Multiple sequence alignment - TraesCS3B01G413900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G413900 chr3B 100.000 5931 0 0 1 5931 650808445 650802515 0.000000e+00 10953.0
1 TraesCS3B01G413900 chr3B 100.000 506 0 0 6191 6696 650802255 650801750 0.000000e+00 935.0
2 TraesCS3B01G413900 chr3B 95.902 122 4 1 4620 4740 803626173 803626052 5.300000e-46 196.0
3 TraesCS3B01G413900 chr3B 93.651 126 6 2 4606 4731 427338219 427338342 3.190000e-43 187.0
4 TraesCS3B01G413900 chr3A 95.652 2162 63 11 2492 4624 631583876 631581717 0.000000e+00 3443.0
5 TraesCS3B01G413900 chr3A 91.911 2151 93 33 369 2488 631586059 631583959 0.000000e+00 2933.0
6 TraesCS3B01G413900 chr3A 95.436 1205 48 4 4728 5930 631581718 631580519 0.000000e+00 1914.0
7 TraesCS3B01G413900 chr3A 93.985 133 2 2 223 354 631586175 631586048 5.300000e-46 196.0
8 TraesCS3B01G413900 chr3D 95.379 2164 66 14 2491 4624 487815383 487813224 0.000000e+00 3411.0
9 TraesCS3B01G413900 chr3D 91.055 2180 81 41 369 2481 487817607 487815475 0.000000e+00 2841.0
10 TraesCS3B01G413900 chr3D 96.893 869 21 3 4728 5596 487813225 487812363 0.000000e+00 1450.0
11 TraesCS3B01G413900 chr3D 95.667 300 12 1 5633 5931 487812364 487812065 1.310000e-131 481.0
12 TraesCS3B01G413900 chr3D 92.208 154 11 1 6270 6423 487812025 487811873 4.070000e-52 217.0
13 TraesCS3B01G413900 chr3D 86.702 188 7 5 6465 6651 487811741 487811571 6.850000e-45 193.0
14 TraesCS3B01G413900 chr3D 92.035 113 3 2 243 354 487817703 487817596 3.230000e-33 154.0
15 TraesCS3B01G413900 chr3D 97.222 36 1 0 6191 6226 487812059 487812024 2.020000e-05 62.1
16 TraesCS3B01G413900 chr4A 93.741 2157 90 19 2491 4624 618037259 618039393 0.000000e+00 3193.0
17 TraesCS3B01G413900 chr4A 94.472 1212 54 9 4728 5931 618039392 618040598 0.000000e+00 1855.0
18 TraesCS3B01G413900 chr4A 94.472 1212 54 9 4728 5931 621444973 621443767 0.000000e+00 1855.0
19 TraesCS3B01G413900 chr4A 92.837 1089 47 9 3559 4624 621446052 621444972 0.000000e+00 1550.0
20 TraesCS3B01G413900 chr4A 94.154 804 35 8 2491 3294 621447944 621447153 0.000000e+00 1214.0
21 TraesCS3B01G413900 chr4A 90.426 188 13 2 6513 6696 618041027 618041213 6.710000e-60 243.0
22 TraesCS3B01G413900 chr4A 90.811 185 12 2 6516 6696 621443337 621443154 6.710000e-60 243.0
23 TraesCS3B01G413900 chr4A 91.603 131 9 2 4616 4746 575976174 575976046 5.340000e-41 180.0
24 TraesCS3B01G413900 chr4A 90.511 137 11 2 4620 4755 735363863 735363998 5.340000e-41 180.0
25 TraesCS3B01G413900 chr4A 94.444 108 5 1 2382 2488 618037070 618037177 1.490000e-36 165.0
26 TraesCS3B01G413900 chr4A 93.519 108 6 1 2382 2488 621448133 621448026 6.950000e-35 159.0
27 TraesCS3B01G413900 chrUn 93.815 1924 76 18 2491 4391 362281714 362279811 0.000000e+00 2854.0
28 TraesCS3B01G413900 chrUn 94.224 1212 57 9 4728 5931 345813600 345814806 0.000000e+00 1838.0
29 TraesCS3B01G413900 chrUn 92.837 1089 47 9 3559 4624 345812521 345813601 0.000000e+00 1550.0
30 TraesCS3B01G413900 chrUn 91.139 158 10 1 6516 6669 472852036 472851879 1.890000e-50 211.0
31 TraesCS3B01G413900 chr7A 85.641 780 93 13 3857 4626 238593077 238592307 0.000000e+00 802.0
32 TraesCS3B01G413900 chr4B 85.219 778 96 15 3859 4626 593368388 593367620 0.000000e+00 782.0
33 TraesCS3B01G413900 chr4B 86.248 589 74 6 4790 5376 593367594 593367011 3.410000e-177 632.0
34 TraesCS3B01G413900 chr2D 84.981 779 97 14 3857 4626 522904053 522903286 0.000000e+00 773.0
35 TraesCS3B01G413900 chr2D 85.254 590 79 7 4790 5376 522903260 522902676 9.610000e-168 601.0
36 TraesCS3B01G413900 chr2D 84.277 159 25 0 4744 4902 549017932 549018090 8.990000e-34 156.0
37 TraesCS3B01G413900 chr1B 84.833 778 96 16 3859 4626 152319115 152318350 0.000000e+00 763.0
38 TraesCS3B01G413900 chr1B 83.871 217 21 5 5165 5376 152316573 152316366 1.910000e-45 195.0
39 TraesCS3B01G413900 chr7B 85.908 589 76 6 4790 5376 679784883 679784300 7.380000e-174 621.0
40 TraesCS3B01G413900 chr7B 96.522 115 4 0 4616 4730 513956255 513956141 2.460000e-44 191.0
41 TraesCS3B01G413900 chr5B 98.198 111 2 0 4619 4729 70910684 70910794 1.910000e-45 195.0
42 TraesCS3B01G413900 chr5B 88.535 157 11 6 4610 4765 697185053 697184903 4.120000e-42 183.0
43 TraesCS3B01G413900 chr5B 83.221 149 21 2 4923 5067 18274268 18274120 4.210000e-27 134.0
44 TraesCS3B01G413900 chr5B 83.221 149 21 2 4923 5067 18303334 18303186 4.210000e-27 134.0
45 TraesCS3B01G413900 chr6A 97.345 113 3 0 4619 4731 158087913 158088025 6.850000e-45 193.0
46 TraesCS3B01G413900 chr5A 93.023 129 7 2 4616 4743 702691831 702691704 3.190000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G413900 chr3B 650801750 650808445 6695 True 5944.0000 10953 100.000000 1 6696 2 chr3B.!!$R2 6695
1 TraesCS3B01G413900 chr3A 631580519 631586175 5656 True 2121.5000 3443 94.246000 223 5930 4 chr3A.!!$R1 5707
2 TraesCS3B01G413900 chr3D 487811571 487817703 6132 True 1101.1375 3411 93.395125 243 6651 8 chr3D.!!$R1 6408
3 TraesCS3B01G413900 chr4A 618037070 618041213 4143 False 1364.0000 3193 93.270750 2382 6696 4 chr4A.!!$F2 4314
4 TraesCS3B01G413900 chr4A 621443154 621448133 4979 True 1004.2000 1855 93.158600 2382 6696 5 chr4A.!!$R2 4314
5 TraesCS3B01G413900 chrUn 362279811 362281714 1903 True 2854.0000 2854 93.815000 2491 4391 1 chrUn.!!$R1 1900
6 TraesCS3B01G413900 chrUn 345812521 345814806 2285 False 1694.0000 1838 93.530500 3559 5931 2 chrUn.!!$F1 2372
7 TraesCS3B01G413900 chr7A 238592307 238593077 770 True 802.0000 802 85.641000 3857 4626 1 chr7A.!!$R1 769
8 TraesCS3B01G413900 chr4B 593367011 593368388 1377 True 707.0000 782 85.733500 3859 5376 2 chr4B.!!$R1 1517
9 TraesCS3B01G413900 chr2D 522902676 522904053 1377 True 687.0000 773 85.117500 3857 5376 2 chr2D.!!$R1 1519
10 TraesCS3B01G413900 chr1B 152316366 152319115 2749 True 479.0000 763 84.352000 3859 5376 2 chr1B.!!$R1 1517
11 TraesCS3B01G413900 chr7B 679784300 679784883 583 True 621.0000 621 85.908000 4790 5376 1 chr7B.!!$R2 586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
160 161 0.030638 GCAAGAAAGCAAGCAACCGA 59.969 50.000 0.00 0.00 0.00 4.69 F
215 216 0.035881 CACACCAGGACATGTGCTCT 59.964 55.000 17.98 2.40 39.79 4.09 F
345 346 0.251916 ATTACACCGCCAGCTAAGCA 59.748 50.000 8.49 0.00 0.00 3.91 F
350 351 0.323629 ACCGCCAGCTAAGCAGTTAA 59.676 50.000 8.49 0.00 0.00 2.01 F
1557 1630 0.451957 CTCGCGGATTCGATCTCTCG 60.452 60.000 6.13 0.00 46.41 4.04 F
2389 2468 0.526211 CTTGGCGTAAGGGGAAAAGC 59.474 55.000 0.00 0.00 38.28 3.51 F
3030 3192 3.010420 CTCCTCGGATGGTTTCTTTTCC 58.990 50.000 0.00 0.00 0.00 3.13 F
4637 5671 1.067776 GCATATACTCCCTCCGTTCGG 60.068 57.143 4.74 4.74 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 1837 0.613292 ACCAACTGGCACCACACAAA 60.613 50.000 0.00 0.00 39.32 2.83 R
2116 2195 2.045131 CAGGAGGGCAAGCAGCTTC 61.045 63.158 4.07 0.23 44.79 3.86 R
2365 2444 1.580059 TCCCCTTACGCCAAGAATCT 58.420 50.000 0.00 0.00 36.22 2.40 R
2389 2468 2.100197 TGGTTGACCTCTATCACCTCG 58.900 52.381 1.34 0.00 36.82 4.63 R
2685 2847 0.536006 AGTGCACAACTTCCCTCAGC 60.536 55.000 21.04 0.00 34.57 4.26 R
3703 4701 0.179059 TTGACGCAAGCTTCACTCCA 60.179 50.000 0.00 0.00 45.62 3.86 R
4707 5741 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89 R
