Multiple sequence alignment - TraesCS3B01G408400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G408400 chr3B 100.000 2444 0 0 1 2444 644015519 644017962 0.000000e+00 4514.0
1 TraesCS3B01G408400 chr3B 94.783 115 6 0 1585 1699 23408457 23408571 1.930000e-41 180.0
2 TraesCS3B01G408400 chr3B 94.545 55 2 1 1499 1552 59180607 59180553 1.560000e-12 84.2
3 TraesCS3B01G408400 chr3D 93.189 969 41 7 544 1495 481877570 481878530 0.000000e+00 1400.0
4 TraesCS3B01G408400 chr3D 80.655 336 31 15 1698 2027 481878544 481878851 1.890000e-56 230.0
5 TraesCS3B01G408400 chr3D 93.277 119 8 0 1585 1703 38253182 38253064 2.500000e-40 176.0
6 TraesCS3B01G408400 chr3D 87.952 83 6 2 5 86 461428934 461428855 7.190000e-16 95.3
7 TraesCS3B01G408400 chr3A 89.448 1033 49 23 517 1492 625038555 625039584 0.000000e+00 1249.0
8 TraesCS3B01G408400 chr3A 90.000 90 9 0 90 179 625037181 625037270 1.540000e-22 117.0
9 TraesCS3B01G408400 chr3A 93.939 66 4 0 1 66 647361497 647361432 1.550000e-17 100.0
10 TraesCS3B01G408400 chr3A 91.379 58 5 0 1501 1558 750297091 750297148 2.010000e-11 80.5
11 TraesCS3B01G408400 chr2A 93.689 206 11 2 2101 2305 762777268 762777472 8.490000e-80 307.0
12 TraesCS3B01G408400 chr2A 83.333 282 29 9 252 517 756928327 756928048 6.750000e-61 244.0
13 TraesCS3B01G408400 chr2A 92.308 143 11 0 2301 2443 762777926 762778068 1.150000e-48 204.0
14 TraesCS3B01G408400 chr2A 96.774 62 2 0 1 62 612391148 612391209 1.200000e-18 104.0
15 TraesCS3B01G408400 chr2A 96.226 53 1 1 1501 1552 57440975 57440923 4.330000e-13 86.1
16 TraesCS3B01G408400 chr4B 90.991 222 16 4 2086 2305 611407235 611407016 1.840000e-76 296.0
17 TraesCS3B01G408400 chr4B 95.745 141 6 0 2304 2444 611406557 611406417 6.800000e-56 228.0
18 TraesCS3B01G408400 chr4B 93.388 121 7 1 1585 1704 502957237 502957117 6.940000e-41 178.0
19 TraesCS3B01G408400 chr6D 80.731 301 33 11 249 526 87389252 87389550 6.850000e-51 211.0
20 TraesCS3B01G408400 chr6D 92.982 57 3 1 1497 1552 147691131 147691187 5.600000e-12 82.4
21 TraesCS3B01G408400 chr7D 80.756 291 31 10 252 521 587122977 587122691 1.150000e-48 204.0
22 TraesCS3B01G408400 chr7D 80.068 296 34 16 252 525 559213062 559213354 1.920000e-46 196.0
23 TraesCS3B01G408400 chr4A 83.784 222 22 8 249 458 546508085 546508304 5.330000e-47 198.0
24 TraesCS3B01G408400 chr4A 87.755 147 15 3 1908 2053 572502397 572502253 4.180000e-38 169.0
25 TraesCS3B01G408400 chr5D 82.627 236 21 10 242 460 67588986 67589218 8.920000e-45 191.0
26 TraesCS3B01G408400 chr5B 79.365 315 31 23 234 518 35173418 35173728 8.920000e-45 191.0
27 TraesCS3B01G408400 chr5B 95.614 114 5 0 1585 1698 712462318 712462205 1.490000e-42 183.0
28 TraesCS3B01G408400 chr5B 98.361 61 1 0 1 61 689196969 689197029 9.240000e-20 108.0
29 TraesCS3B01G408400 chr5B 91.781 73 6 0 1 73 523134592 523134520 4.300000e-18 102.0
30 TraesCS3B01G408400 chr2D 94.958 119 6 0 1582 1700 287095408 287095526 1.150000e-43 187.0
31 TraesCS3B01G408400 chrUn 95.614 114 5 0 1585 1698 127140136 127140023 1.490000e-42 183.0
32 TraesCS3B01G408400 chrUn 81.982 222 24 8 316 525 429089205 429089422 8.980000e-40 174.0
33 TraesCS3B01G408400 chr2B 94.828 116 6 0 1585 1700 693371212 693371327 5.370000e-42 182.0
34 TraesCS3B01G408400 chr2B 94.783 115 6 0 1585 1699 195678664 195678778 1.930000e-41 180.0
35 TraesCS3B01G408400 chr2B 96.226 53 1 1 1501 1552 42979947 42979999 4.330000e-13 86.1
36 TraesCS3B01G408400 chr6B 94.017 117 7 0 1585 1701 107162408 107162524 6.940000e-41 178.0
37 TraesCS3B01G408400 chr6B 89.552 67 4 3 1499 1563 295769294 295769359 5.600000e-12 82.4
38 TraesCS3B01G408400 chr1D 80.751 213 24 13 318 517 426179683 426179891 1.510000e-32 150.0
39 TraesCS3B01G408400 chr7A 96.825 63 2 0 1 63 246272299 246272237 3.320000e-19 106.0
40 TraesCS3B01G408400 chr6A 96.774 62 2 0 1 62 614469392 614469331 1.200000e-18 104.0
41 TraesCS3B01G408400 chr1B 95.385 65 3 0 1 65 651903438 651903502 1.200000e-18 104.0
42 TraesCS3B01G408400 chr1B 98.305 59 1 0 5 63 684049652 684049710 1.200000e-18 104.0
43 TraesCS3B01G408400 chr7B 91.045 67 4 2 1501 1565 481919135 481919201 3.350000e-14 89.8
44 TraesCS3B01G408400 chr4D 96.296 54 1 1 1500 1552 81661885 81661938 1.200000e-13 87.9
45 TraesCS3B01G408400 chr1A 96.296 54 1 1 1500 1552 335013028 335012975 1.200000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G408400 chr3B 644015519 644017962 2443 False 4514.0 4514 100.0000 1 2444 1 chr3B.!!$F2 2443
1 TraesCS3B01G408400 chr3D 481877570 481878851 1281 False 815.0 1400 86.9220 544 2027 2 chr3D.!!$F1 1483
2 TraesCS3B01G408400 chr3A 625037181 625039584 2403 False 683.0 1249 89.7240 90 1492 2 chr3A.!!$F2 1402
3 TraesCS3B01G408400 chr2A 762777268 762778068 800 False 255.5 307 92.9985 2101 2443 2 chr2A.!!$F2 342
4 TraesCS3B01G408400 chr4B 611406417 611407235 818 True 262.0 296 93.3680 2086 2444 2 chr4B.!!$R2 358

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
148 149 0.033504 GACGTGGCAGGACTTCTTGA 59.966 55.0 14.98 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 3344 0.038166 AACAACATCCACGCCCTCAT 59.962 50.0 0.0 0.0 0.0 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.726291 AAAGTGGTGGGACGAAAATTG 57.274 42.857 0.00 0.00 0.00 2.32
21 22 2.649531 AGTGGTGGGACGAAAATTGA 57.350 45.000 0.00 0.00 0.00 2.57
22 23 2.227194 AGTGGTGGGACGAAAATTGAC 58.773 47.619 0.00 0.00 0.00 3.18
23 24 1.268625 GTGGTGGGACGAAAATTGACC 59.731 52.381 0.00 0.00 0.00 4.02
24 25 0.519961 GGTGGGACGAAAATTGACCG 59.480 55.000 0.00 0.00 0.00 4.79
