Multiple sequence alignment - TraesCS3B01G410500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G410500 chr3B 100.000 9524 0 0 1 9524 647253284 647243761 0.000000e+00 17588.0
1 TraesCS3B01G410500 chr3B 99.623 5035 19 0 3146 8180 745467632 745472666 0.000000e+00 9193.0
2 TraesCS3B01G410500 chr3B 99.563 5032 22 0 3149 8180 737068185 737063154 0.000000e+00 9171.0
3 TraesCS3B01G410500 chr3B 99.265 5034 37 0 3148 8181 592652826 592657859 0.000000e+00 9092.0
4 TraesCS3B01G410500 chr3B 96.329 681 25 0 1 681 202525805 202525125 0.000000e+00 1120.0
5 TraesCS3B01G410500 chr3B 96.997 333 10 0 9192 9524 647238996 647238664 2.320000e-155 560.0
6 TraesCS3B01G410500 chr3B 91.954 174 14 0 8180 8353 412912941 412912768 2.660000e-60 244.0
7 TraesCS3B01G410500 chr3B 82.353 221 33 4 9251 9467 116211272 116211054 4.540000e-43 187.0
8 TraesCS3B01G410500 chr3B 80.543 221 39 4 9251 9467 116197439 116197219 5.920000e-37 167.0
9 TraesCS3B01G410500 chr3B 79.630 108 17 4 9251 9354 520613882 520613988 1.330000e-08 73.1
10 TraesCS3B01G410500 chr7A 99.583 5032 21 0 3149 8180 730476583 730471552 0.000000e+00 9177.0
11 TraesCS3B01G410500 chr7A 99.245 5035 38 0 3146 8180 186517177 186522211 0.000000e+00 9088.0
12 TraesCS3B01G410500 chr7A 99.107 5039 44 1 3148 8185 43517620 43522658 0.000000e+00 9055.0
13 TraesCS3B01G410500 chr7A 82.828 99 16 1 1825 1922 293084429 293084527 4.740000e-13 87.9
14 TraesCS3B01G410500 chr2B 99.464 5035 27 0 3149 8183 67166863 67161829 0.000000e+00 9149.0
15 TraesCS3B01G410500 chr5A 99.324 5032 34 0 3149 8180 609263844 609268875 0.000000e+00 9105.0
16 TraesCS3B01G410500 chrUn 99.146 5033 43 0 3149 8181 128494188 128499220 0.000000e+00 9057.0
17 TraesCS3B01G410500 chr3D 97.558 2252 42 6 906 3148 484628977 484626730 0.000000e+00 3842.0
18 TraesCS3B01G410500 chr3D 95.495 1021 34 7 8180 9191 484626735 484625718 0.000000e+00 1620.0
19 TraesCS3B01G410500 chr3D 91.736 242 8 3 676 909 484629294 484629057 9.220000e-85 326.0
20 TraesCS3B01G410500 chr3D 82.383 193 23 7 1244 1426 63247326 63247135 3.560000e-34 158.0
21 TraesCS3B01G410500 chr3A 93.462 2478 112 13 676 3148 627704431 627701999 0.000000e+00 3633.0
22 TraesCS3B01G410500 chr3A 88.732 852 35 12 8180 9003 627702004 627701186 0.000000e+00 985.0
23 TraesCS3B01G410500 chr4B 98.088 680 11 1 1 678 66114878 66115557 0.000000e+00 1182.0
24 TraesCS3B01G410500 chr4B 97.578 578 14 0 104 681 471771777 471771200 0.000000e+00 990.0
25 TraesCS3B01G410500 chr5B 93.462 673 42 2 11 681 262526602 262525930 0.000000e+00 998.0
26 TraesCS3B01G410500 chr7B 93.215 678 45 1 2 678 125225932 125226609 0.000000e+00 996.0
27 TraesCS3B01G410500 chr7B 93.443 671 43 1 11 681 453430731 453430062 0.000000e+00 994.0
28 TraesCS3B01G410500 chr7B 93.068 678 46 1 2 678 125249767 125250444 0.000000e+00 990.0
29 TraesCS3B01G410500 chr7B 92.920 678 47 1 2 678 125285822 125286499 0.000000e+00 985.0
30 TraesCS3B01G410500 chr7B 92.910 677 46 2 2 678 125319703 125320377 0.000000e+00 983.0
31 TraesCS3B01G410500 chr5D 89.869 306 24 6 2809 3108 98769188 98769492 4.170000e-103 387.0
32 TraesCS3B01G410500 chr5D 91.566 166 12 1 8180 8345 98769517 98769680 2.680000e-55 228.0
33 TraesCS3B01G410500 chr6B 87.586 145 18 0 9375 9519 695106854 695106998 1.640000e-37 169.0
34 TraesCS3B01G410500 chr6B 87.143 140 18 0 9385 9524 695114743 695114882 9.900000e-35 159.0
35 TraesCS3B01G410500 chr1D 78.974 195 29 8 1242 1426 362697264 362697072 1.300000e-23 122.0
36 TraesCS3B01G410500 chr1D 81.818 99 17 1 1825 1922 56930542 56930640 2.200000e-11 82.4
37 TraesCS3B01G410500 chr6A 78.616 159 25 5 1277 1426 493150138 493150296 7.870000e-16 97.1
38 TraesCS3B01G410500 chr6A 82.828 99 16 1 1825 1922 188699854 188699756 4.740000e-13 87.9
39 TraesCS3B01G410500 chr2D 84.043 94 15 0 1829 1922 249137064 249137157 3.660000e-14 91.6
40 TraesCS3B01G410500 chr4D 74.877 203 43 6 1722 1923 86014191 86013996 1.700000e-12 86.1
41 TraesCS3B01G410500 chr4D 74.877 203 42 7 1722 1922 97518505 97518310 6.130000e-12 84.2
42 TraesCS3B01G410500 chr1A 82.000 100 17 1 1825 1923 108378798 108378699 6.130000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G410500 chr3B 647243761 647253284 9523 True 17588.000000 17588 100.000000 1 9524 1 chr3B.!!$R6 9523
1 TraesCS3B01G410500 chr3B 745467632 745472666 5034 False 9193.000000 9193 99.623000 3146 8180 1 chr3B.!!$F3 5034
2 TraesCS3B01G410500 chr3B 737063154 737068185 5031 True 9171.000000 9171 99.563000 3149 8180 1 chr3B.!!$R7 5031
3 TraesCS3B01G410500 chr3B 592652826 592657859 5033 False 9092.000000 9092 99.265000 3148 8181 1 chr3B.!!$F2 5033
4 TraesCS3B01G410500 chr3B 202525125 202525805 680 True 1120.000000 1120 96.329000 1 681 1 chr3B.!!$R3 680
5 TraesCS3B01G410500 chr7A 730471552 730476583 5031 True 9177.000000 9177 99.583000 3149 8180 1 chr7A.!!$R1 5031
6 TraesCS3B01G410500 chr7A 186517177 186522211 5034 False 9088.000000 9088 99.245000 3146 8180 1 chr7A.!!$F2 5034
7 TraesCS3B01G410500 chr7A 43517620 43522658 5038 False 9055.000000 9055 99.107000 3148 8185 1 chr7A.!!$F1 5037
8 TraesCS3B01G410500 chr2B 67161829 67166863 5034 True 9149.000000 9149 99.464000 3149 8183 1 chr2B.!!$R1 5034
9 TraesCS3B01G410500 chr5A 609263844 609268875 5031 False 9105.000000 9105 99.324000 3149 8180 1 chr5A.!!$F1 5031
10 TraesCS3B01G410500 chrUn 128494188 128499220 5032 False 9057.000000 9057 99.146000 3149 8181 1 chrUn.!!$F1 5032
11 TraesCS3B01G410500 chr3D 484625718 484629294 3576 True 1929.333333 3842 94.929667 676 9191 3 chr3D.!!$R2 8515
12 TraesCS3B01G410500 chr3A 627701186 627704431 3245 True 2309.000000 3633 91.097000 676 9003 2 chr3A.!!$R1 8327
13 TraesCS3B01G410500 chr4B 66114878 66115557 679 False 1182.000000 1182 98.088000 1 678 1 chr4B.!!$F1 677
14 TraesCS3B01G410500 chr4B 471771200 471771777 577 True 990.000000 990 97.578000 104 681 1 chr4B.!!$R1 577
15 TraesCS3B01G410500 chr5B 262525930 262526602 672 True 998.000000 998 93.462000 11 681 1 chr5B.!!$R1 670
16 TraesCS3B01G410500 chr7B 125225932 125226609 677 False 996.000000 996 93.215000 2 678 1 chr7B.!!$F1 676
17 TraesCS3B01G410500 chr7B 453430062 453430731 669 True 994.000000 994 93.443000 11 681 1 chr7B.!!$R1 670
18 TraesCS3B01G410500 chr7B 125249767 125250444 677 False 990.000000 990 93.068000 2 678 1 chr7B.!!$F2 676
19 TraesCS3B01G410500 chr7B 125285822 125286499 677 False 985.000000 985 92.920000 2 678 1 chr7B.!!$F3 676
20 TraesCS3B01G410500 chr7B 125319703 125320377 674 False 983.000000 983 92.910000 2 678 1 chr7B.!!$F4 676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
640 646 0.253327 CCCCCTAGCACAGAAACCTC 59.747 60.000 0.00 0.00 0.00 3.85 F
663 669 0.951558 TGTTCCAGAAAAGCGCCTTC 59.048 50.000 2.29 7.87 0.00 3.46 F
1904 2014 0.246635 AAGGGGAGTTGATCGTGTCG 59.753 55.000 0.00 0.00 0.00 4.35 F
2653 2765 1.676967 CTGCTGGCTTGGAAGGACC 60.677 63.158 0.00 0.00 39.54 4.46 F
3144 3264 4.414337 AGCTTTCAAGTGTGAAGAGAGT 57.586 40.909 0.00 0.00 44.49 3.24 F
3794 3914 0.319083 TCAAGACGGTATGCCACGTT 59.681 50.000 0.00 0.00 44.24 3.99 F
4728 4867 0.820482 CGCCTTCATGCCCATCATCA 60.820 55.000 0.00 0.00 31.79 3.07 F
5014 5153 0.766674 ACCTGCCTTGTACTCCACCA 60.767 55.000 0.00 0.00 0.00 4.17 F
5129 5268 2.690173 TTTACCACAAATTGACGCCG 57.310 45.000 0.00 0.00 0.00 6.46 F
8349 8573 8.691661 ATATTTCGAAGGGTACAATATTTGCT 57.308 30.769 0.00 0.00 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1712 1822 1.227527 CTTGTGCCACCGTGTCTCA 60.228 57.895 0.00 0.0 0.00 3.27 R
2594 2706 1.451504 CTGTTGGTCCTGCACCTCA 59.548 57.895 0.00 0.0 46.98 3.86 R
3145 3265 0.251916 CACCGAGGCCCTTGACATTA 59.748 55.000 0.00 0.0 0.00 1.90 R
3794 3914 3.189080 CCGCATTTCAGAAGTGATCAACA 59.811 43.478 9.78 0.0 30.85 3.33 R
4728 4867 0.251354 AGATTCTCAGTGCCGTGCAT 59.749 50.000 1.90 0.0 41.91 3.96 R
5014 5153 5.186198 CAAACTCCTGGGATTCGACTTTAT 58.814 41.667 0.00 0.0 0.00 1.40 R
7899 8123 3.881019 TAGCGCTCCTATCCCCCGG 62.881 68.421 16.34 0.0 0.00 5.73 R
8468 8694 4.021368 GCTGAGTAGTTGAAGTTCCCTGTA 60.021 45.833 0.00 0.0 0.00 2.74 R
8493 8719 2.226962 AAGGCCATTGCACATCTTCT 57.773 45.000 5.01 0.0 40.13 2.85 R
9405 9662 0.035458 GGTCCAGAGTGGTCCAAGTG 59.965 60.000 0.00 0.0 43.84 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
310 316 3.006217 AGAAAGCTCATCCAAAAAGGCAC 59.994 43.478 0.00 0.00 37.29 5.01
559 565 6.548993 AGCAGAAAAGGAAGATTTGAAAGTCT 59.451 34.615 0.00 0.00 0.00 3.24
560 566 6.860539 GCAGAAAAGGAAGATTTGAAAGTCTC 59.139 38.462 0.00 0.00 0.00 3.36
561 567 7.074502 CAGAAAAGGAAGATTTGAAAGTCTCG 58.925 38.462 0.00 0.00 0.00 4.04
562 568 6.992715 AGAAAAGGAAGATTTGAAAGTCTCGA 59.007 34.615 0.00 0.00 0.00 4.04