6234 8695 0.035317 CCTTCACAGGCTACACTGCA 59.965 55.000 0.00 0.00 42.21 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.965119 AGATTGCCAAAACGGTATTCTC 57.035 40.909 0.00 0.00 35.84 2.87
24 25 4.589908 AGATTGCCAAAACGGTATTCTCT 58.410 39.130 0.00 0.00 35.84 3.10
25 26 4.396166 AGATTGCCAAAACGGTATTCTCTG 59.604 41.667 0.00 0.00 35.84 3.35
26 27 3.410631 TGCCAAAACGGTATTCTCTGA 57.589 42.857 0.00 0.00 36.97 3.27
27 28 3.745799 TGCCAAAACGGTATTCTCTGAA 58.254 40.909 0.00 0.00 36.97 3.02
28 29 3.751175 TGCCAAAACGGTATTCTCTGAAG 59.249 43.478 0.00 0.00 36.97 3.02
29 30 3.127030 GCCAAAACGGTATTCTCTGAAGG 59.873 47.826 0.00 0.00 36.97 3.46
30 31 3.689649 CCAAAACGGTATTCTCTGAAGGG 59.310 47.826 0.00 0.00 0.00 3.95
31 32 4.564821 CCAAAACGGTATTCTCTGAAGGGA 60.565 45.833 0.00 0.00 0.00 4.20
32 33 4.903045 AAACGGTATTCTCTGAAGGGAA 57.097 40.909 0.00 0.00 0.00 3.97
33 34 4.903045 AACGGTATTCTCTGAAGGGAAA 57.097 40.909 0.00 0.00 0.00 3.13
34 35 4.903045 ACGGTATTCTCTGAAGGGAAAA 57.097 40.909 0.00 0.00 0.00 2.29
35 36 5.437191 ACGGTATTCTCTGAAGGGAAAAT 57.563 39.130 0.00 0.00 0.00 1.82
36 37 5.186198 ACGGTATTCTCTGAAGGGAAAATG 58.814 41.667 0.00 0.00 0.00 2.32
37 38 4.576463 CGGTATTCTCTGAAGGGAAAATGG 59.424 45.833 0.00 0.00 0.00 3.16
38 39 5.629133 CGGTATTCTCTGAAGGGAAAATGGA 60.629 44.000 0.00 0.00 0.00 3.41
39 40 5.590663 GGTATTCTCTGAAGGGAAAATGGAC 59.409 44.000 0.00 0.00 0.00 4.02
40 41 3.334583 TCTCTGAAGGGAAAATGGACG 57.665 47.619 0.00 0.00 0.00 4.79
41 42 2.903784 TCTCTGAAGGGAAAATGGACGA 59.096 45.455 0.00 0.00 0.00 4.20
42 43 3.519510 TCTCTGAAGGGAAAATGGACGAT 59.480 43.478 0.00 0.00 0.00 3.73
43 44 4.019321 TCTCTGAAGGGAAAATGGACGATT 60.019 41.667 0.00 0.00 0.00 3.34
44 45 5.188948 TCTCTGAAGGGAAAATGGACGATTA 59.811 40.000 0.00 0.00 0.00 1.75
45 46 5.183228 TCTGAAGGGAAAATGGACGATTAC 58.817 41.667 0.00 0.00 0.00 1.89
46 47 4.912586 TGAAGGGAAAATGGACGATTACA 58.087 39.130 0.00 0.00 0.00 2.41
47 48 5.317808 TGAAGGGAAAATGGACGATTACAA 58.682 37.500 0.00 0.00 0.00 2.41
48 49 5.770663 TGAAGGGAAAATGGACGATTACAAA 59.229 36.000 0.00 0.00 0.00 2.83
49 50 6.265649 TGAAGGGAAAATGGACGATTACAAAA 59.734 34.615 0.00 0.00 0.00 2.44
50 51 6.658188 AGGGAAAATGGACGATTACAAAAA 57.342 33.333 0.00 0.00 0.00 1.94
79 80 9.737427 GAAAATAGAAAATAGCTCTTTTAGGGC 57.263 33.333 9.56 0.00 0.00 5.19
80 81 7.497925 AATAGAAAATAGCTCTTTTAGGGCG 57.502 36.000 9.56 0.00 0.00 6.13
81 82 5.099042 AGAAAATAGCTCTTTTAGGGCGA 57.901 39.130 9.56 0.00 0.00 5.54
82 83 5.497474 AGAAAATAGCTCTTTTAGGGCGAA 58.503 37.500 9.56 0.00 0.00 4.70
83 84 5.354513 AGAAAATAGCTCTTTTAGGGCGAAC 59.645 40.000 9.56 0.00 0.00 3.95
84 85 4.489306 AATAGCTCTTTTAGGGCGAACT 57.511 40.909 0.00 0.00 0.00 3.01
85 86 5.609533 AATAGCTCTTTTAGGGCGAACTA 57.390 39.130 0.00 0.00 0.00 2.24
86 87 3.975168 AGCTCTTTTAGGGCGAACTAA 57.025 42.857 0.00 0.00 0.00 2.24
87 88 4.281898 AGCTCTTTTAGGGCGAACTAAA 57.718 40.909 7.60 7.60 40.21 1.85
88 89 4.648651 AGCTCTTTTAGGGCGAACTAAAA 58.351 39.130 17.87 17.87 45.57 1.52
89 90 5.067954 AGCTCTTTTAGGGCGAACTAAAAA 58.932 37.500 18.82 12.24 46.42 1.94
90 91 5.181433 AGCTCTTTTAGGGCGAACTAAAAAG 59.819 40.000 18.82 18.03 46.42 2.27
91 92 5.619309 GCTCTTTTAGGGCGAACTAAAAAGG 60.619 44.000 18.82 15.74 46.42 3.11
92 93 5.623169 TCTTTTAGGGCGAACTAAAAAGGA 58.377 37.500 18.82 13.52 46.42 3.36
93 94 6.063404 TCTTTTAGGGCGAACTAAAAAGGAA 58.937 36.000 18.82 8.10 46.42 3.36
94 95 6.546772 TCTTTTAGGGCGAACTAAAAAGGAAA 59.453 34.615 18.82 3.89 46.42 3.13
95 96 6.712179 TTTAGGGCGAACTAAAAAGGAAAA 57.288 33.333 8.85 0.00 39.31 2.29
96 97 6.712179 TTAGGGCGAACTAAAAAGGAAAAA 57.288 33.333 0.00 0.00 30.43 1.94
115 116 4.584327 AAAAATTTACTTGCGTGCTCCT 57.416 36.364 0.00 0.00 0.00 3.69
116 117 4.584327 AAAATTTACTTGCGTGCTCCTT 57.416 36.364 0.00 0.00 0.00 3.36
117 118 3.559238 AATTTACTTGCGTGCTCCTTG 57.441 42.857 0.00 0.00 0.00 3.61
118 119 1.234821 TTTACTTGCGTGCTCCTTGG 58.765 50.000 0.00 0.00 0.00 3.61
119 120 0.394938 TTACTTGCGTGCTCCTTGGA 59.605 50.000 0.00 0.00 0.00 3.53
120 121 0.613260 TACTTGCGTGCTCCTTGGAT 59.387 50.000 0.00 0.00 0.00 3.41
121 122 0.957395 ACTTGCGTGCTCCTTGGATG 60.957 55.000 0.00 0.00 0.00 3.51
123 124 2.437359 GCGTGCTCCTTGGATGCT 60.437 61.111 10.67 0.00 44.24 3.79
124 125 2.467826 GCGTGCTCCTTGGATGCTC 61.468 63.158 10.67 7.44 44.24 4.26
125 126 2.169789 CGTGCTCCTTGGATGCTCG 61.170 63.158 15.21 15.21 37.36 5.03
126 127 2.124983 TGCTCCTTGGATGCTCGC 60.125 61.111 10.67 2.88 0.00 5.03
127 128 2.188994 GCTCCTTGGATGCTCGCT 59.811 61.111 0.00 0.00 0.00 4.93
128 129 1.329913 TGCTCCTTGGATGCTCGCTA 61.330 55.000 10.67 0.00 0.00 4.26
129 130 0.878086 GCTCCTTGGATGCTCGCTAC 60.878 60.000 0.00 0.00 0.00 3.58
130 131 0.596083 CTCCTTGGATGCTCGCTACG 60.596 60.000 0.00 0.00 0.00 3.51
131 132 2.240500 CCTTGGATGCTCGCTACGC 61.241 63.158 0.00 0.00 0.00 4.42
132 133 1.227089 CTTGGATGCTCGCTACGCT 60.227 57.895 0.00 0.00 0.00 5.07
133 134 0.030773 CTTGGATGCTCGCTACGCTA 59.969 55.000 0.00 0.00 0.00 4.26
134 135 0.030773 TTGGATGCTCGCTACGCTAG 59.969 55.000 0.00 0.00 0.00 3.42
135 136 1.731257 GGATGCTCGCTACGCTAGC 60.731 63.158 4.06 4.06 45.59 3.42
154 155 2.323059 GCAAGTAGCAAGAAAGCAAGC 58.677 47.619 0.00 0.00 44.79 4.01
155 156 2.287788 GCAAGTAGCAAGAAAGCAAGCA 60.288 45.455 0.00 0.00 44.79 3.91
156 157 3.796504 GCAAGTAGCAAGAAAGCAAGCAA 60.797 43.478 0.00 0.00 44.79 3.91
157 158 3.632855 AGTAGCAAGAAAGCAAGCAAC 57.367 42.857 0.00 0.00 36.85 4.17
158 159 2.294512 AGTAGCAAGAAAGCAAGCAACC 59.705 45.455 0.00 0.00 36.85 3.77
159 160 0.031178 AGCAAGAAAGCAAGCAACCG 59.969 50.000 0.00 0.00 36.85 4.44
160 161 0.030638 GCAAGAAAGCAAGCAACCGA 59.969 50.000 0.00 0.00 0.00 4.69
161 162 1.535860 GCAAGAAAGCAAGCAACCGAA 60.536 47.619 0.00 0.00 0.00 4.30
162 163 2.808244 CAAGAAAGCAAGCAACCGAAA 58.192 42.857 0.00 0.00 0.00 3.46
163 164 3.186119 CAAGAAAGCAAGCAACCGAAAA 58.814 40.909 0.00 0.00 0.00 2.29
164 165 3.518634 AGAAAGCAAGCAACCGAAAAA 57.481 38.095 0.00 0.00 0.00 1.94
209 210 3.799281 AAAAACACACACCAGGACATG 57.201 42.857 0.00 0.00 0.00 3.21
210 211 2.435372 AAACACACACCAGGACATGT 57.565 45.000 0.00 0.00 0.00 3.21
213 214 4.806936 CACACCAGGACATGTGCT 57.193 55.556 14.93 14.93 39.79 4.40
214 215 2.548178 CACACCAGGACATGTGCTC 58.452 57.895 17.98 0.00 39.79 4.26
215 216 0.035881 CACACCAGGACATGTGCTCT 59.964 55.000 17.98 2.40 39.79 4.09
216 217 0.035881 ACACCAGGACATGTGCTCTG 59.964 55.000 17.98 16.84 35.90 3.35
217 218 0.035881 CACCAGGACATGTGCTCTGT 59.964 55.000 17.98 14.39 0.00 3.41
218 219 0.767375 ACCAGGACATGTGCTCTGTT 59.233 50.000 17.98 0.94 0.00 3.16
219 220 1.162698 CCAGGACATGTGCTCTGTTG 58.837 55.000 17.98 6.73 0.00 3.33
220 221 0.520404 CAGGACATGTGCTCTGTTGC 59.480 55.000 17.98 0.00 0.00 4.17
221 222 0.607489 AGGACATGTGCTCTGTTGCC 60.607 55.000 14.93 0.00 0.00 4.52
293 294 3.185594 TCTGTCCTGAAATTAACAACGCG 59.814 43.478 3.53 3.53 0.00 6.01
321 322 4.690184 CATGCTCTCATGCTAACACAAA 57.310 40.909 0.00 0.00 43.00 2.83
322 323 4.659088 CATGCTCTCATGCTAACACAAAG 58.341 43.478 0.00 0.00 43.00 2.77
323 324 3.076621 TGCTCTCATGCTAACACAAAGG 58.923 45.455 0.00 0.00 0.00 3.11
341 342 1.557832 AGGAAATTACACCGCCAGCTA 59.442 47.619 0.00 0.00 0.00 3.32
343 344 2.354821 GGAAATTACACCGCCAGCTAAG 59.645 50.000 0.00 0.00 0.00 2.18
344 345 1.379527 AATTACACCGCCAGCTAAGC 58.620 50.000 0.00 0.00 0.00 3.09