25 26 0.519961 GTGGGACGAAAATTGACCGG 59.480 55.000 0.00 0.00 0.00 5.28
26 27 1.238625 TGGGACGAAAATTGACCGGC 61.239 55.000 0.00 0.00 0.00 6.13
27 28 1.133869 GGACGAAAATTGACCGGCG 59.866 57.895 0.00 0.00 30.91 6.46
28 29 1.133869 GACGAAAATTGACCGGCGG 59.866 57.895 27.06 27.06 0.00 6.13
29 30 1.293267 GACGAAAATTGACCGGCGGA 61.293 55.000 35.78 11.41 0.00 5.54
30 31 1.296056 ACGAAAATTGACCGGCGGAG 61.296 55.000 35.78 7.40 0.00 4.63
31 32 1.017177 CGAAAATTGACCGGCGGAGA 61.017 55.000 35.78 17.86 0.00 3.71
32 33 0.446616 GAAAATTGACCGGCGGAGAC 59.553 55.000 35.78 22.33 0.00 3.36
33 34 0.036306 AAAATTGACCGGCGGAGACT 59.964 50.000 35.78 10.44 0.00 3.24
34 35 0.899720 AAATTGACCGGCGGAGACTA 59.100 50.000 35.78 19.23 0.00 2.59
35 36 0.175073 AATTGACCGGCGGAGACTAC 59.825 55.000 35.78 15.65 0.00 2.73
36 37 1.673808 ATTGACCGGCGGAGACTACC 61.674 60.000 35.78 12.05 0.00 3.18
37 38 2.753043 GACCGGCGGAGACTACCA 60.753 66.667 35.78 0.00 0.00 3.25
38 39 2.283388 ACCGGCGGAGACTACCAA 60.283 61.111 35.78 0.00 0.00 3.67
39 40 2.183555 CCGGCGGAGACTACCAAC 59.816 66.667 24.41 0.00 0.00 3.77
40 41 2.348888 CCGGCGGAGACTACCAACT 61.349 63.158 24.41 0.00 0.00 3.16
41 42 1.153823 CGGCGGAGACTACCAACTG 60.154 63.158 0.00 0.00 0.00 3.16
42 43 1.448013 GGCGGAGACTACCAACTGC 60.448 63.158 0.00 0.00 0.00 4.40
43 44 1.592223 GCGGAGACTACCAACTGCT 59.408 57.895 0.00 0.00 0.00 4.24
44 45 0.737715 GCGGAGACTACCAACTGCTG 60.738 60.000 0.00 0.00 0.00 4.41
45 46 0.737715 CGGAGACTACCAACTGCTGC 60.738 60.000 0.00 0.00 0.00 5.25
46 47 0.321671 GGAGACTACCAACTGCTGCA 59.678 55.000 0.88 0.88 0.00 4.41
47 48 1.065854 GGAGACTACCAACTGCTGCAT 60.066 52.381 1.31 0.00 0.00 3.96
48 49 2.616510 GGAGACTACCAACTGCTGCATT 60.617 50.000 1.31 0.00 0.00 3.56
49 50 3.369471 GGAGACTACCAACTGCTGCATTA 60.369 47.826 1.31 0.00 0.00 1.90
50 51 3.866651 AGACTACCAACTGCTGCATTAG 58.133 45.455 1.31 2.22 0.00 1.73
51 52 2.939103 GACTACCAACTGCTGCATTAGG 59.061 50.000 1.31 7.80 0.00 2.69
52 53 2.571653 ACTACCAACTGCTGCATTAGGA 59.428 45.455 17.59 0.00 0.00 2.94
63 64 7.792374 CTGCTGCATTAGGAGTAAAGATAAA 57.208 36.000 1.31 0.00 39.78 1.40
64 65 7.792374 TGCTGCATTAGGAGTAAAGATAAAG 57.208 36.000 0.00 0.00 35.34 1.85
65 66 7.338710 TGCTGCATTAGGAGTAAAGATAAAGT 58.661 34.615 0.00 0.00 35.34 2.66
66 67 7.280876 TGCTGCATTAGGAGTAAAGATAAAGTG 59.719 37.037 0.00 0.00 35.34 3.16
67 68 7.254932 GCTGCATTAGGAGTAAAGATAAAGTGG 60.255 40.741 0.00 0.00 35.34 4.00
68 69 6.542370 TGCATTAGGAGTAAAGATAAAGTGGC 59.458 38.462 0.00 0.00 0.00 5.01
69 70 6.017026 GCATTAGGAGTAAAGATAAAGTGGCC 60.017 42.308 0.00 0.00 0.00 5.36
70 71 6.886178 TTAGGAGTAAAGATAAAGTGGCCT 57.114 37.500 3.32 0.00 0.00 5.19
71 72 5.780958 AGGAGTAAAGATAAAGTGGCCTT 57.219 39.130 3.32 0.00 0.00 4.35
72 73 5.501156 AGGAGTAAAGATAAAGTGGCCTTG 58.499 41.667 3.32 0.00 0.00 3.61
73 74 5.014228 AGGAGTAAAGATAAAGTGGCCTTGT 59.986 40.000 3.32 0.00 0.00 3.16
74 75 5.710567 GGAGTAAAGATAAAGTGGCCTTGTT 59.289 40.000 3.32 0.00 0.00 2.83
75 76 6.208797 GGAGTAAAGATAAAGTGGCCTTGTTT 59.791 38.462 3.32 3.45 0.00 2.83
76 77 7.392393 GGAGTAAAGATAAAGTGGCCTTGTTTA 59.608 37.037 3.32 5.77 0.00 2.01
77 78 8.700439 AGTAAAGATAAAGTGGCCTTGTTTAA 57.300 30.769 3.32 0.00 0.00 1.52
78 79 9.309224 AGTAAAGATAAAGTGGCCTTGTTTAAT 57.691 29.630 3.32 0.00 0.00 1.40
79 80 9.923143 GTAAAGATAAAGTGGCCTTGTTTAATT 57.077 29.630 3.32 5.61 0.00 1.40
81 82 9.923143 AAAGATAAAGTGGCCTTGTTTAATTAC 57.077 29.630 3.32 0.00 0.00 1.89
82 83 8.644374 AGATAAAGTGGCCTTGTTTAATTACA 57.356 30.769 3.32 0.00 0.00 2.41
83 84 9.084533 AGATAAAGTGGCCTTGTTTAATTACAA 57.915 29.630 3.32 0.00 36.63 2.41
84 85 9.869757 GATAAAGTGGCCTTGTTTAATTACAAT 57.130 29.630 3.32 0.00 37.39 2.71
87 88 6.863275 AGTGGCCTTGTTTAATTACAATAGC 58.137 36.000 3.32 7.33 37.39 2.97
88 89 6.435904 AGTGGCCTTGTTTAATTACAATAGCA 59.564 34.615 3.32 0.00 38.19 3.49
89 90 7.124147 AGTGGCCTTGTTTAATTACAATAGCAT 59.876 33.333 3.32 2.78 38.19 3.79
90 91 7.763985 GTGGCCTTGTTTAATTACAATAGCATT 59.236 33.333 3.32 0.00 38.19 3.56
91 92 7.978975 TGGCCTTGTTTAATTACAATAGCATTC 59.021 33.333 3.32 3.41 38.19 2.67
105 106 1.937196 GCATTCGCGCTGCTTTTGTG 61.937 55.000 21.41 3.53 36.68 3.33
138 139 0.389817 TTTCGGATCTGACGTGGCAG 60.390 55.000 2.94 0.00 37.24 4.85
144 145 0.247736 ATCTGACGTGGCAGGACTTC 59.752 55.000 14.98 1.71 36.55 3.01
148 149 0.033504 GACGTGGCAGGACTTCTTGA 59.966 55.000 14.98 0.00 0.00 3.02
152 153 1.743252 GGCAGGACTTCTTGAGCCG 60.743 63.158 0.00 0.00 31.88 5.52
154 155 0.739112 GCAGGACTTCTTGAGCCGAG 60.739 60.000 0.00 0.00 0.00 4.63
159 160 0.459237 ACTTCTTGAGCCGAGATGCG 60.459 55.000 0.00 0.00 40.47 4.73
167 168 2.753966 GCCGAGATGCGTGCATGTT 61.754 57.895 12.81 0.00 36.70 2.71
179 180 0.809636 TGCATGTTATCCGACGGCAG 60.810 55.000 9.66 0.00 31.59 4.85
181 182 1.227556 ATGTTATCCGACGGCAGGC 60.228 57.895 9.66 0.10 0.00 4.85
182 183 1.966901 ATGTTATCCGACGGCAGGCA 61.967 55.000 9.66 6.27 0.00 4.75
184 185 3.088941 TTATCCGACGGCAGGCAGG 62.089 63.158 9.66 0.00 0.00 4.85
211 1422 1.810151 GCCGGAACTTGCTACAAATCA 59.190 47.619 5.05 0.00 0.00 2.57
213 1424 3.074412 CCGGAACTTGCTACAAATCAGT 58.926 45.455 0.00 0.00 0.00 3.41
214 1425 3.125316 CCGGAACTTGCTACAAATCAGTC 59.875 47.826 0.00 0.00 0.00 3.51
222 1433 2.607187 CTACAAATCAGTCGTTCGCCT 58.393 47.619 0.00 0.00 0.00 5.52
228 1439 5.815740 ACAAATCAGTCGTTCGCCTAATATT 59.184 36.000 0.00 0.00 0.00 1.28
229 1440 6.315393 ACAAATCAGTCGTTCGCCTAATATTT 59.685 34.615 0.00 0.00 0.00 1.40
231 1442 5.961395 TCAGTCGTTCGCCTAATATTTTC 57.039 39.130 0.00 0.00 0.00 2.29
