACATAAATTCGTACTATCACTAC 57.604 37.037 0.00 0.00 0.00 2.73
684 754 9.352191 AGGACATAAATTCGTACTATCACTACT 57.648 33.333 0.00 0.00 0.00 2.57
732 802 5.303078 TGAAATTTGAAGAACGGGGATGAAA 59.697 36.000 0.00 0.00 0.00 2.69
738 808 4.830046 TGAAGAACGGGGATGAAATTTGAA 59.170 37.500 0.00 0.00 0.00 2.69
740 810 5.391312 AGAACGGGGATGAAATTTGAAAG 57.609 39.130 0.00 0.00 0.00 2.62
744 814 4.777366 ACGGGGATGAAATTTGAAAGGAAT 59.223 37.500 0.00 0.00 0.00 3.01
746 816 5.430886 GGGGATGAAATTTGAAAGGAATGG 58.569 41.667 0.00 0.00 0.00 3.16
749 819 6.764560 GGGATGAAATTTGAAAGGAATGGATG 59.235 38.462 0.00 0.00 0.00 3.51
759 829 5.424895 TGAAAGGAATGGATGGTAATTTGGG 59.575 40.000 0.00 0.00 0.00 4.12
760 830 4.898014 AGGAATGGATGGTAATTTGGGA 57.102 40.909 0.00 0.00 0.00 4.37
761 831 4.808042 AGGAATGGATGGTAATTTGGGAG 58.192 43.478 0.00 0.00 0.00 4.30
762 832 3.321968 GGAATGGATGGTAATTTGGGAGC 59.678 47.826 0.00 0.00 0.00 4.70
763 833 3.979501 ATGGATGGTAATTTGGGAGCT 57.020 42.857 0.00 0.00 0.00 4.09
764 834 3.017048 TGGATGGTAATTTGGGAGCTG 57.983 47.619 0.00 0.00 0.00 4.24
765 835 2.310538 GGATGGTAATTTGGGAGCTGG 58.689 52.381 0.00 0.00 0.00 4.85
766 836 2.310538 GATGGTAATTTGGGAGCTGGG 58.689 52.381 0.00 0.00 0.00 4.45
767 837 1.377690 TGGTAATTTGGGAGCTGGGA 58.622 50.000 0.00 0.00 0.00 4.37
768 838 1.929494 TGGTAATTTGGGAGCTGGGAT 59.071 47.619 0.00 0.00 0.00 3.85
769 839 3.127250 TGGTAATTTGGGAGCTGGGATA 58.873 45.455 0.00 0.00 0.00 2.59
770 840 3.117663 TGGTAATTTGGGAGCTGGGATAC 60.118 47.826 0.00 0.00 0.00 2.24
771 841 3.117663 GGTAATTTGGGAGCTGGGATACA 60.118 47.826 0.00 0.00 39.74 2.29
778 848 1.134371 GGAGCTGGGATACACAGGAAC 60.134 57.143 0.00 0.00 35.97 3.62
812 882 6.671779 TCTGCCCTAAATTTGGACCAAATAAT 59.328 34.615 28.57 22.39 42.32 1.28
882 954 6.347969 CGGATCATAAATGCTGTTCATCGATT 60.348 38.462 0.00 0.00 33.40 3.34
892 964 1.812571 GTTCATCGATTTGGGCACTGT 59.187 47.619 0.00 0.00 0.00 3.55
893 965 1.737838 TCATCGATTTGGGCACTGTC 58.262 50.000 0.00 0.00 0.00 3.51
903 979 2.181777 GCACTGTCCGCGATCAGA 59.818 61.111 27.49 7.95 35.84 3.27
904 980 1.227089 GCACTGTCCGCGATCAGAT 60.227 57.895 27.49 14.56 35.84 2.90
906 982 0.179127 CACTGTCCGCGATCAGATGT 60.179 55.000 27.49 11.07 35.84 3.06
907 983 1.065551 CACTGTCCGCGATCAGATGTA 59.934 52.381 27.49 2.34 35.84 2.29
908 984 1.065701 ACTGTCCGCGATCAGATGTAC 59.934 52.381 27.49 6.56 35.84 2.90
909 985 1.335182 CTGTCCGCGATCAGATGTACT 59.665 52.381 20.13 0.00 34.02 2.73
982 1077 1.227556 AGCCTACATAAAGCGGCGG 60.228 57.895 9.78 0.00 46.85 6.13
993 1088 4.830765 GCGGCGGGCTGACATACA 62.831 66.667 9.78 0.00 39.11 2.29
1040 1141 1.071567 GTCTACGCACACTCGGAAGC 61.072 60.000 0.00 0.00 0.00 3.86
1041 1142 1.080772 CTACGCACACTCGGAAGCA 60.081 57.895 0.00 0.00 0.00 3.91
1131 1238 3.394836 GGCGGCTGGAAGTCCTCT 61.395 66.667 0.00 0.00 32.39 3.69
1177 1292 1.437986 GCGCCGATCTCCTGTACTT 59.562 57.895 0.00 0.00 0.00 2.24
1239 1359 3.250040 CCGGTAGGTCTGTTTGTTTCTTG 59.750 47.826 0.00 0.00 0.00 3.02
1240 1360 3.303791 CGGTAGGTCTGTTTGTTTCTTGC 60.304 47.826 0.00 0.00 0.00 4.01
1241 1361 3.004419 GGTAGGTCTGTTTGTTTCTTGCC 59.996 47.826 0.00 0.00 0.00 4.52
1242 1362 2.733956 AGGTCTGTTTGTTTCTTGCCA 58.266 42.857 0.00 0.00 0.00 4.92
1389 1514 4.070552 GCGTGGAAGGGCGTCTCT 62.071 66.667 0.00 0.00 0.00 3.10
1493 1618 0.963962 GTCGTGGTAAGTCAGTCCCA 59.036 55.000 0.00 0.00 0.00 4.37
1535 1793 2.225019 CACAAGAGTCCATGACAAGCAC 59.775 50.000 0.00 0.00 34.60 4.40
1566 1885 2.092753 TGGGATTGATCTCCAACTCTGC 60.093 50.000 3.60 0.00 37.63 4.26
1587 1906 2.328473 CTGACTCTTGCGTTCGATTCA 58.672 47.619 0.00 0.00 0.00 2.57
1798 2165 3.307762 GCTCCTTCTTCAACTGGTGGTAT 60.308 47.826 0.00 0.00 0.00 2.73
1936 2303 0.250234 TCTTCCTCATTGGCACTCCG 59.750 55.000 0.00 0.00 35.26 4.63
1956 2323 1.674962 GTCCTACCGCTACTACACCAG 59.325 57.143 0.00 0.00 0.00 4.00
2046 2419 1.365699 CACCGCACCAAGTATGTACC 58.634 55.000 0.00 0.00 0.00 3.34
2047 2420 0.978151 ACCGCACCAAGTATGTACCA 59.022 50.000 0.00 0.00 0.00 3.25
2048 2421 1.557832 ACCGCACCAAGTATGTACCAT 59.442 47.619 0.00 0.00 0.00 3.55
2049 2422 2.767394 ACCGCACCAAGTATGTACCATA 59.233 45.455 0.00 0.00 0.00 2.74
2054 2427 4.439057 CACCAAGTATGTACCATAGCGTT 58.561 43.478 0.00 0.00 0.00 4.84
2067 2440 3.565482 CCATAGCGTTCATGGTTATTGCT 59.435 43.478 0.00 0.00 38.53 3.91
2074 2450 5.501715 CGTTCATGGTTATTGCTCATGTAC 58.498 41.667 0.00 0.00 39.25 2.90
2091 2574 7.275560 GCTCATGTACGTATATATTGTGCATCA 59.724 37.037 14.45 5.93 36.92 3.07
2105 2593 0.710567 GCATCACTCTGACGTGAACG 59.289 55.000 11.90 0.40 46.00 3.95
2125 2613 2.591715 AGTGACCGTTGGTGCAGC 60.592 61.111 9.47 9.47 35.25 5.25
2148 2636 4.821589 GAGCGGCAAGGTCGAGGG 62.822 72.222 1.45 0.00 37.64 4.30
2164 2652 2.224066 CGAGGGCAATAAGAACTCCGAT 60.224 50.000 0.00 0.00 0.00 4.18
2167 2655 2.872858 GGGCAATAAGAACTCCGATGAC 59.127 50.000 0.00 0.00 0.00 3.06
2752 3240 1.519246 CAGCTTCCTCATCTCCGCA 59.481 57.895 0.00 0.00 0.00 5.69
2893 3381 2.546195 TCTTCTTCTCGCGAGCTTAC 57.454 50.000 30.97 0.00 0.00 2.34
2913 3401 2.095161 ACGTCTACAAGAAGAAGAGCGG 60.095 50.000 0.00 0.00 0.00 5.52
2916 3404 0.885879 TACAAGAAGAAGAGCGGCGA 59.114 50.000 12.98 0.00 0.00 5.54
2917 3405 0.389166 ACAAGAAGAAGAGCGGCGAG 60.389 55.000 12.98 0.00 0.00 5.03
2918 3406 1.080995 CAAGAAGAAGAGCGGCGAGG 61.081 60.000 12.98 0.00 0.00 4.63
2919 3407 2.202810 GAAGAAGAGCGGCGAGGG 60.203 66.667 12.98 0.00 0.00 4.30
2920 3408 4.459089 AAGAAGAGCGGCGAGGGC 62.459 66.667 12.98 0.00 38.90 5.19
2946 3434 0.179018 AATGGCGATTACAGGGGAGC 60.179 55.000 0.00 0.00 0.00 4.70
2975 3469 5.674569 GCTGATGCTACATTGGTGTAACTTG 60.675 44.000 0.00 0.00 40.16 3.16
3000 3494 8.184192 TGTTAATTCTGGTTAGTACTACTACGC 58.816 37.037 0.91 0.00 28.93 4.42
3001 3495 5.764487 ATTCTGGTTAGTACTACTACGCC 57.236 43.478 0.91 1.48 28.93 5.68
3002 3496 4.220693 TCTGGTTAGTACTACTACGCCA 57.779 45.455 0.91 13.87 35.19 5.69
3003 3497 4.194640 TCTGGTTAGTACTACTACGCCAG 58.805 47.826 24.31 24.31 45.56 4.85
3004 3498 4.194640 CTGGTTAGTACTACTACGCCAGA 58.805 47.826 25.16 7.48 46.25 3.86
3006 3500 3.563390 GGTTAGTACTACTACGCCAGAGG 59.437 52.174 0.91 0.00 28.93 3.69
3007 3501 4.195416 GTTAGTACTACTACGCCAGAGGT 58.805 47.826 0.91 0.00 28.93 3.85
3008 3502 2.641305 AGTACTACTACGCCAGAGGTG 58.359 52.381 0.00 0.00 39.41 4.00
3010 3504 2.795231 ACTACTACGCCAGAGGTGTA 57.205 50.000 8.94 8.94 45.32 2.90
3011 3505 3.077484 ACTACTACGCCAGAGGTGTAA 57.923 47.619 10.33 0.00 46.18 2.41
3012 3506 3.015327 ACTACTACGCCAGAGGTGTAAG 58.985 50.000 10.33 8.42 46.18 2.34
3013 3507 1.920610 ACTACGCCAGAGGTGTAAGT 58.079 50.000 10.33 8.00 46.18 2.24
3014 3508 3.077484 ACTACGCCAGAGGTGTAAGTA 57.923 47.619 10.33 0.00 46.18 2.24
3015 3509 3.424703 ACTACGCCAGAGGTGTAAGTAA 58.575 45.455 10.33 0.00 46.18 2.24
3016 3510 4.021916 ACTACGCCAGAGGTGTAAGTAAT 58.978 43.478 10.33 0.00 46.18 1.89
3017 3511 3.975168 ACGCCAGAGGTGTAAGTAATT 57.025 42.857 0.00 0.00 45.32 1.40
3018 3512 5.653769 ACTACGCCAGAGGTGTAAGTAATTA 59.346 40.000 10.33 0.00 46.18 1.40
3019 3513 4.752146 ACGCCAGAGGTGTAAGTAATTAC 58.248 43.478 7.57 7.57 45.32 1.89
3020 3514 4.465305 ACGCCAGAGGTGTAAGTAATTACT 59.535 41.667 12.50 12.50 45.32 2.24
3040 3535 7.956420 TTACTAAGTGCGAAATTTTCAGAGA 57.044 32.000 9.66 0.00 0.00 3.10
3041 3536 6.473397 ACTAAGTGCGAAATTTTCAGAGAG 57.527 37.500 9.66 1.83 0.00 3.20
3042 3537 5.992217 ACTAAGTGCGAAATTTTCAGAGAGT 59.008 36.000 9.66 2.36 0.00 3.24