345 346 0.251916 ATTACACCGCCAGCTAAGCA 59.748 50.000 8.49 0.00 0.00 3.91
346 347 0.391130 TTACACCGCCAGCTAAGCAG 60.391 55.000 8.49 0.00 0.00 4.24
347 348 1.541310 TACACCGCCAGCTAAGCAGT 61.541 55.000 8.49 0.22 0.00 4.40
348 349 1.672356 CACCGCCAGCTAAGCAGTT 60.672 57.895 8.49 0.00 0.00 3.16
349 350 0.391130 CACCGCCAGCTAAGCAGTTA 60.391 55.000 8.49 0.00 0.00 2.24
350 351 0.323629 ACCGCCAGCTAAGCAGTTAA 59.676 50.000 8.49 0.00 0.00 2.01
351 352 0.727398 CCGCCAGCTAAGCAGTTAAC 59.273 55.000 8.49 0.00 0.00 2.01
352 353 1.676014 CCGCCAGCTAAGCAGTTAACT 60.676 52.381 1.12 1.12 0.00 2.24
353 354 2.418197 CCGCCAGCTAAGCAGTTAACTA 60.418 50.000 8.04 0.00 0.00 2.24
354 355 2.603560 CGCCAGCTAAGCAGTTAACTAC 59.396 50.000 8.04 2.17 0.00 2.73
355 356 3.596214 GCCAGCTAAGCAGTTAACTACA 58.404 45.455 8.04 0.00 0.00 2.74
356 357 4.192317 GCCAGCTAAGCAGTTAACTACAT 58.808 43.478 8.04 0.00 0.00 2.29
357 358 4.636206 GCCAGCTAAGCAGTTAACTACATT 59.364 41.667 8.04 6.13 0.00 2.71
358 359 5.220681 GCCAGCTAAGCAGTTAACTACATTC 60.221 44.000 8.04 0.00 0.00 2.67
359 360 5.005779 CCAGCTAAGCAGTTAACTACATTCG 59.994 44.000 8.04 1.47 0.00 3.34
360 361 5.005779 CAGCTAAGCAGTTAACTACATTCGG 59.994 44.000 8.04 0.00 0.00 4.30
361 362 5.105473 AGCTAAGCAGTTAACTACATTCGGA 60.105 40.000 8.04 0.00 0.00 4.55
362 363 5.579511 GCTAAGCAGTTAACTACATTCGGAA 59.420 40.000 8.04 0.00 0.00 4.30
363 364 6.091713 GCTAAGCAGTTAACTACATTCGGAAA 59.908 38.462 8.04 0.00 0.00 3.13
364 365 6.870971 AAGCAGTTAACTACATTCGGAAAA 57.129 33.333 8.04 0.00 0.00 2.29
365 366 6.870971 AGCAGTTAACTACATTCGGAAAAA 57.129 33.333 8.04 0.00 0.00 1.94
409 411 2.888834 TTTTTCTCCCTGCAACAAGC 57.111 45.000 0.00 0.00 45.96 4.01
410 412 2.071778 TTTTCTCCCTGCAACAAGCT 57.928 45.000 0.00 0.00 45.94 3.74
411 413 1.321474 TTTCTCCCTGCAACAAGCTG 58.679 50.000 0.00 0.00 45.94 4.24
412 414 1.174712 TTCTCCCTGCAACAAGCTGC 61.175 55.000 0.00 0.00 45.94 5.25
505 507 4.570663 GGCGGACGGACCAGATCG 62.571 72.222 0.00 0.00 38.90 3.69
591 593 5.612725 AAAGGAAGAGAGATCAGATCACC 57.387 43.478 13.14 4.17 0.00 4.02
747 776 2.774007 CTACTGTTGCGCTGTTTATGC 58.226 47.619 9.73 0.00 0.00 3.14
865 909 1.527370 GGCCCACTAGTCATGGTCC 59.473 63.158 0.00 0.00 35.23 4.46
881 925 2.202987 CCGCTGATCCTGTCTGGC 60.203 66.667 0.00 0.00 35.26 4.85
927 972 4.522789 TGGTTAAAGTGGAAGAATTCTGCC 59.477 41.667 24.12 24.12 46.56 4.85
1407 1480 1.224592 CCGGAACCCTAGCAGCAAT 59.775 57.895 0.00 0.00 0.00 3.56
1557 1630 0.451957 CTCGCGGATTCGATCTCTCG 60.452 60.000 6.13 0.00 46.41 4.04
1572 1645 3.417275 CTCGCCGTACTGCCTCCTG 62.417 68.421 3.50 0.00 0.00 3.86
1613 1686 1.760192 AGCTCCAGCCTTATTTGCAG 58.240 50.000 0.00 0.00 43.38 4.41
1672 1749 0.754472 AATTGCTGCAGTTGCTGGTT 59.246 45.000 16.64 0.00 42.66 3.67
1699 1776 1.676967 CACAAGCTCTTCCCTGGCC 60.677 63.158 0.00 0.00 0.00 5.36
1752 1831 3.775316 CAGGTACTCCCTATTTCACCTGT 59.225 47.826 9.84 0.00 43.86 4.00
1758 1837 5.892348 ACTCCCTATTTCACCTGTCAAAAT 58.108 37.500 0.00 0.00 0.00 1.82
1903 1982 1.406614 GCTGAGACATCCTGGGTTCTG 60.407 57.143 0.00 0.00 0.00 3.02
1958 2037 2.565841 GCTGGAAATTAGCTCCGATGT 58.434 47.619 0.00 0.00 38.14 3.06
1964 2043 4.346129 GAAATTAGCTCCGATGTTTGCTG 58.654 43.478 0.00 0.00 37.02 4.41
2299 2378 3.508762 GATTGTGTCCGTGTCGATTAGT 58.491 45.455 0.00 0.00 0.00 2.24
2365 2444 3.511540 CAGATGCCATATCGGAGAAGGTA 59.488 47.826 0.00 0.00 43.58 3.08
2389 2468 0.526211 CTTGGCGTAAGGGGAAAAGC 59.474 55.000 0.00 0.00 38.28 3.51
2452 2531 3.325870 CGACAAGCTGGTAATGTTCTGA 58.674 45.455 0.00 0.00 0.00 3.27
2517 2679 8.785329 TGTAAGAAATGTTATGTATGCTGACA 57.215 30.769 0.00 0.00 0.00 3.58
2524 2686 5.610398 TGTTATGTATGCTGACATGTAGGG 58.390 41.667 0.00 0.00 40.31 3.53
2531 2693 7.797062 TGTATGCTGACATGTAGGGTTTTATA 58.203 34.615 0.00 0.00 37.04 0.98
2534 2696 8.766994 ATGCTGACATGTAGGGTTTTATATTT 57.233 30.769 0.00 0.00 34.35 1.40
2535 2697 8.588290 TGCTGACATGTAGGGTTTTATATTTT 57.412 30.769 0.00 0.00 0.00 1.82
2568 2730 6.498304 ACACACATTAAGCTTTCAAGACTTG 58.502 36.000 3.20 9.03 0.00 3.16
2612 2774 6.702716 TTTTAGACAAACCAACTTCGGAAT 57.297 33.333 0.00 0.00 0.00 3.01
2685 2847 9.740239 CATTTTGTACATTATCCTCCAATCTTG 57.260 33.333 0.00 0.00 0.00 3.02
2759 2921 9.167311 GTATTGATAAAGACTGAATCAACTGGT 57.833 33.333 12.55 3.42 41.14 4.00
3030 3192 3.010420 CTCCTCGGATGGTTTCTTTTCC 58.990 50.000 0.00 0.00 0.00 3.13
3147 3309 6.939730 TGATGAAAATGCAGACCAAGTTAGTA 59.060 34.615 0.00 0.00 0.00 1.82
3337 3499 4.339247 AGTGACCTTGACAATGAACCTTTG 59.661 41.667 0.00 0.00 0.00 2.77
3554 3716 3.935818 TTTTTGCCCGGGATGTATCTA 57.064 42.857 29.31 0.00 0.00 1.98
3610 4608 7.559170 CAGATATGGGAGGATATTTTGGGATTC 59.441 40.741 0.00 0.00 0.00 2.52
3622 4620 4.439305 TTTGGGATTCGAAAATGCAGAG 57.561 40.909 0.00 0.00 35.08 3.35
3703 4701 2.353958 CCTGATGCTGTGCCCTGT 59.646 61.111 0.00 0.00 0.00 4.00
3850 4848 7.554959 TCTACCAGAGGTTAATTTTCTGAGT 57.445 36.000 12.65 11.18 40.54 3.41
3866 4885 9.965902 ATTTTCTGAGTTATGGTCTCTTTGTAT 57.034 29.630 0.00 0.00 33.59 2.29
3883 4902 7.568349 TCTTTGTATCAACTATCATCAAGCCT 58.432 34.615 0.00 0.00 0.00 4.58
3892 4911 6.491714 ACTATCATCAAGCCTGTCATACTT 57.508 37.500 0.00 0.00 0.00 2.24
4073 5094 2.723124 AGTTAACCTGCGCATTTTGG 57.277 45.000 12.24 11.83 0.00 3.28
4118 5145 5.006941 GCACATTTTGGATATGAATGTTGGC 59.993 40.000 0.00 0.00 40.84 4.52
4447 5481 4.142609 TCTTGGCTCGCATTTCTTCTAT 57.857 40.909 0.00 0.00 0.00 1.98
4594 5628 5.181811 TCTTCTAATTCGTGACGTTCAGGTA 59.818 40.000 4.40 0.00 34.22 3.08
4625 5659 2.614259 AGCCTGGCTGTAGCATATACT 58.386 47.619 22.71 0.00 44.36 2.12
4626 5660 2.564947 AGCCTGGCTGTAGCATATACTC 59.435 50.000 22.71 0.00 44.36 2.59
4627 5661 2.354203 GCCTGGCTGTAGCATATACTCC 60.354 54.545 12.43 0.00 44.36 3.85
4628 5662 2.234908 CCTGGCTGTAGCATATACTCCC 59.765 54.545 6.18 0.00 44.36 4.30
4629 5663 3.169099 CTGGCTGTAGCATATACTCCCT 58.831 50.000 6.18 0.00 44.36 4.20
4630 5664 3.165875 TGGCTGTAGCATATACTCCCTC 58.834 50.000 6.18 0.00 44.36 4.30
4631 5665 2.498078 GGCTGTAGCATATACTCCCTCC 59.502 54.545 6.18 0.00 44.36 4.30
4632 5666 2.164624 GCTGTAGCATATACTCCCTCCG 59.835 54.545 0.00 0.00 41.59 4.63
4633 5667 3.422796 CTGTAGCATATACTCCCTCCGT 58.577 50.000 0.00 0.00 0.00 4.69
4634 5668 3.827302 CTGTAGCATATACTCCCTCCGTT 59.173 47.826 0.00 0.00 0.00 4.44
4635 5669 3.825014 TGTAGCATATACTCCCTCCGTTC 59.175 47.826 0.00 0.00 0.00 3.95
4636 5670 1.887198 AGCATATACTCCCTCCGTTCG 59.113 52.381 0.00 0.00 0.00 3.95
4637 5671 1.067776 GCATATACTCCCTCCGTTCGG 60.068 57.143 4.74 4.74 0.00 4.30
4638 5672 2.511659 CATATACTCCCTCCGTTCGGA 58.488 52.381 13.34 13.34 0.00 4.55
4639 5673 2.734755 TATACTCCCTCCGTTCGGAA 57.265 50.000 14.79 0.00 33.41 4.30
4640 5674 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
4641 5675 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
4642 5676 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4643 5677 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4644 5678 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4645 5679 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4646 5680 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4647 5681 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4648 5682 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4649 5683 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