563 569 6.546972 AAAGGAAGATTTGAAAGTCTCGAC 57.453 37.500 0.00 0.00 0.00 4.20
564 570 5.215252 AGGAAGATTTGAAAGTCTCGACA 57.785 39.130 0.00 0.00 0.00 4.35
565 571 5.611374 AGGAAGATTTGAAAGTCTCGACAA 58.389 37.500 0.00 0.00 0.00 3.18
566 572 5.698545 AGGAAGATTTGAAAGTCTCGACAAG 59.301 40.000 0.00 0.00 0.00 3.16
567 573 5.106908 GGAAGATTTGAAAGTCTCGACAAGG 60.107 44.000 0.00 0.00 0.00 3.61
568 574 3.748568 AGATTTGAAAGTCTCGACAAGGC 59.251 43.478 0.00 0.00 0.00 4.35
569 575 1.878953 TTGAAAGTCTCGACAAGGCC 58.121 50.000 0.00 0.00 0.00 5.19
570 576 0.756294 TGAAAGTCTCGACAAGGCCA 59.244 50.000 5.01 0.00 0.00 5.36
571 577 1.140052 TGAAAGTCTCGACAAGGCCAA 59.860 47.619 5.01 0.00 0.00 4.52
572 578 2.224523 TGAAAGTCTCGACAAGGCCAAT 60.225 45.455 5.01 0.00 0.00 3.16
573 579 3.007506 TGAAAGTCTCGACAAGGCCAATA 59.992 43.478 5.01 0.00 0.00 1.90
574 580 3.695830 AAGTCTCGACAAGGCCAATAA 57.304 42.857 5.01 0.00 0.00 1.40
575 581 3.695830 AGTCTCGACAAGGCCAATAAA 57.304 42.857 5.01 0.00 0.00 1.40
576 582 4.015872 AGTCTCGACAAGGCCAATAAAA 57.984 40.909 5.01 0.00 0.00 1.52
577 583 4.589908 AGTCTCGACAAGGCCAATAAAAT 58.410 39.130 5.01 0.00 0.00 1.82
578 584 4.636206 AGTCTCGACAAGGCCAATAAAATC 59.364 41.667 5.01 0.00 0.00 2.17
579 585 3.945285 TCTCGACAAGGCCAATAAAATCC 59.055 43.478 5.01 0.00 0.00 3.01
580 586 3.691575 TCGACAAGGCCAATAAAATCCA 58.308 40.909 5.01 0.00 0.00 3.41
581 587 3.442273 TCGACAAGGCCAATAAAATCCAC 59.558 43.478 5.01 0.00 0.00 4.02
582 588 3.192422 CGACAAGGCCAATAAAATCCACA 59.808 43.478 5.01 0.00 0.00 4.17
583 589 4.142182 CGACAAGGCCAATAAAATCCACAT 60.142 41.667 5.01 0.00 0.00 3.21
584 590 5.624281 CGACAAGGCCAATAAAATCCACATT 60.624 40.000 5.01 0.00 0.00 2.71
585 591 5.733676 ACAAGGCCAATAAAATCCACATTC 58.266 37.500 5.01 0.00 0.00 2.67
586 592 5.484998 ACAAGGCCAATAAAATCCACATTCT 59.515 36.000 5.01 0.00 0.00 2.40
587 593 5.859205 AGGCCAATAAAATCCACATTCTC 57.141 39.130 5.01 0.00 0.00 2.87
588 594 5.271598 AGGCCAATAAAATCCACATTCTCA 58.728 37.500 5.01 0.00 0.00 3.27
589 595 5.361857 AGGCCAATAAAATCCACATTCTCAG 59.638 40.000 5.01 0.00 0.00 3.35
590 596 5.360714 GGCCAATAAAATCCACATTCTCAGA 59.639 40.000 0.00 0.00 0.00 3.27
591 597 6.041296 GGCCAATAAAATCCACATTCTCAGAT 59.959 38.462 0.00 0.00 0.00 2.90
592 598 7.144000 GCCAATAAAATCCACATTCTCAGATC 58.856 38.462 0.00 0.00 0.00 2.75
593 599 7.358066 CCAATAAAATCCACATTCTCAGATCG 58.642 38.462 0.00 0.00 0.00 3.69
594 600 7.227314 CCAATAAAATCCACATTCTCAGATCGA 59.773 37.037 0.00 0.00 0.00 3.59
595 601 8.615211 CAATAAAATCCACATTCTCAGATCGAA 58.385 33.333 0.00 0.00 0.00 3.71
596 602 6.428385 AAAATCCACATTCTCAGATCGAAC 57.572 37.500 0.00 0.00 0.00 3.95
597 603 5.350504 AATCCACATTCTCAGATCGAACT 57.649 39.130 0.00 0.00 0.00 3.01
598 604 6.471233 AATCCACATTCTCAGATCGAACTA 57.529 37.500 0.00 0.00 0.00 2.24
599 605 5.506686 TCCACATTCTCAGATCGAACTAG 57.493 43.478 0.00 0.00 0.00 2.57
600 606 4.339530 TCCACATTCTCAGATCGAACTAGG 59.660 45.833 0.00 0.00 0.00 3.02
601 607 4.098654 CCACATTCTCAGATCGAACTAGGT 59.901 45.833 0.00 0.00 0.00 3.08
602 608 5.277825 CACATTCTCAGATCGAACTAGGTC 58.722 45.833 0.00 0.00 0.00 3.85
603 609 4.339814 ACATTCTCAGATCGAACTAGGTCC 59.660 45.833 1.16 0.00 0.00 4.46
604 610 3.935818 TCTCAGATCGAACTAGGTCCT 57.064 47.619 1.16 0.00 0.00 3.85
605 611 4.237976 TCTCAGATCGAACTAGGTCCTT 57.762 45.455 1.16 0.00 0.00 3.36
606 612 5.369409 TCTCAGATCGAACTAGGTCCTTA 57.631 43.478 1.16 0.00 0.00 2.69
607 613 5.752650 TCTCAGATCGAACTAGGTCCTTAA 58.247 41.667 1.16 0.00 0.00 1.85
608 614 5.823570 TCTCAGATCGAACTAGGTCCTTAAG 59.176 44.000 1.16 0.00 0.00 1.85
609 615 5.507637 TCAGATCGAACTAGGTCCTTAAGT 58.492 41.667 1.16 0.00 0.00 2.24
610 616 5.950549 TCAGATCGAACTAGGTCCTTAAGTT 59.049 40.000 6.74 6.74 36.20 2.66
611 617 6.037098 CAGATCGAACTAGGTCCTTAAGTTG 58.963 44.000 11.16 5.20 33.72 3.16
612 618 4.796038 TCGAACTAGGTCCTTAAGTTGG 57.204 45.455 11.16 10.14 33.72 3.77
613 619 4.154942 TCGAACTAGGTCCTTAAGTTGGT 58.845 43.478 11.16 0.00 33.72 3.67
614 620 4.219288 TCGAACTAGGTCCTTAAGTTGGTC 59.781 45.833 11.16 0.00 33.72 4.02
615 621 4.220163 CGAACTAGGTCCTTAAGTTGGTCT 59.780 45.833 11.16 0.00 33.72 3.85
616 622 5.621781 CGAACTAGGTCCTTAAGTTGGTCTC 60.622 48.000 11.16 0.00 33.72 3.36
617 623 5.013258 ACTAGGTCCTTAAGTTGGTCTCT 57.987 43.478 0.00 0.00 0.00 3.10
618 624 4.773149 ACTAGGTCCTTAAGTTGGTCTCTG 59.227 45.833 0.00 0.00 0.00 3.35
619 625 2.303311 AGGTCCTTAAGTTGGTCTCTGC 59.697 50.000 0.97 0.00 0.00 4.26
620 626 2.338500 GTCCTTAAGTTGGTCTCTGCG 58.662 52.381 0.97 0.00 0.00 5.18
621 627 1.079503 CCTTAAGTTGGTCTCTGCGC 58.920 55.000 0.00 0.00 0.00 6.09
622 628 1.079503 CTTAAGTTGGTCTCTGCGCC 58.920 55.000 4.18 0.00 0.00 6.53
623 629 0.321298 TTAAGTTGGTCTCTGCGCCC 60.321 55.000 4.18 0.00 0.00 6.13
624 630 2.180159 TAAGTTGGTCTCTGCGCCCC 62.180 60.000 4.18 0.00 0.00 5.80
627 633 3.916438 TTGGTCTCTGCGCCCCCTA 62.916 63.158 4.18 0.00 0.00 3.53
628 634 3.541713 GGTCTCTGCGCCCCCTAG 61.542 72.222 4.18 0.00 0.00 3.02
629 635 4.228567 GTCTCTGCGCCCCCTAGC 62.229 72.222 4.18 0.00 0.00 3.42
630 636 4.777854 TCTCTGCGCCCCCTAGCA 62.778 66.667 4.18 0.00 41.55 3.49
631 637 4.537433 CTCTGCGCCCCCTAGCAC 62.537 72.222 4.18 0.00 38.59 4.40
633 639 4.845580 CTGCGCCCCCTAGCACAG 62.846 72.222 4.18 0.00 38.59 3.66
635 641 4.096003 GCGCCCCCTAGCACAGAA 62.096 66.667 0.00 0.00 0.00 3.02
636 642 2.668632 CGCCCCCTAGCACAGAAA 59.331 61.111 0.00 0.00 0.00 2.52
637 643 1.745489 CGCCCCCTAGCACAGAAAC 60.745 63.158 0.00 0.00 0.00 2.78
638 644 1.378646 GCCCCCTAGCACAGAAACC 60.379 63.158 0.00 0.00 0.00 3.27
639 645 1.853250 GCCCCCTAGCACAGAAACCT 61.853 60.000 0.00 0.00 0.00 3.50
640 646 0.253327 CCCCCTAGCACAGAAACCTC 59.747 60.000 0.00 0.00 0.00 3.85
641 647 1.280457 CCCCTAGCACAGAAACCTCT 58.720 55.000 0.00 0.00 0.00 3.69
642 648 2.467880 CCCCTAGCACAGAAACCTCTA 58.532 52.381 0.00 0.00 0.00 2.43
643 649 2.838202 CCCCTAGCACAGAAACCTCTAA 59.162 50.000 0.00 0.00 0.00 2.10
644 650 3.456277 CCCCTAGCACAGAAACCTCTAAT 59.544 47.826 0.00 0.00 0.00 1.73
645 651 4.446371 CCCTAGCACAGAAACCTCTAATG 58.554 47.826 0.00 0.00 0.00 1.90
646 652 4.080863 CCCTAGCACAGAAACCTCTAATGT 60.081 45.833 0.00 0.00 0.00 2.71
647 653 5.491982 CCTAGCACAGAAACCTCTAATGTT 58.508 41.667 0.00 0.00 0.00 2.71
648 654 5.582665 CCTAGCACAGAAACCTCTAATGTTC 59.417 44.000 0.00 0.00 0.00 3.18
649 655 4.327680 AGCACAGAAACCTCTAATGTTCC 58.672 43.478 0.00 0.00 0.00 3.62
650 656 4.072131 GCACAGAAACCTCTAATGTTCCA 58.928 43.478 0.00 0.00 0.00 3.53
651 657 4.154918 GCACAGAAACCTCTAATGTTCCAG 59.845 45.833 0.00 0.00 0.00 3.86
652 658 5.551233 CACAGAAACCTCTAATGTTCCAGA 58.449 41.667 0.00 0.00 0.00 3.86
653 659 5.997746 CACAGAAACCTCTAATGTTCCAGAA 59.002 40.000 0.00 0.00 0.00 3.02
654 660 6.486657 CACAGAAACCTCTAATGTTCCAGAAA 59.513 38.462 0.00 0.00 0.00 2.52
655 661 7.013274 CACAGAAACCTCTAATGTTCCAGAAAA 59.987 37.037 0.00 0.00 0.00 2.29
656 662 7.229506 ACAGAAACCTCTAATGTTCCAGAAAAG 59.770 37.037 0.00 0.00 0.00 2.27
657 663 5.966742 AACCTCTAATGTTCCAGAAAAGC 57.033 39.130 0.00 0.00 0.00 3.51
658 664 4.003648 ACCTCTAATGTTCCAGAAAAGCG 58.996 43.478 0.00 0.00 0.00 4.68
659 665 3.181506 CCTCTAATGTTCCAGAAAAGCGC 60.182 47.826 0.00 0.00 0.00 5.92
660 666 2.747446 TCTAATGTTCCAGAAAAGCGCC 59.253 45.455 2.29 0.00 0.00 6.53
661 667 1.620822 AATGTTCCAGAAAAGCGCCT 58.379 45.000 2.29 0.00 0.00 5.52
662 668 1.620822 ATGTTCCAGAAAAGCGCCTT 58.379 45.000 2.29 0.00 0.00 4.35
663 669 0.951558 TGTTCCAGAAAAGCGCCTTC 59.048 50.000 2.29 7.87 0.00 3.46
664 670 0.951558 GTTCCAGAAAAGCGCCTTCA 59.048 50.000 18.86 0.00 0.00 3.02
665 671 1.541588 GTTCCAGAAAAGCGCCTTCAT 59.458 47.619 18.86 4.84 0.00 2.57
666 672 1.909700 TCCAGAAAAGCGCCTTCATT 58.090 45.000 18.86 0.00 0.00 2.57
667 673 2.238521 TCCAGAAAAGCGCCTTCATTT 58.761 42.857 18.86 4.38 0.00 2.32
668 674 3.417101 TCCAGAAAAGCGCCTTCATTTA 58.583 40.909 18.86 2.58 0.00 1.40
669 675 4.016444 TCCAGAAAAGCGCCTTCATTTAT 58.984 39.130 18.86 2.88 0.00 1.40
670 676 5.189928 TCCAGAAAAGCGCCTTCATTTATA 58.810 37.500 18.86 0.02 0.00 0.98
671 677 5.065988 TCCAGAAAAGCGCCTTCATTTATAC 59.934 40.000 18.86 3.67 0.00 1.47
672 678 4.963953 CAGAAAAGCGCCTTCATTTATACG 59.036 41.667 18.86 0.00 0.00 3.06
673 679 4.873827 AGAAAAGCGCCTTCATTTATACGA 59.126 37.500 18.86 0.00 0.00 3.43
674 680 4.531659 AAAGCGCCTTCATTTATACGAC 57.468 40.909 2.29 0.00 0.00 4.34
744 750 4.462132 CAGAGATGAGGACTTGAGTTGAGA 59.538 45.833 0.00 0.00 0.00 3.27
750 756 4.141846 TGAGGACTTGAGTTGAGATATGGC 60.142 45.833 0.00 0.00 0.00 4.40
755 769 4.079558 ACTTGAGTTGAGATATGGCCCATT 60.080 41.667 0.00 0.00 0.00 3.16
775 789 7.519970 GCCCATTTCCTGTAGTATCAAATAACG 60.520 40.741 0.00 0.00 0.00 3.18
809 823 4.285517 TGGAAAATGCCTGCCTTTGAATTA 59.714 37.500 0.00 0.00 0.00 1.40