3043 3538 4.999751 AGTGCGAAATTTTCAGAGAGTC 57.000 40.909 9.66 0.00 0.00 3.36
3044 3539 3.430218 AGTGCGAAATTTTCAGAGAGTCG 59.570 43.478 9.66 0.00 0.00 4.18
3046 3541 4.055360 TGCGAAATTTTCAGAGAGTCGAA 58.945 39.130 9.66 0.00 0.00 3.71
3047 3542 4.509970 TGCGAAATTTTCAGAGAGTCGAAA 59.490 37.500 9.66 0.00 0.00 3.46
3048 3543 5.007234 TGCGAAATTTTCAGAGAGTCGAAAA 59.993 36.000 9.66 6.82 43.23 2.29
3049 3544 5.907391 GCGAAATTTTCAGAGAGTCGAAAAA 59.093 36.000 9.66 3.94 42.58 1.94
3083 3582 8.492673 AATTTTCAGATTGTTATAGAGTGCGA 57.507 30.769 0.00 0.00 0.00 5.10
3110 3613 7.763985 GGTAGATTGTCATAAATTTTGGGGTTG 59.236 37.037 0.00 0.00 0.00 3.77
3124 3627 5.722021 TTGGGGTTGAAATTTTCTCTAGC 57.278 39.130 10.33 5.69 0.00 3.42
3125 3628 4.086457 TGGGGTTGAAATTTTCTCTAGCC 58.914 43.478 10.33 12.61 0.00 3.93
3126 3629 4.202673 TGGGGTTGAAATTTTCTCTAGCCT 60.203 41.667 18.27 0.00 0.00 4.58
3127 3630 4.158579 GGGGTTGAAATTTTCTCTAGCCTG 59.841 45.833 18.27 0.00 0.00 4.85
3128 3631 4.380973 GGGTTGAAATTTTCTCTAGCCTGC 60.381 45.833 10.33 0.00 0.00 4.85
3129 3632 4.380973 GGTTGAAATTTTCTCTAGCCTGCC 60.381 45.833 10.33 0.00 0.00 4.85
3130 3633 4.032960 TGAAATTTTCTCTAGCCTGCCA 57.967 40.909 10.33 0.00 0.00 4.92
3131 3634 4.406456 TGAAATTTTCTCTAGCCTGCCAA 58.594 39.130 10.33 0.00 0.00 4.52
3132 3635 5.018809 TGAAATTTTCTCTAGCCTGCCAAT 58.981 37.500 10.33 0.00 0.00 3.16
3133 3636 6.186957 TGAAATTTTCTCTAGCCTGCCAATA 58.813 36.000 10.33 0.00 0.00 1.90
3134 3637 6.835488 TGAAATTTTCTCTAGCCTGCCAATAT 59.165 34.615 10.33 0.00 0.00 1.28
3135 3638 7.342799 TGAAATTTTCTCTAGCCTGCCAATATT 59.657 33.333 10.33 0.00 0.00 1.28
3136 3639 7.666063 AATTTTCTCTAGCCTGCCAATATTT 57.334 32.000 0.00 0.00 0.00 1.40
3137 3640 6.455360 TTTTCTCTAGCCTGCCAATATTTG 57.545 37.500 0.00 0.00 0.00 2.32
3138 3641 4.778213 TCTCTAGCCTGCCAATATTTGT 57.222 40.909 0.00 0.00 0.00 2.83
3139 3642 4.454678 TCTCTAGCCTGCCAATATTTGTG 58.545 43.478 0.00 0.00 0.00 3.33
3140 3643 2.951642 TCTAGCCTGCCAATATTTGTGC 59.048 45.455 0.00 0.00 0.00 4.57
3141 3644 1.559368 AGCCTGCCAATATTTGTGCA 58.441 45.000 4.53 4.53 36.14 4.57
3142 3645 2.112998 AGCCTGCCAATATTTGTGCAT 58.887 42.857 0.00 0.00 36.65 3.96
3143 3646 2.101917 AGCCTGCCAATATTTGTGCATC 59.898 45.455 0.00 2.04 36.65 3.91
3144 3647 2.804212 GCCTGCCAATATTTGTGCATCC 60.804 50.000 0.00 0.00 36.65 3.51
3145 3648 2.431419 CCTGCCAATATTTGTGCATCCA 59.569 45.455 0.00 0.00 36.65 3.41
3146 3649 3.118702 CCTGCCAATATTTGTGCATCCAA 60.119 43.478 0.00 0.00 36.65 3.53
3147 3650 3.859443 TGCCAATATTTGTGCATCCAAC 58.141 40.909 0.00 0.00 33.81 3.77
3148 3651 3.514706 TGCCAATATTTGTGCATCCAACT 59.485 39.130 0.00 0.00 33.81 3.16
3149 3652 4.708909 TGCCAATATTTGTGCATCCAACTA 59.291 37.500 0.00 0.00 33.81 2.24
3150 3653 5.363292 TGCCAATATTTGTGCATCCAACTAT 59.637 36.000 0.00 0.00 33.81 2.12
3151 3654 5.922544 GCCAATATTTGTGCATCCAACTATC 59.077 40.000 0.00 0.00 0.00 2.08
3152 3655 6.449698 CCAATATTTGTGCATCCAACTATCC 58.550 40.000 0.00 0.00 0.00 2.59
3153 3656 6.040729 CCAATATTTGTGCATCCAACTATCCA 59.959 38.462 0.00 0.00 0.00 3.41
3154 3657 7.417683 CCAATATTTGTGCATCCAACTATCCAA 60.418 37.037 0.00 0.00 0.00 3.53
3155 3658 5.587388 ATTTGTGCATCCAACTATCCAAG 57.413 39.130 0.00 0.00 0.00 3.61
3156 3659 3.003394 TGTGCATCCAACTATCCAAGG 57.997 47.619 0.00 0.00 0.00 3.61
3157 3660 2.301346 GTGCATCCAACTATCCAAGGG 58.699 52.381 0.00 0.00 0.00 3.95
3158 3661 2.092429 GTGCATCCAACTATCCAAGGGA 60.092 50.000 0.00 0.00 35.55 4.20
3159 3662 2.580322 TGCATCCAACTATCCAAGGGAA 59.420 45.455 0.00 0.00 34.34 3.97
3160 3663 2.952310 GCATCCAACTATCCAAGGGAAC 59.048 50.000 0.00 0.00 34.34 3.62
3162 3665 4.455606 CATCCAACTATCCAAGGGAACTC 58.544 47.826 0.00 0.00 42.68 3.01
3163 3666 3.803340 TCCAACTATCCAAGGGAACTCT 58.197 45.455 0.00 0.00 42.68 3.24
3164 3667 3.519510 TCCAACTATCCAAGGGAACTCTG 59.480 47.826 0.00 0.00 42.68 3.35
3165 3668 3.519510 CCAACTATCCAAGGGAACTCTGA 59.480 47.826 0.00 0.00 42.68 3.27
3166 3669 4.019321 CCAACTATCCAAGGGAACTCTGAA 60.019 45.833 0.00 0.00 42.68 3.02
3167 3670 5.339530 CCAACTATCCAAGGGAACTCTGAAT 60.340 44.000 0.00 0.00 42.68 2.57
3168 3671 6.183347 CAACTATCCAAGGGAACTCTGAATT 58.817 40.000 0.00 0.00 42.68 2.17
3169 3672 6.394345 ACTATCCAAGGGAACTCTGAATTT 57.606 37.500 0.00 0.00 42.68 1.82
3170 3673 6.418946 ACTATCCAAGGGAACTCTGAATTTC 58.581 40.000 0.00 0.00 42.68 2.17
3171 3674 4.722526 TCCAAGGGAACTCTGAATTTCA 57.277 40.909 0.00 0.00 42.68 2.69
3172 3675 4.398319 TCCAAGGGAACTCTGAATTTCAC 58.602 43.478 0.00 0.00 42.68 3.18
3173 3676 4.104738 TCCAAGGGAACTCTGAATTTCACT 59.895 41.667 0.00 0.00 42.68 3.41
3174 3677 5.309543 TCCAAGGGAACTCTGAATTTCACTA 59.690 40.000 4.37 0.00 42.68 2.74
3175 3678 5.645497 CCAAGGGAACTCTGAATTTCACTAG 59.355 44.000 4.37 0.00 42.68 2.57
3176 3679 6.467677 CAAGGGAACTCTGAATTTCACTAGA 58.532 40.000 0.00 0.42 42.68 2.43
3177 3680 6.293004 AGGGAACTCTGAATTTCACTAGAG 57.707 41.667 10.85 10.85 41.78 2.43
3178 3681 6.019748 AGGGAACTCTGAATTTCACTAGAGA 58.980 40.000 16.67 0.00 39.13 3.10
3179 3682 6.498651 AGGGAACTCTGAATTTCACTAGAGAA 59.501 38.462 16.67 0.00 39.13 2.87
3180 3683 7.016661 AGGGAACTCTGAATTTCACTAGAGAAA 59.983 37.037 16.22 16.22 39.13 2.52
3185 3688 7.596995 ACTCTGAATTTCACTAGAGAAAACTCG 59.403 37.037 17.53 12.87 40.54 4.18
3189 3692 8.765219 TGAATTTCACTAGAGAAAACTCGAAAG 58.235 33.333 17.53 0.00 40.54 2.62
3204 3707 8.637196 AAACTCGAAAGGGATCTTTTCTTAAT 57.363 30.769 16.01 3.84 42.72 1.40
3240 3743 5.819825 ATCATTCGACTTTTCTTTAGCCC 57.180 39.130 0.00 0.00 0.00 5.19
3241 3744 4.906618 TCATTCGACTTTTCTTTAGCCCT 58.093 39.130 0.00 0.00 0.00 5.19
3243 3746 6.469410 TCATTCGACTTTTCTTTAGCCCTAA 58.531 36.000 0.00 0.00 0.00 2.69
3244 3747 6.370718 TCATTCGACTTTTCTTTAGCCCTAAC 59.629 38.462 0.00 0.00 0.00 2.34
3245 3748 5.217978 TCGACTTTTCTTTAGCCCTAACA 57.782 39.130 0.00 0.00 0.00 2.41
3246 3749 5.613329 TCGACTTTTCTTTAGCCCTAACAA 58.387 37.500 0.00 0.00 0.00 2.83
3247 3750 6.235664 TCGACTTTTCTTTAGCCCTAACAAT 58.764 36.000 0.00 0.00 0.00 2.71
3248 3751 7.388437 TCGACTTTTCTTTAGCCCTAACAATA 58.612 34.615 0.00 0.00 0.00 1.90
3250 3753 8.674607 CGACTTTTCTTTAGCCCTAACAATATT 58.325 33.333 0.00 0.00 0.00 1.28
3255 3758 7.667043 TCTTTAGCCCTAACAATATTATGCG 57.333 36.000 0.00 0.00 0.00 4.73
3256 3759 7.221450 TCTTTAGCCCTAACAATATTATGCGT 58.779 34.615 0.00 0.00 0.00 5.24
3319 3823 5.416013 GGGATCTTTTCTTAACTGAACCTGG 59.584 44.000 0.00 0.00 0.00 4.45
3325 3829 6.877611 TTTCTTAACTGAACCTGGATGAAC 57.122 37.500 0.00 0.00 0.00 3.18
3328 3832 2.568623 ACTGAACCTGGATGAACCAC 57.431 50.000 0.00 0.00 44.64 4.16
3333 3837 0.608640 ACCTGGATGAACCACTCGAC 59.391 55.000 0.00 0.00 44.64 4.20
3334 3838 0.458543 CCTGGATGAACCACTCGACG 60.459 60.000 0.00 0.00 44.64 5.12
3340 3844 2.589798 TGAACCACTCGACGTTTCTT 57.410 45.000 0.00 0.00 0.00 2.52
3342 3846 2.605818 TGAACCACTCGACGTTTCTTTG 59.394 45.455 0.00 0.00 0.00 2.77
3343 3847 2.304751 ACCACTCGACGTTTCTTTGT 57.695 45.000 0.00 0.00 0.00 2.83
3354 3859 6.422701 TCGACGTTTCTTTGTCTGACAATATT 59.577 34.615 22.60 4.87 38.00 1.28
3355 3860 7.595875 TCGACGTTTCTTTGTCTGACAATATTA 59.404 33.333 22.60 8.10 38.00 0.98
3356 3861 8.380644 CGACGTTTCTTTGTCTGACAATATTAT 58.619 33.333 22.60 6.94 38.00 1.28
3371 3876 7.994911 TGACAATATTATGCATCCAAGAGAACT 59.005 33.333 0.19 0.00 0.00 3.01
3373 3878 8.216423 ACAATATTATGCATCCAAGAGAACTCT 58.784 33.333 0.19 0.00 42.75 3.24