4650 5684 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
4651 5685 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
4652 5686 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
4653 5687 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
4654 5688 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
4655 5689 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
4656 5690 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
4657 5691 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
4658 5692 4.868171 CGGAATTACTTGTCTCGGAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
4659 5693 5.350365 CGGAATTACTTGTCTCGGAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
4660 5694 6.037172 CGGAATTACTTGTCTCGGAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
4661 5695 7.189512 GGAATTACTTGTCTCGGAAATGAATG 58.810 38.462 0.00 0.00 0.00 2.67
4662 5696 5.545658 TTACTTGTCTCGGAAATGAATGC 57.454 39.130 0.00 0.00 0.00 3.56
4663 5697 3.411446 ACTTGTCTCGGAAATGAATGCA 58.589 40.909 0.00 0.00 0.00 3.96
4664 5698 4.012374 ACTTGTCTCGGAAATGAATGCAT 58.988 39.130 0.00 0.00 35.92 3.96
4665 5699 4.095483 ACTTGTCTCGGAAATGAATGCATC 59.905 41.667 0.00 0.00 32.35 3.91
4666 5700 3.877559 TGTCTCGGAAATGAATGCATCT 58.122 40.909 0.00 0.00 32.35 2.90
4667 5701 5.022282 TGTCTCGGAAATGAATGCATCTA 57.978 39.130 0.00 0.00 32.35 1.98
4668 5702 5.052481 TGTCTCGGAAATGAATGCATCTAG 58.948 41.667 0.00 0.00 32.35 2.43
4669 5703 5.163416 TGTCTCGGAAATGAATGCATCTAGA 60.163 40.000 0.00 0.00 32.35 2.43
4670 5704 5.755375 GTCTCGGAAATGAATGCATCTAGAA 59.245 40.000 0.00 0.00 32.35 2.10
4671 5705 5.755375 TCTCGGAAATGAATGCATCTAGAAC 59.245 40.000 0.00 0.00 32.35 3.01
4672 5706 5.674525 TCGGAAATGAATGCATCTAGAACT 58.325 37.500 0.00 0.00 32.35 3.01
4673 5707 6.816136 TCGGAAATGAATGCATCTAGAACTA 58.184 36.000 0.00 0.00 32.35 2.24
4674 5708 7.272244 TCGGAAATGAATGCATCTAGAACTAA 58.728 34.615 0.00 0.00 32.35 2.24
4675 5709 7.768582 TCGGAAATGAATGCATCTAGAACTAAA 59.231 33.333 0.00 0.00 32.35 1.85
4676 5710 8.397906 CGGAAATGAATGCATCTAGAACTAAAA 58.602 33.333 0.00 0.00 32.35 1.52
4703 5737 8.637196 ACATCTAGATACATCCATTTCTACGA 57.363 34.615 4.54 0.00 0.00 3.43
4704 5738 8.516234 ACATCTAGATACATCCATTTCTACGAC 58.484 37.037 4.54 0.00 0.00 4.34
4705 5739 8.515414 CATCTAGATACATCCATTTCTACGACA 58.485 37.037 4.54 0.00 0.00 4.35
4706 5740 8.459911 TCTAGATACATCCATTTCTACGACAA 57.540 34.615 0.00 0.00 0.00 3.18
4707 5741 8.568794 TCTAGATACATCCATTTCTACGACAAG 58.431 37.037 0.00 0.00 0.00 3.16
4708 5742 7.113658 AGATACATCCATTTCTACGACAAGT 57.886 36.000 0.00 0.00 0.00 3.16
4709 5743 8.234136 AGATACATCCATTTCTACGACAAGTA 57.766 34.615 0.00 0.00 0.00 2.24
4710 5744 8.692710 AGATACATCCATTTCTACGACAAGTAA 58.307 33.333 0.00 0.00 34.45 2.24
4711 5745 9.477484 GATACATCCATTTCTACGACAAGTAAT 57.523 33.333 0.00 0.00 34.45 1.89
4712 5746 9.832445 ATACATCCATTTCTACGACAAGTAATT 57.168 29.630 0.00 0.00 34.45 1.40
4713 5747 8.197988 ACATCCATTTCTACGACAAGTAATTC 57.802 34.615 0.00 0.00 34.45 2.17
4714 5748 7.280205 ACATCCATTTCTACGACAAGTAATTCC 59.720 37.037 0.00 0.00 34.45 3.01
4715 5749 5.808540 TCCATTTCTACGACAAGTAATTCCG 59.191 40.000 0.00 0.00 34.45 4.30
4716 5750 5.808540 CCATTTCTACGACAAGTAATTCCGA 59.191 40.000 0.00 0.00 34.45 4.55
4717 5751 6.311935 CCATTTCTACGACAAGTAATTCCGAA 59.688 38.462 0.00 0.00 34.45 4.30
4718 5752 6.695292 TTTCTACGACAAGTAATTCCGAAC 57.305 37.500 0.00 0.00 34.45 3.95
4719 5753 4.406069 TCTACGACAAGTAATTCCGAACG 58.594 43.478 0.00 0.00 34.45 3.95
4720 5754 2.331194 ACGACAAGTAATTCCGAACGG 58.669 47.619 6.94 6.94 0.00 4.44
4721 5755 2.030007 ACGACAAGTAATTCCGAACGGA 60.030 45.455 12.04 12.04 43.52 4.69
4722 5756 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
4723 5757 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4724 5758 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4725 5759 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4726 5760 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4751 5785 1.341531 ACTGACAGTGCACAGGTAGAC 59.658 52.381 21.04 5.83 38.30 2.59
4770 5804 1.407618 ACGACCGCTGCATTACTGATA 59.592 47.619 0.00 0.00 0.00 2.15
4772 5806 3.254903 ACGACCGCTGCATTACTGATATA 59.745 43.478 0.00 0.00 0.00 0.86
5109 6149 8.270799 GTGCTTTAATATTGCAATAACATGCTG 58.729 33.333 22.37 10.82 46.54 4.41
5218 7634 9.117183 AGTTTTTAAAGTTAACTACCCAGTGAG 57.883 33.333 8.92 0.00 34.36 3.51
5219 7635 8.896744 GTTTTTAAAGTTAACTACCCAGTGAGT 58.103 33.333 8.92 0.00 34.36 3.41
5442 7859 4.399618 TCGGAGATTAAGAAGTGGTCTCTG 59.600 45.833 0.00 0.00 41.47 3.35
5487 7904 4.272748 GCGAAAGGTGACTGACTAGTTTTT 59.727 41.667 0.00 0.00 42.68 1.94
5488 7905 5.464389 GCGAAAGGTGACTGACTAGTTTTTA 59.536 40.000 0.00 0.00 42.68 1.52
5489 7906 6.147328 GCGAAAGGTGACTGACTAGTTTTTAT 59.853 38.462 0.00 0.00 42.68 1.40
5491 7908 8.861101 CGAAAGGTGACTGACTAGTTTTTATAG 58.139 37.037 0.00 0.00 42.68 1.31
5575 7992 7.158021 ACTAATCCATGCTAGCTGATAGAAAC 58.842 38.462 17.23 0.00 32.76 2.78
5598 8016 1.555967 AACCGGGCAAAGCATATGTT 58.444 45.000 6.32 0.00 0.00 2.71
5599 8017 0.817013 ACCGGGCAAAGCATATGTTG 59.183 50.000 6.32 3.24 0.00 3.33
5626 8044 3.837146 ACAGTTGTGATCTCATCTCACCT 59.163 43.478 5.57 0.00 41.87 4.00
5642 8060 1.059098 ACCTGAGACATTGGCACTGA 58.941 50.000 12.15 0.00 0.00 3.41
5668 8086 1.080705 GGTTCCTGTCGTCTCCGTG 60.081 63.158 0.00 0.00 35.01 4.94
5799 8217 8.791675 TGATTCATGTTGTATTTTGTAAGCTCA 58.208 29.630 0.00 0.00 0.00 4.26
5860 8279 5.163426 TGCTGTGTTGATGTTCAAAGGAAAT 60.163 36.000 0.00 0.00 38.22 2.17
5863 8282 7.581213 TGTGTTGATGTTCAAAGGAAATAGT 57.419 32.000 0.00 0.00 38.22 2.12
6226 8687 6.258230 TGCTATGTTGATGTTCCAAGAAAG 57.742 37.500 0.00 0.00 0.00 2.62
6227 8688 6.003326 TGCTATGTTGATGTTCCAAGAAAGA 58.997 36.000 0.00 0.00 0.00 2.52
6228 8689 6.149973 TGCTATGTTGATGTTCCAAGAAAGAG 59.850 38.462 0.00 0.00 0.00 2.85
6229 8690 5.972107 ATGTTGATGTTCCAAGAAAGAGG 57.028 39.130 0.00 0.00 0.00 3.69
6230 8691 4.144297 TGTTGATGTTCCAAGAAAGAGGG 58.856 43.478 0.00 0.00 0.00 4.30
6231 8692 3.439857 TGATGTTCCAAGAAAGAGGGG 57.560 47.619 0.00 0.00 0.00 4.79
6232 8693 2.095461 GATGTTCCAAGAAAGAGGGGC 58.905 52.381 0.00 0.00 0.00 5.80
6233 8694 0.850100 TGTTCCAAGAAAGAGGGGCA 59.150 50.000 0.00 0.00 0.00 5.36
6234 8695 1.428912 TGTTCCAAGAAAGAGGGGCAT 59.571 47.619 0.00 0.00 0.00 4.40
6235 8696 1.821136 GTTCCAAGAAAGAGGGGCATG 59.179 52.381 0.00 0.00 0.00 4.06
6236 8697 0.323725 TCCAAGAAAGAGGGGCATGC 60.324 55.000 9.90 9.90 0.00 4.06
6237 8698 0.612732 CCAAGAAAGAGGGGCATGCA 60.613 55.000 21.36 0.00 0.00 3.96
6238 8699 0.815734 CAAGAAAGAGGGGCATGCAG 59.184 55.000 21.36 0.00 0.00 4.41
6239 8700 0.407139 AAGAAAGAGGGGCATGCAGT 59.593 50.000 21.36 2.18 0.00 4.40
6240 8701 0.323178 AGAAAGAGGGGCATGCAGTG 60.323 55.000 21.36 0.00 0.00 3.66
6241 8702 0.610232 GAAAGAGGGGCATGCAGTGT 60.610 55.000 21.36 0.00 0.00 3.55
6242 8703 0.698238 AAAGAGGGGCATGCAGTGTA 59.302 50.000 21.36 0.00 0.00 2.90
6243 8704 0.254178 AAGAGGGGCATGCAGTGTAG 59.746 55.000 21.36 0.00 0.00 2.74
6244 8705 1.821332 GAGGGGCATGCAGTGTAGC 60.821 63.158 21.36 0.00 0.00 3.58
6245 8706 2.830370 GGGGCATGCAGTGTAGCC 60.830 66.667 21.36 9.24 46.28 3.93
6246 8707 2.273449 GGGCATGCAGTGTAGCCT 59.727 61.111 21.36 0.00 46.23 4.58