810 824 5.221803 TGGAAAATGCCTGCCTTTGAATTAA 60.222 36.000 0.00 0.00 0.00 1.40
811 825 5.882000 GGAAAATGCCTGCCTTTGAATTAAT 59.118 36.000 0.00 0.00 0.00 1.40
812 826 6.375174 GGAAAATGCCTGCCTTTGAATTAATT 59.625 34.615 0.00 0.00 0.00 1.40
875 889 5.188434 TGATCTCTCATTTAGGTTGCTTGG 58.812 41.667 0.00 0.00 0.00 3.61
987 1092 6.621613 TGATATCTGTTAGCGTATCATCCAC 58.378 40.000 3.98 0.00 30.81 4.02
1038 1143 4.194640 CAGGGTACTTCAAGTCCATGATG 58.805 47.826 12.63 0.00 32.73 3.07
1684 1794 2.093973 GGAGAAAGATCCACGCAGAGAA 60.094 50.000 0.00 0.00 39.34 2.87
1712 1822 3.957497 TGTCCAACAGTAAAAATGGTGCT 59.043 39.130 0.00 0.00 33.89 4.40
1718 1828 4.460263 ACAGTAAAAATGGTGCTGAGACA 58.540 39.130 0.00 0.00 0.00 3.41
1904 2014 0.246635 AAGGGGAGTTGATCGTGTCG 59.753 55.000 0.00 0.00 0.00 4.35
2024 2134 3.057315 CGCCAAAGTCAATGAAGATTGGT 60.057 43.478 18.14 0.00 39.68 3.67
2028 2138 5.391310 CCAAAGTCAATGAAGATTGGTCTCG 60.391 44.000 12.21 0.00 39.68 4.04
2309 2419 8.431910 AAGAACCCTGATTCTTTAGTAGTACA 57.568 34.615 2.52 0.00 44.74 2.90
2311 2421 9.047947 AGAACCCTGATTCTTTAGTAGTACATT 57.952 33.333 2.52 0.00 35.29 2.71
2518 2630 2.430367 GCCAACGGTTGTCCTCCT 59.570 61.111 18.73 0.00 0.00 3.69
2594 2706 6.729690 TGTTTCAAGATGAACAAGGGAAAT 57.270 33.333 0.00 0.00 35.89 2.17
2599 2711 4.664688 AGATGAACAAGGGAAATGAGGT 57.335 40.909 0.00 0.00 0.00 3.85
2653 2765 1.676967 CTGCTGGCTTGGAAGGACC 60.677 63.158 0.00 0.00 39.54 4.46
2687 2799 5.522456 TGCAAATCAGCAAGTACAAAAGAG 58.478 37.500 0.00 0.00 42.46 2.85
3141 3261 5.490139 TTGAAGCTTTCAAGTGTGAAGAG 57.510 39.130 0.00 0.00 44.49 2.85
3142 3262 4.769688 TGAAGCTTTCAAGTGTGAAGAGA 58.230 39.130 0.00 0.00 44.49 3.10
3143 3263 4.813161 TGAAGCTTTCAAGTGTGAAGAGAG 59.187 41.667 0.00 0.00 44.49 3.20
3144 3264 4.414337 AGCTTTCAAGTGTGAAGAGAGT 57.586 40.909 0.00 0.00 44.49 3.24
3145 3265 4.775236 AGCTTTCAAGTGTGAAGAGAGTT 58.225 39.130 0.00 0.00 44.49 3.01
3146 3266 5.918608 AGCTTTCAAGTGTGAAGAGAGTTA 58.081 37.500 0.00 0.00 44.49 2.24
3794 3914 0.319083 TCAAGACGGTATGCCACGTT 59.681 50.000 0.00 0.00 44.24 3.99
4728 4867 0.820482 CGCCTTCATGCCCATCATCA 60.820 55.000 0.00 0.00 31.79 3.07
5014 5153 0.766674 ACCTGCCTTGTACTCCACCA 60.767 55.000 0.00 0.00 0.00 4.17
5129 5268 2.690173 TTTACCACAAATTGACGCCG 57.310 45.000 0.00 0.00 0.00 6.46
8349 8573 8.691661 ATATTTCGAAGGGTACAATATTTGCT 57.308 30.769 0.00 0.00 0.00 3.91
8468 8694 9.113838 CATCTTTAACTGTTTCTGCTATATGGT 57.886 33.333 0.00 0.00 0.00 3.55
8493 8719 2.038557 GGGAACTTCAACTACTCAGCCA 59.961 50.000 0.00 0.00 0.00 4.75
8685 8933 5.010213 GGGTAGAGGATAGTGAGACACATTC 59.990 48.000 4.75 1.21 36.74 2.67
8750 8998 5.859205 AGCAAAGATGAGGAAAAGTTGTT 57.141 34.783 0.00 0.00 0.00 2.83
8832 9082 4.141158 AGGGAAATGGAATCTGTATGGTCC 60.141 45.833 0.00 0.00 0.00 4.46
8833 9083 3.815401 GGAAATGGAATCTGTATGGTCCG 59.185 47.826 0.00 0.00 32.45 4.79
8861 9111 6.065976 ACCATAGGTGAAGATGAAATCACA 57.934 37.500 8.04 0.00 46.07 3.58
8870 9120 3.658351 GATGAAATCACAGGCACGTAC 57.342 47.619 0.00 0.00 44.70 3.67
9039 9291 4.614535 GCAAGGATGCGTATCATTCCATTC 60.615 45.833 15.61 0.00 43.83 2.67
9091 9343 1.009675 CTCTTGTTGCCGTGCACAC 60.010 57.895 18.64 8.87 38.71 3.82
9162 9419 4.560513 GCCTCAGCTAGATACATTCAGGTC 60.561 50.000 0.00 0.00 35.50 3.85
9171 9428 4.637534 AGATACATTCAGGTCACATGCAAC 59.362 41.667 0.00 0.00 0.00 4.17
9182 9439 5.046529 GGTCACATGCAACAGTCTATCTAG 58.953 45.833 0.00 0.00 0.00 2.43
9191 9448 3.725634 ACAGTCTATCTAGGCCTTTGGT 58.274 45.455 12.58 3.02 0.00 3.67
9192 9449 3.452627 ACAGTCTATCTAGGCCTTTGGTG 59.547 47.826 12.58 0.00 0.00 4.17
9193 9450 3.706594 CAGTCTATCTAGGCCTTTGGTGA 59.293 47.826 12.58 1.45 0.00 4.02
9194 9451 4.346418 CAGTCTATCTAGGCCTTTGGTGAT 59.654 45.833 12.58 10.06 0.00 3.06
9195 9452 5.540337 CAGTCTATCTAGGCCTTTGGTGATA 59.460 44.000 12.58 10.66 0.00 2.15
9196 9453 5.777732 AGTCTATCTAGGCCTTTGGTGATAG 59.222 44.000 12.58 18.70 36.44 2.08
9197 9454 5.046950 GTCTATCTAGGCCTTTGGTGATAGG 60.047 48.000 12.58 6.57 36.05 2.57
9198 9455 3.414759 TCTAGGCCTTTGGTGATAGGA 57.585 47.619 12.58 0.00 33.13 2.94
9199 9456 3.731431 TCTAGGCCTTTGGTGATAGGAA 58.269 45.455 12.58 0.00 33.13 3.36
9200 9457 2.808906 AGGCCTTTGGTGATAGGAAC 57.191 50.000 0.00 0.00 33.13 3.62
9201 9458 2.279173 AGGCCTTTGGTGATAGGAACT 58.721 47.619 0.00 0.00 46.37 3.01
9214 9471 2.351706 AGGAACTACTAGGGCTCTCG 57.648 55.000 0.00 0.00 36.02 4.04
9215 9472 1.845143 AGGAACTACTAGGGCTCTCGA 59.155 52.381 0.00 0.00 36.02 4.04
9216 9473 2.444010 AGGAACTACTAGGGCTCTCGAT 59.556 50.000 0.00 0.00 36.02 3.59
9217 9474 3.117436 AGGAACTACTAGGGCTCTCGATT 60.117 47.826 0.00 0.00 36.02 3.34
9218 9475 4.104420 AGGAACTACTAGGGCTCTCGATTA 59.896 45.833 0.00 0.00 36.02 1.75
9219 9476 4.826183 GGAACTACTAGGGCTCTCGATTAA 59.174 45.833 0.00 0.00 0.00 1.40
9220 9477 5.278414 GGAACTACTAGGGCTCTCGATTAAC 60.278 48.000 0.00 0.00 0.00 2.01
9221 9478 4.789807 ACTACTAGGGCTCTCGATTAACA 58.210 43.478 0.00 0.00 0.00 2.41
9222 9479 4.822896 ACTACTAGGGCTCTCGATTAACAG 59.177 45.833 0.00 0.00 0.00 3.16
9223 9480 2.959707 ACTAGGGCTCTCGATTAACAGG 59.040 50.000 0.00 0.00 0.00 4.00
9224 9481 2.160721 AGGGCTCTCGATTAACAGGA 57.839 50.000 0.00 0.00 0.00 3.86
9225 9482 2.035632 AGGGCTCTCGATTAACAGGAG 58.964 52.381 0.00 0.00 0.00 3.69
9226 9483 1.757699 GGGCTCTCGATTAACAGGAGT 59.242 52.381 0.00 0.00 0.00 3.85
9227 9484 2.957006 GGGCTCTCGATTAACAGGAGTA 59.043 50.000 0.00 0.00 0.00 2.59
9228 9485 3.574826 GGGCTCTCGATTAACAGGAGTAT 59.425 47.826 0.00 0.00 0.00 2.12
9229 9486 4.321378 GGGCTCTCGATTAACAGGAGTATC 60.321 50.000 0.00 0.00 0.00 2.24
9230 9487 4.468643 GCTCTCGATTAACAGGAGTATCG 58.531 47.826 0.00 0.00 37.49 2.92
9231 9488 4.614078 GCTCTCGATTAACAGGAGTATCGG 60.614 50.000 0.00 0.00 37.03 4.18
9232 9489 4.458397 TCTCGATTAACAGGAGTATCGGT 58.542 43.478 0.00 0.00 37.03 4.69
9233 9490 4.275196 TCTCGATTAACAGGAGTATCGGTG 59.725 45.833 0.00 0.00 37.03 4.94
9234 9491 3.317149 TCGATTAACAGGAGTATCGGTGG 59.683 47.826 0.00 0.00 37.03 4.61
9235 9492 3.067742 CGATTAACAGGAGTATCGGTGGT 59.932 47.826 0.00 0.00 34.27 4.16
9236 9493 3.880047 TTAACAGGAGTATCGGTGGTG 57.120 47.619 0.00 0.00 34.37 4.17
9237 9494 1.933021 AACAGGAGTATCGGTGGTGA 58.067 50.000 0.00 0.00 34.37 4.02
9238 9495 1.475403 ACAGGAGTATCGGTGGTGAG 58.525 55.000 0.00 0.00 34.37 3.51
9239 9496 1.272536 ACAGGAGTATCGGTGGTGAGT 60.273 52.381 0.00 0.00 34.37 3.41
9240 9497 1.135139 CAGGAGTATCGGTGGTGAGTG 59.865 57.143 0.00 0.00 34.37 3.51
9241 9498 0.460311 GGAGTATCGGTGGTGAGTGG 59.540 60.000 0.00 0.00 34.37 4.00
9242 9499 0.179108 GAGTATCGGTGGTGAGTGGC 60.179 60.000 0.00 0.00 0.00 5.01
9243 9500 0.902984 AGTATCGGTGGTGAGTGGCA 60.903 55.000 0.00 0.00 0.00 4.92
9244 9501 0.460284 GTATCGGTGGTGAGTGGCAG 60.460 60.000 0.00 0.00 0.00 4.85
9245 9502 1.613317 TATCGGTGGTGAGTGGCAGG 61.613 60.000 0.00 0.00 0.00 4.85
9246 9503 3.625897 CGGTGGTGAGTGGCAGGA 61.626 66.667 0.00 0.00 0.00 3.86
9247 9504 2.348998 GGTGGTGAGTGGCAGGAG 59.651 66.667 0.00 0.00 0.00 3.69
9248 9505 2.520536 GGTGGTGAGTGGCAGGAGT 61.521 63.158 0.00 0.00 0.00 3.85
9249 9506 1.192146 GGTGGTGAGTGGCAGGAGTA 61.192 60.000 0.00 0.00 0.00 2.59
9250 9507 0.905357 GTGGTGAGTGGCAGGAGTAT 59.095 55.000 0.00 0.00 0.00 2.12
9251 9508 1.279271 GTGGTGAGTGGCAGGAGTATT 59.721 52.381 0.00 0.00 0.00 1.89
9252 9509 1.278985 TGGTGAGTGGCAGGAGTATTG 59.721 52.381 0.00 0.00 0.00 1.90
9253 9510 1.407437 GGTGAGTGGCAGGAGTATTGG 60.407 57.143 0.00 0.00 0.00 3.16
9254 9511 1.279271 GTGAGTGGCAGGAGTATTGGT 59.721 52.381 0.00 0.00 0.00 3.67
9255 9512 2.500098 GTGAGTGGCAGGAGTATTGGTA 59.500 50.000 0.00 0.00 0.00 3.25
9256 9513 2.766263 TGAGTGGCAGGAGTATTGGTAG 59.234 50.000 0.00 0.00 0.00 3.18
9257 9514 1.486726 AGTGGCAGGAGTATTGGTAGC 59.513 52.381 0.00 0.00 0.00 3.58
9258 9515 0.464036 TGGCAGGAGTATTGGTAGCG 59.536 55.000 0.00 0.00 0.00 4.26
9259 9516 0.750850 GGCAGGAGTATTGGTAGCGA 59.249 55.000 0.00 0.00 0.00 4.93
9260 9517 1.344763 GGCAGGAGTATTGGTAGCGAT 59.655 52.381 0.00 0.00 0.00 4.58
9261 9518 2.224305 GGCAGGAGTATTGGTAGCGATT 60.224 50.000 0.00 0.00 0.00 3.34
9262 9519 3.006537 GGCAGGAGTATTGGTAGCGATTA 59.993 47.826 0.00 0.00 0.00 1.75
9263 9520 3.988517 GCAGGAGTATTGGTAGCGATTAC 59.011 47.826 0.00 0.00 0.00 1.89
9264 9521 4.500887 GCAGGAGTATTGGTAGCGATTACA 60.501 45.833 0.00 0.00 33.73 2.41
9265 9522 5.223382 CAGGAGTATTGGTAGCGATTACAG 58.777 45.833 0.00 0.00 33.73 2.74
9266 9523 5.009710 CAGGAGTATTGGTAGCGATTACAGA 59.990 44.000 0.00 0.00 33.73 3.41
9267 9524 5.241949 AGGAGTATTGGTAGCGATTACAGAG 59.758 44.000 0.00 0.00 33.73 3.35
9268 9525 5.241064 GGAGTATTGGTAGCGATTACAGAGA 59.759 44.000 0.00 0.00 33.73 3.10
9269 9526 6.074544 AGTATTGGTAGCGATTACAGAGAC 57.925 41.667 0.00 0.00 33.73 3.36