232 1443 4.807304 TCAGTCGTTCGCCTAATATTTTCC 59.193 41.667 0.00 0.00 0.00 3.13
233 1444 3.800506 AGTCGTTCGCCTAATATTTTCCG 59.199 43.478 0.00 0.00 0.00 4.30
234 1445 3.798337 GTCGTTCGCCTAATATTTTCCGA 59.202 43.478 0.00 0.00 0.00 4.55
235 1446 4.268405 GTCGTTCGCCTAATATTTTCCGAA 59.732 41.667 10.65 10.65 33.05 4.30
236 1447 4.869297 TCGTTCGCCTAATATTTTCCGAAA 59.131 37.500 14.24 0.00 36.61 3.46
238 1449 6.037391 TCGTTCGCCTAATATTTTCCGAAAAT 59.963 34.615 20.18 20.18 43.19 1.82
239 1450 7.224362 TCGTTCGCCTAATATTTTCCGAAAATA 59.776 33.333 22.59 22.59 44.73 1.40
240 1451 7.851963 CGTTCGCCTAATATTTTCCGAAAATAA 59.148 33.333 23.65 11.97 44.07 1.40
241 1452 9.505995 GTTCGCCTAATATTTTCCGAAAATAAA 57.494 29.630 23.65 16.13 44.07 1.40
289 1500 8.831715 AAGGAACATAATGTTTTCATTTCACC 57.168 30.769 0.00 0.00 46.94 4.02
290 1501 8.193953 AGGAACATAATGTTTTCATTTCACCT 57.806 30.769 0.00 0.00 46.94 4.00
291 1502 8.306761 AGGAACATAATGTTTTCATTTCACCTC 58.693 33.333 0.00 0.00 46.94 3.85
292 1503 8.306761 GGAACATAATGTTTTCATTTCACCTCT 58.693 33.333 0.00 0.00 46.94 3.69
293 1504 9.696917 GAACATAATGTTTTCATTTCACCTCTT 57.303 29.630 0.00 0.00 46.94 2.85
298 1509 8.437360 AATGTTTTCATTTCACCTCTTTTTCC 57.563 30.769 0.00 0.00 46.94 3.13
299 1510 6.940739 TGTTTTCATTTCACCTCTTTTTCCA 58.059 32.000 0.00 0.00 0.00 3.53
300 1511 6.816140 TGTTTTCATTTCACCTCTTTTTCCAC 59.184 34.615 0.00 0.00 0.00 4.02
301 1512 5.529581 TTCATTTCACCTCTTTTTCCACC 57.470 39.130 0.00 0.00 0.00 4.61
302 1513 4.541705 TCATTTCACCTCTTTTTCCACCA 58.458 39.130 0.00 0.00 0.00 4.17
303 1514 5.147032 TCATTTCACCTCTTTTTCCACCAT 58.853 37.500 0.00 0.00 0.00 3.55
304 1515 5.243730 TCATTTCACCTCTTTTTCCACCATC 59.756 40.000 0.00 0.00 0.00 3.51
305 1516 3.154827 TCACCTCTTTTTCCACCATCC 57.845 47.619 0.00 0.00 0.00 3.51
306 1517 2.171003 CACCTCTTTTTCCACCATCCC 58.829 52.381 0.00 0.00 0.00 3.85
307 1518 2.073776 ACCTCTTTTTCCACCATCCCT 58.926 47.619 0.00 0.00 0.00 4.20
308 1519 2.450886 ACCTCTTTTTCCACCATCCCTT 59.549 45.455 0.00 0.00 0.00 3.95
309 1520 3.092301 CCTCTTTTTCCACCATCCCTTC 58.908 50.000 0.00 0.00 0.00 3.46
310 1521 2.749621 CTCTTTTTCCACCATCCCTTCG 59.250 50.000 0.00 0.00 0.00 3.79
311 1522 2.107552 TCTTTTTCCACCATCCCTTCGT 59.892 45.455 0.00 0.00 0.00 3.85
312 1523 2.194201 TTTTCCACCATCCCTTCGTC 57.806 50.000 0.00 0.00 0.00 4.20
313 1524 1.358152 TTTCCACCATCCCTTCGTCT 58.642 50.000 0.00 0.00 0.00 4.18
314 1525 2.241281 TTCCACCATCCCTTCGTCTA 57.759 50.000 0.00 0.00 0.00 2.59
315 1526 2.241281 TCCACCATCCCTTCGTCTAA 57.759 50.000 0.00 0.00 0.00 2.10
316 1527 2.759355 TCCACCATCCCTTCGTCTAAT 58.241 47.619 0.00 0.00 0.00 1.73
317 1528 3.918566 TCCACCATCCCTTCGTCTAATA 58.081 45.455 0.00 0.00 0.00 0.98
318 1529 4.489737 TCCACCATCCCTTCGTCTAATAT 58.510 43.478 0.00 0.00 0.00 1.28
319 1530 5.647230 TCCACCATCCCTTCGTCTAATATA 58.353 41.667 0.00 0.00 0.00 0.86
320 1531 6.261435 TCCACCATCCCTTCGTCTAATATAT 58.739 40.000 0.00 0.00 0.00 0.86
321 1532 6.154534 TCCACCATCCCTTCGTCTAATATATG 59.845 42.308 0.00 0.00 0.00 1.78
322 1533 6.154534 CCACCATCCCTTCGTCTAATATATGA 59.845 42.308 0.00 0.00 0.00 2.15
323 1534 7.147655 CCACCATCCCTTCGTCTAATATATGAT 60.148 40.741 0.00 0.00 0.00 2.45
324 1535 8.914011 CACCATCCCTTCGTCTAATATATGATA 58.086 37.037 0.00 0.00 0.00 2.15
325 1536 9.488762 ACCATCCCTTCGTCTAATATATGATAA 57.511 33.333 0.00 0.00 0.00 1.75
358 1569 9.959721 ATCTTAATTTACTTAGCTTCTGAACCA 57.040 29.630 0.00 0.00 0.00 3.67
359 1570 9.787435 TCTTAATTTACTTAGCTTCTGAACCAA 57.213 29.630 0.00 0.00 0.00 3.67
363 1574 9.914131 AATTTACTTAGCTTCTGAACCAAATTC 57.086 29.630 0.00 0.00 37.88 2.17
364 1575 8.691661 TTTACTTAGCTTCTGAACCAAATTCT 57.308 30.769 0.00 0.00 38.25 2.40
365 1576 9.787435 TTTACTTAGCTTCTGAACCAAATTCTA 57.213 29.630 0.00 0.00 38.25 2.10
366 1577 9.959721 TTACTTAGCTTCTGAACCAAATTCTAT 57.040 29.630 0.00 0.00 38.25 1.98
367 1578 8.870075 ACTTAGCTTCTGAACCAAATTCTATT 57.130 30.769 0.00 0.00 38.25 1.73
368 1579 9.301897 ACTTAGCTTCTGAACCAAATTCTATTT 57.698 29.630 0.00 0.00 38.25 1.40
370 1581 9.912634 TTAGCTTCTGAACCAAATTCTATTTTG 57.087 29.630 0.00 0.00 38.25 2.44
371 1582 8.181904 AGCTTCTGAACCAAATTCTATTTTGA 57.818 30.769 0.00 0.00 38.58 2.69
372 1583 8.810041 AGCTTCTGAACCAAATTCTATTTTGAT 58.190 29.630 0.00 0.00 38.58 2.57
373 1584 9.428097 GCTTCTGAACCAAATTCTATTTTGATT 57.572 29.630 0.00 0.00 38.58 2.57
468 1679 9.425893 CACATTATTATTGACAAGAAGCTAACG 57.574 33.333 1.31 0.00 0.00 3.18
469 1680 9.162764 ACATTATTATTGACAAGAAGCTAACGT 57.837 29.630 1.31 0.00 0.00 3.99
472 1683 9.642327 TTATTATTGACAAGAAGCTAACGTACA 57.358 29.630 1.31 0.00 0.00 2.90
473 1684 8.718102 ATTATTGACAAGAAGCTAACGTACAT 57.282 30.769 1.31 0.00 0.00 2.29
474 1685 9.811995 ATTATTGACAAGAAGCTAACGTACATA 57.188 29.630 1.31 0.00 0.00 2.29
475 1686 7.757097 ATTGACAAGAAGCTAACGTACATAG 57.243 36.000 0.00 0.00 0.00 2.23
476 1687 6.505044 TGACAAGAAGCTAACGTACATAGA 57.495 37.500 6.83 0.00 0.00 1.98
477 1688 6.916440 TGACAAGAAGCTAACGTACATAGAA 58.084 36.000 6.83 0.00 0.00 2.10
478 1689 7.544622 TGACAAGAAGCTAACGTACATAGAAT 58.455 34.615 6.83 0.00 0.00 2.40
479 1690 8.680001 TGACAAGAAGCTAACGTACATAGAATA 58.320 33.333 6.83 0.00 0.00 1.75
480 1691 9.680315 GACAAGAAGCTAACGTACATAGAATAT 57.320 33.333 6.83 0.00 0.00 1.28
506 1717 3.353029 CGTCACAACGCATGGGCA 61.353 61.111 10.10 0.00 42.82 5.36
507 1718 2.689785 CGTCACAACGCATGGGCAT 61.690 57.895 10.10 0.00 42.82 4.40
508 1719 1.586028 GTCACAACGCATGGGCATT 59.414 52.632 10.10 0.00 41.24 3.56
511 1722 4.992515 CAACGCATGGGCATTGTT 57.007 50.000 10.10 0.00 38.34 2.83