6247 8708 2.117156 GGGCATGCAGTGTAGCCTG 61.117 63.158 21.36 0.18 46.23 4.85
6248 8709 1.377725 GGCATGCAGTGTAGCCTGT 60.378 57.895 21.36 0.00 43.70 4.00
6249 8710 1.651240 GGCATGCAGTGTAGCCTGTG 61.651 60.000 21.36 0.00 43.70 3.66
6250 8711 0.674581 GCATGCAGTGTAGCCTGTGA 60.675 55.000 14.21 0.00 34.84 3.58
6251 8712 1.812235 CATGCAGTGTAGCCTGTGAA 58.188 50.000 0.00 0.00 34.84 3.18
6252 8713 1.736126 CATGCAGTGTAGCCTGTGAAG 59.264 52.381 0.00 0.00 34.84 3.02
6253 8714 0.035317 TGCAGTGTAGCCTGTGAAGG 59.965 55.000 0.00 0.00 34.84 3.46
6261 8722 2.034687 CCTGTGAAGGCCCCTGTG 59.965 66.667 0.00 0.00 0.00 3.66
6262 8723 2.528818 CCTGTGAAGGCCCCTGTGA 61.529 63.158 0.00 0.00 0.00 3.58
6263 8724 1.687612 CTGTGAAGGCCCCTGTGAT 59.312 57.895 0.00 0.00 0.00 3.06
6264 8725 0.679002 CTGTGAAGGCCCCTGTGATG 60.679 60.000 0.00 0.00 0.00 3.07
6265 8726 2.048603 GTGAAGGCCCCTGTGATGC 61.049 63.158 0.00 0.00 0.00 3.91
6266 8727 2.233566 TGAAGGCCCCTGTGATGCT 61.234 57.895 0.00 0.00 0.00 3.79
6267 8728 0.913934 TGAAGGCCCCTGTGATGCTA 60.914 55.000 0.00 0.00 0.00 3.49
6268 8729 0.475906 GAAGGCCCCTGTGATGCTAT 59.524 55.000 0.00 0.00 0.00 2.97
6269 8730 1.699634 GAAGGCCCCTGTGATGCTATA 59.300 52.381 0.00 0.00 0.00 1.31
6270 8731 1.819753 AGGCCCCTGTGATGCTATAA 58.180 50.000 0.00 0.00 0.00 0.98
6293 8754 4.202315 ACCATAGTTGTACTTGTGCACAGA 60.202 41.667 20.59 10.29 0.00 3.41
6310 8771 5.473039 GCACAGAGCATATTGGTTCTTTTT 58.527 37.500 0.00 0.00 44.79 1.94
6366 8827 1.532437 TCGAGCAGCAACTGTGAAATG 59.468 47.619 0.00 0.00 33.43 2.32
6424 8885 2.103042 GCTGGTGCTAGCTCGTTGG 61.103 63.158 17.23 4.69 40.52 3.77
6426 8887 2.820037 GGTGCTAGCTCGTTGGCC 60.820 66.667 17.23 0.00 0.00 5.36
6427 8888 2.820037 GTGCTAGCTCGTTGGCCC 60.820 66.667 17.23 0.00 0.00 5.80
6428 8889 4.096003 TGCTAGCTCGTTGGCCCC 62.096 66.667 17.23 0.00 0.00 5.80
6429 8890 3.787001 GCTAGCTCGTTGGCCCCT 61.787 66.667 7.70 0.00 0.00 4.79
6431 8892 2.606519 TAGCTCGTTGGCCCCTGT 60.607 61.111 0.00 0.00 0.00 4.00
6434 8895 2.429930 CTCGTTGGCCCCTGTGAA 59.570 61.111 0.00 0.00 0.00 3.18
6435 8896 1.966451 CTCGTTGGCCCCTGTGAAC 60.966 63.158 0.00 0.00 0.00 3.18
6437 8898 2.260869 CGTTGGCCCCTGTGAACTG 61.261 63.158 0.00 0.00 0.00 3.16
6438 8899 1.152756 GTTGGCCCCTGTGAACTGT 60.153 57.895 0.00 0.00 0.00 3.55
6439 8900 1.152777 TTGGCCCCTGTGAACTGTG 60.153 57.895 0.00 0.00 0.00 3.66
6441 8902 1.380302 GGCCCCTGTGAACTGTGAT 59.620 57.895 0.00 0.00 0.00 3.06
6442 8903 0.962356 GGCCCCTGTGAACTGTGATG 60.962 60.000 0.00 0.00 0.00 3.07
6443 8904 1.589716 GCCCCTGTGAACTGTGATGC 61.590 60.000 0.00 0.00 0.00 3.91
6444 8905 0.037303 CCCCTGTGAACTGTGATGCT 59.963 55.000 0.00 0.00 0.00 3.79
6447 8908 2.289631 CCCTGTGAACTGTGATGCTGTA 60.290 50.000 0.00 0.00 0.00 2.74
6448 8909 3.402110 CCTGTGAACTGTGATGCTGTAA 58.598 45.455 0.00 0.00 0.00 2.41
6449 8910 3.187227 CCTGTGAACTGTGATGCTGTAAC 59.813 47.826 0.00 0.00 0.00 2.50
6450 8911 3.138304 TGTGAACTGTGATGCTGTAACC 58.862 45.455 0.00 0.00 0.00 2.85
6453 8914 4.935205 GTGAACTGTGATGCTGTAACCATA 59.065 41.667 0.00 0.00 0.00 2.74
6454 8915 5.063944 GTGAACTGTGATGCTGTAACCATAG 59.936 44.000 0.00 0.00 0.00 2.23
6455 8916 3.535561 ACTGTGATGCTGTAACCATAGC 58.464 45.455 0.00 0.00 39.24 2.97
6456 8917 3.198635 ACTGTGATGCTGTAACCATAGCT 59.801 43.478 0.00 0.00 39.50 3.32
6458 8919 3.055167 TGTGATGCTGTAACCATAGCTGT 60.055 43.478 0.00 0.00 39.50 4.40
6460 8921 4.747108 GTGATGCTGTAACCATAGCTGTAG 59.253 45.833 0.00 0.00 39.50 2.74
6461 8922 3.179443 TGCTGTAACCATAGCTGTAGC 57.821 47.619 0.00 0.00 39.50 3.58
6487 9083 3.089284 GTTTAGGATGGGTTGGTGGAAG 58.911 50.000 0.00 0.00 0.00 3.46
6488 9084 1.295020 TAGGATGGGTTGGTGGAAGG 58.705 55.000 0.00 0.00 0.00 3.46
6490 9086 0.407918 GGATGGGTTGGTGGAAGGAA 59.592 55.000 0.00 0.00 0.00 3.36
6493 9089 1.822425 TGGGTTGGTGGAAGGAACTA 58.178 50.000 0.00 0.00 38.49 2.24
6499 9095 4.204799 GTTGGTGGAAGGAACTAAACTGT 58.795 43.478 0.00 0.00 38.49 3.55
6514 9110 7.797038 ACTAAACTGTTGTACCAAAAGTAGG 57.203 36.000 0.44 0.00 0.00 3.18
6562 9158 2.332654 CCTTAACACCCACGCTGGC 61.333 63.158 0.00 0.00 35.79 4.85
6665 9265 2.482839 GCACTGATCCTGCTACTTCTCC 60.483 54.545 5.42 0.00 0.00 3.71
6669 9269 4.211125 CTGATCCTGCTACTTCTCCACTA 58.789 47.826 0.00 0.00 0.00 2.74
6670 9270 4.610333 TGATCCTGCTACTTCTCCACTAA 58.390 43.478 0.00 0.00 0.00 2.24
6683 9283 8.409358 ACTTCTCCACTAAATAGCACAAATTT 57.591 30.769 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.260936 CAGAGAATACCGTTTTGGCAATCTAT 59.739 38.462 0.00 0.00 43.94 1.98
1 2 5.584649 CAGAGAATACCGTTTTGGCAATCTA 59.415 40.000 0.00 0.00 43.94 1.98
2 3 4.396166 CAGAGAATACCGTTTTGGCAATCT 59.604 41.667 0.00 0.00 43.94 2.40
3 4 4.394920 TCAGAGAATACCGTTTTGGCAATC 59.605 41.667 0.00 0.00 43.94 2.67
4 5 4.331968 TCAGAGAATACCGTTTTGGCAAT 58.668 39.130 0.00 0.00 43.94 3.56
5 6 3.745799 TCAGAGAATACCGTTTTGGCAA 58.254 40.909 0.00 0.00 43.94 4.52
6 7 3.410631 TCAGAGAATACCGTTTTGGCA 57.589 42.857 0.00 0.00 43.94 4.92
7 8 3.127030 CCTTCAGAGAATACCGTTTTGGC 59.873 47.826 0.00 0.00 43.94 4.52
8 9 3.689649 CCCTTCAGAGAATACCGTTTTGG 59.310 47.826 0.00 0.00 46.41 3.28
9 10 4.575885 TCCCTTCAGAGAATACCGTTTTG 58.424 43.478 0.00 0.00 0.00 2.44
10 11 4.903045 TCCCTTCAGAGAATACCGTTTT 57.097 40.909 0.00 0.00 0.00 2.43
11 12 4.903045 TTCCCTTCAGAGAATACCGTTT 57.097 40.909 0.00 0.00 0.00 3.60
12 13 4.903045 TTTCCCTTCAGAGAATACCGTT 57.097 40.909 0.00 0.00 0.00 4.44
13 14 4.903045 TTTTCCCTTCAGAGAATACCGT 57.097 40.909 0.00 0.00 0.00 4.83
14 15 4.576463 CCATTTTCCCTTCAGAGAATACCG 59.424 45.833 0.00 0.00 0.00 4.02
15 16 5.590663 GTCCATTTTCCCTTCAGAGAATACC 59.409 44.000 0.00 0.00 0.00 2.73
16 17 5.294552 CGTCCATTTTCCCTTCAGAGAATAC 59.705 44.000 0.00 0.00 0.00 1.89
17 18 5.188948 TCGTCCATTTTCCCTTCAGAGAATA 59.811 40.000 0.00 0.00 0.00 1.75
18 19 4.019321 TCGTCCATTTTCCCTTCAGAGAAT 60.019 41.667 0.00 0.00 0.00 2.40
19 20 3.326588 TCGTCCATTTTCCCTTCAGAGAA 59.673 43.478 0.00 0.00 0.00 2.87
20 21 2.903784 TCGTCCATTTTCCCTTCAGAGA 59.096 45.455 0.00 0.00 0.00 3.10
21 22 3.334583 TCGTCCATTTTCCCTTCAGAG 57.665 47.619 0.00 0.00 0.00 3.35
22 23 4.301072 AATCGTCCATTTTCCCTTCAGA 57.699 40.909 0.00 0.00 0.00 3.27
23 24 4.941263 TGTAATCGTCCATTTTCCCTTCAG 59.059 41.667 0.00 0.00 0.00 3.02
24 25 4.912586 TGTAATCGTCCATTTTCCCTTCA 58.087 39.130 0.00 0.00 0.00 3.02
25 26 5.890424 TTGTAATCGTCCATTTTCCCTTC 57.110 39.130 0.00 0.00 0.00 3.46
26 27 6.658188 TTTTGTAATCGTCCATTTTCCCTT 57.342 33.333 0.00 0.00 0.00 3.95
27 28 6.658188 TTTTTGTAATCGTCCATTTTCCCT 57.342 33.333 0.00 0.00 0.00 4.20
53 54 9.737427 GCCCTAAAAGAGCTATTTTCTATTTTC 57.263 33.333 21.55 3.93 36.65 2.29
54 55 8.406297 CGCCCTAAAAGAGCTATTTTCTATTTT 58.594 33.333 21.55 0.00 38.21 1.82
55 56 7.773690 TCGCCCTAAAAGAGCTATTTTCTATTT 59.226 33.333 21.55 0.57 34.35 1.40
56 57 7.280356 TCGCCCTAAAAGAGCTATTTTCTATT 58.720 34.615 21.55 1.31 34.35 1.73
57 58 6.827727 TCGCCCTAAAAGAGCTATTTTCTAT 58.172 36.000 21.55 1.69 34.35 1.98
58 59 6.229936 TCGCCCTAAAAGAGCTATTTTCTA 57.770 37.500 21.55 5.66 34.35 2.10
59 60 5.099042 TCGCCCTAAAAGAGCTATTTTCT 57.901 39.130 21.55 2.80 34.35 2.52
60 61 5.354513 AGTTCGCCCTAAAAGAGCTATTTTC 59.645 40.000 21.55 7.51 34.35 2.29
61 62 5.254115 AGTTCGCCCTAAAAGAGCTATTTT 58.746 37.500 21.62 21.62 36.40 1.82