3379 3884 4.019950 TGCATCCAAGAGAACTCTGAATCA 60.020 41.667 5.06 0.64 40.36 2.57
3381 3886 5.485620 CATCCAAGAGAACTCTGAATCACA 58.514 41.667 5.06 0.00 40.36 3.58
3386 3893 8.156820 TCCAAGAGAACTCTGAATCACATAAAA 58.843 33.333 5.06 0.00 40.36 1.52
3387 3894 8.954350 CCAAGAGAACTCTGAATCACATAAAAT 58.046 33.333 5.06 0.00 40.36 1.82
3427 4035 8.017373 TCTTTTCTTAAGCGAACATGAATGAAG 58.983 33.333 0.00 0.00 0.00 3.02
3453 4061 7.148474 GCATTCGTCCTTTATTTAGTCTGACAA 60.148 37.037 10.88 0.00 0.00 3.18
3454 4062 8.883731 CATTCGTCCTTTATTTAGTCTGACAAT 58.116 33.333 10.88 4.72 0.00 2.71
3456 4064 9.932207 TTCGTCCTTTATTTAGTCTGACAATAA 57.068 29.630 10.88 9.40 0.00 1.40
3470 4078 9.236006 AGTCTGACAATAAATATTATGCATCCC 57.764 33.333 0.19 0.00 0.00 3.85
3472 4080 9.585369 TCTGACAATAAATATTATGCATCCCAA 57.415 29.630 0.19 0.00 0.00 4.12
3482 4090 9.812347 AATATTATGCATCCCAAAGAACTATGA 57.188 29.630 0.19 0.00 0.00 2.15
3483 4091 9.812347 ATATTATGCATCCCAAAGAACTATGAA 57.188 29.630 0.19 0.00 0.00 2.57
3484 4092 8.716674 ATTATGCATCCCAAAGAACTATGAAT 57.283 30.769 0.19 0.00 0.00 2.57
3485 4093 9.812347 ATTATGCATCCCAAAGAACTATGAATA 57.188 29.630 0.19 0.00 0.00 1.75
3545 4153 4.598036 ACTGAACCTGGATGGATCATTT 57.402 40.909 0.00 0.00 44.89 2.32
3548 4156 5.133383 TGAACCTGGATGGATCATTTGAT 57.867 39.130 0.00 0.00 41.81 2.57
3551 4159 6.944290 TGAACCTGGATGGATCATTTGATATC 59.056 38.462 0.00 0.00 41.81 1.63
3552 4160 6.458630 ACCTGGATGGATCATTTGATATCA 57.541 37.500 0.00 0.00 39.71 2.15
3553 4161 7.040913 ACCTGGATGGATCATTTGATATCAT 57.959 36.000 6.17 7.95 39.71 2.45
3555 4163 8.617491 ACCTGGATGGATCATTTGATATCATTA 58.383 33.333 6.17 0.00 39.71 1.90
3578 4186 3.262915 AGCCTGATAATAGAGTGCATCCC 59.737 47.826 0.00 0.00 0.00 3.85
3586 4194 1.949799 AGAGTGCATCCCAGAGAACT 58.050 50.000 0.00 0.00 0.00 3.01
3644 4252 6.452494 TTTTTAACCGAACAGAATGAACCA 57.548 33.333 0.00 0.00 39.69 3.67
3645 4253 6.452494 TTTTAACCGAACAGAATGAACCAA 57.548 33.333 0.00 0.00 39.69 3.67
3646 4254 6.642707 TTTAACCGAACAGAATGAACCAAT 57.357 33.333 0.00 0.00 39.69 3.16
3647 4255 4.766404 AACCGAACAGAATGAACCAATC 57.234 40.909 0.00 0.00 39.69 2.67
3648 4256 3.750371 ACCGAACAGAATGAACCAATCA 58.250 40.909 0.00 0.00 43.67 2.57
3663 4271 9.927081 ATGAACCAATCATCCTTTATTTAGTCT 57.073 29.630 0.00 0.00 45.91 3.24
3664 4272 9.177608 TGAACCAATCATCCTTTATTTAGTCTG 57.822 33.333 0.00 0.00 31.50 3.51
3665 4273 9.396022 GAACCAATCATCCTTTATTTAGTCTGA 57.604 33.333 0.00 0.00 0.00 3.27
3666 4274 8.738645 ACCAATCATCCTTTATTTAGTCTGAC 57.261 34.615 0.00 0.00 0.00 3.51
3667 4275 8.328758 ACCAATCATCCTTTATTTAGTCTGACA 58.671 33.333 10.88 0.00 0.00 3.58
3668 4276 9.177608 CCAATCATCCTTTATTTAGTCTGACAA 57.822 33.333 10.88 0.00 0.00 3.18
3681 4289 8.621532 TTTAGTCTGACAATATTATGCATCCC 57.378 34.615 0.19 0.00 0.00 3.85
3682 4290 6.191657 AGTCTGACAATATTATGCATCCCA 57.808 37.500 0.19 0.00 0.00 4.37
3683 4291 6.604171 AGTCTGACAATATTATGCATCCCAA 58.396 36.000 0.19 0.00 0.00 4.12
3684 4292 7.062322 AGTCTGACAATATTATGCATCCCAAA 58.938 34.615 0.19 0.00 0.00 3.28
3685 4293 7.230108 AGTCTGACAATATTATGCATCCCAAAG 59.770 37.037 0.19 0.00 0.00 2.77
3686 4294 7.229306 GTCTGACAATATTATGCATCCCAAAGA 59.771 37.037 0.19 0.00 0.00 2.52
3687 4295 7.779326 TCTGACAATATTATGCATCCCAAAGAA 59.221 33.333 0.19 0.00 0.00 2.52
3688 4296 7.715657 TGACAATATTATGCATCCCAAAGAAC 58.284 34.615 0.19 0.00 0.00 3.01
3689 4297 7.560991 TGACAATATTATGCATCCCAAAGAACT 59.439 33.333 0.19 0.00 0.00 3.01
3690 4298 7.945134 ACAATATTATGCATCCCAAAGAACTC 58.055 34.615 0.19 0.00 0.00 3.01
3691 4299 7.781693 ACAATATTATGCATCCCAAAGAACTCT 59.218 33.333 0.19 0.00 0.00 3.24
3692 4300 7.756395 ATATTATGCATCCCAAAGAACTCTG 57.244 36.000 0.19 0.00 0.00 3.35
3693 4301 3.726557 ATGCATCCCAAAGAACTCTGA 57.273 42.857 0.00 0.00 0.00 3.27
3694 4302 3.507162 TGCATCCCAAAGAACTCTGAA 57.493 42.857 0.00 0.00 0.00 3.02
3695 4303 4.038271 TGCATCCCAAAGAACTCTGAAT 57.962 40.909 0.00 0.00 0.00 2.57
3696 4304 4.012374 TGCATCCCAAAGAACTCTGAATC 58.988 43.478 0.00 0.00 0.00 2.52
3697 4305 4.263639 TGCATCCCAAAGAACTCTGAATCT 60.264 41.667 0.00 0.00 0.00 2.40
3698 4306 4.335037 GCATCCCAAAGAACTCTGAATCTC 59.665 45.833 0.00 0.00 0.00 2.75
3699 4307 5.494724 CATCCCAAAGAACTCTGAATCTCA 58.505 41.667 0.00 0.00 0.00 3.27
3700 4308 5.768980 TCCCAAAGAACTCTGAATCTCAT 57.231 39.130 0.00 0.00 0.00 2.90
3701 4309 6.131972 TCCCAAAGAACTCTGAATCTCATT 57.868 37.500 0.00 0.00 0.00 2.57
3702 4310 7.257790 TCCCAAAGAACTCTGAATCTCATTA 57.742 36.000 0.00 0.00 0.00 1.90
3703 4311 7.689299 TCCCAAAGAACTCTGAATCTCATTAA 58.311 34.615 0.00 0.00 0.00 1.40
3704 4312 8.163408 TCCCAAAGAACTCTGAATCTCATTAAA 58.837 33.333 0.00 0.00 0.00 1.52
3705 4313 8.796475 CCCAAAGAACTCTGAATCTCATTAAAA 58.204 33.333 0.00 0.00 0.00 1.52
3727 4335 5.353394 AAAAACTTGGAAGGGGTCTTTTC 57.647 39.130 0.00 0.00 32.52 2.29
3728 4336 3.973472 AACTTGGAAGGGGTCTTTTCT 57.027 42.857 0.00 0.00 32.52 2.52
3729 4337 3.973472 ACTTGGAAGGGGTCTTTTCTT 57.027 42.857 0.00 0.00 32.52 2.52
3730 4338 5.397553 AACTTGGAAGGGGTCTTTTCTTA 57.602 39.130 0.00 0.00 32.52 2.10
3731 4339 5.397553 ACTTGGAAGGGGTCTTTTCTTAA 57.602 39.130 0.00 0.00 32.52 1.85
3732 4340 5.138276 ACTTGGAAGGGGTCTTTTCTTAAC 58.862 41.667 0.00 0.00 32.52 2.01
3733 4341 5.103643 ACTTGGAAGGGGTCTTTTCTTAACT 60.104 40.000 0.00 0.00 32.52 2.24
3734 4342 4.725490 TGGAAGGGGTCTTTTCTTAACTG 58.275 43.478 0.00 0.00 32.52 3.16
3735 4343 4.414182 TGGAAGGGGTCTTTTCTTAACTGA 59.586 41.667 0.00 0.00 32.52 3.41
3736 4344 5.103855 TGGAAGGGGTCTTTTCTTAACTGAA 60.104 40.000 0.00 0.00 32.52 3.02
3737 4345 5.241064 GGAAGGGGTCTTTTCTTAACTGAAC 59.759 44.000 0.00 0.00 32.52 3.18
3738 4346 4.726583 AGGGGTCTTTTCTTAACTGAACC 58.273 43.478 0.00 0.00 34.02 3.62
3739 4347 3.825014 GGGGTCTTTTCTTAACTGAACCC 59.175 47.826 0.00 0.00 45.89 4.11
3740 4348 3.501062 GGGTCTTTTCTTAACTGAACCCG 59.499 47.826 0.00 0.00 0.00 5.28
3741 4349 4.383173 GGTCTTTTCTTAACTGAACCCGA 58.617 43.478 0.00 0.00 0.00 5.14
3742 4350 4.818005 GGTCTTTTCTTAACTGAACCCGAA 59.182 41.667 0.00 0.00 0.00 4.30
3743 4351 5.472478 GGTCTTTTCTTAACTGAACCCGAAT 59.528 40.000 0.00 0.00 0.00 3.34
3744 4352 6.371389 GTCTTTTCTTAACTGAACCCGAATG 58.629 40.000 0.00 0.00 0.00 2.67
3745 4353 6.204108 GTCTTTTCTTAACTGAACCCGAATGA 59.796 38.462 0.00 0.00 0.00 2.57
3746 4354 6.768861 TCTTTTCTTAACTGAACCCGAATGAA 59.231 34.615 0.00 0.00 0.00 2.57
3747 4355 6.554334 TTTCTTAACTGAACCCGAATGAAG 57.446 37.500 0.00 0.00 0.00 3.02
3748 4356 4.000988 TCTTAACTGAACCCGAATGAAGC 58.999 43.478 0.00 0.00 0.00 3.86
3749 4357 2.270352 AACTGAACCCGAATGAAGCA 57.730 45.000 0.00 0.00 0.00 3.91
3750 4358 2.496899 ACTGAACCCGAATGAAGCAT 57.503 45.000 0.00 0.00 0.00 3.79
3751 4359 2.359900 ACTGAACCCGAATGAAGCATC 58.640 47.619 0.00 0.00 0.00 3.91
3752 4360 1.672881 CTGAACCCGAATGAAGCATCC 59.327 52.381 0.00 0.00 0.00 3.51
3753 4361 1.004161 TGAACCCGAATGAAGCATCCA 59.996 47.619 0.00 0.00 0.00 3.41
3754 4362 2.091541 GAACCCGAATGAAGCATCCAA 58.908 47.619 0.00 0.00 0.00 3.53
3755 4363 1.463674 ACCCGAATGAAGCATCCAAC 58.536 50.000 0.00 0.00 0.00 3.77
3756 4364 1.004745 ACCCGAATGAAGCATCCAACT 59.995 47.619 0.00 0.00 0.00 3.16
3757 4365 2.094675 CCCGAATGAAGCATCCAACTT 58.905 47.619 0.00 0.00 0.00 2.66
3758 4366 2.493278 CCCGAATGAAGCATCCAACTTT 59.507 45.455 0.00 0.00 0.00 2.66
3759 4367 3.056607 CCCGAATGAAGCATCCAACTTTT 60.057 43.478 0.00 0.00 0.00 2.27