9270 9527 3.416119 TTGGTAGCGATTACAGAGACG 57.584 47.619 0.00 0.00 33.73 4.18
9271 9528 1.674441 TGGTAGCGATTACAGAGACGG 59.326 52.381 0.00 0.00 33.73 4.79
9272 9529 1.674962 GGTAGCGATTACAGAGACGGT 59.325 52.381 0.00 0.00 39.60 4.83
9273 9530 2.098770 GGTAGCGATTACAGAGACGGTT 59.901 50.000 0.00 0.00 37.61 4.44
9274 9531 3.313526 GGTAGCGATTACAGAGACGGTTA 59.686 47.826 0.00 0.00 37.61 2.85
9275 9532 3.417690 AGCGATTACAGAGACGGTTAC 57.582 47.619 0.00 0.00 32.83 2.50
9276 9533 2.751259 AGCGATTACAGAGACGGTTACA 59.249 45.455 0.00 0.00 32.83 2.41
9277 9534 2.850647 GCGATTACAGAGACGGTTACAC 59.149 50.000 0.00 0.00 0.00 2.90
9278 9535 3.096461 CGATTACAGAGACGGTTACACG 58.904 50.000 0.00 0.00 40.31 4.49
9279 9536 3.181517 CGATTACAGAGACGGTTACACGA 60.182 47.826 0.00 0.00 37.61 4.35
9280 9537 4.669965 CGATTACAGAGACGGTTACACGAA 60.670 45.833 0.00 0.00 37.61 3.85
9281 9538 4.771590 TTACAGAGACGGTTACACGAAT 57.228 40.909 0.00 0.00 37.61 3.34
9282 9539 3.655276 ACAGAGACGGTTACACGAATT 57.345 42.857 0.00 0.00 37.61 2.17
9283 9540 3.314553 ACAGAGACGGTTACACGAATTG 58.685 45.455 0.00 0.00 37.61 2.32
9284 9541 2.092211 CAGAGACGGTTACACGAATTGC 59.908 50.000 0.00 0.00 37.61 3.56
9286 9543 1.062258 GACGGTTACACGAATTGCGA 58.938 50.000 0.00 0.00 44.57 5.10
9287 9544 1.657094 GACGGTTACACGAATTGCGAT 59.343 47.619 0.00 0.00 44.57 4.58
9288 9545 1.657094 ACGGTTACACGAATTGCGATC 59.343 47.619 0.00 0.00 44.57 3.69
9289 9546 1.924524 CGGTTACACGAATTGCGATCT 59.075 47.619 0.00 0.00 44.57 2.75
9290 9547 3.110358 CGGTTACACGAATTGCGATCTA 58.890 45.455 0.00 0.00 44.57 1.98
9291 9548 3.179795 CGGTTACACGAATTGCGATCTAG 59.820 47.826 0.00 0.00 44.57 2.43
9292 9549 3.489785 GGTTACACGAATTGCGATCTAGG 59.510 47.826 0.00 0.00 44.57 3.02
9293 9550 2.225068 ACACGAATTGCGATCTAGGG 57.775 50.000 0.00 0.00 44.57 3.53
9294 9551 1.480954 ACACGAATTGCGATCTAGGGT 59.519 47.619 0.00 0.00 44.57 4.34
9295 9552 2.093658 ACACGAATTGCGATCTAGGGTT 60.094 45.455 0.00 0.00 44.57 4.11
9296 9553 2.540101 CACGAATTGCGATCTAGGGTTC 59.460 50.000 0.00 0.00 44.57 3.62
9297 9554 2.431057 ACGAATTGCGATCTAGGGTTCT 59.569 45.455 0.00 0.00 44.57 3.01
9298 9555 3.118738 ACGAATTGCGATCTAGGGTTCTT 60.119 43.478 0.00 0.00 44.57 2.52
9299 9556 3.246226 CGAATTGCGATCTAGGGTTCTTG 59.754 47.826 0.00 0.00 44.57 3.02
9300 9557 4.442706 GAATTGCGATCTAGGGTTCTTGA 58.557 43.478 0.00 0.00 0.00 3.02
9301 9558 3.526931 TTGCGATCTAGGGTTCTTGAG 57.473 47.619 0.00 0.00 0.00 3.02
9302 9559 1.757118 TGCGATCTAGGGTTCTTGAGG 59.243 52.381 0.00 0.00 0.00 3.86
9303 9560 1.757699 GCGATCTAGGGTTCTTGAGGT 59.242 52.381 0.00 0.00 0.00 3.85
9304 9561 2.957006 GCGATCTAGGGTTCTTGAGGTA 59.043 50.000 0.00 0.00 0.00 3.08
9305 9562 3.004944 GCGATCTAGGGTTCTTGAGGTAG 59.995 52.174 0.00 0.00 0.00 3.18
9306 9563 3.570550 CGATCTAGGGTTCTTGAGGTAGG 59.429 52.174 0.00 0.00 0.00 3.18
9307 9564 3.399952 TCTAGGGTTCTTGAGGTAGGG 57.600 52.381 0.00 0.00 0.00 3.53
9308 9565 2.931088 TCTAGGGTTCTTGAGGTAGGGA 59.069 50.000 0.00 0.00 0.00 4.20
9309 9566 2.735259 AGGGTTCTTGAGGTAGGGAA 57.265 50.000 0.00 0.00 0.00 3.97
9310 9567 2.999928 AGGGTTCTTGAGGTAGGGAAA 58.000 47.619 0.00 0.00 0.00 3.13
9311 9568 2.913617 AGGGTTCTTGAGGTAGGGAAAG 59.086 50.000 0.00 0.00 0.00 2.62
9312 9569 2.026169 GGGTTCTTGAGGTAGGGAAAGG 60.026 54.545 0.00 0.00 0.00 3.11
9313 9570 2.026169 GGTTCTTGAGGTAGGGAAAGGG 60.026 54.545 0.00 0.00 0.00 3.95
9314 9571 1.966845 TCTTGAGGTAGGGAAAGGGG 58.033 55.000 0.00 0.00 0.00 4.79
9315 9572 1.439543 TCTTGAGGTAGGGAAAGGGGA 59.560 52.381 0.00 0.00 0.00 4.81
9316 9573 2.157911 TCTTGAGGTAGGGAAAGGGGAA 60.158 50.000 0.00 0.00 0.00 3.97
9317 9574 2.444033 TGAGGTAGGGAAAGGGGAAA 57.556 50.000 0.00 0.00 0.00 3.13
9318 9575 2.720896 TGAGGTAGGGAAAGGGGAAAA 58.279 47.619 0.00 0.00 0.00 2.29
9319 9576 2.647802 TGAGGTAGGGAAAGGGGAAAAG 59.352 50.000 0.00 0.00 0.00 2.27
9320 9577 2.000803 AGGTAGGGAAAGGGGAAAAGG 58.999 52.381 0.00 0.00 0.00 3.11
9321 9578 1.006758 GGTAGGGAAAGGGGAAAAGGG 59.993 57.143 0.00 0.00 0.00 3.95
9322 9579 1.997791 GTAGGGAAAGGGGAAAAGGGA 59.002 52.381 0.00 0.00 0.00 4.20
9323 9580 1.552962 AGGGAAAGGGGAAAAGGGAA 58.447 50.000 0.00 0.00 0.00 3.97
9324 9581 1.433199 AGGGAAAGGGGAAAAGGGAAG 59.567 52.381 0.00 0.00 0.00 3.46
9325 9582 1.431633 GGGAAAGGGGAAAAGGGAAGA 59.568 52.381 0.00 0.00 0.00 2.87
9326 9583 2.557676 GGGAAAGGGGAAAAGGGAAGAG 60.558 54.545 0.00 0.00 0.00 2.85
9327 9584 2.171840 GAAAGGGGAAAAGGGAAGAGC 58.828 52.381 0.00 0.00 0.00 4.09
9328 9585 0.409876 AAGGGGAAAAGGGAAGAGCC 59.590 55.000 0.00 0.00 0.00 4.70
9329 9586 1.378646 GGGGAAAAGGGAAGAGCCG 60.379 63.158 0.00 0.00 37.63 5.52
9330 9587 1.379146 GGGAAAAGGGAAGAGCCGT 59.621 57.895 0.00 0.00 37.63 5.68
9331 9588 0.960861 GGGAAAAGGGAAGAGCCGTG 60.961 60.000 0.00 0.00 37.63 4.94
9332 9589 1.587043 GGAAAAGGGAAGAGCCGTGC 61.587 60.000 0.00 0.00 37.63 5.34
9333 9590 1.587043 GAAAAGGGAAGAGCCGTGCC 61.587 60.000 0.00 0.00 37.63 5.01
9334 9591 3.901797 AAAGGGAAGAGCCGTGCCG 62.902 63.158 0.00 0.00 37.63 5.69
9351 9608 3.195698 GCCGTTGCCGTGATCCTC 61.196 66.667 0.00 0.00 0.00 3.71
9352 9609 2.579201 CCGTTGCCGTGATCCTCT 59.421 61.111 0.00 0.00 0.00 3.69
9353 9610 1.811266 CCGTTGCCGTGATCCTCTG 60.811 63.158 0.00 0.00 0.00 3.35
9354 9611 1.215382 CGTTGCCGTGATCCTCTGA 59.785 57.895 0.00 0.00 0.00 3.27
9355 9612 0.389817 CGTTGCCGTGATCCTCTGAA 60.390 55.000 0.00 0.00 0.00 3.02
9356 9613 1.740380 CGTTGCCGTGATCCTCTGAAT 60.740 52.381 0.00 0.00 0.00 2.57
9357 9614 1.667724 GTTGCCGTGATCCTCTGAATG 59.332 52.381 0.00 0.00 0.00 2.67
9358 9615 0.904649 TGCCGTGATCCTCTGAATGT 59.095 50.000 0.00 0.00 0.00 2.71
9359 9616 1.134699 TGCCGTGATCCTCTGAATGTC 60.135 52.381 0.00 0.00 0.00 3.06
9360 9617 1.845266 CCGTGATCCTCTGAATGTCG 58.155 55.000 0.00 0.00 0.00 4.35
9361 9618 1.405463 CCGTGATCCTCTGAATGTCGA 59.595 52.381 0.00 0.00 0.00 4.20
9362 9619 2.159240 CCGTGATCCTCTGAATGTCGAA 60.159 50.000 0.00 0.00 0.00 3.71
9363 9620 2.854777 CGTGATCCTCTGAATGTCGAAC 59.145 50.000 0.00 0.00 0.00 3.95
9364 9621 3.190874 GTGATCCTCTGAATGTCGAACC 58.809 50.000 0.00 0.00 0.00 3.62
9365 9622 2.168521 TGATCCTCTGAATGTCGAACCC 59.831 50.000 0.00 0.00 0.00 4.11
9366 9623 1.938585 TCCTCTGAATGTCGAACCCT 58.061 50.000 0.00 0.00 0.00 4.34
9367 9624 2.257207 TCCTCTGAATGTCGAACCCTT 58.743 47.619 0.00 0.00 0.00 3.95
9368 9625 2.028112 TCCTCTGAATGTCGAACCCTTG 60.028 50.000 0.00 0.00 0.00 3.61
9369 9626 1.734465 CTCTGAATGTCGAACCCTTGC 59.266 52.381 0.00 0.00 0.00 4.01
9370 9627 0.443869 CTGAATGTCGAACCCTTGCG 59.556 55.000 0.00 0.00 0.00 4.85
9371 9628 0.250124 TGAATGTCGAACCCTTGCGT 60.250 50.000 0.00 0.00 0.00 5.24
9372 9629 0.872388 GAATGTCGAACCCTTGCGTT 59.128 50.000 0.00 0.00 0.00 4.84
9373 9630 0.591170 AATGTCGAACCCTTGCGTTG 59.409 50.000 0.00 0.00 0.00 4.10
9374 9631 1.852067 ATGTCGAACCCTTGCGTTGC 61.852 55.000 0.00 0.00 0.00 4.17
9375 9632 2.975799 TCGAACCCTTGCGTTGCC 60.976 61.111 0.00 0.00 0.00 4.52
9376 9633 4.383602 CGAACCCTTGCGTTGCCG 62.384 66.667 0.00 0.00 37.07 5.69
9377 9634 3.284449 GAACCCTTGCGTTGCCGT 61.284 61.111 0.00 0.00 36.15 5.68
9378 9635 3.249973 GAACCCTTGCGTTGCCGTC 62.250 63.158 0.00 0.00 36.15 4.79
9379 9636 3.767630 AACCCTTGCGTTGCCGTCT 62.768 57.895 0.00 0.00 36.15 4.18
9380 9637 2.047655 CCCTTGCGTTGCCGTCTA 60.048 61.111 0.00 0.00 36.15 2.59
9381 9638 2.388232 CCCTTGCGTTGCCGTCTAC 61.388 63.158 0.00 0.00 36.15 2.59
9382 9639 1.374252 CCTTGCGTTGCCGTCTACT 60.374 57.895 0.00 0.00 36.15 2.57
9383 9640 0.949105 CCTTGCGTTGCCGTCTACTT 60.949 55.000 0.00 0.00 36.15 2.24
9384 9641 0.865769 CTTGCGTTGCCGTCTACTTT 59.134 50.000 0.00 0.00 36.15 2.66
9385 9642 2.063266 CTTGCGTTGCCGTCTACTTTA 58.937 47.619 0.00 0.00 36.15 1.85
9386 9643 1.705256 TGCGTTGCCGTCTACTTTAG 58.295 50.000 0.00 0.00 36.15 1.85
9387 9644 1.000060 TGCGTTGCCGTCTACTTTAGT 60.000 47.619 0.00 0.00 36.15 2.24
9388 9645 2.228582 TGCGTTGCCGTCTACTTTAGTA 59.771 45.455 0.00 0.00 36.15 1.82
9389 9646 3.119388 TGCGTTGCCGTCTACTTTAGTAT 60.119 43.478 0.00 0.00 36.15 2.12
9390 9647 3.485013 GCGTTGCCGTCTACTTTAGTATC 59.515 47.826 0.00 0.00 36.15 2.24
9391 9648 3.722780 CGTTGCCGTCTACTTTAGTATCG 59.277 47.826 0.00 0.00 0.00 2.92
9392 9649 4.494690 CGTTGCCGTCTACTTTAGTATCGA 60.495 45.833 12.69 0.00 33.21 3.59
9393 9650 5.517904 GTTGCCGTCTACTTTAGTATCGAT 58.482 41.667 2.16 2.16 33.21 3.59
9394 9651 5.104562 TGCCGTCTACTTTAGTATCGATG 57.895 43.478 8.54 0.00 33.21 3.84
9395 9652 4.023450 TGCCGTCTACTTTAGTATCGATGG 60.023 45.833 8.54 10.74 36.08 3.51
9396 9653 4.615452 GCCGTCTACTTTAGTATCGATGGG 60.615 50.000 8.54 6.97 34.74 4.00
9397 9654 4.082895 CCGTCTACTTTAGTATCGATGGGG 60.083 50.000 8.54 0.00 32.50 4.96
9398 9655 4.518211 CGTCTACTTTAGTATCGATGGGGT 59.482 45.833 8.54 1.35 33.21 4.95