62 63 4.844884 AGTTCGCCCTAAAAGAGCTATTT 58.155 39.130 0.00 0.00 0.00 1.40
63 64 4.489306 AGTTCGCCCTAAAAGAGCTATT 57.511 40.909 0.00 0.00 0.00 1.73
64 65 5.609533 TTAGTTCGCCCTAAAAGAGCTAT 57.390 39.130 0.00 0.00 30.10 2.97
65 66 5.410355 TTTAGTTCGCCCTAAAAGAGCTA 57.590 39.130 0.00 0.00 34.76 3.32
66 67 3.975168 TTAGTTCGCCCTAAAAGAGCT 57.025 42.857 0.00 0.00 0.00 4.09
67 68 5.366829 TTTTTAGTTCGCCCTAAAAGAGC 57.633 39.130 14.53 0.00 43.81 4.09
68 69 5.704053 TCCTTTTTAGTTCGCCCTAAAAGAG 59.296 40.000 14.53 14.04 43.81 2.85
69 70 5.623169 TCCTTTTTAGTTCGCCCTAAAAGA 58.377 37.500 14.53 9.72 43.81 2.52
70 71 5.952526 TCCTTTTTAGTTCGCCCTAAAAG 57.047 39.130 14.53 0.00 43.81 2.27
71 72 6.712179 TTTCCTTTTTAGTTCGCCCTAAAA 57.288 33.333 12.30 12.30 42.30 1.52
72 73 6.712179 TTTTCCTTTTTAGTTCGCCCTAAA 57.288 33.333 3.21 3.21 35.63 1.85
73 74 6.712179 TTTTTCCTTTTTAGTTCGCCCTAA 57.288 33.333 0.00 0.00 0.00 2.69
104 105 2.334946 GCATCCAAGGAGCACGCAA 61.335 57.895 0.00 0.00 0.00 4.85
105 106 2.747460 GCATCCAAGGAGCACGCA 60.747 61.111 0.00 0.00 0.00 5.24
106 107 2.437359 AGCATCCAAGGAGCACGC 60.437 61.111 11.34 4.56 0.00 5.34
107 108 2.169789 CGAGCATCCAAGGAGCACG 61.170 63.158 12.65 12.65 0.00 5.34
108 109 2.467826 GCGAGCATCCAAGGAGCAC 61.468 63.158 11.34 5.91 0.00 4.40
109 110 1.329913 TAGCGAGCATCCAAGGAGCA 61.330 55.000 11.34 0.00 0.00 4.26
110 111 0.878086 GTAGCGAGCATCCAAGGAGC 60.878 60.000 0.00 0.00 0.00 4.70
111 112 0.596083 CGTAGCGAGCATCCAAGGAG 60.596 60.000 0.00 0.00 0.00 3.69
112 113 1.437573 CGTAGCGAGCATCCAAGGA 59.562 57.895 0.00 0.00 0.00 3.36
113 114 4.018609 CGTAGCGAGCATCCAAGG 57.981 61.111 0.00 0.00 0.00 3.61
131 132 4.671250 GCTTGCTTTCTTGCTACTTGCTAG 60.671 45.833 0.00 0.00 44.01 3.42
132 133 3.189287 GCTTGCTTTCTTGCTACTTGCTA 59.811 43.478 0.00 0.00 43.37 3.49
133 134 2.030451 GCTTGCTTTCTTGCTACTTGCT 60.030 45.455 0.00 0.00 43.37 3.91
134 135 2.287788 TGCTTGCTTTCTTGCTACTTGC 60.288 45.455 0.00 0.00 43.25 4.01
135 136 3.631145 TGCTTGCTTTCTTGCTACTTG 57.369 42.857 0.00 0.00 0.00 3.16
136 137 3.243535 GGTTGCTTGCTTTCTTGCTACTT 60.244 43.478 0.00 0.00 33.22 2.24
137 138 2.294512 GGTTGCTTGCTTTCTTGCTACT 59.705 45.455 0.00 0.00 33.22 2.57
138 139 2.666026 GGTTGCTTGCTTTCTTGCTAC 58.334 47.619 0.00 0.00 0.00 3.58
139 140 1.266718 CGGTTGCTTGCTTTCTTGCTA 59.733 47.619 0.00 0.00 0.00 3.49
140 141 0.031178 CGGTTGCTTGCTTTCTTGCT 59.969 50.000 0.00 0.00 0.00 3.91
141 142 0.030638 TCGGTTGCTTGCTTTCTTGC 59.969 50.000 0.00 0.00 0.00 4.01
142 143 2.490328 TTCGGTTGCTTGCTTTCTTG 57.510 45.000 0.00 0.00 0.00 3.02
143 144 3.518634 TTTTCGGTTGCTTGCTTTCTT 57.481 38.095 0.00 0.00 0.00 2.52
144 145 3.518634 TTTTTCGGTTGCTTGCTTTCT 57.481 38.095 0.00 0.00 0.00 2.52
189 190 3.096092 ACATGTCCTGGTGTGTGTTTTT 58.904 40.909 0.00 0.00 0.00 1.94
190 191 2.426738 CACATGTCCTGGTGTGTGTTTT 59.573 45.455 15.57 0.00 40.54 2.43
191 192 2.023673 CACATGTCCTGGTGTGTGTTT 58.976 47.619 15.57 0.00 40.54 2.83
192 193 1.679139 CACATGTCCTGGTGTGTGTT 58.321 50.000 15.57 0.00 40.54 3.32
193 194 0.819259 GCACATGTCCTGGTGTGTGT 60.819 55.000 20.87 9.51 45.66 3.72
194 195 0.535780 AGCACATGTCCTGGTGTGTG 60.536 55.000 14.94 16.56 45.66 3.82
195 196 0.250467 GAGCACATGTCCTGGTGTGT 60.250 55.000 14.94 6.66 45.66 3.72
196 197 0.035881 AGAGCACATGTCCTGGTGTG 59.964 55.000 10.63 10.63 46.42 3.82
197 198 0.035881 CAGAGCACATGTCCTGGTGT 59.964 55.000 0.00 0.00 37.35 4.16
198 199 0.035881 ACAGAGCACATGTCCTGGTG 59.964 55.000 18.22 8.62 38.05 4.17
199 200 0.767375 AACAGAGCACATGTCCTGGT 59.233 50.000 18.22 12.15 0.00 4.00
200 201 1.162698 CAACAGAGCACATGTCCTGG 58.837 55.000 18.22 4.48 0.00 4.45
201 202 0.520404 GCAACAGAGCACATGTCCTG 59.480 55.000 14.46 14.46 0.00 3.86
202 203 0.607489 GGCAACAGAGCACATGTCCT 60.607 55.000 0.00 0.00 35.83 3.85
203 204 1.878775 GGCAACAGAGCACATGTCC 59.121 57.895 0.00 0.00 35.83 4.02
204 205 1.499056 CGGCAACAGAGCACATGTC 59.501 57.895 0.00 0.00 35.83 3.06
205 206 2.620112 GCGGCAACAGAGCACATGT 61.620 57.895 0.00 0.00 35.83 3.21
206 207 2.177531 GCGGCAACAGAGCACATG 59.822 61.111 0.00 0.00 35.83 3.21
207 208 3.058160 GGCGGCAACAGAGCACAT 61.058 61.111 3.07 0.00 35.83 3.21
218 219 3.058773 TTTATTGCAGCGGCGGCA 61.059 55.556 23.51 23.51 45.35 5.69
219 220 2.579518 GTTTATTGCAGCGGCGGC 60.580 61.111 18.29 18.29 45.35 6.53
220 221 0.387878 TTTGTTTATTGCAGCGGCGG 60.388 50.000 9.78 0.00 45.35 6.13
221 222 0.707822 GTTTGTTTATTGCAGCGGCG 59.292 50.000 0.51 0.51 45.35 6.46
313 314 4.023021 GGCGGTGTAATTTCCTTTGTGTTA 60.023 41.667 0.00 0.00 0.00 2.41
319 320 1.544246 GCTGGCGGTGTAATTTCCTTT 59.456 47.619 0.00 0.00 0.00 3.11
320 321 1.173913 GCTGGCGGTGTAATTTCCTT 58.826 50.000 0.00 0.00 0.00 3.36
321 322 0.328258 AGCTGGCGGTGTAATTTCCT 59.672 50.000 0.00 0.00 0.00 3.36
322 323 2.032680 TAGCTGGCGGTGTAATTTCC 57.967 50.000 0.00 0.00 0.00 3.13
323 324 2.223272 GCTTAGCTGGCGGTGTAATTTC 60.223 50.000 0.00 0.00 0.00 2.17
341 342 6.870971 TTTTCCGAATGTAGTTAACTGCTT 57.129 33.333 22.00 14.40 0.00 3.91
362 363 9.884636 AAGAAAGTTTGGTTAACTGCTATTTTT 57.115 25.926 5.42 0.00 46.34 1.94
363 364 9.884636 AAAGAAAGTTTGGTTAACTGCTATTTT 57.115 25.926 5.42 0.68 46.34 1.82
364 365 9.884636 AAAAGAAAGTTTGGTTAACTGCTATTT 57.115 25.926 5.42 2.43 46.34 1.40
365 366 9.884636 AAAAAGAAAGTTTGGTTAACTGCTATT 57.115 25.926 5.42 0.00 46.34 1.73
396 398 2.598394 GGCAGCTTGTTGCAGGGA 60.598 61.111 11.24 0.00 45.86 4.20
397 399 3.688159 GGGCAGCTTGTTGCAGGG 61.688 66.667 11.24 0.00 45.86 4.45
398 400 4.047059 CGGGCAGCTTGTTGCAGG 62.047 66.667 11.24 0.00 45.86 4.85
402 404 3.149338 TTTGCCGGGCAGCTTGTTG 62.149 57.895 22.59 0.00 40.61 3.33
407 409 2.521708 AAACTTTGCCGGGCAGCT 60.522 55.556 22.59 5.57 40.61 4.24
409 411 2.255252 CGAAACTTTGCCGGGCAG 59.745 61.111 22.59 14.20 40.61 4.85
410 412 2.517402 ACGAAACTTTGCCGGGCA 60.517 55.556 19.77 19.77 36.47 5.36
411 413 2.254350 GACGAAACTTTGCCGGGC 59.746 61.111 13.32 13.32 0.00 6.13
412 414 2.951458 GGACGAAACTTTGCCGGG 59.049 61.111 2.18 0.00 0.00 5.73
520 522 2.976490 GCCTGGGTCATGTGGAGCT 61.976 63.158 0.00 0.00 43.58 4.09
554 556 0.444651 CCTTTTCATTTCCGCGCGTA 59.555 50.000 29.95 11.05 0.00 4.42
727 756 2.416547 AGCATAAACAGCGCAACAGTAG 59.583 45.455 11.47 0.00 37.01 2.57
747 776 2.494918 CTCGGCGGAGGTGGTAAG 59.505 66.667 13.25 0.00 36.61 2.34
823 852 4.082523 ACCTGTCATCCGCCGTGG 62.083 66.667 0.00 0.00 40.09 4.94
865 909 2.584418 CGCCAGACAGGATCAGCG 60.584 66.667 0.00 0.00 43.22 5.18
1543 1616 0.873054 TACGGCGAGAGATCGAATCC 59.127 55.000 16.62 0.00 34.64 3.01
1613 1686 4.116238 GACCAGAATAGTAAGTCAGCTGC 58.884 47.826 9.47 4.26 0.00 5.25
1672 1749 2.547218 GGAAGAGCTTGTGACGGTTACA 60.547 50.000 1.13 1.13 0.00 2.41
1699 1776 2.486982 CACTTTCATCCACTGCCAGAAG 59.513 50.000 0.00 0.00 0.00 2.85
1735 1812 4.993705 TTTGACAGGTGAAATAGGGAGT 57.006 40.909 0.00 0.00 0.00 3.85
1736 1813 6.840780 AATTTTGACAGGTGAAATAGGGAG 57.159 37.500 0.00 0.00 0.00 4.30
1737 1814 6.553100 ACAAATTTTGACAGGTGAAATAGGGA 59.447 34.615 15.81 0.00 0.00 4.20
1739 1816 7.169645 CACACAAATTTTGACAGGTGAAATAGG 59.830 37.037 15.81 0.00 0.00 2.57
1752 1831 2.499289 ACTGGCACCACACAAATTTTGA 59.501 40.909 15.81 0.00 0.00 2.69
1758 1837 0.613292 ACCAACTGGCACCACACAAA 60.613 50.000 0.00 0.00 39.32 2.83
1821 1900 3.822735 TGATCTGACCTTTTCCTGCAAAG 59.177 43.478 0.00 0.00 34.06 2.77