3760 4368 4.559153 CCGAATGAAGCATCCAACTTTTT 58.441 39.130 0.00 0.00 0.00 1.94
3761 4369 5.336372 CCCGAATGAAGCATCCAACTTTTTA 60.336 40.000 0.00 0.00 0.00 1.52
3762 4370 6.155827 CCGAATGAAGCATCCAACTTTTTAA 58.844 36.000 0.00 0.00 0.00 1.52
3763 4371 6.089417 CCGAATGAAGCATCCAACTTTTTAAC 59.911 38.462 0.00 0.00 0.00 2.01
3764 4372 6.089417 CGAATGAAGCATCCAACTTTTTAACC 59.911 38.462 0.00 0.00 0.00 2.85
3765 4373 6.670695 ATGAAGCATCCAACTTTTTAACCT 57.329 33.333 0.00 0.00 0.00 3.50
3766 4374 5.841810 TGAAGCATCCAACTTTTTAACCTG 58.158 37.500 0.00 0.00 0.00 4.00
3767 4375 5.596361 TGAAGCATCCAACTTTTTAACCTGA 59.404 36.000 0.00 0.00 0.00 3.86
3768 4376 5.453567 AGCATCCAACTTTTTAACCTGAC 57.546 39.130 0.00 0.00 0.00 3.51
3769 4377 4.892934 AGCATCCAACTTTTTAACCTGACA 59.107 37.500 0.00 0.00 0.00 3.58
3770 4378 5.362430 AGCATCCAACTTTTTAACCTGACAA 59.638 36.000 0.00 0.00 0.00 3.18
3771 4379 6.041979 AGCATCCAACTTTTTAACCTGACAAT 59.958 34.615 0.00 0.00 0.00 2.71
3772 4380 7.232534 AGCATCCAACTTTTTAACCTGACAATA 59.767 33.333 0.00 0.00 0.00 1.90
3773 4381 8.034804 GCATCCAACTTTTTAACCTGACAATAT 58.965 33.333 0.00 0.00 0.00 1.28
3776 4384 9.802039 TCCAACTTTTTAACCTGACAATATAGT 57.198 29.630 0.00 0.00 0.00 2.12
3777 4385 9.840427 CCAACTTTTTAACCTGACAATATAGTG 57.160 33.333 0.00 0.00 0.00 2.74
3778 4386 9.341899 CAACTTTTTAACCTGACAATATAGTGC 57.658 33.333 0.00 0.00 0.00 4.40
3779 4387 8.630054 ACTTTTTAACCTGACAATATAGTGCA 57.370 30.769 0.00 0.00 0.00 4.57
3780 4388 9.243105 ACTTTTTAACCTGACAATATAGTGCAT 57.757 29.630 0.00 0.00 0.00 3.96
3783 4391 8.800370 TTTAACCTGACAATATAGTGCATTCA 57.200 30.769 0.00 0.00 0.00 2.57
3784 4392 8.800370 TTAACCTGACAATATAGTGCATTCAA 57.200 30.769 0.00 0.00 0.00 2.69
3785 4393 6.932356 ACCTGACAATATAGTGCATTCAAG 57.068 37.500 0.00 0.00 0.00 3.02
3786 4394 6.653020 ACCTGACAATATAGTGCATTCAAGA 58.347 36.000 0.00 0.00 0.00 3.02
3787 4395 6.765036 ACCTGACAATATAGTGCATTCAAGAG 59.235 38.462 0.00 0.00 0.00 2.85
3788 4396 6.988580 CCTGACAATATAGTGCATTCAAGAGA 59.011 38.462 0.00 0.00 0.00 3.10
3789 4397 7.496920 CCTGACAATATAGTGCATTCAAGAGAA 59.503 37.037 0.00 0.00 38.31 2.87
3790 4398 8.201554 TGACAATATAGTGCATTCAAGAGAAC 57.798 34.615 0.00 0.00 36.39 3.01
3791 4399 7.823799 TGACAATATAGTGCATTCAAGAGAACA 59.176 33.333 0.00 0.00 36.39 3.18
3792 4400 7.978982 ACAATATAGTGCATTCAAGAGAACAC 58.021 34.615 0.00 0.00 36.39 3.32
3793 4401 7.826252 ACAATATAGTGCATTCAAGAGAACACT 59.174 33.333 0.00 0.00 41.34 3.55
3794 4402 7.783090 ATATAGTGCATTCAAGAGAACACTG 57.217 36.000 10.10 0.00 39.78 3.66
3795 4403 4.077300 AGTGCATTCAAGAGAACACTGA 57.923 40.909 0.00 0.00 38.74 3.41
3796 4404 4.454678 AGTGCATTCAAGAGAACACTGAA 58.545 39.130 0.00 0.00 38.74 3.02
3797 4405 5.068636 AGTGCATTCAAGAGAACACTGAAT 58.931 37.500 0.00 0.00 38.74 2.57
3798 4406 5.180868 AGTGCATTCAAGAGAACACTGAATC 59.819 40.000 0.00 0.00 38.74 2.52
3799 4407 5.180868 GTGCATTCAAGAGAACACTGAATCT 59.819 40.000 0.00 0.00 36.39 2.40
3800 4408 5.410746 TGCATTCAAGAGAACACTGAATCTC 59.589 40.000 7.93 7.93 41.92 2.75
3801 4409 5.445673 GCATTCAAGAGAACACTGAATCTCG 60.446 44.000 9.48 0.00 45.34 4.04
3802 4410 4.855715 TCAAGAGAACACTGAATCTCGT 57.144 40.909 9.48 5.58 45.34 4.18
3807 4415 7.872993 TCAAGAGAACACTGAATCTCGTAAAAT 59.127 33.333 9.48 0.00 45.34 1.82
3814 4422 8.690680 ACACTGAATCTCGTAAAATAACTCTC 57.309 34.615 0.00 0.00 0.00 3.20
3819 4427 8.528643 TGAATCTCGTAAAATAACTCTCAAGGA 58.471 33.333 0.00 0.00 0.00 3.36
3880 4488 7.747155 TTAAAACGTCATTGAACTTCCCATA 57.253 32.000 0.00 0.00 0.00 2.74
3884 4492 4.080582 ACGTCATTGAACTTCCCATATGGA 60.081 41.667 24.00 6.56 43.18 3.41
3885 4493 5.065914 CGTCATTGAACTTCCCATATGGAT 58.934 41.667 24.00 2.82 44.66 3.41
3886 4494 6.183361 ACGTCATTGAACTTCCCATATGGATA 60.183 38.462 24.00 8.00 44.66 2.59
3887 4495 6.881065 CGTCATTGAACTTCCCATATGGATAT 59.119 38.462 24.00 4.34 44.66 1.63
3888 4496 7.148356 CGTCATTGAACTTCCCATATGGATATG 60.148 40.741 24.00 14.23 44.66 1.78
3901 4509 7.578310 CATATGGATATGGGCATAAGAAAGG 57.422 40.000 0.00 0.00 37.16 3.11
3902 4510 5.605540 ATGGATATGGGCATAAGAAAGGT 57.394 39.130 0.00 0.00 0.00 3.50
3903 4511 4.728772 TGGATATGGGCATAAGAAAGGTG 58.271 43.478 0.00 0.00 0.00 4.00
3904 4512 4.167892 TGGATATGGGCATAAGAAAGGTGT 59.832 41.667 0.00 0.00 0.00 4.16
3905 4513 5.371176 TGGATATGGGCATAAGAAAGGTGTA 59.629 40.000 0.00 0.00 0.00 2.90
3906 4514 6.045459 TGGATATGGGCATAAGAAAGGTGTAT 59.955 38.462 0.00 0.00 0.00 2.29
3907 4515 7.238723 TGGATATGGGCATAAGAAAGGTGTATA 59.761 37.037 0.00 0.00 0.00 1.47
3908 4516 8.107095 GGATATGGGCATAAGAAAGGTGTATAA 58.893 37.037 0.00 0.00 0.00 0.98
3909 4517 9.515226 GATATGGGCATAAGAAAGGTGTATAAA 57.485 33.333 0.00 0.00 0.00 1.40
3911 4519 8.782137 ATGGGCATAAGAAAGGTGTATAAATT 57.218 30.769 0.00 0.00 0.00 1.82
3912 4520 8.602472 TGGGCATAAGAAAGGTGTATAAATTT 57.398 30.769 0.00 0.00 0.00 1.82
3913 4521 9.041354 TGGGCATAAGAAAGGTGTATAAATTTT 57.959 29.630 0.00 0.00 0.00 1.82
3914 4522 9.313118 GGGCATAAGAAAGGTGTATAAATTTTG 57.687 33.333 0.00 0.00 0.00 2.44
3915 4523 9.869757 GGCATAAGAAAGGTGTATAAATTTTGT 57.130 29.630 0.00 0.00 0.00 2.83
3964 4572 9.599322 GTGAAGTCAGATAGTACAATTTTTGTG 57.401 33.333 3.22 0.00 45.03 3.33
3965 4573 9.337396 TGAAGTCAGATAGTACAATTTTTGTGT 57.663 29.630 3.22 0.00 45.03 3.72
3966 4574 9.599322 GAAGTCAGATAGTACAATTTTTGTGTG 57.401 33.333 3.22 0.00 45.03 3.82
3967 4575 8.902540 AGTCAGATAGTACAATTTTTGTGTGA 57.097 30.769 3.22 0.00 45.03 3.58
3968 4576 9.337396 AGTCAGATAGTACAATTTTTGTGTGAA 57.663 29.630 3.22 0.00 45.03 3.18
3969 4577 9.599322 GTCAGATAGTACAATTTTTGTGTGAAG 57.401 33.333 3.22 0.00 45.03 3.02
3970 4578 9.337396 TCAGATAGTACAATTTTTGTGTGAAGT 57.663 29.630 3.22 0.00 45.03 3.01
3971 4579 9.599322 CAGATAGTACAATTTTTGTGTGAAGTC 57.401 33.333 3.22 0.00 45.03 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 0.173481 CGCAACTGGCTAGTAGCTCA 59.827 55.000 21.20 15.65 41.99 4.26
122 129 2.926200 GAGTCGTGGTGATCAACATCAG 59.074 50.000 18.16 11.72 40.55 2.90
150 161 1.190323 GAATATCGGAGACTTTGCGCG 59.810 52.381 0.00 0.00 42.51 6.86
154 165 7.606349 TCCATATGAGAATATCGGAGACTTTG 58.394 38.462 3.65 0.00 42.51 2.77
164 175 6.933521 ACACACTTGCTCCATATGAGAATATC 59.066 38.462 3.65 0.00 44.42 1.63
216 227 1.069823 GACAGAGGGCACATGATCGAT 59.930 52.381 0.00 0.00 0.00 3.59
218 229 0.531532 GGACAGAGGGCACATGATCG 60.532 60.000 0.00 0.00 0.00 3.69
230 260 5.578005 TTAGTGAGAAATACGGGACAGAG 57.422 43.478 0.00 0.00 0.00 3.35
245 275 2.423538 CCCGGCCTGAAATTTTAGTGAG 59.576 50.000 8.94 0.43 0.00 3.51
252 282 1.304962 GGTCCCCGGCCTGAAATTT 60.305 57.895 0.00 0.00 0.00 1.82
278 308 1.134371 AGCTAGAAAATGACCTCGGCC 60.134 52.381 0.00 0.00 0.00 6.13
371 405 1.757682 AAGGAAAAGCAACGGACACA 58.242 45.000 0.00 0.00 0.00 3.72
372 406 3.974871 TTAAGGAAAAGCAACGGACAC 57.025 42.857 0.00 0.00 0.00 3.67
390 424 5.645929 TGCTTCTGACTTGTGACAACTTTTA 59.354 36.000 0.00 0.00 0.00 1.52
398 432 1.942657 TGCTTGCTTCTGACTTGTGAC 59.057 47.619 0.00 0.00 0.00 3.67
451 491 0.524414 CGTTTCCCCGATTCCAAACC 59.476 55.000 0.00 0.00 0.00 3.27
456 496 0.746923 CCTTCCGTTTCCCCGATTCC 60.747 60.000 0.00 0.00 0.00 3.01
522 592 0.179073 CGGATGGTCGGCTGAGATTT 60.179 55.000 0.00 0.00 0.00 2.17
534 604 1.383109 TCCTGCTGGATCGGATGGT 60.383 57.895 8.48 0.00 37.46 3.55
678 748 2.093106 ACGTCCTGCCTTCTAGTAGTG 58.907 52.381 0.00 0.00 0.00 2.74
681 751 5.655532 AGATTTTACGTCCTGCCTTCTAGTA 59.344 40.000 0.00 0.00 0.00 1.82