512 1723 2.740668 CAACGCATGGGCATTGTTC 58.259 52.632 10.10 0.00 38.34 3.18
513 1724 0.244450 CAACGCATGGGCATTGTTCT 59.756 50.000 10.10 0.00 38.34 3.01
514 1725 1.472082 CAACGCATGGGCATTGTTCTA 59.528 47.619 10.10 0.00 38.34 2.10
515 1726 1.382522 ACGCATGGGCATTGTTCTAG 58.617 50.000 10.10 0.00 41.24 2.43
516 1727 1.340017 ACGCATGGGCATTGTTCTAGT 60.340 47.619 10.10 0.00 41.24 2.57
517 1728 2.093181 ACGCATGGGCATTGTTCTAGTA 60.093 45.455 10.10 0.00 41.24 1.82
518 1729 3.141398 CGCATGGGCATTGTTCTAGTAT 58.859 45.455 0.00 0.00 41.24 2.12
519 1730 4.202315 ACGCATGGGCATTGTTCTAGTATA 60.202 41.667 10.10 0.00 41.24 1.47
520 1731 4.937620 CGCATGGGCATTGTTCTAGTATAT 59.062 41.667 0.00 0.00 41.24 0.86
521 1732 5.063944 CGCATGGGCATTGTTCTAGTATATC 59.936 44.000 0.00 0.00 41.24 1.63
522 1733 6.176183 GCATGGGCATTGTTCTAGTATATCT 58.824 40.000 0.00 0.00 40.72 1.98
523 1734 7.331026 GCATGGGCATTGTTCTAGTATATCTA 58.669 38.462 0.00 0.00 40.72 1.98
524 1735 7.824289 GCATGGGCATTGTTCTAGTATATCTAA 59.176 37.037 0.00 0.00 40.72 2.10
525 1736 9.725019 CATGGGCATTGTTCTAGTATATCTAAA 57.275 33.333 0.00 0.00 0.00 1.85
527 1738 9.778741 TGGGCATTGTTCTAGTATATCTAAAAG 57.221 33.333 0.00 0.00 0.00 2.27
528 1739 9.780186 GGGCATTGTTCTAGTATATCTAAAAGT 57.220 33.333 0.00 0.00 0.00 2.66
533 1744 9.609346 TTGTTCTAGTATATCTAAAAGTTGGGC 57.391 33.333 0.00 0.00 0.00 5.36
534 1745 8.764558 TGTTCTAGTATATCTAAAAGTTGGGCA 58.235 33.333 0.00 0.00 0.00 5.36
535 1746 9.262358 GTTCTAGTATATCTAAAAGTTGGGCAG 57.738 37.037 0.00 0.00 0.00 4.85
536 1747 8.548880 TCTAGTATATCTAAAAGTTGGGCAGT 57.451 34.615 0.00 0.00 0.00 4.40
537 1748 8.989131 TCTAGTATATCTAAAAGTTGGGCAGTT 58.011 33.333 0.00 0.00 0.00 3.16
573 1785 8.897752 GTTCACCTTTTAGATGCTTAGAATGAT 58.102 33.333 0.00 0.00 0.00 2.45
680 1894 1.321148 CAACAGCAGCAAACAACAACG 59.679 47.619 0.00 0.00 0.00 4.10
736 1951 9.627123 ATTATCCGAAGAATACTGAAAAATCCA 57.373 29.630 0.00 0.00 0.00 3.41
755 1970 4.075682 TCCACACCAAGAAATATCGCAAA 58.924 39.130 0.00 0.00 0.00 3.68
770 1985 1.603802 CGCAAATATGGAATGGTCGCT 59.396 47.619 0.00 0.00 0.00 4.93
860 2108 1.400142 CGTTTTCACTGTCACTGGCAA 59.600 47.619 0.00 0.00 0.00 4.52
864 2112 1.152984 CACTGTCACTGGCAACCCA 60.153 57.895 0.00 0.00 39.32 4.51
914 2162 1.468908 CCTGACAGACACATCTCGAGC 60.469 57.143 7.81 0.00 30.42 5.03
922 2170 1.138459 ACATCTCGAGCGCAGACAG 59.862 57.895 11.47 3.10 0.00 3.51
933 2181 1.714794 CGCAGACAGTTTACCAGAGG 58.285 55.000 0.00 0.00 0.00 3.69
948 2223 2.233271 CAGAGGGAACAGTGCACATTT 58.767 47.619 21.04 11.29 0.00 2.32
1496 2771 4.514781 TGTGCAGTAGTACTACACAAGG 57.485 45.455 27.00 16.44 46.27 3.61
1497 2772 4.146564 TGTGCAGTAGTACTACACAAGGA 58.853 43.478 27.00 16.96 46.27 3.36
1498 2773 4.585581 TGTGCAGTAGTACTACACAAGGAA 59.414 41.667 27.00 9.49 46.27 3.36
1499 2774 5.069383 TGTGCAGTAGTACTACACAAGGAAA 59.931 40.000 27.00 13.36 46.27 3.13
1501 2776 7.039574 TGTGCAGTAGTACTACACAAGGAAATA 60.040 37.037 27.00 7.65 46.27 1.40
1502 2777 7.275123 GTGCAGTAGTACTACACAAGGAAATAC 59.725 40.741 29.87 12.31 41.11 1.89
1503 2778 7.177921 TGCAGTAGTACTACACAAGGAAATACT 59.822 37.037 29.87 7.89 38.48 2.12
1504 2779 7.701501 GCAGTAGTACTACACAAGGAAATACTC 59.298 40.741 29.87 2.39 38.48 2.59
1505 2780 8.189460 CAGTAGTACTACACAAGGAAATACTCC 58.811 40.741 29.87 2.04 40.38 3.85
1506 2781 6.541934 AGTACTACACAAGGAAATACTCCC 57.458 41.667 0.00 0.00 46.81 4.30
1507 2782 6.262207 AGTACTACACAAGGAAATACTCCCT 58.738 40.000 0.00 0.00 46.81 4.20
1508 2783 5.678955 ACTACACAAGGAAATACTCCCTC 57.321 43.478 0.00 0.00 46.81 4.30
1509 2784 4.470304 ACTACACAAGGAAATACTCCCTCC 59.530 45.833 0.00 0.00 46.81 4.30
1510 2785 3.256704 ACACAAGGAAATACTCCCTCCA 58.743 45.455 0.00 0.00 46.81 3.86
1511 2786 3.852578 ACACAAGGAAATACTCCCTCCAT 59.147 43.478 0.00 0.00 46.81 3.41
1512 2787 4.292306 ACACAAGGAAATACTCCCTCCATT 59.708 41.667 0.00 0.00 46.81 3.16
1513 2788 5.222337 ACACAAGGAAATACTCCCTCCATTT 60.222 40.000 0.00 0.00 46.81 2.32
1514 2789 5.358160 CACAAGGAAATACTCCCTCCATTTC 59.642 44.000 0.00 0.00 46.81 2.17
1515 2790 5.254032 ACAAGGAAATACTCCCTCCATTTCT 59.746 40.000 6.31 0.00 46.81 2.52
1516 2791 6.447084 ACAAGGAAATACTCCCTCCATTTCTA 59.553 38.462 6.31 0.00 46.81 2.10
1517 2792 7.036863 ACAAGGAAATACTCCCTCCATTTCTAA 60.037 37.037 6.31 0.00 46.81 2.10
1518 2793 7.525158 AGGAAATACTCCCTCCATTTCTAAA 57.475 36.000 6.31 0.00 46.81 1.85
1519 2794 8.119062 AGGAAATACTCCCTCCATTTCTAAAT 57.881 34.615 6.31 0.00 46.81 1.40
1520 2795 9.237706 AGGAAATACTCCCTCCATTTCTAAATA 57.762 33.333 6.31 0.00 46.81 1.40
1527 2802 9.453830 ACTCCCTCCATTTCTAAATATAAGTCT 57.546 33.333 0.00 0.00 0.00 3.24
1548 2823 9.575783 AAGTCTTTTAGAGATTTCACTATCGAC 57.424 33.333 0.00 0.00 36.61 4.20
1549 2824 8.962679 AGTCTTTTAGAGATTTCACTATCGACT 58.037 33.333 0.00 0.00 36.61 4.18
1554 2829 6.870971 AGAGATTTCACTATCGACTACTCC 57.129 41.667 0.00 0.00 0.00 3.85
1555 2830 5.766174 AGAGATTTCACTATCGACTACTCCC 59.234 44.000 0.00 0.00 0.00 4.30
1556 2831 5.697067 AGATTTCACTATCGACTACTCCCT 58.303 41.667 0.00 0.00 0.00 4.20
1557 2832 5.766174 AGATTTCACTATCGACTACTCCCTC 59.234 44.000 0.00 0.00 0.00 4.30
1558 2833 3.488778 TCACTATCGACTACTCCCTCC 57.511 52.381 0.00 0.00 0.00 4.30
1559 2834 2.144730 CACTATCGACTACTCCCTCCG 58.855 57.143 0.00 0.00 0.00 4.63
1560 2835 1.767681 ACTATCGACTACTCCCTCCGT 59.232 52.381 0.00 0.00 0.00 4.69
1561 2836 2.172293 ACTATCGACTACTCCCTCCGTT 59.828 50.000 0.00 0.00 0.00 4.44
1562 2837 1.677942 ATCGACTACTCCCTCCGTTC 58.322 55.000 0.00 0.00 0.00 3.95