1829 1908 3.128242 CCACTGCATGATCTGACCTTTTC 59.872 47.826 0.00 0.00 0.00 2.29
1964 2043 5.767816 AAAAGGAATATCGGTATTGCCAC 57.232 39.130 15.45 0.00 38.87 5.01
1976 2055 8.514330 TGGTCAGCGTATTTAAAAAGGAATAT 57.486 30.769 0.00 0.00 0.00 1.28
2011 2090 4.220602 GCCCTGCTGGAATTTTCTTTCTTA 59.779 41.667 11.88 0.00 35.39 2.10
2116 2195 2.045131 CAGGAGGGCAAGCAGCTTC 61.045 63.158 4.07 0.23 44.79 3.86
2365 2444 1.580059 TCCCCTTACGCCAAGAATCT 58.420 50.000 0.00 0.00 36.22 2.40
2389 2468 2.100197 TGGTTGACCTCTATCACCTCG 58.900 52.381 1.34 0.00 36.82 4.63
2488 2570 8.892723 CAGCATACATAACATTTCTTACAAGGA 58.107 33.333 0.00 0.00 0.00 3.36
2489 2571 8.892723 TCAGCATACATAACATTTCTTACAAGG 58.107 33.333 0.00 0.00 0.00 3.61
2531 2693 8.806146 AGCTTAATGTGTGTTGAATCCTAAAAT 58.194 29.630 0.00 0.00 0.00 1.82
2534 2696 7.759489 AAGCTTAATGTGTGTTGAATCCTAA 57.241 32.000 0.00 0.00 0.00 2.69
2535 2697 7.446931 TGAAAGCTTAATGTGTGTTGAATCCTA 59.553 33.333 0.00 0.00 0.00 2.94
2545 2707 6.728200 TCAAGTCTTGAAAGCTTAATGTGTG 58.272 36.000 13.00 0.00 36.59 3.82
2546 2708 6.942532 TCAAGTCTTGAAAGCTTAATGTGT 57.057 33.333 13.00 0.00 36.59 3.72
2554 2716 7.992754 AATACAGAATCAAGTCTTGAAAGCT 57.007 32.000 18.93 12.92 43.95 3.74
2685 2847 0.536006 AGTGCACAACTTCCCTCAGC 60.536 55.000 21.04 0.00 34.57 4.26
3337 3499 2.593026 TCACCTCCAACCAATTTCACC 58.407 47.619 0.00 0.00 0.00 4.02
3554 3716 2.897271 TGGTGGGTTAGCAATCATGT 57.103 45.000 0.00 0.00 33.01 3.21
3703 4701 0.179059 TTGACGCAAGCTTCACTCCA 60.179 50.000 0.00 0.00 45.62 3.86
3866 4885 4.824479 TGACAGGCTTGATGATAGTTGA 57.176 40.909 1.40 0.00 0.00 3.18
4073 5094 2.466571 CGTAAACGTACATCGATCCTGC 59.533 50.000 0.00 0.00 42.86 4.85
4118 5145 3.570926 TCTAGAACCTACACAACAGCG 57.429 47.619 0.00 0.00 0.00 5.18
4447 5481 8.318412 TGTATTTCAGCATAGGTAAACTGAGAA 58.682 33.333 0.00 0.00 40.08 2.87
4594 5628 2.864471 GCCAGGCTGCTTGTTGCTT 61.864 57.895 9.56 0.00 43.37 3.91
4624 5658 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4625 5659 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4626 5660 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4627 5661 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4628 5662 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
4629 5663 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
4630 5664 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
4631 5665 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
4632 5666 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
4633 5667 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
4634 5668 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
4635 5669 4.868171 TCATTTCCGAGACAAGTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
4636 5670 6.737254 TTCATTTCCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
4637 5671 6.688813 GCATTCATTTCCGAGACAAGTAATTC 59.311 38.462 0.00 0.00 0.00 2.17
4638 5672 6.150976 TGCATTCATTTCCGAGACAAGTAATT 59.849 34.615 0.00 0.00 0.00 1.40
4639 5673 5.647658 TGCATTCATTTCCGAGACAAGTAAT 59.352 36.000 0.00 0.00 0.00 1.89
4640 5674 5.000591 TGCATTCATTTCCGAGACAAGTAA 58.999 37.500 0.00 0.00 0.00 2.24
4641 5675 4.574892 TGCATTCATTTCCGAGACAAGTA 58.425 39.130 0.00 0.00 0.00 2.24
4642 5676 3.411446 TGCATTCATTTCCGAGACAAGT 58.589 40.909 0.00 0.00 0.00 3.16
4643 5677 4.334759 AGATGCATTCATTTCCGAGACAAG 59.665 41.667 0.00 0.00 31.96 3.16
4644 5678 4.264253 AGATGCATTCATTTCCGAGACAA 58.736 39.130 0.00 0.00 31.96 3.18
4645 5679 3.877559 AGATGCATTCATTTCCGAGACA 58.122 40.909 0.00 0.00 31.96 3.41
4646 5680 5.292765 TCTAGATGCATTCATTTCCGAGAC 58.707 41.667 0.00 0.00 31.96 3.36
4647 5681 5.535753 TCTAGATGCATTCATTTCCGAGA 57.464 39.130 0.00 0.00 31.96 4.04
4648 5682 5.757320 AGTTCTAGATGCATTCATTTCCGAG 59.243 40.000 0.00 0.00 31.96 4.63
4649 5683 5.674525 AGTTCTAGATGCATTCATTTCCGA 58.325 37.500 0.00 0.00 31.96 4.55
4650 5684 5.998454 AGTTCTAGATGCATTCATTTCCG 57.002 39.130 0.00 0.00 31.96 4.30
4677 5711 9.734984 TCGTAGAAATGGATGTATCTAGATGTA 57.265 33.333 15.79 4.44 0.00 2.29
4678 5712 8.516234 GTCGTAGAAATGGATGTATCTAGATGT 58.484 37.037 15.79 1.25 39.69 3.06
4679 5713 8.515414 TGTCGTAGAAATGGATGTATCTAGATG 58.485 37.037 15.79 0.00 39.69 2.90
4680 5714 8.637196 TGTCGTAGAAATGGATGTATCTAGAT 57.363 34.615 10.73 10.73 39.69 1.98
4681 5715 8.459911 TTGTCGTAGAAATGGATGTATCTAGA 57.540 34.615 0.00 0.00 39.69 2.43
4682 5716 8.353684 ACTTGTCGTAGAAATGGATGTATCTAG 58.646 37.037 0.00 0.00 39.69 2.43
4683 5717 8.234136 ACTTGTCGTAGAAATGGATGTATCTA 57.766 34.615 0.00 0.00 39.69 1.98
4684 5718 7.113658 ACTTGTCGTAGAAATGGATGTATCT 57.886 36.000 0.00 0.00 39.69 1.98
4685 5719 8.867112 TTACTTGTCGTAGAAATGGATGTATC 57.133 34.615 0.00 0.00 39.69 2.24
4686 5720 9.832445 AATTACTTGTCGTAGAAATGGATGTAT 57.168 29.630 0.00 0.00 39.69 2.29
4687 5721 9.309516 GAATTACTTGTCGTAGAAATGGATGTA 57.690 33.333 0.00 0.00 39.69 2.29
4688 5722 7.280205 GGAATTACTTGTCGTAGAAATGGATGT 59.720 37.037 0.00 0.00 39.69 3.06
4689 5723 7.516785 CGGAATTACTTGTCGTAGAAATGGATG 60.517 40.741 0.00 0.00 39.69 3.51
4690 5724 6.479001 CGGAATTACTTGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
4691 5725 5.808540 CGGAATTACTTGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
4692 5726 5.808540 TCGGAATTACTTGTCGTAGAAATGG 59.191 40.000 0.00 0.00 39.69 3.16
4693 5727 6.880822 TCGGAATTACTTGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
4694 5728 6.034256 CGTTCGGAATTACTTGTCGTAGAAAT 59.966 38.462 0.00 0.00 39.69 2.17
4695 5729 5.343058 CGTTCGGAATTACTTGTCGTAGAAA 59.657 40.000 0.00 0.00 39.69 2.52
4696 5730 4.853196 CGTTCGGAATTACTTGTCGTAGAA 59.147 41.667 0.00 0.00 39.69 2.10
4697 5731 4.406069 CGTTCGGAATTACTTGTCGTAGA 58.594 43.478 0.00 0.00 0.00 2.59
4698 5732 3.545078 CCGTTCGGAATTACTTGTCGTAG 59.455 47.826 5.19 0.00 0.00 3.51
4699 5733 3.190327 TCCGTTCGGAATTACTTGTCGTA 59.810 43.478 11.66 0.00 0.00 3.43
4700 5734 2.030007 TCCGTTCGGAATTACTTGTCGT 60.030 45.455 11.66 0.00 0.00 4.34
4701 5735 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
4702 5736 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4703 5737 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4704 5738 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4705 5739 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4706 5740 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4707 5741 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4708 5742 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4709 5743 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
4710 5744 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
4711 5745 2.689983 GTTATACTCCCTCCGTTCGGAA 59.310 50.000 14.79 0.00 33.41 4.30
4712 5746 2.092212 AGTTATACTCCCTCCGTTCGGA 60.092 50.000 13.34 13.34 0.00 4.55
4713 5747 2.034305 CAGTTATACTCCCTCCGTTCGG 59.966 54.545 4.74 4.74 0.00 4.30
4714 5748 2.947652 TCAGTTATACTCCCTCCGTTCG 59.052 50.000 0.00 0.00 0.00 3.95
4715 5749 3.698040 TGTCAGTTATACTCCCTCCGTTC 59.302 47.826 0.00 0.00 0.00 3.95
4716 5750 3.700038 CTGTCAGTTATACTCCCTCCGTT 59.300 47.826 0.00 0.00 0.00 4.44
4717 5751 3.288964 CTGTCAGTTATACTCCCTCCGT 58.711 50.000 0.00 0.00 0.00 4.69
4718 5752 3.066900 CACTGTCAGTTATACTCCCTCCG 59.933 52.174 1.67 0.00 0.00 4.63
4719 5753 3.181474 GCACTGTCAGTTATACTCCCTCC 60.181 52.174 1.67 0.00 0.00 4.30