682 752 4.466726 AGATTTTACGTCCTGCCTTCTAGT 59.533 41.667 0.00 0.00 0.00 2.57
683 753 5.012328 AGATTTTACGTCCTGCCTTCTAG 57.988 43.478 0.00 0.00 0.00 2.43
684 754 4.439700 CGAGATTTTACGTCCTGCCTTCTA 60.440 45.833 0.00 0.00 0.00 2.10
685 755 3.676324 CGAGATTTTACGTCCTGCCTTCT 60.676 47.826 0.00 0.00 0.00 2.85
686 756 2.603560 CGAGATTTTACGTCCTGCCTTC 59.396 50.000 0.00 0.00 0.00 3.46
732 802 8.048514 CCAAATTACCATCCATTCCTTTCAAAT 58.951 33.333 0.00 0.00 0.00 2.32
738 808 5.211201 CTCCCAAATTACCATCCATTCCTT 58.789 41.667 0.00 0.00 0.00 3.36
740 810 3.321968 GCTCCCAAATTACCATCCATTCC 59.678 47.826 0.00 0.00 0.00 3.01
744 814 2.358090 CCAGCTCCCAAATTACCATCCA 60.358 50.000 0.00 0.00 0.00 3.41
746 816 2.091885 TCCCAGCTCCCAAATTACCATC 60.092 50.000 0.00 0.00 0.00 3.51
749 819 2.755952 ATCCCAGCTCCCAAATTACC 57.244 50.000 0.00 0.00 0.00 2.85
759 829 1.134371 GGTTCCTGTGTATCCCAGCTC 60.134 57.143 0.00 0.00 0.00 4.09
760 830 0.912486 GGTTCCTGTGTATCCCAGCT 59.088 55.000 0.00 0.00 0.00 4.24
761 831 0.912486 AGGTTCCTGTGTATCCCAGC 59.088 55.000 0.00 0.00 0.00 4.85
762 832 2.100916 CGTAGGTTCCTGTGTATCCCAG 59.899 54.545 1.12 0.00 0.00 4.45
763 833 2.104967 CGTAGGTTCCTGTGTATCCCA 58.895 52.381 1.12 0.00 0.00 4.37
764 834 2.884894 CGTAGGTTCCTGTGTATCCC 57.115 55.000 1.12 0.00 0.00 3.85
812 882 6.826741 CCTCCTTTCTCCGGATATTTTTGTTA 59.173 38.462 3.57 0.00 0.00 2.41
819 891 2.339769 CCCCTCCTTTCTCCGGATATT 58.660 52.381 3.57 0.00 0.00 1.28
860 932 7.143340 CCAAATCGATGAACAGCATTTATGAT 58.857 34.615 0.00 0.00 37.34 2.45
882 954 3.950794 GATCGCGGACAGTGCCCAA 62.951 63.158 6.13 0.00 0.00 4.12
892 964 2.289820 GTGTAGTACATCTGATCGCGGA 59.710 50.000 6.13 0.00 0.00 5.54
893 965 2.651701 GTGTAGTACATCTGATCGCGG 58.348 52.381 6.13 0.00 0.00 6.46
903 979 1.747709 AGGCGAGACGTGTAGTACAT 58.252 50.000 6.21 0.00 0.00 2.29
904 980 1.198408 CAAGGCGAGACGTGTAGTACA 59.802 52.381 0.00 0.00 0.00 2.90
906 982 0.169672 GCAAGGCGAGACGTGTAGTA 59.830 55.000 0.00 0.00 0.00 1.82
907 983 1.080705 GCAAGGCGAGACGTGTAGT 60.081 57.895 0.00 0.00 0.00 2.73
908 984 1.080772 TGCAAGGCGAGACGTGTAG 60.081 57.895 0.00 0.00 0.00 2.74
909 985 1.372499 GTGCAAGGCGAGACGTGTA 60.372 57.895 0.00 0.00 0.00 2.90
982 1077 2.549754 GCATGGTGTATGTATGTCAGCC 59.450 50.000 0.00 0.00 39.08 4.85
990 1085 1.138069 CGGTGAGGCATGGTGTATGTA 59.862 52.381 0.00 0.00 39.08 2.29
991 1086 0.107703 CGGTGAGGCATGGTGTATGT 60.108 55.000 0.00 0.00 39.08 2.29
992 1087 0.815213 CCGGTGAGGCATGGTGTATG 60.815 60.000 0.00 0.00 39.88 2.39
993 1088 0.980754 TCCGGTGAGGCATGGTGTAT 60.981 55.000 0.00 0.00 40.77 2.29
1022 1117 1.211969 GCTTCCGAGTGTGCGTAGA 59.788 57.895 0.00 0.00 0.00 2.59
1131 1238 0.675083 ACGTACCCATGACGAACACA 59.325 50.000 11.87 0.00 42.98 3.72
1226 1346 3.508744 ACAGTGGCAAGAAACAAACAG 57.491 42.857 0.00 0.00 0.00 3.16
1232 1352 3.303229 CGAACAAAACAGTGGCAAGAAAC 59.697 43.478 0.00 0.00 0.00 2.78
1235 1355 1.202245 GCGAACAAAACAGTGGCAAGA 60.202 47.619 0.00 0.00 0.00 3.02
1236 1356 1.199624 GCGAACAAAACAGTGGCAAG 58.800 50.000 0.00 0.00 0.00 4.01
1239 1359 1.130955 CATGCGAACAAAACAGTGGC 58.869 50.000 0.00 0.00 0.00 5.01
1240 1360 1.130955 GCATGCGAACAAAACAGTGG 58.869 50.000 0.00 0.00 0.00 4.00
1241 1361 1.782569 CTGCATGCGAACAAAACAGTG 59.217 47.619 14.09 0.00 0.00 3.66
1242 1362 1.865248 GCTGCATGCGAACAAAACAGT 60.865 47.619 14.09 0.00 0.00 3.55
1461 1586 0.530744 CCACGACGAAGAGGATGGAA 59.469 55.000 0.00 0.00 0.00 3.53
1493 1618 1.003233 GTTGGATTGGAGTCGGGAGTT 59.997 52.381 0.00 0.00 0.00 3.01
1535 1793 7.308450 TGGAGATCAATCCCATCTAAACTAG 57.692 40.000 0.00 0.00 38.72 2.57
1566 1885 1.656095 GAATCGAACGCAAGAGTCAGG 59.344 52.381 0.00 0.00 43.62 3.86
1732 2099 0.109226 CCTTCTCGTCGAACTGGTCC 60.109 60.000 0.00 0.00 0.00 4.46
1936 2303 1.674962 CTGGTGTAGTAGCGGTAGGAC 59.325 57.143 0.00 0.00 0.00 3.85
2046 2419 4.273235 TGAGCAATAACCATGAACGCTATG 59.727 41.667 0.00 0.00 0.00 2.23
2047 2420 4.450976 TGAGCAATAACCATGAACGCTAT 58.549 39.130 0.00 0.00 0.00 2.97
2048 2421 3.867857 TGAGCAATAACCATGAACGCTA 58.132 40.909 0.00 0.00 0.00 4.26
2049 2422 2.710377 TGAGCAATAACCATGAACGCT 58.290 42.857 0.00 0.00 0.00 5.07
2054 2427 4.765273 ACGTACATGAGCAATAACCATGA 58.235 39.130 0.00 0.00 39.86 3.07
2063 2436 6.926272 TGCACAATATATACGTACATGAGCAA 59.074 34.615 0.00 0.00 31.72 3.91
2064 2437 6.451393 TGCACAATATATACGTACATGAGCA 58.549 36.000 0.00 6.66 32.09 4.26
2067 2440 8.303876 AGTGATGCACAATATATACGTACATGA 58.696 33.333 0.00 0.00 36.74 3.07
2074 2450 6.032880 CGTCAGAGTGATGCACAATATATACG 59.967 42.308 0.00 0.00 36.74 3.06
2105 2593 1.498865 CTGCACCAACGGTCACTCAC 61.499 60.000 0.00 0.00 31.02 3.51
2106 2594 1.227527 CTGCACCAACGGTCACTCA 60.228 57.895 0.00 0.00 31.02 3.41
2107 2595 2.607892 GCTGCACCAACGGTCACTC 61.608 63.158 0.00 0.00 31.02 3.51
2109 2597 3.660111 GGCTGCACCAACGGTCAC 61.660 66.667 0.50 0.00 38.86 3.67
2143 2631 1.136305 TCGGAGTTCTTATTGCCCTCG 59.864 52.381 0.00 0.00 0.00 4.63
2148 2636 3.243177 GTCGTCATCGGAGTTCTTATTGC 59.757 47.826 0.00 0.00 37.69 3.56
2150 2638 3.700038 AGGTCGTCATCGGAGTTCTTATT 59.300 43.478 0.00 0.00 37.69 1.40
2373 2861 2.277120 CGAAGAGGCGGTCGTACG 60.277 66.667 9.53 9.53 32.61 3.67
2557 3045 1.003355 CGTCATGGGCAGGTGAGTT 60.003 57.895 0.00 0.00 0.00 3.01
2558 3046 2.665000 CGTCATGGGCAGGTGAGT 59.335 61.111 0.00 0.00 0.00 3.41
2752 3240 4.778143 GCCGTGGCCCTGTCGATT 62.778 66.667 0.00 0.00 34.56 3.34
2893 3381 2.520979 CCGCTCTTCTTCTTGTAGACG 58.479 52.381 0.00 0.00 0.00 4.18
2919 3407 1.891919 TAATCGCCATTGCCCTCGC 60.892 57.895 0.00 0.00 0.00 5.03
2920 3408 0.813610 TGTAATCGCCATTGCCCTCG 60.814 55.000 0.00 0.00 0.00 4.63
2921 3409 0.947244 CTGTAATCGCCATTGCCCTC 59.053 55.000 0.00 0.00 0.00 4.30
2922 3410 0.466189 CCTGTAATCGCCATTGCCCT 60.466 55.000 0.00 0.00 0.00 5.19
2923 3411 1.455383 CCCTGTAATCGCCATTGCCC 61.455 60.000 0.00 0.00 0.00 5.36
2924 3412 1.455383 CCCCTGTAATCGCCATTGCC 61.455 60.000 0.00 0.00 0.00 4.52
2925 3413 0.465460 TCCCCTGTAATCGCCATTGC 60.465 55.000 0.00 0.00 0.00 3.56
2926 3414 1.597742 CTCCCCTGTAATCGCCATTG 58.402 55.000 0.00 0.00 0.00 2.82
2927 3415 0.179018 GCTCCCCTGTAATCGCCATT 60.179 55.000 0.00 0.00 0.00 3.16
2946 3434 3.003378 CACCAATGTAGCATCAGCATCAG 59.997 47.826 0.00 0.00 45.49 2.90
2975 3469 7.645735 GGCGTAGTAGTACTAACCAGAATTAAC 59.354 40.741 19.18 4.32 31.62 2.01
2996 3490 5.653769 AGTAATTACTTACACCTCTGGCGTA 59.346 40.000 12.50 0.00 39.81 4.42
2997 3491 3.975168 AATTACTTACACCTCTGGCGT 57.025 42.857 0.00 0.00 0.00 5.68
3000 3494 7.491696 GCACTTAGTAATTACTTACACCTCTGG 59.508 40.741 22.66 3.10 39.81 3.86
3001 3495 7.220300 CGCACTTAGTAATTACTTACACCTCTG 59.780 40.741 22.66 8.71 39.81 3.35
3002 3496 7.121759 TCGCACTTAGTAATTACTTACACCTCT 59.878 37.037 22.66 0.00 39.81 3.69
3003 3497 7.253422 TCGCACTTAGTAATTACTTACACCTC 58.747 38.462 22.66 6.66 39.81 3.85
3004 3498 7.161773 TCGCACTTAGTAATTACTTACACCT 57.838 36.000 22.66 0.13 39.81 4.00
3014 3508 8.999431 TCTCTGAAAATTTCGCACTTAGTAATT 58.001 29.630 0.97 0.00 0.00 1.40
3015 3509 8.547967 TCTCTGAAAATTTCGCACTTAGTAAT 57.452 30.769 0.97 0.00 0.00 1.89
3016 3510 7.656137 ACTCTCTGAAAATTTCGCACTTAGTAA 59.344 33.333 0.97 0.00 0.00 2.24
3017 3511 7.152645 ACTCTCTGAAAATTTCGCACTTAGTA 58.847 34.615 0.97 0.00 0.00 1.82
3018 3512 5.992217 ACTCTCTGAAAATTTCGCACTTAGT 59.008 36.000 0.97 0.00 0.00 2.24