1563 2838 0.393537 TCGACTACTCCCTCCGTTCC 60.394 60.000 0.00 0.00 0.00 3.62
1564 2839 0.394080 CGACTACTCCCTCCGTTCCT 60.394 60.000 0.00 0.00 0.00 3.36
1565 2840 1.849977 GACTACTCCCTCCGTTCCTT 58.150 55.000 0.00 0.00 0.00 3.36
1566 2841 2.177734 GACTACTCCCTCCGTTCCTTT 58.822 52.381 0.00 0.00 0.00 3.11
1567 2842 2.566279 GACTACTCCCTCCGTTCCTTTT 59.434 50.000 0.00 0.00 0.00 2.27
1568 2843 2.977580 ACTACTCCCTCCGTTCCTTTTT 59.022 45.455 0.00 0.00 0.00 1.94
1598 2873 9.944663 CTTTTGAAGTTTACTACATACAAAGCA 57.055 29.630 0.00 0.00 32.01 3.91
1612 2887 8.986477 ACATACAAAGCAAAATAAGTGAATCC 57.014 30.769 0.00 0.00 0.00 3.01
1613 2888 8.584157 ACATACAAAGCAAAATAAGTGAATCCA 58.416 29.630 0.00 0.00 0.00 3.41
1614 2889 8.863049 CATACAAAGCAAAATAAGTGAATCCAC 58.137 33.333 0.00 0.00 43.50 4.02
1615 2890 6.815089 ACAAAGCAAAATAAGTGAATCCACA 58.185 32.000 0.00 0.00 45.54 4.17
1616 2891 6.701400 ACAAAGCAAAATAAGTGAATCCACAC 59.299 34.615 0.00 0.00 45.54 3.82
1629 2904 8.723942 AGTGAATCCACACTCTAAAATATGTC 57.276 34.615 0.00 0.00 46.36 3.06
1630 2905 8.543774 AGTGAATCCACACTCTAAAATATGTCT 58.456 33.333 0.00 0.00 46.36 3.41
1631 2906 9.817809 GTGAATCCACACTCTAAAATATGTCTA 57.182 33.333 0.00 0.00 42.72 2.59
1659 2934 7.476540 ACATCTGTATGTAGTTTGTAGTGGA 57.523 36.000 0.00 0.00 44.66 4.02
1660 2935 7.903145 ACATCTGTATGTAGTTTGTAGTGGAA 58.097 34.615 0.00 0.00 44.66 3.53
1661 2936 8.540388 ACATCTGTATGTAGTTTGTAGTGGAAT 58.460 33.333 0.00 0.00 44.66 3.01
1662 2937 9.035607 CATCTGTATGTAGTTTGTAGTGGAATC 57.964 37.037 0.00 0.00 0.00 2.52
1663 2938 8.362464 TCTGTATGTAGTTTGTAGTGGAATCT 57.638 34.615 0.00 0.00 0.00 2.40
1664 2939 8.467598 TCTGTATGTAGTTTGTAGTGGAATCTC 58.532 37.037 0.00 0.00 0.00 2.75
1665 2940 8.362464 TGTATGTAGTTTGTAGTGGAATCTCT 57.638 34.615 0.00 0.00 0.00 3.10
1666 2941 9.470399 TGTATGTAGTTTGTAGTGGAATCTCTA 57.530 33.333 0.00 0.00 0.00 2.43
1673 2948 9.274206 AGTTTGTAGTGGAATCTCTAAAAAGAC 57.726 33.333 3.22 0.00 30.99 3.01
1674 2949 9.274206 GTTTGTAGTGGAATCTCTAAAAAGACT 57.726 33.333 3.22 0.00 30.99 3.24
1675 2950 9.847224 TTTGTAGTGGAATCTCTAAAAAGACTT 57.153 29.630 0.00 0.00 28.58 3.01
1677 2952 9.924650 TGTAGTGGAATCTCTAAAAAGACTTAC 57.075 33.333 0.00 0.00 0.00 2.34
1678 2953 9.924650 GTAGTGGAATCTCTAAAAAGACTTACA 57.075 33.333 0.00 0.00 0.00 2.41
1683 2958 9.974750 GGAATCTCTAAAAAGACTTACATTTCG 57.025 33.333 0.00 0.00 0.00 3.46
1684 2959 9.974750 GAATCTCTAAAAAGACTTACATTTCGG 57.025 33.333 0.00 0.00 0.00 4.30
1685 2960 9.720769 AATCTCTAAAAAGACTTACATTTCGGA 57.279 29.630 0.00 0.00 0.00 4.55
1686 2961 9.720769 ATCTCTAAAAAGACTTACATTTCGGAA 57.279 29.630 0.00 0.00 0.00 4.30
1687 2962 8.985805 TCTCTAAAAAGACTTACATTTCGGAAC 58.014 33.333 0.00 0.00 0.00 3.62
1703 2978 1.684248 GGAACGGAGGGAGTACTAGCA 60.684 57.143 0.00 0.00 0.00 3.49
1706 2981 1.284198 ACGGAGGGAGTACTAGCAAGA 59.716 52.381 0.00 0.00 0.00 3.02
1758 3036 7.358066 CGATCATGATAGCTTGTTATTTTGCT 58.642 34.615 8.54 0.00 39.30 3.91
1764 3042 8.657074 TGATAGCTTGTTATTTTGCTATACGT 57.343 30.769 6.36 0.00 45.29 3.57
1769 3048 6.607735 TTGTTATTTTGCTATACGTAGGGC 57.392 37.500 13.43 13.43 0.00 5.19
1845 3125 8.865420 ACTTCTTTTTCTTATAGAAAGGACCC 57.135 34.615 2.52 0.00 44.14 4.46
1846 3126 7.889073 ACTTCTTTTTCTTATAGAAAGGACCCC 59.111 37.037 2.52 0.00 44.14 4.95
1847 3127 6.412214 TCTTTTTCTTATAGAAAGGACCCCG 58.588 40.000 2.52 0.00 44.14 5.73
1848 3128 6.214005 TCTTTTTCTTATAGAAAGGACCCCGA 59.786 38.462 2.52 0.00 44.14 5.14
1849 3129 6.570654 TTTTCTTATAGAAAGGACCCCGAT 57.429 37.500 2.52 0.00 44.14 4.18
1850 3130 7.679732 TTTTCTTATAGAAAGGACCCCGATA 57.320 36.000 2.52 0.00 44.14 2.92
1851 3131 7.867160 TTTCTTATAGAAAGGACCCCGATAT 57.133 36.000 0.00 0.00 39.13 1.63
1852 3132 7.867160 TTCTTATAGAAAGGACCCCGATATT 57.133 36.000 0.00 0.00 29.99 1.28
1853 3133 7.477945 TCTTATAGAAAGGACCCCGATATTC 57.522 40.000 0.00 0.00 0.00 1.75
1854 3134 7.014449 TCTTATAGAAAGGACCCCGATATTCA 58.986 38.462 0.00 0.00 0.00 2.57
1855 3135 7.511371 TCTTATAGAAAGGACCCCGATATTCAA 59.489 37.037 0.00 0.00 0.00 2.69
1856 3136 4.855298 AGAAAGGACCCCGATATTCAAA 57.145 40.909 0.00 0.00 0.00 2.69
1857 3137 4.524053 AGAAAGGACCCCGATATTCAAAC 58.476 43.478 0.00 0.00 0.00 2.93
1858 3138 4.018779 AGAAAGGACCCCGATATTCAAACA 60.019 41.667 0.00 0.00 0.00 2.83
1859 3139 3.277142 AGGACCCCGATATTCAAACAC 57.723 47.619 0.00 0.00 0.00 3.32
1934 3214 7.319142 CTTTTGCAAAAGAAAAGGATTCCAA 57.681 32.000 37.46 7.40 46.39 3.53
1941 3221 8.876790 GCAAAAGAAAAGGATTCCAATAATCAG 58.123 33.333 5.29 0.00 0.00 2.90
1943 3223 8.899887 AAAGAAAAGGATTCCAATAATCAGGA 57.100 30.769 5.29 0.00 0.00 3.86
1955 3235 9.919416 TTCCAATAATCAGGAAAGATCATTACA 57.081 29.630 0.00 0.00 40.76 2.41
1985 3266 2.674852 GCAGAGAGTGCGAATTTCATCA 59.325 45.455 0.00 0.00 43.99 3.07
1990 3271 2.352960 GAGTGCGAATTTCATCAGGTCC 59.647 50.000 0.00 0.00 0.00 4.46
1995 3276 4.220382 TGCGAATTTCATCAGGTCCATTTT 59.780 37.500 0.00 0.00 0.00 1.82
1996 3277 5.417266 TGCGAATTTCATCAGGTCCATTTTA 59.583 36.000 0.00 0.00 0.00 1.52
2005 3286 4.780815 TCAGGTCCATTTTACAGCCATAG 58.219 43.478 0.00 0.00 0.00 2.23
2009 3290 4.199310 GTCCATTTTACAGCCATAGAGCA 58.801 43.478 0.00 0.00 34.23 4.26
2014 3295 1.489481 TACAGCCATAGAGCAGTGCT 58.511 50.000 19.86 19.86 43.88 4.40
2019 3300 0.829333 CCATAGAGCAGTGCTGAGGT 59.171 55.000 25.35 6.74 39.88 3.85
2033 3314 2.391926 TGAGGTACAGAGTGACCCAA 57.608 50.000 0.00 0.00 36.27 4.12
2034 3315 2.248248 TGAGGTACAGAGTGACCCAAG 58.752 52.381 0.00 0.00 36.27 3.61
2035 3316 2.249139 GAGGTACAGAGTGACCCAAGT 58.751 52.381 0.00 0.00 36.27 3.16