9399 9656 5.562307 CGTCTACTTTAGTATCGATGGGGTG 60.562 48.000 8.54 0.00 33.21 4.61
9400 9657 4.831155 TCTACTTTAGTATCGATGGGGTGG 59.169 45.833 8.54 1.20 0.00 4.61
9401 9658 2.704065 ACTTTAGTATCGATGGGGTGGG 59.296 50.000 8.54 0.00 0.00 4.61
9402 9659 1.053424 TTAGTATCGATGGGGTGGGC 58.947 55.000 8.54 0.00 0.00 5.36
9403 9660 0.190069 TAGTATCGATGGGGTGGGCT 59.810 55.000 8.54 0.00 0.00 5.19
9404 9661 0.694444 AGTATCGATGGGGTGGGCTT 60.694 55.000 8.54 0.00 0.00 4.35
9405 9662 0.250338 GTATCGATGGGGTGGGCTTC 60.250 60.000 8.54 0.00 0.00 3.86
9406 9663 0.692756 TATCGATGGGGTGGGCTTCA 60.693 55.000 8.54 0.00 0.00 3.02
9407 9664 2.270874 ATCGATGGGGTGGGCTTCAC 62.271 60.000 0.00 2.81 45.34 3.18
9408 9665 2.971598 CGATGGGGTGGGCTTCACT 61.972 63.158 9.77 0.00 45.38 3.41
9409 9666 1.384191 GATGGGGTGGGCTTCACTT 59.616 57.895 9.77 0.00 45.38 3.16
9410 9667 0.967380 GATGGGGTGGGCTTCACTTG 60.967 60.000 9.77 0.00 45.38 3.16
9411 9668 2.283173 GGGGTGGGCTTCACTTGG 60.283 66.667 9.77 0.00 45.38 3.61
9412 9669 2.840753 GGGGTGGGCTTCACTTGGA 61.841 63.158 9.77 0.00 45.38 3.53
9413 9670 1.603739 GGGTGGGCTTCACTTGGAC 60.604 63.158 9.77 0.00 45.38 4.02
9414 9671 1.603739 GGTGGGCTTCACTTGGACC 60.604 63.158 9.77 0.00 45.38 4.46
9415 9672 1.150536 GTGGGCTTCACTTGGACCA 59.849 57.895 0.00 0.00 42.86 4.02
9416 9673 1.150536 TGGGCTTCACTTGGACCAC 59.849 57.895 0.00 0.00 0.00 4.16
9417 9674 1.352622 TGGGCTTCACTTGGACCACT 61.353 55.000 0.00 0.00 0.00 4.00
9418 9675 0.606673 GGGCTTCACTTGGACCACTC 60.607 60.000 0.00 0.00 0.00 3.51
9419 9676 0.398318 GGCTTCACTTGGACCACTCT 59.602 55.000 0.00 0.00 0.00 3.24
9420 9677 1.517242 GCTTCACTTGGACCACTCTG 58.483 55.000 0.00 0.00 0.00 3.35
9421 9678 1.879796 GCTTCACTTGGACCACTCTGG 60.880 57.143 0.00 0.00 45.02 3.86
9422 9679 1.694150 CTTCACTTGGACCACTCTGGA 59.306 52.381 0.00 0.00 40.96 3.86
9423 9680 1.048601 TCACTTGGACCACTCTGGAC 58.951 55.000 0.00 0.00 40.96 4.02
9427 9684 2.997897 GGACCACTCTGGACCGCT 60.998 66.667 0.00 0.00 42.08 5.52
9428 9685 2.584391 GGACCACTCTGGACCGCTT 61.584 63.158 0.00 0.00 42.08 4.68
9429 9686 1.374758 GACCACTCTGGACCGCTTG 60.375 63.158 0.00 0.00 40.96 4.01
9430 9687 2.100879 GACCACTCTGGACCGCTTGT 62.101 60.000 0.00 0.00 40.96 3.16
9431 9688 1.374758 CCACTCTGGACCGCTTGTC 60.375 63.158 0.00 0.00 40.96 3.18
9438 9695 3.987404 GACCGCTTGTCCTGCAAT 58.013 55.556 0.00 0.00 38.09 3.56
9439 9696 2.257353 GACCGCTTGTCCTGCAATT 58.743 52.632 0.00 0.00 38.09 2.32
9440 9697 0.109597 GACCGCTTGTCCTGCAATTG 60.110 55.000 0.00 0.00 38.09 2.32
9441 9698 1.213537 CCGCTTGTCCTGCAATTGG 59.786 57.895 7.72 0.00 36.36 3.16
9442 9699 1.213537 CGCTTGTCCTGCAATTGGG 59.786 57.895 7.72 0.64 36.36 4.12
9443 9700 1.079612 GCTTGTCCTGCAATTGGGC 60.080 57.895 7.72 0.00 36.36 5.36
9444 9701 1.538687 GCTTGTCCTGCAATTGGGCT 61.539 55.000 7.72 0.00 36.36 5.19
9445 9702 0.971386 CTTGTCCTGCAATTGGGCTT 59.029 50.000 7.72 0.00 36.36 4.35
9446 9703 0.968405 TTGTCCTGCAATTGGGCTTC 59.032 50.000 7.72 0.00 31.07 3.86
9447 9704 0.112995 TGTCCTGCAATTGGGCTTCT 59.887 50.000 7.72 0.00 34.04 2.85
9448 9705 1.260544 GTCCTGCAATTGGGCTTCTT 58.739 50.000 7.72 0.00 34.04 2.52
9449 9706 1.067354 GTCCTGCAATTGGGCTTCTTG 60.067 52.381 7.72 0.00 34.04 3.02
9450 9707 0.248289 CCTGCAATTGGGCTTCTTGG 59.752 55.000 7.72 0.00 34.04 3.61
9451 9708 0.971386 CTGCAATTGGGCTTCTTGGT 59.029 50.000 7.72 0.00 34.04 3.67
9452 9709 1.345415 CTGCAATTGGGCTTCTTGGTT 59.655 47.619 7.72 0.00 34.04 3.67
9453 9710 1.344114 TGCAATTGGGCTTCTTGGTTC 59.656 47.619 7.72 0.00 34.04 3.62
9454 9711 1.669795 GCAATTGGGCTTCTTGGTTCG 60.670 52.381 7.72 0.00 0.00 3.95
9455 9712 1.067635 CAATTGGGCTTCTTGGTTCGG 60.068 52.381 0.00 0.00 0.00 4.30
9456 9713 0.611896 ATTGGGCTTCTTGGTTCGGG 60.612 55.000 0.00 0.00 0.00 5.14
9457 9714 2.002018 TTGGGCTTCTTGGTTCGGGT 62.002 55.000 0.00 0.00 0.00 5.28
9458 9715 1.674651 GGGCTTCTTGGTTCGGGTC 60.675 63.158 0.00 0.00 0.00 4.46
9459 9716 1.072505 GGCTTCTTGGTTCGGGTCA 59.927 57.895 0.00 0.00 0.00 4.02
9460 9717 1.235281 GGCTTCTTGGTTCGGGTCAC 61.235 60.000 0.00 0.00 0.00 3.67
9461 9718 1.566018 GCTTCTTGGTTCGGGTCACG 61.566 60.000 0.00 0.00 46.11 4.35
9462 9719 1.566018 CTTCTTGGTTCGGGTCACGC 61.566 60.000 0.00 0.00 43.86 5.34
9463 9720 3.411351 CTTGGTTCGGGTCACGCG 61.411 66.667 8.18 8.18 43.86 6.01
9464 9721 4.224274 TTGGTTCGGGTCACGCGT 62.224 61.111 14.59 5.58 43.86 6.01
9465 9722 4.953868 TGGTTCGGGTCACGCGTG 62.954 66.667 32.76 32.76 43.86 5.34
9490 9747 4.394712 CTGGGGCTCGGTGGTGTC 62.395 72.222 0.00 0.00 0.00 3.67
9495 9752 4.664677 GCTCGGTGGTGTCGCTGT 62.665 66.667 0.00 0.00 0.00 4.40
9496 9753 2.430921 CTCGGTGGTGTCGCTGTC 60.431 66.667 0.00 0.00 0.00 3.51
9497 9754 3.916392 CTCGGTGGTGTCGCTGTCC 62.916 68.421 0.00 0.00 0.00 4.02
9500 9757 4.295119 GTGGTGTCGCTGTCCGGT 62.295 66.667 0.00 0.00 37.59 5.28
9501 9758 4.293648 TGGTGTCGCTGTCCGGTG 62.294 66.667 0.00 0.00 37.59 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
310 316 1.802960 GGCGGATCATGCTATGTCTTG 59.197 52.381 8.80 0.00 0.00 3.02
559 565 3.442273 GTGGATTTTATTGGCCTTGTCGA 59.558 43.478 3.32 0.00 0.00 4.20
560 566 3.192422 TGTGGATTTTATTGGCCTTGTCG 59.808 43.478 3.32 0.00 0.00 4.35
561 567 4.799564 TGTGGATTTTATTGGCCTTGTC 57.200 40.909 3.32 0.00 0.00 3.18
562 568 5.484998 AGAATGTGGATTTTATTGGCCTTGT 59.515 36.000 3.32 0.00 0.00 3.16
563 569 5.981174 AGAATGTGGATTTTATTGGCCTTG 58.019 37.500 3.32 0.00 0.00 3.61
564 570 5.721000 TGAGAATGTGGATTTTATTGGCCTT 59.279 36.000 3.32 0.00 0.00 4.35
565 571 5.271598 TGAGAATGTGGATTTTATTGGCCT 58.728 37.500 3.32 0.00 0.00 5.19
566 572 5.360714 TCTGAGAATGTGGATTTTATTGGCC 59.639 40.000 0.00 0.00 0.00 5.36
567 573 6.455360 TCTGAGAATGTGGATTTTATTGGC 57.545 37.500 0.00 0.00 0.00 4.52
568 574 7.227314 TCGATCTGAGAATGTGGATTTTATTGG 59.773 37.037 0.00 0.00 0.00 3.16
569 575 8.146479 TCGATCTGAGAATGTGGATTTTATTG 57.854 34.615 0.00 0.00 0.00 1.90
570 576 8.616076 GTTCGATCTGAGAATGTGGATTTTATT 58.384 33.333 0.00 0.00 0.00 1.40
571 577 7.989741 AGTTCGATCTGAGAATGTGGATTTTAT 59.010 33.333 0.00 0.00 0.00 1.40
572 578 7.331026 AGTTCGATCTGAGAATGTGGATTTTA 58.669 34.615 0.00 0.00 0.00 1.52
573 579 6.176183 AGTTCGATCTGAGAATGTGGATTTT 58.824 36.000 0.00 0.00 0.00 1.82
574 580 5.738909 AGTTCGATCTGAGAATGTGGATTT 58.261 37.500 0.00 0.00 0.00 2.17
575 581 5.350504 AGTTCGATCTGAGAATGTGGATT 57.649 39.130 0.00 0.00 0.00 3.01
576 582 5.010516 CCTAGTTCGATCTGAGAATGTGGAT 59.989 44.000 6.25 0.00 0.00 3.41
577 583 4.339530 CCTAGTTCGATCTGAGAATGTGGA 59.660 45.833 6.25 0.00 0.00 4.02
578 584 4.098654 ACCTAGTTCGATCTGAGAATGTGG 59.901 45.833 6.25 0.00 0.00 4.17
579 585 5.255710 ACCTAGTTCGATCTGAGAATGTG 57.744 43.478 6.25 0.00 0.00 3.21
580 586 4.339814 GGACCTAGTTCGATCTGAGAATGT 59.660 45.833 6.25 0.00 0.00 2.71
581 587 4.582656 AGGACCTAGTTCGATCTGAGAATG 59.417 45.833 6.25 0.00 0.00 2.67
582 588 4.798882 AGGACCTAGTTCGATCTGAGAAT 58.201 43.478 6.25 0.00 0.00 2.40
583 589 4.237976 AGGACCTAGTTCGATCTGAGAA 57.762 45.455 6.25 0.00 0.00 2.87
584 590 3.935818 AGGACCTAGTTCGATCTGAGA 57.064 47.619 6.25 0.00 0.00 3.27
585 591 5.591067 ACTTAAGGACCTAGTTCGATCTGAG 59.409 44.000 7.53 0.32 0.00 3.35
586 592 5.507637 ACTTAAGGACCTAGTTCGATCTGA 58.492 41.667 7.53 0.00 0.00 3.27
587 593 5.838531 ACTTAAGGACCTAGTTCGATCTG 57.161 43.478 7.53 0.00 0.00 2.90
588 594 5.127356 CCAACTTAAGGACCTAGTTCGATCT 59.873 44.000 7.53 0.97 30.08 2.75
589 595 5.105432 ACCAACTTAAGGACCTAGTTCGATC 60.105 44.000 7.53 0.00 30.08 3.69
590 596 4.776308 ACCAACTTAAGGACCTAGTTCGAT 59.224 41.667 7.53 0.00 30.08 3.59
591 597 4.154942 ACCAACTTAAGGACCTAGTTCGA 58.845 43.478 7.53 0.00 30.08 3.71
592 598 4.220163 AGACCAACTTAAGGACCTAGTTCG 59.780 45.833 7.53 3.92 30.08 3.95
593 599 5.481122 AGAGACCAACTTAAGGACCTAGTTC 59.519 44.000 7.53 0.00 30.08 3.01
594 600 5.246429 CAGAGACCAACTTAAGGACCTAGTT 59.754 44.000 7.53 4.10 32.60 2.24
595 601 4.773149 CAGAGACCAACTTAAGGACCTAGT 59.227 45.833 7.53 0.00 0.00 2.57
596 602 4.382147 GCAGAGACCAACTTAAGGACCTAG 60.382 50.000 7.53 0.00 0.00 3.02
597 603 3.514309 GCAGAGACCAACTTAAGGACCTA 59.486 47.826 7.53 0.00 0.00 3.08
598 604 2.303311 GCAGAGACCAACTTAAGGACCT 59.697 50.000 7.53 0.00 0.00 3.85
599 605 2.701107 GCAGAGACCAACTTAAGGACC 58.299 52.381 7.53 0.00 0.00 4.46
600 606 2.338500 CGCAGAGACCAACTTAAGGAC 58.662 52.381 7.53 0.00 0.00 3.85
601 607 1.337823 GCGCAGAGACCAACTTAAGGA 60.338 52.381 0.30 0.00 0.00 3.36
602 608 1.079503 GCGCAGAGACCAACTTAAGG 58.920 55.000 0.30 0.00 0.00 2.69
603 609 1.079503 GGCGCAGAGACCAACTTAAG 58.920 55.000 10.83 0.00 0.00 1.85
604 610 3.226884 GGCGCAGAGACCAACTTAA 57.773 52.632 10.83 0.00 0.00 1.85
612 618 4.228567 GCTAGGGGGCGCAGAGAC 62.229 72.222 10.83 0.00 0.00 3.36