3019 3513 6.473397 ACTCTCTGAAAATTTCGCACTTAG 57.527 37.500 0.97 0.00 0.00 2.18
3020 3514 5.118664 CGACTCTCTGAAAATTTCGCACTTA 59.881 40.000 0.97 0.00 0.00 2.24
3083 3582 7.189087 ACCCCAAAATTTATGACAATCTACCT 58.811 34.615 0.00 0.00 0.00 3.08
3110 3613 5.588958 ATTGGCAGGCTAGAGAAAATTTC 57.411 39.130 0.00 0.00 0.00 2.17
3121 3624 2.732763 TGCACAAATATTGGCAGGCTA 58.267 42.857 5.81 0.00 33.81 3.93
3124 3627 2.431419 TGGATGCACAAATATTGGCAGG 59.569 45.455 13.12 0.00 39.17 4.85
3125 3628 3.804786 TGGATGCACAAATATTGGCAG 57.195 42.857 13.12 0.00 39.17 4.85
3126 3629 3.514706 AGTTGGATGCACAAATATTGGCA 59.485 39.130 10.85 10.85 39.77 4.92
3127 3630 4.127566 AGTTGGATGCACAAATATTGGC 57.872 40.909 0.00 0.00 34.12 4.52
3128 3631 6.040729 TGGATAGTTGGATGCACAAATATTGG 59.959 38.462 10.25 0.00 40.46 3.16
3129 3632 7.041635 TGGATAGTTGGATGCACAAATATTG 57.958 36.000 10.25 0.00 40.46 1.90
3130 3633 7.201938 CCTTGGATAGTTGGATGCACAAATATT 60.202 37.037 10.25 0.00 40.46 1.28
3131 3634 6.266103 CCTTGGATAGTTGGATGCACAAATAT 59.734 38.462 9.07 9.07 42.31 1.28
3132 3635 5.593909 CCTTGGATAGTTGGATGCACAAATA 59.406 40.000 0.00 0.00 35.68 1.40
3133 3636 4.403432 CCTTGGATAGTTGGATGCACAAAT 59.597 41.667 0.00 0.00 32.90 2.32
3134 3637 3.763360 CCTTGGATAGTTGGATGCACAAA 59.237 43.478 0.00 0.00 31.17 2.83
3135 3638 3.355378 CCTTGGATAGTTGGATGCACAA 58.645 45.455 0.00 0.00 0.00 3.33
3136 3639 2.357050 CCCTTGGATAGTTGGATGCACA 60.357 50.000 0.00 0.00 0.00 4.57
3137 3640 2.092429 TCCCTTGGATAGTTGGATGCAC 60.092 50.000 0.00 0.00 0.00 4.57
3138 3641 2.204463 TCCCTTGGATAGTTGGATGCA 58.796 47.619 0.00 0.00 0.00 3.96
3139 3642 2.952310 GTTCCCTTGGATAGTTGGATGC 59.048 50.000 0.00 0.00 0.00 3.91
3140 3643 4.164988 AGAGTTCCCTTGGATAGTTGGATG 59.835 45.833 0.00 0.00 0.00 3.51
3141 3644 4.164988 CAGAGTTCCCTTGGATAGTTGGAT 59.835 45.833 0.00 0.00 0.00 3.41
3142 3645 3.519510 CAGAGTTCCCTTGGATAGTTGGA 59.480 47.826 0.00 0.00 0.00 3.53
3143 3646 3.519510 TCAGAGTTCCCTTGGATAGTTGG 59.480 47.826 0.00 0.00 0.00 3.77
3144 3647 4.826274 TCAGAGTTCCCTTGGATAGTTG 57.174 45.455 0.00 0.00 0.00 3.16
3145 3648 6.394345 AATTCAGAGTTCCCTTGGATAGTT 57.606 37.500 0.00 0.00 0.00 2.24
3146 3649 6.012508 TGAAATTCAGAGTTCCCTTGGATAGT 60.013 38.462 0.00 0.00 0.00 2.12
3147 3650 6.317391 GTGAAATTCAGAGTTCCCTTGGATAG 59.683 42.308 0.00 0.00 0.00 2.08
3148 3651 6.012508 AGTGAAATTCAGAGTTCCCTTGGATA 60.013 38.462 0.00 0.00 0.00 2.59
3149 3652 5.012893 GTGAAATTCAGAGTTCCCTTGGAT 58.987 41.667 0.00 0.00 0.00 3.41
3150 3653 4.104738 AGTGAAATTCAGAGTTCCCTTGGA 59.895 41.667 0.00 0.00 0.00 3.53
3151 3654 4.401925 AGTGAAATTCAGAGTTCCCTTGG 58.598 43.478 0.00 0.00 0.00 3.61
3152 3655 6.467677 TCTAGTGAAATTCAGAGTTCCCTTG 58.532 40.000 0.00 0.00 0.00 3.61
3153 3656 6.498651 TCTCTAGTGAAATTCAGAGTTCCCTT 59.501 38.462 9.55 0.00 36.67 3.95
3154 3657 6.019748 TCTCTAGTGAAATTCAGAGTTCCCT 58.980 40.000 9.55 0.00 36.67 4.20
3155 3658 6.287589 TCTCTAGTGAAATTCAGAGTTCCC 57.712 41.667 9.55 0.00 36.67 3.97
3156 3659 8.499967 GTTTTCTCTAGTGAAATTCAGAGTTCC 58.500 37.037 18.03 0.00 36.07 3.62
3157 3660 9.267084 AGTTTTCTCTAGTGAAATTCAGAGTTC 57.733 33.333 18.03 4.43 36.07 3.01
3158 3661 9.267084 GAGTTTTCTCTAGTGAAATTCAGAGTT 57.733 33.333 18.03 2.70 43.12 3.01
3159 3662 7.596995 CGAGTTTTCTCTAGTGAAATTCAGAGT 59.403 37.037 18.03 7.98 44.16 3.24
3160 3663 7.810282 TCGAGTTTTCTCTAGTGAAATTCAGAG 59.190 37.037 18.03 0.04 44.16 3.35
3161 3664 7.658261 TCGAGTTTTCTCTAGTGAAATTCAGA 58.342 34.615 18.03 15.55 44.16 3.27
3162 3665 7.875316 TCGAGTTTTCTCTAGTGAAATTCAG 57.125 36.000 18.03 14.19 44.16 3.02
3163 3666 8.657074 TTTCGAGTTTTCTCTAGTGAAATTCA 57.343 30.769 18.03 3.96 44.16 2.57
3164 3667 8.224437 CCTTTCGAGTTTTCTCTAGTGAAATTC 58.776 37.037 18.03 16.51 44.16 2.17
3165 3668 7.173390 CCCTTTCGAGTTTTCTCTAGTGAAATT 59.827 37.037 18.03 11.14 44.16 1.82
3166 3669 6.651225 CCCTTTCGAGTTTTCTCTAGTGAAAT 59.349 38.462 18.03 6.89 44.16 2.17
3167 3670 5.989777 CCCTTTCGAGTTTTCTCTAGTGAAA 59.010 40.000 14.42 14.42 44.16 2.69
3168 3671 5.303589 TCCCTTTCGAGTTTTCTCTAGTGAA 59.696 40.000 3.12 3.12 44.16 3.18
3169 3672 4.831155 TCCCTTTCGAGTTTTCTCTAGTGA 59.169 41.667 0.00 0.00 44.16 3.41
3170 3673 5.135508 TCCCTTTCGAGTTTTCTCTAGTG 57.864 43.478 0.00 0.00 44.16 2.74
3171 3674 5.717654 AGATCCCTTTCGAGTTTTCTCTAGT 59.282 40.000 0.00 0.00 44.16 2.57
3172 3675 6.215495 AGATCCCTTTCGAGTTTTCTCTAG 57.785 41.667 0.00 0.00 44.16 2.43
3173 3676 6.607004 AAGATCCCTTTCGAGTTTTCTCTA 57.393 37.500 0.00 0.00 44.16 2.43
3174 3677 5.491323 AAGATCCCTTTCGAGTTTTCTCT 57.509 39.130 0.00 0.00 44.16 3.10
3175 3678 6.428465 AGAAAAGATCCCTTTCGAGTTTTCTC 59.572 38.462 10.63 0.00 41.46 2.87
3176 3679 6.299922 AGAAAAGATCCCTTTCGAGTTTTCT 58.700 36.000 10.63 9.00 41.46 2.52
3177 3680 6.561737 AGAAAAGATCCCTTTCGAGTTTTC 57.438 37.500 10.63 7.31 41.46 2.29
3178 3681 6.961360 AAGAAAAGATCCCTTTCGAGTTTT 57.039 33.333 10.63 0.00 41.46 2.43
3179 3682 8.637196 ATTAAGAAAAGATCCCTTTCGAGTTT 57.363 30.769 10.63 4.71 41.46 2.66
3180 3683 8.515414 CAATTAAGAAAAGATCCCTTTCGAGTT 58.485 33.333 10.63 4.96 41.46 3.01
3185 3688 8.807118 AGGTTCAATTAAGAAAAGATCCCTTTC 58.193 33.333 9.02 9.02 41.46 2.62
3189 3692 7.703058 TCAGGTTCAATTAAGAAAAGATCCC 57.297 36.000 0.00 0.00 0.00 3.85
3236 3739 4.324267 GGACGCATAATATTGTTAGGGCT 58.676 43.478 0.00 0.00 0.00 5.19
3240 3743 6.455647 TCTCTGGGACGCATAATATTGTTAG 58.544 40.000 0.00 0.00 0.00 2.34
3241 3744 6.413783 TCTCTGGGACGCATAATATTGTTA 57.586 37.500 0.00 0.00 0.00 2.41
3243 3746 4.955811 TCTCTGGGACGCATAATATTGT 57.044 40.909 0.00 0.00 0.00 2.71
3244 3747 5.300752 AGTTCTCTGGGACGCATAATATTG 58.699 41.667 0.00 0.00 0.00 1.90
3245 3748 5.305644 AGAGTTCTCTGGGACGCATAATATT 59.694 40.000 1.23 0.00 0.00 1.28
3246 3749 4.835615 AGAGTTCTCTGGGACGCATAATAT 59.164 41.667 1.23 0.00 0.00 1.28
3247 3750 4.038042 CAGAGTTCTCTGGGACGCATAATA 59.962 45.833 18.74 0.00 34.28 0.98
3248 3751 3.034635 AGAGTTCTCTGGGACGCATAAT 58.965 45.455 1.23 0.00 0.00 1.28
3250 3753 1.751351 CAGAGTTCTCTGGGACGCATA 59.249 52.381 18.74 0.00 34.28 3.14
3251 3754 0.534412 CAGAGTTCTCTGGGACGCAT 59.466 55.000 18.74 0.00 34.28 4.73
3252 3755 0.539669 TCAGAGTTCTCTGGGACGCA 60.540 55.000 23.86 6.34 38.23 5.24
3253 3756 0.603569 TTCAGAGTTCTCTGGGACGC 59.396 55.000 23.86 0.00 38.23 5.19
3254 3757 2.757868 AGATTCAGAGTTCTCTGGGACG 59.242 50.000 23.86 4.39 38.23 4.79
3255 3758 3.766591 TGAGATTCAGAGTTCTCTGGGAC 59.233 47.826 23.86 16.32 39.30 4.46
3256 3759 4.053009 TGAGATTCAGAGTTCTCTGGGA 57.947 45.455 23.86 15.76 39.30 4.37
3291 3794 8.615705 AGGTTCAGTTAAGAAAAGATCCCTTAT 58.384 33.333 0.00 0.00 31.15 1.73
3292 3795 7.883311 CAGGTTCAGTTAAGAAAAGATCCCTTA 59.117 37.037 0.00 0.00 31.15 2.69
3304 3807 4.349636 TGGTTCATCCAGGTTCAGTTAAGA 59.650 41.667 0.00 0.00 41.93 2.10
3319 3823 2.673833 AGAAACGTCGAGTGGTTCATC 58.326 47.619 15.52 3.74 0.00 2.92
3325 3829 2.218759 CAGACAAAGAAACGTCGAGTGG 59.781 50.000 0.00 0.00 37.23 4.00
3327 3831 3.114065 GTCAGACAAAGAAACGTCGAGT 58.886 45.455 0.00 0.00 37.23 4.18
3328 3832 3.113322 TGTCAGACAAAGAAACGTCGAG 58.887 45.455 0.00 0.00 37.23 4.04
3333 3837 7.962373 TGCATAATATTGTCAGACAAAGAAACG 59.038 33.333 19.92 8.94 41.96 3.60
3334 3838 9.793252 ATGCATAATATTGTCAGACAAAGAAAC 57.207 29.630 19.92 7.44 41.96 2.78
3340 3844 7.774625 TCTTGGATGCATAATATTGTCAGACAA 59.225 33.333 18.42 18.42 42.95 3.18
3342 3846 7.658982 TCTCTTGGATGCATAATATTGTCAGAC 59.341 37.037 0.00 0.00 0.00 3.51