2036 3317 1.971357 AGGTACAGAGTGACCCAAGTG 59.029 52.381 0.00 0.00 36.27 3.16
2037 3318 1.692519 GGTACAGAGTGACCCAAGTGT 59.307 52.381 0.00 0.00 0.00 3.55
2038 3319 2.548067 GGTACAGAGTGACCCAAGTGTG 60.548 54.545 0.00 0.00 0.00 3.82
2039 3320 0.179045 ACAGAGTGACCCAAGTGTGC 60.179 55.000 0.00 0.00 0.00 4.57
2040 3321 0.179048 CAGAGTGACCCAAGTGTGCA 60.179 55.000 0.00 0.00 0.00 4.57
2041 3322 0.546122 AGAGTGACCCAAGTGTGCAA 59.454 50.000 0.00 0.00 0.00 4.08
2042 3323 0.947244 GAGTGACCCAAGTGTGCAAG 59.053 55.000 0.00 0.00 0.00 4.01
2043 3324 0.255890 AGTGACCCAAGTGTGCAAGT 59.744 50.000 0.00 0.00 0.00 3.16
2044 3325 0.381801 GTGACCCAAGTGTGCAAGTG 59.618 55.000 0.00 0.00 0.00 3.16
2045 3326 0.751277 TGACCCAAGTGTGCAAGTGG 60.751 55.000 0.00 0.00 0.00 4.00
2046 3327 0.465460 GACCCAAGTGTGCAAGTGGA 60.465 55.000 7.58 0.00 32.54 4.02
2047 3328 0.185901 ACCCAAGTGTGCAAGTGGAT 59.814 50.000 7.58 0.00 32.54 3.41
2048 3329 0.599558 CCCAAGTGTGCAAGTGGATG 59.400 55.000 7.58 0.00 32.54 3.51
2049 3330 0.599558 CCAAGTGTGCAAGTGGATGG 59.400 55.000 0.00 0.00 32.54 3.51
2050 3331 0.038892 CAAGTGTGCAAGTGGATGGC 60.039 55.000 0.00 0.00 0.00 4.40
2051 3332 0.178981 AAGTGTGCAAGTGGATGGCT 60.179 50.000 0.00 0.00 0.00 4.75
2052 3333 0.892358 AGTGTGCAAGTGGATGGCTG 60.892 55.000 0.00 0.00 0.00 4.85
2053 3334 1.151221 TGTGCAAGTGGATGGCTGT 59.849 52.632 0.00 0.00 0.00 4.40
2054 3335 0.399833 TGTGCAAGTGGATGGCTGTA 59.600 50.000 0.00 0.00 0.00 2.74
2055 3336 1.004628 TGTGCAAGTGGATGGCTGTAT 59.995 47.619 0.00 0.00 0.00 2.29
2056 3337 2.238395 TGTGCAAGTGGATGGCTGTATA 59.762 45.455 0.00 0.00 0.00 1.47
2057 3338 3.278574 GTGCAAGTGGATGGCTGTATAA 58.721 45.455 0.00 0.00 0.00 0.98
2058 3339 3.694072 GTGCAAGTGGATGGCTGTATAAA 59.306 43.478 0.00 0.00 0.00 1.40
2059 3340 3.947196 TGCAAGTGGATGGCTGTATAAAG 59.053 43.478 0.00 0.00 0.00 1.85
2060 3341 3.947834 GCAAGTGGATGGCTGTATAAAGT 59.052 43.478 0.00 0.00 0.00 2.66
2061 3342 4.399303 GCAAGTGGATGGCTGTATAAAGTT 59.601 41.667 0.00 0.00 0.00 2.66
2062 3343 5.105756 GCAAGTGGATGGCTGTATAAAGTTT 60.106 40.000 0.00 0.00 0.00 2.66
2063 3344 6.094881 GCAAGTGGATGGCTGTATAAAGTTTA 59.905 38.462 0.00 0.00 0.00 2.01
2064 3345 7.201821 GCAAGTGGATGGCTGTATAAAGTTTAT 60.202 37.037 12.61 12.61 0.00 1.40
2065 3346 7.807977 AGTGGATGGCTGTATAAAGTTTATG 57.192 36.000 16.81 3.26 0.00 1.90
2066 3347 7.573710 AGTGGATGGCTGTATAAAGTTTATGA 58.426 34.615 16.81 4.21 0.00 2.15
2067 3348 7.716998 AGTGGATGGCTGTATAAAGTTTATGAG 59.283 37.037 16.81 13.05 0.00 2.90
2068 3349 6.998074 TGGATGGCTGTATAAAGTTTATGAGG 59.002 38.462 16.81 8.24 0.00 3.86
2069 3350 6.431234 GGATGGCTGTATAAAGTTTATGAGGG 59.569 42.308 16.81 6.80 0.00 4.30
2070 3351 5.130350 TGGCTGTATAAAGTTTATGAGGGC 58.870 41.667 16.81 16.27 0.00 5.19
2071 3352 4.213482 GGCTGTATAAAGTTTATGAGGGCG 59.787 45.833 16.81 2.79 0.00 6.13
2072 3353 4.814771 GCTGTATAAAGTTTATGAGGGCGT 59.185 41.667 16.81 0.00 0.00 5.68
2073 3354 5.277345 GCTGTATAAAGTTTATGAGGGCGTG 60.277 44.000 16.81 2.16 0.00 5.34
2074 3355 5.120399 TGTATAAAGTTTATGAGGGCGTGG 58.880 41.667 16.81 0.00 0.00 4.94
2075 3356 2.871096 AAAGTTTATGAGGGCGTGGA 57.129 45.000 0.00 0.00 0.00 4.02
2076 3357 3.366052 AAAGTTTATGAGGGCGTGGAT 57.634 42.857 0.00 0.00 0.00 3.41
2077 3358 2.332063 AGTTTATGAGGGCGTGGATG 57.668 50.000 0.00 0.00 0.00 3.51
2078 3359 1.559682 AGTTTATGAGGGCGTGGATGT 59.440 47.619 0.00 0.00 0.00 3.06
2079 3360 2.026262 AGTTTATGAGGGCGTGGATGTT 60.026 45.455 0.00 0.00 0.00 2.71
2080 3361 2.036958 TTATGAGGGCGTGGATGTTG 57.963 50.000 0.00 0.00 0.00 3.33
2081 3362 0.908910 TATGAGGGCGTGGATGTTGT 59.091 50.000 0.00 0.00 0.00 3.32
2082 3363 0.038166 ATGAGGGCGTGGATGTTGTT 59.962 50.000 0.00 0.00 0.00 2.83
2083 3364 0.605319 TGAGGGCGTGGATGTTGTTC 60.605 55.000 0.00 0.00 0.00 3.18
2084 3365 0.321653 GAGGGCGTGGATGTTGTTCT 60.322 55.000 0.00 0.00 0.00 3.01
2085 3366 0.321653 AGGGCGTGGATGTTGTTCTC 60.322 55.000 0.00 0.00 0.00 2.87
2086 3367 0.321653 GGGCGTGGATGTTGTTCTCT 60.322 55.000 0.00 0.00 0.00 3.10
2087 3368 1.523758 GGCGTGGATGTTGTTCTCTT 58.476 50.000 0.00 0.00 0.00 2.85
2088 3369 1.197721 GGCGTGGATGTTGTTCTCTTG 59.802 52.381 0.00 0.00 0.00 3.02
2089 3370 1.400242 GCGTGGATGTTGTTCTCTTGC 60.400 52.381 0.00 0.00 0.00 4.01
2090 3371 1.197721 CGTGGATGTTGTTCTCTTGCC 59.802 52.381 0.00 0.00 0.00 4.52
2091 3372 1.541588 GTGGATGTTGTTCTCTTGCCC 59.458 52.381 0.00 0.00 0.00 5.36
2092 3373 1.144708 TGGATGTTGTTCTCTTGCCCA 59.855 47.619 0.00 0.00 0.00 5.36
2093 3374 2.238521 GGATGTTGTTCTCTTGCCCAA 58.761 47.619 0.00 0.00 0.00 4.12
2094 3375 2.627699 GGATGTTGTTCTCTTGCCCAAA 59.372 45.455 0.00 0.00 0.00 3.28
2095 3376 3.069443 GGATGTTGTTCTCTTGCCCAAAA 59.931 43.478 0.00 0.00 0.00 2.44
2096 3377 4.442753 GGATGTTGTTCTCTTGCCCAAAAA 60.443 41.667 0.00 0.00 0.00 1.94
2097 3378 4.751767 TGTTGTTCTCTTGCCCAAAAAT 57.248 36.364 0.00 0.00 0.00 1.82
2098 3379 5.096443 TGTTGTTCTCTTGCCCAAAAATT 57.904 34.783 0.00 0.00 0.00 1.82
2131 3412 0.734889 CGATGCAATCACCTTGACCC 59.265 55.000 0.00 0.00 45.97 4.46
2135 3416 1.682849 CAATCACCTTGACCCCGGA 59.317 57.895 0.73 0.00 36.97 5.14
2198 3480 0.714180 TGAAGTACCTAGGCCTCCCA 59.286 55.000 9.68 4.58 0.00 4.37
2270 3552 1.213537 CGGCAGGCAAATTGGTCAG 59.786 57.895 0.00 0.00 0.00 3.51
2276 3558 0.320683 GGCAAATTGGTCAGTTGGGC 60.321 55.000 0.00 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.067601 GTCAATTTTCGTCCCACCACTTT 59.932 43.478 0.00 0.00 0.00 2.66
1 2 2.621526 GTCAATTTTCGTCCCACCACTT 59.378 45.455 0.00 0.00 0.00 3.16