613 619 4.777854 TGCTAGGGGGCGCAGAGA 62.778 66.667 10.83 0.00 34.52 3.10
614 620 4.537433 GTGCTAGGGGGCGCAGAG 62.537 72.222 10.83 0.00 41.71 3.35
618 624 3.622060 TTTCTGTGCTAGGGGGCGC 62.622 63.158 0.00 0.00 42.34 6.53
619 625 1.745489 GTTTCTGTGCTAGGGGGCG 60.745 63.158 0.00 0.00 34.52 6.13
620 626 1.378646 GGTTTCTGTGCTAGGGGGC 60.379 63.158 0.00 0.00 0.00 5.80
621 627 0.253327 GAGGTTTCTGTGCTAGGGGG 59.747 60.000 0.00 0.00 0.00 5.40
622 628 1.280457 AGAGGTTTCTGTGCTAGGGG 58.720 55.000 0.00 0.00 30.72 4.79
623 629 4.080863 ACATTAGAGGTTTCTGTGCTAGGG 60.081 45.833 0.00 0.00 34.79 3.53
624 630 5.091261 ACATTAGAGGTTTCTGTGCTAGG 57.909 43.478 0.00 0.00 34.79 3.02
625 631 5.582665 GGAACATTAGAGGTTTCTGTGCTAG 59.417 44.000 0.00 0.00 34.79 3.42
626 632 5.012664 TGGAACATTAGAGGTTTCTGTGCTA 59.987 40.000 0.00 0.00 34.79 3.49
627 633 4.202461 TGGAACATTAGAGGTTTCTGTGCT 60.202 41.667 0.00 0.00 34.79 4.40
628 634 4.072131 TGGAACATTAGAGGTTTCTGTGC 58.928 43.478 0.00 0.00 34.79 4.57
629 635 5.551233 TCTGGAACATTAGAGGTTTCTGTG 58.449 41.667 0.00 0.00 38.20 3.66
630 636 5.825593 TCTGGAACATTAGAGGTTTCTGT 57.174 39.130 0.00 0.00 38.20 3.41
631 637 7.510549 TTTTCTGGAACATTAGAGGTTTCTG 57.489 36.000 0.00 0.00 38.20 3.02
632 638 6.207614 GCTTTTCTGGAACATTAGAGGTTTCT 59.792 38.462 0.00 0.00 38.20 2.52
633 639 6.382608 GCTTTTCTGGAACATTAGAGGTTTC 58.617 40.000 0.00 0.00 38.20 2.78
634 640 5.048713 CGCTTTTCTGGAACATTAGAGGTTT 60.049 40.000 0.00 0.00 38.20 3.27
635 641 4.455877 CGCTTTTCTGGAACATTAGAGGTT 59.544 41.667 0.00 0.00 38.20 3.50
636 642 4.003648 CGCTTTTCTGGAACATTAGAGGT 58.996 43.478 0.00 0.00 38.20 3.85
637 643 3.181506 GCGCTTTTCTGGAACATTAGAGG 60.182 47.826 0.00 0.00 38.20 3.69
638 644 3.181506 GGCGCTTTTCTGGAACATTAGAG 60.182 47.826 7.64 0.00 38.20 2.43
639 645 2.747446 GGCGCTTTTCTGGAACATTAGA 59.253 45.455 7.64 0.00 38.20 2.10
640 646 2.749621 AGGCGCTTTTCTGGAACATTAG 59.250 45.455 7.64 0.00 38.20 1.73
641 647 2.790433 AGGCGCTTTTCTGGAACATTA 58.210 42.857 7.64 0.00 38.20 1.90
642 648 1.620822 AGGCGCTTTTCTGGAACATT 58.379 45.000 7.64 0.00 38.20 2.71
643 649 1.541588 GAAGGCGCTTTTCTGGAACAT 59.458 47.619 6.11 0.00 38.20 2.71
644 650 0.951558 GAAGGCGCTTTTCTGGAACA 59.048 50.000 6.11 0.00 0.00 3.18
645 651 0.951558 TGAAGGCGCTTTTCTGGAAC 59.048 50.000 20.28 3.05 0.00 3.62
646 652 1.909700 ATGAAGGCGCTTTTCTGGAA 58.090 45.000 20.28 6.22 0.00 3.53
647 653 1.909700 AATGAAGGCGCTTTTCTGGA 58.090 45.000 20.28 6.50 0.00 3.86
648 654 2.730550 AAATGAAGGCGCTTTTCTGG 57.269 45.000 20.28 0.00 0.00 3.86
649 655 4.963953 CGTATAAATGAAGGCGCTTTTCTG 59.036 41.667 20.28 0.00 0.00 3.02
650 656 4.873827 TCGTATAAATGAAGGCGCTTTTCT 59.126 37.500 20.28 2.79 0.00 2.52
651 657 4.962151 GTCGTATAAATGAAGGCGCTTTTC 59.038 41.667 6.11 11.87 0.00 2.29
652 658 4.393680 TGTCGTATAAATGAAGGCGCTTTT 59.606 37.500 6.11 1.22 0.00 2.27
653 659 3.936453 TGTCGTATAAATGAAGGCGCTTT 59.064 39.130 3.65 3.65 0.00 3.51
654 660 3.527533 TGTCGTATAAATGAAGGCGCTT 58.472 40.909 7.64 0.00 0.00 4.68
655 661 3.173668 TGTCGTATAAATGAAGGCGCT 57.826 42.857 7.64 0.00 0.00 5.92
656 662 3.554324 TCTTGTCGTATAAATGAAGGCGC 59.446 43.478 0.00 0.00 0.00 6.53
657 663 5.907197 ATCTTGTCGTATAAATGAAGGCG 57.093 39.130 0.00 0.00 0.00 5.52
658 664 9.997482 TTTTAATCTTGTCGTATAAATGAAGGC 57.003 29.630 0.00 0.00 0.00 4.35
708 714 6.928492 GTCCTCATCTCTGAAAGGATTATCAC 59.072 42.308 0.00 0.00 30.77 3.06
744 750 5.551583 TGATACTACAGGAAATGGGCCATAT 59.448 40.000 21.54 5.02 0.00 1.78
750 756 7.713507 TCGTTATTTGATACTACAGGAAATGGG 59.286 37.037 0.00 0.00 0.00 4.00
775 789 5.065090 GCAGGCATTTTCCACCATTTAATTC 59.935 40.000 0.00 0.00 0.00 2.17
810 824 8.454106 GCAGAAGTATGTGAAGATAACAACAAT 58.546 33.333 0.00 0.00 0.00 2.71
811 825 7.661437 AGCAGAAGTATGTGAAGATAACAACAA 59.339 33.333 0.00 0.00 0.00 2.83
812 826 7.118245 CAGCAGAAGTATGTGAAGATAACAACA 59.882 37.037 0.00 0.00 0.00 3.33
827 841 5.609423 CTCAGATAAAGCCAGCAGAAGTAT 58.391 41.667 0.00 0.00 0.00 2.12
875 889 1.052617 GGCCCAAGATAGGAGGAGAC 58.947 60.000 0.00 0.00 0.00 3.36
922 1027 9.878667 TCAATTCAATAAACATGCATCAGAAAT 57.121 25.926 0.00 0.00 0.00 2.17
923 1028 9.361315 CTCAATTCAATAAACATGCATCAGAAA 57.639 29.630 0.00 0.00 0.00 2.52
924 1029 8.741841 TCTCAATTCAATAAACATGCATCAGAA 58.258 29.630 0.00 0.00 0.00 3.02
925 1030 8.283699 TCTCAATTCAATAAACATGCATCAGA 57.716 30.769 0.00 0.00 0.00 3.27
926 1031 9.529325 AATCTCAATTCAATAAACATGCATCAG 57.471 29.630 0.00 0.00 0.00 2.90
970 1075 4.841443 ATACGTGGATGATACGCTAACA 57.159 40.909 0.00 0.00 44.87 2.41
971 1076 4.792189 GCTATACGTGGATGATACGCTAAC 59.208 45.833 0.00 0.00 44.87 2.34
987 1092 3.804325 CCTTGTCCATGAGTTGCTATACG 59.196 47.826 0.00 0.00 0.00 3.06
1038 1143 0.460459 GCTCCTGGAGTTTAGCGTCC 60.460 60.000 23.92 1.21 31.39 4.79
1047 1152 1.920835 GAACCCCTGCTCCTGGAGT 60.921 63.158 23.92 2.94 31.39 3.85
1248 1356 1.503347 AGGAAACCCAACCATGTCCTT 59.497 47.619 0.00 0.00 31.31 3.36
1249 1357 1.158007 AGGAAACCCAACCATGTCCT 58.842 50.000 0.00 0.00 0.00 3.85
1250 1358 1.256812 CAGGAAACCCAACCATGTCC 58.743 55.000 0.00 0.00 0.00 4.02
1461 1569 6.416631 TCAACCAAAACATTGAATGGATCA 57.583 33.333 10.27 0.00 36.75 2.92
1712 1822 1.227527 CTTGTGCCACCGTGTCTCA 60.228 57.895 0.00 0.00 0.00 3.27
1718 1828 2.111043 CCAGTCTTGTGCCACCGT 59.889 61.111 0.00 0.00 0.00 4.83
1904 2014 4.429108 GCTGTGTCTGATAGAAGACCTTC 58.571 47.826 1.67 1.67 45.03 3.46
2028 2138 3.806257 CGACAACCGCATAATCAGC 57.194 52.632 0.00 0.00 0.00 4.26
2148 2258 6.797454 ACCTTTCTCTATAACTAACTGCTCG 58.203 40.000 0.00 0.00 0.00 5.03
2283 2393 8.529476 TGTACTACTAAAGAATCAGGGTTCTTC 58.471 37.037 7.92 0.00 45.18 2.87
2327 2437 9.708222 CAGTTTATACTGCATCATTTACTGTTC 57.292 33.333 0.12 0.00 44.81 3.18
2431 2542 6.072838 AGCATGGCAATAAGAACGATAATGAG 60.073 38.462 0.00 0.00 0.00 2.90
2432 2543 5.764686 AGCATGGCAATAAGAACGATAATGA 59.235 36.000 0.00 0.00 0.00 2.57
2433 2544 6.005583 AGCATGGCAATAAGAACGATAATG 57.994 37.500 0.00 0.00 0.00 1.90
2434 2545 6.039717 ACAAGCATGGCAATAAGAACGATAAT 59.960 34.615 0.00 0.00 0.00 1.28
2594 2706 1.451504 CTGTTGGTCCTGCACCTCA 59.548 57.895 0.00 0.00 46.98 3.86
2599 2711 2.595463 GCTGCTGTTGGTCCTGCA 60.595 61.111 0.00 0.00 37.65 4.41
2653 2765 3.128349 GCTGATTTGCAGGCCATTATTG 58.872 45.455 5.01 0.00 45.03 1.90
2687 2799 5.066593 AGACCTTTGATCAGAAAACTCACC 58.933 41.667 0.00 0.00 0.00 4.02
3137 3257 3.589288 AGGCCCTTGACATTAACTCTCTT 59.411 43.478 0.00 0.00 0.00 2.85
3139 3259 3.536570 GAGGCCCTTGACATTAACTCTC 58.463 50.000 0.00 0.00 0.00 3.20
3140 3260 2.093447 CGAGGCCCTTGACATTAACTCT 60.093 50.000 0.00 0.00 0.00 3.24
3141 3261 2.280628 CGAGGCCCTTGACATTAACTC 58.719 52.381 0.00 0.00 0.00 3.01
3142 3262 1.065418 CCGAGGCCCTTGACATTAACT 60.065 52.381 0.00 0.00 0.00 2.24
3143 3263 1.339727 ACCGAGGCCCTTGACATTAAC 60.340 52.381 0.00 0.00 0.00 2.01
3144 3264 0.988832 ACCGAGGCCCTTGACATTAA 59.011 50.000 0.00 0.00 0.00 1.40
3145 3265 0.251916 CACCGAGGCCCTTGACATTA 59.748 55.000 0.00 0.00 0.00 1.90
3146 3266 1.002134 CACCGAGGCCCTTGACATT 60.002 57.895 0.00 0.00 0.00 2.71
3794 3914 3.189080 CCGCATTTCAGAAGTGATCAACA 59.811 43.478 9.78 0.00 30.85 3.33
4728 4867 0.251354 AGATTCTCAGTGCCGTGCAT 59.749 50.000 1.90 0.00 41.91 3.96
5014 5153 5.186198 CAAACTCCTGGGATTCGACTTTAT 58.814 41.667 0.00 0.00 0.00 1.40
7899 8123 3.881019 TAGCGCTCCTATCCCCCGG 62.881 68.421 16.34 0.00 0.00 5.73
8468 8694 4.021368 GCTGAGTAGTTGAAGTTCCCTGTA 60.021 45.833 0.00 0.00 0.00 2.74
8493 8719 2.226962 AAGGCCATTGCACATCTTCT 57.773 45.000 5.01 0.00 40.13 2.85
8685 8933 1.519408 AAGTTTCGTCCCGTTGATGG 58.481 50.000 0.00 0.00 0.00 3.51
8750 8998 1.412710 ACCTGAACTCAGCACGAGAAA 59.587 47.619 9.90 0.00 45.45 2.52
8861 9111 3.349927 TGTGATAGTACAGTACGTGCCT 58.650 45.455 5.02 0.00 0.00 4.75
8903 9153 6.987992 ACTACTTTGTACAGTTCCGAAAATCA 59.012 34.615 0.00 0.00 0.00 2.57
8911 9161 6.006759 ACGAGTACTACTTTGTACAGTTCC 57.993 41.667 0.00 0.00 43.65 3.62
9021 9273 5.877012 ACCTATGAATGGAATGATACGCATC 59.123 40.000 0.00 0.00 35.78 3.91
9034 9286 5.716703 ACTTTCTTTTCCCACCTATGAATGG 59.283 40.000 0.00 0.00 35.59 3.16
9039 9291 7.309194 CCTTGTAACTTTCTTTTCCCACCTATG 60.309 40.741 0.00 0.00 0.00 2.23
9091 9343 1.200483 CACTTCTGTGCCGCTATACG 58.800 55.000 0.00 0.00 37.38 3.06
9112 9366 3.342926 ACCTCCCTCTCTGCTCAATAT 57.657 47.619 0.00 0.00 0.00 1.28
9162 9419 3.806521 GCCTAGATAGACTGTTGCATGTG 59.193 47.826 0.00 0.00 0.00 3.21
9171 9428 3.706594 TCACCAAAGGCCTAGATAGACTG 59.293 47.826 5.16 0.00 0.00 3.51
9182 9439 2.808906 AGTTCCTATCACCAAAGGCC 57.191 50.000 0.00 0.00 32.55 5.19
9191 9448 4.505215 CGAGAGCCCTAGTAGTTCCTATCA 60.505 50.000 0.00 0.00 0.00 2.15
9192 9449 4.004982 CGAGAGCCCTAGTAGTTCCTATC 58.995 52.174 0.00 0.00 0.00 2.08