3343 3847 7.738847 TCTCTTGGATGCATAATATTGTCAGA 58.261 34.615 0.00 0.00 0.00 3.27
3354 3859 5.682234 TTCAGAGTTCTCTTGGATGCATA 57.318 39.130 0.00 0.00 0.00 3.14
3355 3860 4.564782 TTCAGAGTTCTCTTGGATGCAT 57.435 40.909 0.00 0.00 0.00 3.96
3356 3861 4.019950 TGATTCAGAGTTCTCTTGGATGCA 60.020 41.667 0.00 0.00 0.00 3.96
3387 3894 9.220767 GCTTAAGAAAAGATCTCTTCCAAGTTA 57.779 33.333 16.39 4.31 37.42 2.24
3392 3899 6.037786 TCGCTTAAGAAAAGATCTCTTCCA 57.962 37.500 6.67 0.00 37.42 3.53
3393 3900 6.369065 TGTTCGCTTAAGAAAAGATCTCTTCC 59.631 38.462 6.67 0.00 37.42 3.46
3398 3905 7.672983 TTCATGTTCGCTTAAGAAAAGATCT 57.327 32.000 6.67 0.00 41.32 2.75
3400 3907 8.044060 TCATTCATGTTCGCTTAAGAAAAGAT 57.956 30.769 6.67 0.60 0.00 2.40
3407 3914 4.973396 TGCTTCATTCATGTTCGCTTAAG 58.027 39.130 0.00 0.00 0.00 1.85
3408 3915 5.565592 ATGCTTCATTCATGTTCGCTTAA 57.434 34.783 0.00 0.00 0.00 1.85
3409 3916 5.565592 AATGCTTCATTCATGTTCGCTTA 57.434 34.783 0.00 0.00 26.27 3.09
3411 3918 4.025015 GAATGCTTCATTCATGTTCGCT 57.975 40.909 13.01 0.00 46.50 4.93
3427 4035 6.312918 TGTCAGACTAAATAAAGGACGAATGC 59.687 38.462 1.31 0.00 0.00 3.56
3444 4052 9.236006 GGGATGCATAATATTTATTGTCAGACT 57.764 33.333 0.00 0.00 0.00 3.24
3456 4064 9.812347 TCATAGTTCTTTGGGATGCATAATATT 57.188 29.630 0.00 0.00 0.00 1.28
3460 4068 9.812347 ATATTCATAGTTCTTTGGGATGCATAA 57.188 29.630 0.00 0.00 0.00 1.90
3508 4116 7.231519 CCAGGTTCAGTTAGGAAAAGATCTTTT 59.768 37.037 29.09 29.09 44.59 2.27
3509 4117 6.717084 CCAGGTTCAGTTAGGAAAAGATCTTT 59.283 38.462 15.11 15.11 0.00 2.52
3510 4118 6.044404 TCCAGGTTCAGTTAGGAAAAGATCTT 59.956 38.462 0.88 0.88 0.00 2.40
3511 4119 5.548056 TCCAGGTTCAGTTAGGAAAAGATCT 59.452 40.000 0.00 0.00 0.00 2.75
3521 4129 4.760530 TGATCCATCCAGGTTCAGTTAG 57.239 45.455 0.00 0.00 40.39 2.34
3548 4156 8.815912 TGCACTCTATTATCAGGCTTAATGATA 58.184 33.333 2.40 0.00 38.36 2.15
3551 4159 7.065563 GGATGCACTCTATTATCAGGCTTAATG 59.934 40.741 0.00 0.00 0.00 1.90
3552 4160 7.108847 GGATGCACTCTATTATCAGGCTTAAT 58.891 38.462 0.00 0.00 0.00 1.40
3553 4161 6.467677 GGATGCACTCTATTATCAGGCTTAA 58.532 40.000 0.00 0.00 0.00 1.85
3555 4163 4.263243 GGGATGCACTCTATTATCAGGCTT 60.263 45.833 0.00 0.00 0.00 4.35
3568 4176 1.830477 AGAGTTCTCTGGGATGCACTC 59.170 52.381 1.23 0.51 32.42 3.51
3569 4177 1.554160 CAGAGTTCTCTGGGATGCACT 59.446 52.381 18.74 0.00 34.28 4.40
3578 4186 7.875316 TTTTTACGAGATTCAGAGTTCTCTG 57.125 36.000 20.01 20.01 36.94 3.35
3621 4229 6.452494 TGGTTCATTCTGTTCGGTTAAAAA 57.548 33.333 0.00 0.00 0.00 1.94
3622 4230 6.452494 TTGGTTCATTCTGTTCGGTTAAAA 57.548 33.333 0.00 0.00 0.00 1.52
3623 4231 6.263392 TGATTGGTTCATTCTGTTCGGTTAAA 59.737 34.615 0.00 0.00 0.00 1.52
3624 4232 5.765677 TGATTGGTTCATTCTGTTCGGTTAA 59.234 36.000 0.00 0.00 0.00 2.01
3625 4233 5.309638 TGATTGGTTCATTCTGTTCGGTTA 58.690 37.500 0.00 0.00 0.00 2.85
3626 4234 4.141287 TGATTGGTTCATTCTGTTCGGTT 58.859 39.130 0.00 0.00 0.00 4.44
3627 4235 3.750371 TGATTGGTTCATTCTGTTCGGT 58.250 40.909 0.00 0.00 0.00 4.69
3628 4236 4.201950 GGATGATTGGTTCATTCTGTTCGG 60.202 45.833 0.00 0.00 45.29 4.30
3629 4237 4.913376 GGATGATTGGTTCATTCTGTTCG 58.087 43.478 0.00 0.00 45.29 3.95
3638 4246 9.177608 CAGACTAAATAAAGGATGATTGGTTCA 57.822 33.333 0.00 0.00 39.12 3.18
3639 4247 9.396022 TCAGACTAAATAAAGGATGATTGGTTC 57.604 33.333 0.00 0.00 0.00 3.62
3640 4248 9.178758 GTCAGACTAAATAAAGGATGATTGGTT 57.821 33.333 0.00 0.00 0.00 3.67
3641 4249 8.328758 TGTCAGACTAAATAAAGGATGATTGGT 58.671 33.333 1.31 0.00 0.00 3.67
3642 4250 8.737168 TGTCAGACTAAATAAAGGATGATTGG 57.263 34.615 1.31 0.00 0.00 3.16
3655 4263 9.236006 GGGATGCATAATATTGTCAGACTAAAT 57.764 33.333 0.00 0.00 0.00 1.40
3656 4264 8.217111 TGGGATGCATAATATTGTCAGACTAAA 58.783 33.333 0.00 0.00 0.00 1.85
3657 4265 7.744733 TGGGATGCATAATATTGTCAGACTAA 58.255 34.615 0.00 0.00 0.00 2.24
3658 4266 7.315066 TGGGATGCATAATATTGTCAGACTA 57.685 36.000 0.00 0.00 0.00 2.59
3659 4267 6.191657 TGGGATGCATAATATTGTCAGACT 57.808 37.500 0.00 0.00 0.00 3.24
3660 4268 6.882610 TTGGGATGCATAATATTGTCAGAC 57.117 37.500 0.00 0.00 0.00 3.51
3661 4269 7.289310 TCTTTGGGATGCATAATATTGTCAGA 58.711 34.615 0.00 0.00 0.00 3.27
3662 4270 7.514784 TCTTTGGGATGCATAATATTGTCAG 57.485 36.000 0.00 0.00 0.00 3.51
3663 4271 7.560991 AGTTCTTTGGGATGCATAATATTGTCA 59.439 33.333 0.00 0.00 0.00 3.58
3664 4272 7.945134 AGTTCTTTGGGATGCATAATATTGTC 58.055 34.615 0.00 0.00 0.00 3.18
3665 4273 7.781693 AGAGTTCTTTGGGATGCATAATATTGT 59.218 33.333 0.00 0.00 0.00 2.71
3666 4274 8.080417 CAGAGTTCTTTGGGATGCATAATATTG 58.920 37.037 0.00 0.00 0.00 1.90
3667 4275 8.000709 TCAGAGTTCTTTGGGATGCATAATATT 58.999 33.333 0.00 0.00 0.00 1.28
3668 4276 7.520798 TCAGAGTTCTTTGGGATGCATAATAT 58.479 34.615 0.00 0.00 0.00 1.28
3669 4277 6.899089 TCAGAGTTCTTTGGGATGCATAATA 58.101 36.000 0.00 0.00 0.00 0.98
3670 4278 5.759059 TCAGAGTTCTTTGGGATGCATAAT 58.241 37.500 0.00 0.00 0.00 1.28
3671 4279 5.178096 TCAGAGTTCTTTGGGATGCATAA 57.822 39.130 0.00 0.00 0.00 1.90
3672 4280 4.842531 TCAGAGTTCTTTGGGATGCATA 57.157 40.909 0.00 0.00 0.00 3.14
3673 4281 3.726557 TCAGAGTTCTTTGGGATGCAT 57.273 42.857 0.00 0.00 0.00 3.96
3674 4282 3.507162 TTCAGAGTTCTTTGGGATGCA 57.493 42.857 0.00 0.00 0.00 3.96
3675 4283 4.268359 AGATTCAGAGTTCTTTGGGATGC 58.732 43.478 0.00 0.00 0.00 3.91
3676 4284 5.494724 TGAGATTCAGAGTTCTTTGGGATG 58.505 41.667 0.00 0.00 0.00 3.51
3677 4285 5.768980 TGAGATTCAGAGTTCTTTGGGAT 57.231 39.130 0.00 0.00 0.00 3.85
3678 4286 5.768980 ATGAGATTCAGAGTTCTTTGGGA 57.231 39.130 0.00 0.00 0.00 4.37
3679 4287 7.928307 TTAATGAGATTCAGAGTTCTTTGGG 57.072 36.000 0.00 0.00 0.00 4.12
3705 4313 5.030147 AGAAAAGACCCCTTCCAAGTTTTT 58.970 37.500 0.00 0.00 0.00 1.94
3706 4314 4.620723 AGAAAAGACCCCTTCCAAGTTTT 58.379 39.130 0.00 0.00 0.00 2.43
3707 4315 4.265856 AGAAAAGACCCCTTCCAAGTTT 57.734 40.909 0.00 0.00 0.00 2.66
3708 4316 3.973472 AGAAAAGACCCCTTCCAAGTT 57.027 42.857 0.00 0.00 0.00 2.66
3709 4317 3.973472 AAGAAAAGACCCCTTCCAAGT 57.027 42.857 0.00 0.00 0.00 3.16
3710 4318 5.241728 CAGTTAAGAAAAGACCCCTTCCAAG 59.758 44.000 0.00 0.00 0.00 3.61
3711 4319 5.103855 TCAGTTAAGAAAAGACCCCTTCCAA 60.104 40.000 0.00 0.00 0.00 3.53
3712 4320 4.414182 TCAGTTAAGAAAAGACCCCTTCCA 59.586 41.667 0.00 0.00 0.00 3.53
3713 4321 4.981812 TCAGTTAAGAAAAGACCCCTTCC 58.018 43.478 0.00 0.00 0.00 3.46
3714 4322 5.241064 GGTTCAGTTAAGAAAAGACCCCTTC 59.759 44.000 0.00 0.00 0.00 3.46
3715 4323 5.138276 GGTTCAGTTAAGAAAAGACCCCTT 58.862 41.667 0.00 0.00 0.00 3.95
3716 4324 4.447325 GGGTTCAGTTAAGAAAAGACCCCT 60.447 45.833 0.00 0.00 30.26 4.79
3717 4325 3.825014 GGGTTCAGTTAAGAAAAGACCCC 59.175 47.826 0.00 0.00 28.67 4.95
3718 4326 3.501062 CGGGTTCAGTTAAGAAAAGACCC 59.499 47.826 0.00 0.00 30.60 4.46
3719 4327 4.383173 TCGGGTTCAGTTAAGAAAAGACC 58.617 43.478 0.00 0.00 0.00 3.85
3720 4328 5.996669 TTCGGGTTCAGTTAAGAAAAGAC 57.003 39.130 0.00 0.00 0.00 3.01
3721 4329 6.292923 TCATTCGGGTTCAGTTAAGAAAAGA 58.707 36.000 0.00 0.00 0.00 2.52
3722 4330 6.554334 TCATTCGGGTTCAGTTAAGAAAAG 57.446 37.500 0.00 0.00 0.00 2.27
3723 4331 6.514376 GCTTCATTCGGGTTCAGTTAAGAAAA 60.514 38.462 0.00 0.00 0.00 2.29
3724 4332 5.048991 GCTTCATTCGGGTTCAGTTAAGAAA 60.049 40.000 0.00 0.00 0.00 2.52
3725 4333 4.454504 GCTTCATTCGGGTTCAGTTAAGAA 59.545 41.667 0.00 0.00 0.00 2.52
3726 4334 4.000988 GCTTCATTCGGGTTCAGTTAAGA 58.999 43.478 0.00 0.00 0.00 2.10