2 3 2.227194 GTCAATTTTCGTCCCACCACT 58.773 47.619 0.00 0.00 0.00 4.00
3 4 1.268625 GGTCAATTTTCGTCCCACCAC 59.731 52.381 0.00 0.00 0.00 4.16
4 5 1.611519 GGTCAATTTTCGTCCCACCA 58.388 50.000 0.00 0.00 0.00 4.17
5 6 0.519961 CGGTCAATTTTCGTCCCACC 59.480 55.000 0.00 0.00 0.00 4.61
6 7 0.519961 CCGGTCAATTTTCGTCCCAC 59.480 55.000 0.00 0.00 0.00 4.61
7 8 1.238625 GCCGGTCAATTTTCGTCCCA 61.239 55.000 1.90 0.00 0.00 4.37
8 9 1.504900 GCCGGTCAATTTTCGTCCC 59.495 57.895 1.90 0.00 0.00 4.46
9 10 1.133869 CGCCGGTCAATTTTCGTCC 59.866 57.895 1.90 0.00 0.00 4.79
10 11 1.133869 CCGCCGGTCAATTTTCGTC 59.866 57.895 1.90 0.00 0.00 4.20
11 12 1.296056 CTCCGCCGGTCAATTTTCGT 61.296 55.000 1.63 0.00 0.00 3.85
13 14 0.446616 GTCTCCGCCGGTCAATTTTC 59.553 55.000 1.63 0.00 0.00 2.29
14 15 0.036306 AGTCTCCGCCGGTCAATTTT 59.964 50.000 1.63 0.00 0.00 1.82
15 16 0.899720 TAGTCTCCGCCGGTCAATTT 59.100 50.000 1.63 0.00 0.00 1.82
16 17 0.175073 GTAGTCTCCGCCGGTCAATT 59.825 55.000 1.63 0.00 0.00 2.32
17 18 1.673808 GGTAGTCTCCGCCGGTCAAT 61.674 60.000 1.63 0.00 0.00 2.57
18 19 2.345760 GGTAGTCTCCGCCGGTCAA 61.346 63.158 1.63 0.00 0.00 3.18
19 20 2.753043 GGTAGTCTCCGCCGGTCA 60.753 66.667 1.63 0.00 0.00 4.02
20 21 2.345760 TTGGTAGTCTCCGCCGGTC 61.346 63.158 1.63 0.00 0.00 4.79
21 22 2.283388 TTGGTAGTCTCCGCCGGT 60.283 61.111 1.63 0.00 0.00 5.28
22 23 2.183555 GTTGGTAGTCTCCGCCGG 59.816 66.667 0.00 0.00 0.00 6.13
23 24 1.153823 CAGTTGGTAGTCTCCGCCG 60.154 63.158 0.00 0.00 0.00 6.46
24 25 1.448013 GCAGTTGGTAGTCTCCGCC 60.448 63.158 0.00 0.00 0.00 6.13
25 26 0.737715 CAGCAGTTGGTAGTCTCCGC 60.738 60.000 0.00 0.00 0.00 5.54
26 27 0.737715 GCAGCAGTTGGTAGTCTCCG 60.738 60.000 0.00 0.00 0.00 4.63
27 28 0.321671 TGCAGCAGTTGGTAGTCTCC 59.678 55.000 0.00 0.00 0.00 3.71
28 29 2.393271 ATGCAGCAGTTGGTAGTCTC 57.607 50.000 0.00 0.00 0.00 3.36
29 30 2.867109 AATGCAGCAGTTGGTAGTCT 57.133 45.000 0.00 0.00 0.00 3.24
30 31 2.939103 CCTAATGCAGCAGTTGGTAGTC 59.061 50.000 14.33 0.00 0.00 2.59
31 32 2.571653 TCCTAATGCAGCAGTTGGTAGT 59.428 45.455 20.44 0.00 0.00 2.73
32 33 3.201290 CTCCTAATGCAGCAGTTGGTAG 58.799 50.000 20.44 13.46 0.00 3.18
33 34 2.571653 ACTCCTAATGCAGCAGTTGGTA 59.428 45.455 20.44 8.69 0.00 3.25
34 35 1.352352 ACTCCTAATGCAGCAGTTGGT 59.648 47.619 20.44 2.28 0.00 3.67
35 36 2.119801 ACTCCTAATGCAGCAGTTGG 57.880 50.000 16.14 16.14 0.00 3.77
36 37 4.937620 TCTTTACTCCTAATGCAGCAGTTG 59.062 41.667 0.00 0.00 0.00 3.16
37 38 5.165961 TCTTTACTCCTAATGCAGCAGTT 57.834 39.130 0.00 0.00 0.00 3.16
38 39 4.826274 TCTTTACTCCTAATGCAGCAGT 57.174 40.909 0.00 0.00 0.00 4.40
39 40 7.497249 ACTTTATCTTTACTCCTAATGCAGCAG 59.503 37.037 0.00 0.00 0.00 4.24
40 41 7.280876 CACTTTATCTTTACTCCTAATGCAGCA 59.719 37.037 0.00 0.00 0.00 4.41
41 42 7.254932 CCACTTTATCTTTACTCCTAATGCAGC 60.255 40.741 0.00 0.00 0.00 5.25
42 43 7.254932 GCCACTTTATCTTTACTCCTAATGCAG 60.255 40.741 0.00 0.00 0.00 4.41
43 44 6.542370 GCCACTTTATCTTTACTCCTAATGCA 59.458 38.462 0.00 0.00 0.00 3.96
44 45 6.017026 GGCCACTTTATCTTTACTCCTAATGC 60.017 42.308 0.00 0.00 0.00 3.56
45 46 7.283329 AGGCCACTTTATCTTTACTCCTAATG 58.717 38.462 5.01 0.00 0.00 1.90
46 47 7.453141 AGGCCACTTTATCTTTACTCCTAAT 57.547 36.000 5.01 0.00 0.00 1.73
47 48 6.886178 AGGCCACTTTATCTTTACTCCTAA 57.114 37.500 5.01 0.00 0.00 2.69
48 49 6.214819 ACAAGGCCACTTTATCTTTACTCCTA 59.785 38.462 5.01 0.00 33.81 2.94
49 50 5.014228 ACAAGGCCACTTTATCTTTACTCCT 59.986 40.000 5.01 0.00 33.81 3.69
50 51 5.254115 ACAAGGCCACTTTATCTTTACTCC 58.746 41.667 5.01 0.00 33.81 3.85
51 52 6.819397 AACAAGGCCACTTTATCTTTACTC 57.181 37.500 5.01 0.00 33.81 2.59
52 53 8.700439 TTAAACAAGGCCACTTTATCTTTACT 57.300 30.769 5.01 0.00 33.81 2.24
53 54 9.923143 AATTAAACAAGGCCACTTTATCTTTAC 57.077 29.630 5.01 0.00 33.81 2.01
55 56 9.923143 GTAATTAAACAAGGCCACTTTATCTTT 57.077 29.630 5.01 1.63 33.81 2.52
56 57 9.084533 TGTAATTAAACAAGGCCACTTTATCTT 57.915 29.630 5.01 3.62 33.81 2.40
57 58 8.644374 TGTAATTAAACAAGGCCACTTTATCT 57.356 30.769 5.01 0.00 33.81 1.98
58 59 9.869757 ATTGTAATTAAACAAGGCCACTTTATC 57.130 29.630 5.01 0.00 42.33 1.75
61 62 7.817478 GCTATTGTAATTAAACAAGGCCACTTT 59.183 33.333 5.01 1.14 42.33 2.66
62 63 7.039363 TGCTATTGTAATTAAACAAGGCCACTT 60.039 33.333 5.01 0.00 42.33 3.16
63 64 6.435904 TGCTATTGTAATTAAACAAGGCCACT 59.564 34.615 5.01 0.00 42.33 4.00
64 65 6.626302 TGCTATTGTAATTAAACAAGGCCAC 58.374 36.000 5.01 0.00 42.33 5.01
65 66 6.842437 TGCTATTGTAATTAAACAAGGCCA 57.158 33.333 5.01 4.19 42.33 5.36
66 67 7.167468 CGAATGCTATTGTAATTAAACAAGGCC 59.833 37.037 0.00 0.00 42.33 5.19
67 68 7.305993 GCGAATGCTATTGTAATTAAACAAGGC 60.306 37.037 11.61 11.61 39.31 4.35
68 69 7.097047 CGCGAATGCTATTGTAATTAAACAAGG 60.097 37.037 0.00 0.00 39.83 3.61
69 70 7.563296 GCGCGAATGCTATTGTAATTAAACAAG 60.563 37.037 12.10 0.00 39.83 3.16
70 71 6.195613 GCGCGAATGCTATTGTAATTAAACAA 59.804 34.615 12.10 0.00 40.36 2.83
71 72 5.679355 GCGCGAATGCTATTGTAATTAAACA 59.321 36.000 12.10 0.00 39.65 2.83
72 73 5.907391 AGCGCGAATGCTATTGTAATTAAAC 59.093 36.000 12.10 0.00 45.14 2.01
73 74 5.906838 CAGCGCGAATGCTATTGTAATTAAA 59.093 36.000 12.10 0.00 45.23 1.52
74 75 5.439828 CAGCGCGAATGCTATTGTAATTAA 58.560 37.500 12.10 0.00 45.23 1.40
75 76 4.610456 GCAGCGCGAATGCTATTGTAATTA 60.610 41.667 24.18 0.00 45.23 1.40
76 77 3.849645 GCAGCGCGAATGCTATTGTAATT 60.850 43.478 24.18 0.00 45.23 1.40
77 78 2.349817 GCAGCGCGAATGCTATTGTAAT 60.350 45.455 24.18 0.00 45.23 1.89
78 79 1.003972 GCAGCGCGAATGCTATTGTAA 60.004 47.619 24.18 0.00 45.23 2.41
79 80 0.581529 GCAGCGCGAATGCTATTGTA 59.418 50.000 24.18 0.00 45.23 2.41