9193 9450 3.651904 TCGAGAGCCCTAGTAGTTCCTAT 59.348 47.826 0.00 0.00 0.00 2.57
9194 9451 3.044156 TCGAGAGCCCTAGTAGTTCCTA 58.956 50.000 0.00 0.00 0.00 2.94
9195 9452 1.845143 TCGAGAGCCCTAGTAGTTCCT 59.155 52.381 0.00 0.00 0.00 3.36
9196 9453 2.345124 TCGAGAGCCCTAGTAGTTCC 57.655 55.000 0.00 0.00 0.00 3.62
9197 9454 5.298777 TGTTAATCGAGAGCCCTAGTAGTTC 59.701 44.000 0.00 0.00 0.00 3.01
9198 9455 5.198965 TGTTAATCGAGAGCCCTAGTAGTT 58.801 41.667 0.00 0.00 0.00 2.24
9199 9456 4.789807 TGTTAATCGAGAGCCCTAGTAGT 58.210 43.478 0.00 0.00 0.00 2.73
9200 9457 4.216687 CCTGTTAATCGAGAGCCCTAGTAG 59.783 50.000 0.00 0.00 0.00 2.57
9201 9458 4.141321 TCCTGTTAATCGAGAGCCCTAGTA 60.141 45.833 0.00 0.00 0.00 1.82
9202 9459 2.959707 CCTGTTAATCGAGAGCCCTAGT 59.040 50.000 0.00 0.00 0.00 2.57
9203 9460 3.223435 TCCTGTTAATCGAGAGCCCTAG 58.777 50.000 0.00 0.00 0.00 3.02
9204 9461 3.223435 CTCCTGTTAATCGAGAGCCCTA 58.777 50.000 0.00 0.00 0.00 3.53
9205 9462 2.035632 CTCCTGTTAATCGAGAGCCCT 58.964 52.381 0.00 0.00 0.00 5.19
9206 9463 1.757699 ACTCCTGTTAATCGAGAGCCC 59.242 52.381 0.00 0.00 0.00 5.19
9207 9464 4.614078 CGATACTCCTGTTAATCGAGAGCC 60.614 50.000 0.00 0.00 42.88 4.70
9208 9465 4.468643 CGATACTCCTGTTAATCGAGAGC 58.531 47.826 0.00 0.00 42.88 4.09
9209 9466 4.515944 ACCGATACTCCTGTTAATCGAGAG 59.484 45.833 5.22 0.00 42.88 3.20
9210 9467 4.275196 CACCGATACTCCTGTTAATCGAGA 59.725 45.833 5.22 0.00 42.88 4.04
9211 9468 4.537965 CACCGATACTCCTGTTAATCGAG 58.462 47.826 5.22 0.00 42.88 4.04
9212 9469 3.317149 CCACCGATACTCCTGTTAATCGA 59.683 47.826 5.22 0.00 42.88 3.59
9213 9470 3.067742 ACCACCGATACTCCTGTTAATCG 59.932 47.826 0.00 0.00 40.60 3.34
9214 9471 4.098960 TCACCACCGATACTCCTGTTAATC 59.901 45.833 0.00 0.00 0.00 1.75
9215 9472 4.028131 TCACCACCGATACTCCTGTTAAT 58.972 43.478 0.00 0.00 0.00 1.40
9216 9473 3.433343 TCACCACCGATACTCCTGTTAA 58.567 45.455 0.00 0.00 0.00 2.01
9217 9474 3.021695 CTCACCACCGATACTCCTGTTA 58.978 50.000 0.00 0.00 0.00 2.41
9218 9475 1.825474 CTCACCACCGATACTCCTGTT 59.175 52.381 0.00 0.00 0.00 3.16
9219 9476 1.272536 ACTCACCACCGATACTCCTGT 60.273 52.381 0.00 0.00 0.00 4.00
9220 9477 1.135139 CACTCACCACCGATACTCCTG 59.865 57.143 0.00 0.00 0.00 3.86
9221 9478 1.475403 CACTCACCACCGATACTCCT 58.525 55.000 0.00 0.00 0.00 3.69
9222 9479 0.460311 CCACTCACCACCGATACTCC 59.540 60.000 0.00 0.00 0.00 3.85
9223 9480 0.179108 GCCACTCACCACCGATACTC 60.179 60.000 0.00 0.00 0.00 2.59
9224 9481 0.902984 TGCCACTCACCACCGATACT 60.903 55.000 0.00 0.00 0.00 2.12
9225 9482 0.460284 CTGCCACTCACCACCGATAC 60.460 60.000 0.00 0.00 0.00 2.24
9226 9483 1.613317 CCTGCCACTCACCACCGATA 61.613 60.000 0.00 0.00 0.00 2.92
9227 9484 2.665000 CTGCCACTCACCACCGAT 59.335 61.111 0.00 0.00 0.00 4.18
9228 9485 3.625897 CCTGCCACTCACCACCGA 61.626 66.667 0.00 0.00 0.00 4.69
9229 9486 3.596066 CTCCTGCCACTCACCACCG 62.596 68.421 0.00 0.00 0.00 4.94
9230 9487 1.192146 TACTCCTGCCACTCACCACC 61.192 60.000 0.00 0.00 0.00 4.61
9231 9488 0.905357 ATACTCCTGCCACTCACCAC 59.095 55.000 0.00 0.00 0.00 4.16
9232 9489 1.278985 CAATACTCCTGCCACTCACCA 59.721 52.381 0.00 0.00 0.00 4.17
9233 9490 1.407437 CCAATACTCCTGCCACTCACC 60.407 57.143 0.00 0.00 0.00 4.02
9234 9491 1.279271 ACCAATACTCCTGCCACTCAC 59.721 52.381 0.00 0.00 0.00 3.51
9235 9492 1.656587 ACCAATACTCCTGCCACTCA 58.343 50.000 0.00 0.00 0.00 3.41
9236 9493 2.483889 GCTACCAATACTCCTGCCACTC 60.484 54.545 0.00 0.00 0.00 3.51
9237 9494 1.486726 GCTACCAATACTCCTGCCACT 59.513 52.381 0.00 0.00 0.00 4.00
9238 9495 1.806623 CGCTACCAATACTCCTGCCAC 60.807 57.143 0.00 0.00 0.00 5.01
9239 9496 0.464036 CGCTACCAATACTCCTGCCA 59.536 55.000 0.00 0.00 0.00 4.92
9240 9497 0.750850 TCGCTACCAATACTCCTGCC 59.249 55.000 0.00 0.00 0.00 4.85
9241 9498 2.821991 ATCGCTACCAATACTCCTGC 57.178 50.000 0.00 0.00 0.00 4.85
9242 9499 5.009710 TCTGTAATCGCTACCAATACTCCTG 59.990 44.000 0.00 0.00 0.00 3.86
9243 9500 5.138276 TCTGTAATCGCTACCAATACTCCT 58.862 41.667 0.00 0.00 0.00 3.69
9244 9501 5.241064 TCTCTGTAATCGCTACCAATACTCC 59.759 44.000 0.00 0.00 0.00 3.85
9245 9502 6.144175 GTCTCTGTAATCGCTACCAATACTC 58.856 44.000 0.00 0.00 0.00 2.59
9246 9503 5.277876 CGTCTCTGTAATCGCTACCAATACT 60.278 44.000 0.00 0.00 0.00 2.12
9247 9504 4.910456 CGTCTCTGTAATCGCTACCAATAC 59.090 45.833 0.00 0.00 0.00 1.89
9248 9505 4.023450 CCGTCTCTGTAATCGCTACCAATA 60.023 45.833 0.00 0.00 0.00 1.90
9249 9506 3.243434 CCGTCTCTGTAATCGCTACCAAT 60.243 47.826 0.00 0.00 0.00 3.16
9250 9507 2.098607 CCGTCTCTGTAATCGCTACCAA 59.901 50.000 0.00 0.00 0.00 3.67
9251 9508 1.674441 CCGTCTCTGTAATCGCTACCA 59.326 52.381 0.00 0.00 0.00 3.25
9252 9509 1.674962 ACCGTCTCTGTAATCGCTACC 59.325 52.381 0.00 0.00 0.00 3.18
9253 9510 3.417690 AACCGTCTCTGTAATCGCTAC 57.582 47.619 0.00 0.00 0.00 3.58
9254 9511 3.940852 TGTAACCGTCTCTGTAATCGCTA 59.059 43.478 0.00 0.00 0.00 4.26
9255 9512 2.751259 TGTAACCGTCTCTGTAATCGCT 59.249 45.455 0.00 0.00 0.00 4.93
9256 9513 2.850647 GTGTAACCGTCTCTGTAATCGC 59.149 50.000 0.00 0.00 0.00 4.58
9257 9514 3.096461 CGTGTAACCGTCTCTGTAATCG 58.904 50.000 0.00 0.00 0.00 3.34
9258 9515 4.346734 TCGTGTAACCGTCTCTGTAATC 57.653 45.455 0.00 0.00 0.00 1.75
9259 9516 4.771590 TTCGTGTAACCGTCTCTGTAAT 57.228 40.909 0.00 0.00 0.00 1.89
9260 9517 4.771590 ATTCGTGTAACCGTCTCTGTAA 57.228 40.909 0.00 0.00 0.00 2.41
9261 9518 4.478699 CAATTCGTGTAACCGTCTCTGTA 58.521 43.478 0.00 0.00 0.00 2.74
9262 9519 3.314553 CAATTCGTGTAACCGTCTCTGT 58.685 45.455 0.00 0.00 0.00 3.41
9263 9520 2.092211 GCAATTCGTGTAACCGTCTCTG 59.908 50.000 0.00 0.00 0.00 3.35
9264 9521 2.334838 GCAATTCGTGTAACCGTCTCT 58.665 47.619 0.00 0.00 0.00 3.10
9265 9522 1.058695 CGCAATTCGTGTAACCGTCTC 59.941 52.381 0.00 0.00 0.00 3.36
9266 9523 1.065358 CGCAATTCGTGTAACCGTCT 58.935 50.000 0.00 0.00 0.00 4.18
9267 9524 1.062258 TCGCAATTCGTGTAACCGTC 58.938 50.000 0.00 0.00 39.67 4.79
9268 9525 1.657094 GATCGCAATTCGTGTAACCGT 59.343 47.619 0.00 0.00 39.67 4.83
9269 9526 1.924524 AGATCGCAATTCGTGTAACCG 59.075 47.619 0.00 0.00 39.67 4.44
9270 9527 3.489785 CCTAGATCGCAATTCGTGTAACC 59.510 47.826 0.00 0.00 39.67 2.85
9271 9528 3.489785 CCCTAGATCGCAATTCGTGTAAC 59.510 47.826 0.00 0.00 39.67 2.50
9272 9529 3.131577 ACCCTAGATCGCAATTCGTGTAA 59.868 43.478 0.00 0.00 39.67 2.41
9273 9530 2.691526 ACCCTAGATCGCAATTCGTGTA 59.308 45.455 0.00 0.00 39.67 2.90
9274 9531 1.480954 ACCCTAGATCGCAATTCGTGT 59.519 47.619 0.00 0.00 39.67 4.49
9275 9532 2.225068 ACCCTAGATCGCAATTCGTG 57.775 50.000 0.00 0.00 39.67 4.35
9276 9533 2.431057 AGAACCCTAGATCGCAATTCGT 59.569 45.455 0.00 0.00 39.67 3.85
9277 9534 3.099267 AGAACCCTAGATCGCAATTCG 57.901 47.619 0.00 0.00 40.15 3.34
9278 9535 4.442706 TCAAGAACCCTAGATCGCAATTC 58.557 43.478 0.00 0.00 0.00 2.17
9279 9536 4.446371 CTCAAGAACCCTAGATCGCAATT 58.554 43.478 0.00 0.00 0.00 2.32
9280 9537 3.181461 CCTCAAGAACCCTAGATCGCAAT 60.181 47.826 0.00 0.00 0.00 3.56
9281 9538 2.168521 CCTCAAGAACCCTAGATCGCAA 59.831 50.000 0.00 0.00 0.00 4.85
9282 9539 1.757118 CCTCAAGAACCCTAGATCGCA 59.243 52.381 0.00 0.00 0.00 5.10
9283 9540 1.757699 ACCTCAAGAACCCTAGATCGC 59.242 52.381 0.00 0.00 0.00 4.58
9284 9541 3.570550 CCTACCTCAAGAACCCTAGATCG 59.429 52.174 0.00 0.00 0.00 3.69
9285 9542 3.898741 CCCTACCTCAAGAACCCTAGATC 59.101 52.174 0.00 0.00 0.00 2.75
9286 9543 3.536434 TCCCTACCTCAAGAACCCTAGAT 59.464 47.826 0.00 0.00 0.00 1.98
9287 9544 2.931088 TCCCTACCTCAAGAACCCTAGA 59.069 50.000 0.00 0.00 0.00 2.43
9288 9545 3.399952 TCCCTACCTCAAGAACCCTAG 57.600 52.381 0.00 0.00 0.00 3.02
9289 9546 3.858696 TTCCCTACCTCAAGAACCCTA 57.141 47.619 0.00 0.00 0.00 3.53
9290 9547 2.735259 TTCCCTACCTCAAGAACCCT 57.265 50.000 0.00 0.00 0.00 4.34
9291 9548 2.026169 CCTTTCCCTACCTCAAGAACCC 60.026 54.545 0.00 0.00 0.00 4.11
9292 9549 2.026169 CCCTTTCCCTACCTCAAGAACC 60.026 54.545 0.00 0.00 0.00 3.62
9293 9550 2.026169 CCCCTTTCCCTACCTCAAGAAC 60.026 54.545 0.00 0.00 0.00 3.01
9294 9551 2.157911 TCCCCTTTCCCTACCTCAAGAA 60.158 50.000 0.00 0.00 0.00 2.52
9295 9552 1.439543 TCCCCTTTCCCTACCTCAAGA 59.560 52.381 0.00 0.00 0.00 3.02
9296 9553 1.966845 TCCCCTTTCCCTACCTCAAG 58.033 55.000 0.00 0.00 0.00 3.02
9297 9554 2.444033 TTCCCCTTTCCCTACCTCAA 57.556 50.000 0.00 0.00 0.00 3.02
9298 9555 2.444033 TTTCCCCTTTCCCTACCTCA 57.556 50.000 0.00 0.00 0.00 3.86
9299 9556 2.025226 CCTTTTCCCCTTTCCCTACCTC 60.025 54.545 0.00 0.00 0.00 3.85
9300 9557 2.000803 CCTTTTCCCCTTTCCCTACCT 58.999 52.381 0.00 0.00 0.00 3.08
9301 9558 1.006758 CCCTTTTCCCCTTTCCCTACC 59.993 57.143 0.00 0.00 0.00 3.18
9302 9559 1.997791 TCCCTTTTCCCCTTTCCCTAC 59.002 52.381 0.00 0.00 0.00 3.18
9303 9560 2.461874 TCCCTTTTCCCCTTTCCCTA 57.538 50.000 0.00 0.00 0.00 3.53
9304 9561 1.433199 CTTCCCTTTTCCCCTTTCCCT 59.567 52.381 0.00 0.00 0.00 4.20