3727 4335 3.751175 TGCTTCATTCGGGTTCAGTTAAG 59.249 43.478 0.00 0.00 0.00 1.85
3728 4336 3.745799 TGCTTCATTCGGGTTCAGTTAA 58.254 40.909 0.00 0.00 0.00 2.01
3729 4337 3.410631 TGCTTCATTCGGGTTCAGTTA 57.589 42.857 0.00 0.00 0.00 2.24
3730 4338 2.270352 TGCTTCATTCGGGTTCAGTT 57.730 45.000 0.00 0.00 0.00 3.16
3731 4339 2.359900 GATGCTTCATTCGGGTTCAGT 58.640 47.619 0.00 0.00 0.00 3.41
3732 4340 1.672881 GGATGCTTCATTCGGGTTCAG 59.327 52.381 1.64 0.00 0.00 3.02
3733 4341 1.004161 TGGATGCTTCATTCGGGTTCA 59.996 47.619 1.64 0.00 0.00 3.18
3734 4342 1.750193 TGGATGCTTCATTCGGGTTC 58.250 50.000 1.64 0.00 0.00 3.62
3735 4343 1.818674 GTTGGATGCTTCATTCGGGTT 59.181 47.619 1.64 0.00 0.00 4.11
3736 4344 1.004745 AGTTGGATGCTTCATTCGGGT 59.995 47.619 1.64 0.00 0.00 5.28
3737 4345 1.755179 AGTTGGATGCTTCATTCGGG 58.245 50.000 1.64 0.00 0.00 5.14
3738 4346 3.855689 AAAGTTGGATGCTTCATTCGG 57.144 42.857 1.64 0.00 0.00 4.30
3739 4347 6.089417 GGTTAAAAAGTTGGATGCTTCATTCG 59.911 38.462 1.64 0.00 0.00 3.34
3740 4348 7.116805 CAGGTTAAAAAGTTGGATGCTTCATTC 59.883 37.037 1.64 0.00 0.00 2.67
3741 4349 6.930722 CAGGTTAAAAAGTTGGATGCTTCATT 59.069 34.615 1.64 0.00 0.00 2.57
3742 4350 6.267471 TCAGGTTAAAAAGTTGGATGCTTCAT 59.733 34.615 1.64 0.00 0.00 2.57
3743 4351 5.596361 TCAGGTTAAAAAGTTGGATGCTTCA 59.404 36.000 1.64 0.00 0.00 3.02
3744 4352 5.920840 GTCAGGTTAAAAAGTTGGATGCTTC 59.079 40.000 0.00 0.00 0.00 3.86
3745 4353 5.362430 TGTCAGGTTAAAAAGTTGGATGCTT 59.638 36.000 0.00 0.00 0.00 3.91
3746 4354 4.892934 TGTCAGGTTAAAAAGTTGGATGCT 59.107 37.500 0.00 0.00 0.00 3.79
3747 4355 5.195001 TGTCAGGTTAAAAAGTTGGATGC 57.805 39.130 0.00 0.00 0.00 3.91
3750 4358 9.802039 ACTATATTGTCAGGTTAAAAAGTTGGA 57.198 29.630 0.00 0.00 0.00 3.53
3751 4359 9.840427 CACTATATTGTCAGGTTAAAAAGTTGG 57.160 33.333 0.00 0.00 0.00 3.77
3752 4360 9.341899 GCACTATATTGTCAGGTTAAAAAGTTG 57.658 33.333 0.00 0.00 0.00 3.16
3753 4361 9.073475 TGCACTATATTGTCAGGTTAAAAAGTT 57.927 29.630 0.00 0.00 0.00 2.66
3754 4362 8.630054 TGCACTATATTGTCAGGTTAAAAAGT 57.370 30.769 0.00 0.00 0.00 2.66
3757 4365 9.237187 TGAATGCACTATATTGTCAGGTTAAAA 57.763 29.630 0.00 0.00 0.00 1.52
3758 4366 8.800370 TGAATGCACTATATTGTCAGGTTAAA 57.200 30.769 0.00 0.00 0.00 1.52
3759 4367 8.800370 TTGAATGCACTATATTGTCAGGTTAA 57.200 30.769 0.00 0.00 0.00 2.01
3760 4368 8.264347 TCTTGAATGCACTATATTGTCAGGTTA 58.736 33.333 0.00 0.00 0.00 2.85
3761 4369 7.112122 TCTTGAATGCACTATATTGTCAGGTT 58.888 34.615 0.00 0.00 0.00 3.50
3762 4370 6.653020 TCTTGAATGCACTATATTGTCAGGT 58.347 36.000 0.00 0.00 0.00 4.00
3763 4371 6.988580 TCTCTTGAATGCACTATATTGTCAGG 59.011 38.462 0.00 0.00 0.00 3.86
3764 4372 8.333908 GTTCTCTTGAATGCACTATATTGTCAG 58.666 37.037 0.00 0.00 34.40 3.51
3765 4373 7.823799 TGTTCTCTTGAATGCACTATATTGTCA 59.176 33.333 0.00 0.00 34.40 3.58
3766 4374 8.119226 GTGTTCTCTTGAATGCACTATATTGTC 58.881 37.037 0.00 0.00 34.40 3.18
3767 4375 7.826252 AGTGTTCTCTTGAATGCACTATATTGT 59.174 33.333 0.00 0.00 37.59 2.71
3768 4376 8.121086 CAGTGTTCTCTTGAATGCACTATATTG 58.879 37.037 0.00 0.00 37.40 1.90
3769 4377 8.043113 TCAGTGTTCTCTTGAATGCACTATATT 58.957 33.333 0.00 0.00 37.40 1.28
3770 4378 7.559486 TCAGTGTTCTCTTGAATGCACTATAT 58.441 34.615 0.00 0.00 37.40 0.86
3771 4379 6.935167 TCAGTGTTCTCTTGAATGCACTATA 58.065 36.000 0.00 0.00 37.40 1.31
3772 4380 5.798132 TCAGTGTTCTCTTGAATGCACTAT 58.202 37.500 0.00 0.00 37.40 2.12
3773 4381 5.213891 TCAGTGTTCTCTTGAATGCACTA 57.786 39.130 0.00 0.00 37.40 2.74
3774 4382 4.077300 TCAGTGTTCTCTTGAATGCACT 57.923 40.909 0.00 0.00 38.94 4.40
3775 4383 4.818534 TTCAGTGTTCTCTTGAATGCAC 57.181 40.909 0.00 0.00 34.40 4.57
3776 4384 5.311265 AGATTCAGTGTTCTCTTGAATGCA 58.689 37.500 3.90 0.00 34.40 3.96
3777 4385 5.445673 CGAGATTCAGTGTTCTCTTGAATGC 60.446 44.000 17.70 0.00 36.94 3.56
3778 4386 5.636965 ACGAGATTCAGTGTTCTCTTGAATG 59.363 40.000 17.70 8.38 36.94 2.67
3779 4387 5.788450 ACGAGATTCAGTGTTCTCTTGAAT 58.212 37.500 17.70 0.00 36.94 2.57
3780 4388 5.201713 ACGAGATTCAGTGTTCTCTTGAA 57.798 39.130 17.70 0.00 36.94 2.69
3781 4389 4.855715 ACGAGATTCAGTGTTCTCTTGA 57.144 40.909 17.70 0.00 36.94 3.02
3782 4390 7.408132 TTTTACGAGATTCAGTGTTCTCTTG 57.592 36.000 17.70 11.84 36.94 3.02
3783 4391 9.706691 TTATTTTACGAGATTCAGTGTTCTCTT 57.293 29.630 17.70 13.37 36.94 2.85
3784 4392 9.141400 GTTATTTTACGAGATTCAGTGTTCTCT 57.859 33.333 17.70 7.57 36.94 3.10
3785 4393 9.141400 AGTTATTTTACGAGATTCAGTGTTCTC 57.859 33.333 12.86 12.86 35.97 2.87
3786 4394 9.141400 GAGTTATTTTACGAGATTCAGTGTTCT 57.859 33.333 0.00 0.00 0.00 3.01
3787 4395 9.141400 AGAGTTATTTTACGAGATTCAGTGTTC 57.859 33.333 0.00 0.00 0.00 3.18
3788 4396 9.141400 GAGAGTTATTTTACGAGATTCAGTGTT 57.859 33.333 0.00 0.00 0.00 3.32
3789 4397 8.304596 TGAGAGTTATTTTACGAGATTCAGTGT 58.695 33.333 0.00 0.00 0.00 3.55
3790 4398 8.689251 TGAGAGTTATTTTACGAGATTCAGTG 57.311 34.615 0.00 0.00 0.00 3.66
3791 4399 9.360093 CTTGAGAGTTATTTTACGAGATTCAGT 57.640 33.333 0.00 0.00 0.00 3.41
3792 4400 8.812329 CCTTGAGAGTTATTTTACGAGATTCAG 58.188 37.037 0.00 0.00 0.00 3.02
3793 4401 8.528643 TCCTTGAGAGTTATTTTACGAGATTCA 58.471 33.333 0.00 0.00 0.00 2.57
3794 4402 8.928270 TCCTTGAGAGTTATTTTACGAGATTC 57.072 34.615 0.00 0.00 0.00 2.52
3795 4403 9.892130 ATTCCTTGAGAGTTATTTTACGAGATT 57.108 29.630 0.00 0.00 0.00 2.40
3796 4404 9.535878 GATTCCTTGAGAGTTATTTTACGAGAT 57.464 33.333 0.00 0.00 0.00 2.75
3797 4405 8.750298 AGATTCCTTGAGAGTTATTTTACGAGA 58.250 33.333 0.00 0.00 0.00 4.04
3798 4406 8.934507 AGATTCCTTGAGAGTTATTTTACGAG 57.065 34.615 0.00 0.00 0.00 4.18
3799 4407 9.720769 AAAGATTCCTTGAGAGTTATTTTACGA 57.279 29.630 0.00 0.00 31.91 3.43
3807 4415 6.649557 GGTTCGAAAAGATTCCTTGAGAGTTA 59.350 38.462 0.00 0.00 31.91 2.24
3814 4422 5.689383 TTCAGGTTCGAAAAGATTCCTTG 57.311 39.130 0.00 0.00 33.45 3.61
3819 4427 7.452880 TGATTCATTCAGGTTCGAAAAGATT 57.547 32.000 0.00 0.00 0.00 2.40
3856 4464 6.642707 ATGGGAAGTTCAATGACGTTTTAA 57.357 33.333 5.01 0.00 0.00 1.52
3859 4467 5.125417 CCATATGGGAAGTTCAATGACGTTT 59.875 40.000 14.52 0.00 40.01 3.60
3880 4488 5.162947 ACACCTTTCTTATGCCCATATCCAT 60.163 40.000 0.00 0.00 0.00 3.41
3885 4493 9.875708 AATTTATACACCTTTCTTATGCCCATA 57.124 29.630 0.00 0.00 0.00 2.74
3886 4494 8.782137 AATTTATACACCTTTCTTATGCCCAT 57.218 30.769 0.00 0.00 0.00 4.00
3887 4495 8.602472 AAATTTATACACCTTTCTTATGCCCA 57.398 30.769 0.00 0.00 0.00 5.36
3888 4496 9.313118 CAAAATTTATACACCTTTCTTATGCCC 57.687 33.333 0.00 0.00 0.00 5.36
3889 4497 9.869757 ACAAAATTTATACACCTTTCTTATGCC 57.130 29.630 0.00 0.00 0.00 4.40
3937 4545 9.337396 ACAAAAATTGTACTATCTGACTTCACA 57.663 29.630 0.00 0.00 43.27 3.58
3938 4546 9.599322 CACAAAAATTGTACTATCTGACTTCAC 57.401 33.333 0.00 0.00 43.23 3.18
3939 4547 9.337396 ACACAAAAATTGTACTATCTGACTTCA 57.663 29.630 0.00 0.00 43.23 3.02
3940 4548 9.599322 CACACAAAAATTGTACTATCTGACTTC 57.401 33.333 0.00 0.00 43.23 3.01
3941 4549 9.337396 TCACACAAAAATTGTACTATCTGACTT 57.663 29.630 0.00 0.00 43.23 3.01
3942 4550 8.902540 TCACACAAAAATTGTACTATCTGACT 57.097 30.769 0.00 0.00 43.23 3.41
3943 4551 9.599322 CTTCACACAAAAATTGTACTATCTGAC 57.401 33.333 0.00 0.00 43.23 3.51
3944 4552 9.337396 ACTTCACACAAAAATTGTACTATCTGA 57.663 29.630 0.00 0.00 43.23 3.27
3945 4553 9.599322 GACTTCACACAAAAATTGTACTATCTG 57.401 33.333 0.00 0.00 43.23 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.