4720 5754 3.447586 TGCACTGTCAGTTATACTCCCTC 59.552 47.826 1.67 0.00 0.00 4.30
4721 5755 3.195825 GTGCACTGTCAGTTATACTCCCT 59.804 47.826 10.32 0.00 0.00 4.20
4722 5756 3.056107 TGTGCACTGTCAGTTATACTCCC 60.056 47.826 19.41 0.00 0.00 4.30
4723 5757 4.177026 CTGTGCACTGTCAGTTATACTCC 58.823 47.826 19.41 0.00 0.00 3.85
4724 5758 4.177026 CCTGTGCACTGTCAGTTATACTC 58.823 47.826 19.41 0.00 0.00 2.59
4725 5759 3.578716 ACCTGTGCACTGTCAGTTATACT 59.421 43.478 19.41 0.00 0.00 2.12
4726 5760 3.926616 ACCTGTGCACTGTCAGTTATAC 58.073 45.455 19.41 3.63 0.00 1.47
4751 5785 2.134201 TATCAGTAATGCAGCGGTCG 57.866 50.000 0.00 0.00 0.00 4.79
4770 5804 7.123847 ACGTTTGGACTACAGAAGAAGGTATAT 59.876 37.037 0.00 0.00 0.00 0.86
4772 5806 5.245526 ACGTTTGGACTACAGAAGAAGGTAT 59.754 40.000 0.00 0.00 0.00 2.73
5216 7632 3.027412 TCAGATCTAAGGCAGGTCACTC 58.973 50.000 0.00 0.00 36.79 3.51
5217 7633 2.763448 GTCAGATCTAAGGCAGGTCACT 59.237 50.000 0.00 0.00 36.79 3.41
5218 7634 2.159028 GGTCAGATCTAAGGCAGGTCAC 60.159 54.545 0.00 0.00 36.79 3.67
5219 7635 2.111384 GGTCAGATCTAAGGCAGGTCA 58.889 52.381 0.00 0.00 36.79 4.02
5379 7796 1.851021 TTGCCTCATCGGTGTTTGCG 61.851 55.000 0.00 0.00 34.25 4.85
5442 7859 1.000884 TCACAACAAACACGTCGTCC 58.999 50.000 0.00 0.00 0.00 4.79
5575 7992 1.588674 TATGCTTTGCCCGGTTATCG 58.411 50.000 0.00 0.00 38.88 2.92
5598 8016 6.209391 TGAGATGAGATCACAACTGTACTTCA 59.791 38.462 7.63 0.00 0.00 3.02
5599 8017 6.529829 GTGAGATGAGATCACAACTGTACTTC 59.470 42.308 7.63 0.00 45.18 3.01
5626 8044 2.636647 TGTTCAGTGCCAATGTCTCA 57.363 45.000 0.00 0.00 0.00 3.27
5642 8060 0.391597 ACGACAGGAACCGACATGTT 59.608 50.000 0.00 0.00 34.97 2.71
5668 8086 1.197721 CGTTGAGGTGAACTGAATGCC 59.802 52.381 0.00 0.00 0.00 4.40
5799 8217 8.896744 CATATCATGGATTCAATAATTAGCCGT 58.103 33.333 0.00 0.00 0.00 5.68
6226 8687 1.821332 GCTACACTGCATGCCCCTC 60.821 63.158 16.68 0.00 0.00 4.30
6227 8688 2.273449 GCTACACTGCATGCCCCT 59.727 61.111 16.68 0.00 0.00 4.79
6228 8689 2.830370 GGCTACACTGCATGCCCC 60.830 66.667 16.68 0.30 39.49 5.80
6229 8690 2.117156 CAGGCTACACTGCATGCCC 61.117 63.158 16.68 7.03 45.94 5.36
6230 8691 1.377725 ACAGGCTACACTGCATGCC 60.378 57.895 16.68 0.00 46.98 4.40
6231 8692 0.674581 TCACAGGCTACACTGCATGC 60.675 55.000 11.82 11.82 46.98 4.06
6233 8694 1.339438 CCTTCACAGGCTACACTGCAT 60.339 52.381 0.00 0.00 42.21 3.96
6234 8695 0.035317 CCTTCACAGGCTACACTGCA 59.965 55.000 0.00 0.00 42.21 4.41
6235 8696 2.846371 CCTTCACAGGCTACACTGC 58.154 57.895 0.00 0.00 42.21 4.40
6244 8705 1.856539 ATCACAGGGGCCTTCACAGG 61.857 60.000 0.84 0.00 44.28 4.00
6245 8706 0.679002 CATCACAGGGGCCTTCACAG 60.679 60.000 0.84 0.00 0.00 3.66
6246 8707 1.379916 CATCACAGGGGCCTTCACA 59.620 57.895 0.84 0.00 0.00 3.58
6247 8708 2.048603 GCATCACAGGGGCCTTCAC 61.049 63.158 0.84 0.00 0.00 3.18
6248 8709 0.913934 TAGCATCACAGGGGCCTTCA 60.914 55.000 0.84 0.00 0.00 3.02
6249 8710 0.475906 ATAGCATCACAGGGGCCTTC 59.524 55.000 0.84 0.00 0.00 3.46
6250 8711 1.819753 TATAGCATCACAGGGGCCTT 58.180 50.000 0.84 0.00 0.00 4.35
6251 8712 1.421646 GTTATAGCATCACAGGGGCCT 59.578 52.381 0.84 0.00 0.00 5.19
6252 8713 1.545651 GGTTATAGCATCACAGGGGCC 60.546 57.143 0.00 0.00 0.00 5.80
6253 8714 1.142870 TGGTTATAGCATCACAGGGGC 59.857 52.381 0.00 0.00 0.00 5.80
6254 8715 3.795688 ATGGTTATAGCATCACAGGGG 57.204 47.619 0.00 0.00 28.87 4.79
6255 8716 5.489792 ACTATGGTTATAGCATCACAGGG 57.510 43.478 0.00 0.00 39.96 4.45
6256 8717 6.291377 ACAACTATGGTTATAGCATCACAGG 58.709 40.000 0.00 0.00 39.96 4.00
6257 8718 8.144478 AGTACAACTATGGTTATAGCATCACAG 58.856 37.037 0.00 0.00 39.96 3.66
6258 8719 8.018537 AGTACAACTATGGTTATAGCATCACA 57.981 34.615 0.00 0.00 39.96 3.58
6259 8720 8.765219 CAAGTACAACTATGGTTATAGCATCAC 58.235 37.037 0.00 0.00 39.96 3.06
6260 8721 8.482943 ACAAGTACAACTATGGTTATAGCATCA 58.517 33.333 0.00 0.00 39.96 3.07
6261 8722 8.765219 CACAAGTACAACTATGGTTATAGCATC 58.235 37.037 0.00 0.00 39.96 3.91
6262 8723 7.226720 GCACAAGTACAACTATGGTTATAGCAT 59.773 37.037 0.00 0.00 39.96 3.79
6263 8724 6.537301 GCACAAGTACAACTATGGTTATAGCA 59.463 38.462 0.00 0.00 39.96 3.49
6264 8725 6.537301 TGCACAAGTACAACTATGGTTATAGC 59.463 38.462 0.00 0.00 39.96 2.97
6265 8726 7.547722 TGTGCACAAGTACAACTATGGTTATAG 59.452 37.037 19.28 0.00 37.42 1.31
6266 8727 7.387643 TGTGCACAAGTACAACTATGGTTATA 58.612 34.615 19.28 0.00 37.42 0.98
6267 8728 6.234920 TGTGCACAAGTACAACTATGGTTAT 58.765 36.000 19.28 0.00 37.42 1.89
6268 8729 5.612351 TGTGCACAAGTACAACTATGGTTA 58.388 37.500 19.28 0.00 37.42 2.85
6269 8730 4.456535 TGTGCACAAGTACAACTATGGTT 58.543 39.130 19.28 0.00 37.42 3.67
6270 8731 4.065088 CTGTGCACAAGTACAACTATGGT 58.935 43.478 21.98 0.00 39.91 3.55
6320 8781 9.691362 ATTTGCAACAAAATTTAACTAGTCGAT 57.309 25.926 0.00 0.00 0.00 3.59
6322 8783 8.147172 CGATTTGCAACAAAATTTAACTAGTCG 58.853 33.333 0.00 0.00 29.89 4.18
6327 8788 6.478344 TGCTCGATTTGCAACAAAATTTAACT 59.522 30.769 0.00 0.00 37.51 2.24
6333 8794 2.733026 GCTGCTCGATTTGCAACAAAAT 59.267 40.909 0.00 0.00 40.13 1.82
6337 8798 0.667453 TTGCTGCTCGATTTGCAACA 59.333 45.000 0.00 6.16 39.98 3.33
6366 8827 2.609244 GCTTCTATCACGGAGATGCTCC 60.609 54.545 3.36 3.36 46.44 4.70
6380 8841 3.422796 ACCTCCGACGATATGCTTCTAT 58.577 45.455 0.00 0.00 0.00 1.98
6424 8885 1.589716 GCATCACAGTTCACAGGGGC 61.590 60.000 0.00 0.00 0.00 5.80
6426 8887 1.162698 CAGCATCACAGTTCACAGGG 58.837 55.000 0.00 0.00 0.00 4.45
6427 8888 1.888215 ACAGCATCACAGTTCACAGG 58.112 50.000 0.00 0.00 0.00 4.00
6428 8889 3.187227 GGTTACAGCATCACAGTTCACAG 59.813 47.826 0.00 0.00 0.00 3.66
6429 8890 3.138304 GGTTACAGCATCACAGTTCACA 58.862 45.455 0.00 0.00 0.00 3.58
6431 8892 3.483808 TGGTTACAGCATCACAGTTCA 57.516 42.857 0.00 0.00 0.00 3.18
6434 8895 3.198635 AGCTATGGTTACAGCATCACAGT 59.801 43.478 0.00 0.00 40.36 3.55
6435 8896 3.558829 CAGCTATGGTTACAGCATCACAG 59.441 47.826 0.00 0.00 40.36 3.66
6437 8898 3.535561 ACAGCTATGGTTACAGCATCAC 58.464 45.455 0.00 0.00 40.36 3.06
6438 8899 3.912496 ACAGCTATGGTTACAGCATCA 57.088 42.857 0.00 0.00 40.36 3.07
6439 8900 3.743396 GCTACAGCTATGGTTACAGCATC 59.257 47.826 0.00 0.00 40.36 3.91
6441 8902 3.179443 GCTACAGCTATGGTTACAGCA 57.821 47.619 0.00 0.00 40.36 4.41
6454 8915 0.108329 TCCTAAACCGCAGCTACAGC 60.108 55.000 0.00 0.00 42.49 4.40
6455 8916 2.205074 CATCCTAAACCGCAGCTACAG 58.795 52.381 0.00 0.00 0.00 2.74
6456 8917 1.134521 CCATCCTAAACCGCAGCTACA 60.135 52.381 0.00 0.00 0.00 2.74
6458 8919 0.468226 CCCATCCTAAACCGCAGCTA 59.532 55.000 0.00 0.00 0.00 3.32
6460 8921 0.679960 AACCCATCCTAAACCGCAGC 60.680 55.000 0.00 0.00 0.00 5.25
6461 8922 1.094785 CAACCCATCCTAAACCGCAG 58.905 55.000 0.00 0.00 0.00 5.18
6463 8924 0.323087 ACCAACCCATCCTAAACCGC 60.323 55.000 0.00 0.00 0.00 5.68
6514 9110 2.363683 CCTCTTCAGAATGTCCCTTGC 58.636 52.381 0.00 0.00 37.40 4.01
6568 9164 0.317770 AACTTGCGTTGTGAATGCCG 60.318 50.000 0.00 0.00 42.76 5.69
6629 9229 2.703536 TCAGTGCTTGAAGTGGTCCTTA 59.296 45.455 0.00 0.00 32.03 2.69
6665 9265 8.816640 AAACTGGAAATTTGTGCTATTTAGTG 57.183 30.769 0.00 0.00 0.00 2.74
6669 9269 7.877612 CCCTAAAACTGGAAATTTGTGCTATTT 59.122 33.333 0.00 0.00 0.00 1.40
6670 9270 7.386059 CCCTAAAACTGGAAATTTGTGCTATT 58.614 34.615 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.