9305 9562 1.431633 TCTTCCCTTTTCCCCTTTCCC 59.568 52.381 0.00 0.00 0.00 3.97
9306 9563 2.808919 CTCTTCCCTTTTCCCCTTTCC 58.191 52.381 0.00 0.00 0.00 3.13
9307 9564 2.171840 GCTCTTCCCTTTTCCCCTTTC 58.828 52.381 0.00 0.00 0.00 2.62
9308 9565 1.203187 GGCTCTTCCCTTTTCCCCTTT 60.203 52.381 0.00 0.00 0.00 3.11
9309 9566 0.409876 GGCTCTTCCCTTTTCCCCTT 59.590 55.000 0.00 0.00 0.00 3.95
9310 9567 1.853250 CGGCTCTTCCCTTTTCCCCT 61.853 60.000 0.00 0.00 0.00 4.79
9311 9568 1.378646 CGGCTCTTCCCTTTTCCCC 60.379 63.158 0.00 0.00 0.00 4.81
9312 9569 0.960861 CACGGCTCTTCCCTTTTCCC 60.961 60.000 0.00 0.00 0.00 3.97
9313 9570 1.587043 GCACGGCTCTTCCCTTTTCC 61.587 60.000 0.00 0.00 0.00 3.13
9314 9571 1.587043 GGCACGGCTCTTCCCTTTTC 61.587 60.000 0.00 0.00 0.00 2.29
9315 9572 1.603739 GGCACGGCTCTTCCCTTTT 60.604 57.895 0.00 0.00 0.00 2.27
9316 9573 2.034221 GGCACGGCTCTTCCCTTT 59.966 61.111 0.00 0.00 0.00 3.11
9337 9594 1.667724 CATTCAGAGGATCACGGCAAC 59.332 52.381 0.00 0.00 37.82 4.17
9338 9595 1.278985 ACATTCAGAGGATCACGGCAA 59.721 47.619 0.00 0.00 37.82 4.52
9339 9596 0.904649 ACATTCAGAGGATCACGGCA 59.095 50.000 0.00 0.00 37.82 5.69
9340 9597 1.576356 GACATTCAGAGGATCACGGC 58.424 55.000 0.00 0.00 37.82 5.68
9341 9598 1.405463 TCGACATTCAGAGGATCACGG 59.595 52.381 0.00 0.00 37.82 4.94
9342 9599 2.851805 TCGACATTCAGAGGATCACG 57.148 50.000 0.00 0.00 37.82 4.35
9343 9600 3.190874 GGTTCGACATTCAGAGGATCAC 58.809 50.000 0.00 0.00 37.82 3.06
9344 9601 2.168521 GGGTTCGACATTCAGAGGATCA 59.831 50.000 0.00 0.00 37.82 2.92
9345 9602 2.432510 AGGGTTCGACATTCAGAGGATC 59.567 50.000 0.00 0.00 0.00 3.36
9346 9603 2.472029 AGGGTTCGACATTCAGAGGAT 58.528 47.619 0.00 0.00 0.00 3.24
9347 9604 1.938585 AGGGTTCGACATTCAGAGGA 58.061 50.000 0.00 0.00 0.00 3.71
9348 9605 2.350522 CAAGGGTTCGACATTCAGAGG 58.649 52.381 0.00 0.00 0.00 3.69
9349 9606 1.734465 GCAAGGGTTCGACATTCAGAG 59.266 52.381 0.00 0.00 0.00 3.35
9350 9607 1.808411 GCAAGGGTTCGACATTCAGA 58.192 50.000 0.00 0.00 0.00 3.27
9351 9608 0.443869 CGCAAGGGTTCGACATTCAG 59.556 55.000 0.00 0.00 0.00 3.02
9352 9609 0.250124 ACGCAAGGGTTCGACATTCA 60.250 50.000 0.00 0.00 46.39 2.57
9353 9610 0.872388 AACGCAAGGGTTCGACATTC 59.128 50.000 0.00 0.00 46.39 2.67
9354 9611 0.591170 CAACGCAAGGGTTCGACATT 59.409 50.000 0.00 0.00 46.39 2.71
9355 9612 1.852067 GCAACGCAAGGGTTCGACAT 61.852 55.000 0.00 0.00 46.39 3.06
9356 9613 2.539338 GCAACGCAAGGGTTCGACA 61.539 57.895 0.00 0.00 46.39 4.35
9357 9614 2.251371 GCAACGCAAGGGTTCGAC 59.749 61.111 0.00 0.00 46.39 4.20
9358 9615 2.975799 GGCAACGCAAGGGTTCGA 60.976 61.111 0.00 0.00 46.39 3.71
9370 9627 4.913376 TCGATACTAAAGTAGACGGCAAC 58.087 43.478 14.71 0.00 36.08 4.17
9371 9628 5.506815 CCATCGATACTAAAGTAGACGGCAA 60.507 44.000 0.00 2.81 36.08 4.52
9372 9629 4.023450 CCATCGATACTAAAGTAGACGGCA 60.023 45.833 0.00 3.30 36.08 5.69
9373 9630 4.474113 CCATCGATACTAAAGTAGACGGC 58.526 47.826 0.00 0.00 36.08 5.68
9374 9631 4.082895 CCCCATCGATACTAAAGTAGACGG 60.083 50.000 0.00 3.40 36.08 4.79
9375 9632 4.518211 ACCCCATCGATACTAAAGTAGACG 59.482 45.833 0.00 10.94 36.42 4.18
9376 9633 5.278858 CCACCCCATCGATACTAAAGTAGAC 60.279 48.000 0.00 0.00 33.52 2.59
9377 9634 4.831155 CCACCCCATCGATACTAAAGTAGA 59.169 45.833 0.00 0.00 33.52 2.59
9378 9635 4.021368 CCCACCCCATCGATACTAAAGTAG 60.021 50.000 0.00 0.00 33.52 2.57
9379 9636 3.899360 CCCACCCCATCGATACTAAAGTA 59.101 47.826 0.00 0.00 34.67 2.24
9380 9637 2.704065 CCCACCCCATCGATACTAAAGT 59.296 50.000 0.00 0.00 0.00 2.66
9381 9638 2.550208 GCCCACCCCATCGATACTAAAG 60.550 54.545 0.00 0.00 0.00 1.85
9382 9639 1.418637 GCCCACCCCATCGATACTAAA 59.581 52.381 0.00 0.00 0.00 1.85
9383 9640 1.053424 GCCCACCCCATCGATACTAA 58.947 55.000 0.00 0.00 0.00 2.24
9384 9641 0.190069 AGCCCACCCCATCGATACTA 59.810 55.000 0.00 0.00 0.00 1.82
9385 9642 0.694444 AAGCCCACCCCATCGATACT 60.694 55.000 0.00 0.00 0.00 2.12
9386 9643 0.250338 GAAGCCCACCCCATCGATAC 60.250 60.000 0.00 0.00 0.00 2.24
9387 9644 0.692756 TGAAGCCCACCCCATCGATA 60.693 55.000 0.00 0.00 0.00 2.92
9388 9645 2.000701 TGAAGCCCACCCCATCGAT 61.001 57.895 0.00 0.00 0.00 3.59
9389 9646 2.609299 TGAAGCCCACCCCATCGA 60.609 61.111 0.00 0.00 0.00 3.59
9390 9647 2.438434 GTGAAGCCCACCCCATCG 60.438 66.667 0.00 0.00 39.86 3.84
9391 9648 0.967380 CAAGTGAAGCCCACCCCATC 60.967 60.000 3.51 0.00 46.87 3.51
9392 9649 1.077265 CAAGTGAAGCCCACCCCAT 59.923 57.895 3.51 0.00 46.87 4.00
9393 9650 2.520458 CAAGTGAAGCCCACCCCA 59.480 61.111 3.51 0.00 46.87 4.96
9394 9651 2.283173 CCAAGTGAAGCCCACCCC 60.283 66.667 3.51 0.00 46.87 4.95
9395 9652 1.603739 GTCCAAGTGAAGCCCACCC 60.604 63.158 3.51 0.00 46.87 4.61
9396 9653 1.603739 GGTCCAAGTGAAGCCCACC 60.604 63.158 3.51 0.00 46.87 4.61
9397 9654 1.150536 TGGTCCAAGTGAAGCCCAC 59.849 57.895 0.00 0.00 46.03 4.61
9398 9655 1.150536 GTGGTCCAAGTGAAGCCCA 59.849 57.895 0.00 0.00 0.00 5.36
9399 9656 0.606673 GAGTGGTCCAAGTGAAGCCC 60.607 60.000 0.00 0.00 0.00 5.19
9400 9657 0.398318 AGAGTGGTCCAAGTGAAGCC 59.602 55.000 0.00 0.00 0.00 4.35
9401 9658 1.517242 CAGAGTGGTCCAAGTGAAGC 58.483 55.000 0.00 0.00 0.00 3.86
9402 9659 1.694150 TCCAGAGTGGTCCAAGTGAAG 59.306 52.381 0.00 0.00 39.03 3.02
9403 9660 1.416401 GTCCAGAGTGGTCCAAGTGAA 59.584 52.381 0.00 0.00 39.03 3.18
9404 9661 1.048601 GTCCAGAGTGGTCCAAGTGA 58.951 55.000 0.00 0.00 39.03 3.41
9405 9662 0.035458 GGTCCAGAGTGGTCCAAGTG 59.965 60.000 0.00 0.00 43.84 3.16
9406 9663 1.472662 CGGTCCAGAGTGGTCCAAGT 61.473 60.000 9.49 0.00 44.49 3.16
9407 9664 1.293498 CGGTCCAGAGTGGTCCAAG 59.707 63.158 9.49 0.00 44.49 3.61
9408 9665 2.879233 GCGGTCCAGAGTGGTCCAA 61.879 63.158 9.49 0.00 44.49 3.53
9409 9666 3.311110 GCGGTCCAGAGTGGTCCA 61.311 66.667 9.49 0.00 44.49 4.02
9410 9667 2.584391 AAGCGGTCCAGAGTGGTCC 61.584 63.158 0.00 0.00 41.47 4.46
9411 9668 1.374758 CAAGCGGTCCAGAGTGGTC 60.375 63.158 0.00 0.00 39.03 4.02
9412 9669 2.100879 GACAAGCGGTCCAGAGTGGT 62.101 60.000 0.59 0.00 40.83 4.16
9413 9670 1.374758 GACAAGCGGTCCAGAGTGG 60.375 63.158 0.59 0.00 40.83 4.00
9414 9671 4.268687 GACAAGCGGTCCAGAGTG 57.731 61.111 0.59 0.00 40.83 3.51
9421 9678 0.109597 CAATTGCAGGACAAGCGGTC 60.110 55.000 0.00 3.28 42.87 4.79
9422 9679 1.526575 CCAATTGCAGGACAAGCGGT 61.527 55.000 0.00 0.00 42.87 5.68
9423 9680 1.213537 CCAATTGCAGGACAAGCGG 59.786 57.895 0.00 0.00 42.87 5.52
9424 9681 1.213537 CCCAATTGCAGGACAAGCG 59.786 57.895 0.00 0.00 42.87 4.68
9425 9682 1.079612 GCCCAATTGCAGGACAAGC 60.080 57.895 0.00 0.00 42.87 4.01
9426 9683 0.971386 AAGCCCAATTGCAGGACAAG 59.029 50.000 0.00 0.00 42.87 3.16
9427 9684 0.968405 GAAGCCCAATTGCAGGACAA 59.032 50.000 0.00 0.00 44.01 3.18
9428 9685 0.112995 AGAAGCCCAATTGCAGGACA 59.887 50.000 0.00 0.00 0.00 4.02
9429 9686 1.067354 CAAGAAGCCCAATTGCAGGAC 60.067 52.381 0.00 0.00 0.00 3.85
9430 9687 1.259609 CAAGAAGCCCAATTGCAGGA 58.740 50.000 0.00 0.00 0.00 3.86
9431 9688 0.248289 CCAAGAAGCCCAATTGCAGG 59.752 55.000 0.00 0.00 0.00 4.85
9432 9689 0.971386 ACCAAGAAGCCCAATTGCAG 59.029 50.000 0.00 0.00 0.00 4.41
9433 9690 1.344114 GAACCAAGAAGCCCAATTGCA 59.656 47.619 0.00 0.00 0.00 4.08
9434 9691 1.669795 CGAACCAAGAAGCCCAATTGC 60.670 52.381 0.00 0.00 0.00 3.56
9435 9692 1.067635 CCGAACCAAGAAGCCCAATTG 60.068 52.381 0.00 0.00 0.00 2.32
9436 9693 1.256812 CCGAACCAAGAAGCCCAATT 58.743 50.000 0.00 0.00 0.00 2.32
9437 9694 0.611896 CCCGAACCAAGAAGCCCAAT 60.612 55.000 0.00 0.00 0.00 3.16
9438 9695 1.228429 CCCGAACCAAGAAGCCCAA 60.228 57.895 0.00 0.00 0.00 4.12
9439 9696 2.406002 GACCCGAACCAAGAAGCCCA 62.406 60.000 0.00 0.00 0.00 5.36
9440 9697 1.674651 GACCCGAACCAAGAAGCCC 60.675 63.158 0.00 0.00 0.00 5.19
9441 9698 1.072505 TGACCCGAACCAAGAAGCC 59.927 57.895 0.00 0.00 0.00 4.35
9442 9699 1.566018 CGTGACCCGAACCAAGAAGC 61.566 60.000 0.00 0.00 39.56 3.86
9443 9700 1.566018 GCGTGACCCGAACCAAGAAG 61.566 60.000 0.00 0.00 39.56 2.85
9444 9701 1.595929 GCGTGACCCGAACCAAGAA 60.596 57.895 0.00 0.00 39.56 2.52
9445 9702 2.029964 GCGTGACCCGAACCAAGA 59.970 61.111 0.00 0.00 39.56 3.02
9446 9703 3.411351 CGCGTGACCCGAACCAAG 61.411 66.667 0.00 0.00 39.56 3.61
9447 9704 4.224274 ACGCGTGACCCGAACCAA 62.224 61.111 12.93 0.00 39.56 3.67
9448 9705 4.953868 CACGCGTGACCCGAACCA 62.954 66.667 34.93 0.00 39.56 3.67
9473 9730 4.394712 GACACCACCGAGCCCCAG 62.395 72.222 0.00 0.00 0.00 4.45
9478 9735 4.664677 ACAGCGACACCACCGAGC 62.665 66.667 0.00 0.00 0.00 5.03
9479 9736 2.430921 GACAGCGACACCACCGAG 60.431 66.667 0.00 0.00 0.00 4.63
9480 9737 3.986006 GGACAGCGACACCACCGA 61.986 66.667 0.00 0.00 0.00 4.69
9483 9740 4.295119 ACCGGACAGCGACACCAC 62.295 66.667 9.46 0.00 0.00 4.16
9484 9741 4.293648 CACCGGACAGCGACACCA 62.294 66.667 9.46 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.