80 81 1.353103 GCAGCGCGAATGCTATTGT 59.647 52.632 24.18 0.00 45.23 2.71
81 82 4.200740 GCAGCGCGAATGCTATTG 57.799 55.556 24.18 0.00 45.23 1.90
86 87 1.730547 ACAAAAGCAGCGCGAATGC 60.731 52.632 24.09 24.09 44.18 3.56
87 88 0.661187 ACACAAAAGCAGCGCGAATG 60.661 50.000 12.10 9.16 0.00 2.67
88 89 0.385974 GACACAAAAGCAGCGCGAAT 60.386 50.000 12.10 0.00 0.00 3.34
89 90 1.010125 GACACAAAAGCAGCGCGAA 60.010 52.632 12.10 0.00 0.00 4.70
90 91 2.631428 GACACAAAAGCAGCGCGA 59.369 55.556 12.10 0.00 0.00 5.87
91 92 2.792543 CGACACAAAAGCAGCGCG 60.793 61.111 0.00 0.00 0.00 6.86
138 139 1.933247 CATCTCGGCTCAAGAAGTCC 58.067 55.000 0.00 0.00 0.00 3.85
144 145 2.806856 GCACGCATCTCGGCTCAAG 61.807 63.158 0.00 0.00 43.86 3.02
148 149 2.893895 CATGCACGCATCTCGGCT 60.894 61.111 0.44 0.00 43.86 5.52
152 153 1.193203 CGGATAACATGCACGCATCTC 59.807 52.381 0.44 0.00 33.90 2.75
154 155 1.070577 GTCGGATAACATGCACGCATC 60.071 52.381 0.44 0.00 33.90 3.91
159 160 1.087202 TGCCGTCGGATAACATGCAC 61.087 55.000 17.49 0.00 0.00 4.57
167 168 3.536917 CCTGCCTGCCGTCGGATA 61.537 66.667 17.49 1.49 0.00 2.59
181 182 3.110178 GTTCCGGCGAACGTCCTG 61.110 66.667 9.30 0.00 39.14 3.86
192 1403 3.074412 ACTGATTTGTAGCAAGTTCCGG 58.926 45.455 0.00 0.00 0.00 5.14
193 1404 3.181530 CGACTGATTTGTAGCAAGTTCCG 60.182 47.826 0.00 0.00 0.00 4.30
200 1411 1.724623 GCGAACGACTGATTTGTAGCA 59.275 47.619 0.00 0.00 0.00 3.49
211 1422 3.800506 CGGAAAATATTAGGCGAACGACT 59.199 43.478 7.89 7.89 37.24 4.18
213 1424 4.044336 TCGGAAAATATTAGGCGAACGA 57.956 40.909 0.00 0.00 0.00 3.85
214 1425 4.782252 TTCGGAAAATATTAGGCGAACG 57.218 40.909 0.00 0.00 0.00 3.95
263 1474 9.271828 GGTGAAATGAAAACATTATGTTCCTTT 57.728 29.630 11.24 5.67 40.14 3.11
264 1475 8.650490 AGGTGAAATGAAAACATTATGTTCCTT 58.350 29.630 11.24 2.95 40.14 3.36
265 1476 8.193953 AGGTGAAATGAAAACATTATGTTCCT 57.806 30.769 11.24 7.13 40.14 3.36
266 1477 8.306761 AGAGGTGAAATGAAAACATTATGTTCC 58.693 33.333 11.24 7.18 40.14 3.62
267 1478 9.696917 AAGAGGTGAAATGAAAACATTATGTTC 57.303 29.630 11.24 0.57 40.14 3.18
272 1483 9.541143 GGAAAAAGAGGTGAAATGAAAACATTA 57.459 29.630 0.00 0.00 0.00 1.90
273 1484 8.046107 TGGAAAAAGAGGTGAAATGAAAACATT 58.954 29.630 0.00 0.00 0.00 2.71
274 1485 7.495606 GTGGAAAAAGAGGTGAAATGAAAACAT 59.504 33.333 0.00 0.00 0.00 2.71
275 1486 6.816140 GTGGAAAAAGAGGTGAAATGAAAACA 59.184 34.615 0.00 0.00 0.00 2.83
276 1487 6.257849 GGTGGAAAAAGAGGTGAAATGAAAAC 59.742 38.462 0.00 0.00 0.00 2.43
277 1488 6.070538 TGGTGGAAAAAGAGGTGAAATGAAAA 60.071 34.615 0.00 0.00 0.00 2.29
278 1489 5.423610 TGGTGGAAAAAGAGGTGAAATGAAA 59.576 36.000 0.00 0.00 0.00 2.69
279 1490 4.959210 TGGTGGAAAAAGAGGTGAAATGAA 59.041 37.500 0.00 0.00 0.00 2.57
280 1491 4.541705 TGGTGGAAAAAGAGGTGAAATGA 58.458 39.130 0.00 0.00 0.00 2.57
281 1492 4.935352 TGGTGGAAAAAGAGGTGAAATG 57.065 40.909 0.00 0.00 0.00 2.32
282 1493 4.528206 GGATGGTGGAAAAAGAGGTGAAAT 59.472 41.667 0.00 0.00 0.00 2.17
283 1494 3.895041 GGATGGTGGAAAAAGAGGTGAAA 59.105 43.478 0.00 0.00 0.00 2.69
284 1495 3.496331 GGATGGTGGAAAAAGAGGTGAA 58.504 45.455 0.00 0.00 0.00 3.18
285 1496 2.225017 GGGATGGTGGAAAAAGAGGTGA 60.225 50.000 0.00 0.00 0.00 4.02
286 1497 2.171003 GGGATGGTGGAAAAAGAGGTG 58.829 52.381 0.00 0.00 0.00 4.00
287 1498 2.073776 AGGGATGGTGGAAAAAGAGGT 58.926 47.619 0.00 0.00 0.00 3.85
288 1499 2.907458 AGGGATGGTGGAAAAAGAGG 57.093 50.000 0.00 0.00 0.00 3.69
289 1500 2.749621 CGAAGGGATGGTGGAAAAAGAG 59.250 50.000 0.00 0.00 0.00 2.85
290 1501 2.107552 ACGAAGGGATGGTGGAAAAAGA 59.892 45.455 0.00 0.00 0.00 2.52
291 1502 2.488153 GACGAAGGGATGGTGGAAAAAG 59.512 50.000 0.00 0.00 0.00 2.27
292 1503 2.107552 AGACGAAGGGATGGTGGAAAAA 59.892 45.455 0.00 0.00 0.00 1.94
293 1504 1.702957 AGACGAAGGGATGGTGGAAAA 59.297 47.619 0.00 0.00 0.00 2.29
294 1505 1.358152 AGACGAAGGGATGGTGGAAA 58.642 50.000 0.00 0.00 0.00 3.13
295 1506 2.241281 TAGACGAAGGGATGGTGGAA 57.759 50.000 0.00 0.00 0.00 3.53
296 1507 2.241281 TTAGACGAAGGGATGGTGGA 57.759 50.000 0.00 0.00 0.00 4.02
297 1508 4.891992 ATATTAGACGAAGGGATGGTGG 57.108 45.455 0.00 0.00 0.00 4.61
298 1509 7.170393 TCATATATTAGACGAAGGGATGGTG 57.830 40.000 0.00 0.00 0.00 4.17
299 1510 7.979786 ATCATATATTAGACGAAGGGATGGT 57.020 36.000 0.00 0.00 0.00 3.55
332 1543 9.959721 TGGTTCAGAAGCTAAGTAAATTAAGAT 57.040 29.630 13.45 0.00 0.00 2.40
333 1544 9.787435 TTGGTTCAGAAGCTAAGTAAATTAAGA 57.213 29.630 13.45 0.00 0.00 2.10
337 1548 9.914131 GAATTTGGTTCAGAAGCTAAGTAAATT 57.086 29.630 13.45 14.45 36.80 1.82
338 1549 9.301897 AGAATTTGGTTCAGAAGCTAAGTAAAT 57.698 29.630 13.45 7.62 39.39 1.40
339 1550 8.691661 AGAATTTGGTTCAGAAGCTAAGTAAA 57.308 30.769 13.45 5.72 39.39 2.01
340 1551 9.959721 ATAGAATTTGGTTCAGAAGCTAAGTAA 57.040 29.630 13.45 4.46 39.39 2.24
341 1552 9.959721 AATAGAATTTGGTTCAGAAGCTAAGTA 57.040 29.630 13.45 6.30 39.39 2.24
342 1553 8.870075 AATAGAATTTGGTTCAGAAGCTAAGT 57.130 30.769 13.45 11.03 39.39 2.24
344 1555 9.912634 CAAAATAGAATTTGGTTCAGAAGCTAA 57.087 29.630 13.45 12.13 39.39 3.09
345 1556 9.295825 TCAAAATAGAATTTGGTTCAGAAGCTA 57.704 29.630 13.45 3.12 40.04 3.32
346 1557 8.181904 TCAAAATAGAATTTGGTTCAGAAGCT 57.818 30.769 13.45 0.00 40.04 3.74
347 1558 8.992835 ATCAAAATAGAATTTGGTTCAGAAGC 57.007 30.769 5.33 5.33 40.04 3.86
368 1579 9.491675 TGATTAGAAGTTTGGTACGTAAATCAA 57.508 29.630 0.00 0.00 32.73 2.57
369 1580 9.491675 TTGATTAGAAGTTTGGTACGTAAATCA 57.508 29.630 0.00 2.46 33.26 2.57
442 1653 9.425893 CGTTAGCTTCTTGTCAATAATAATGTG 57.574 33.333 0.00 0.00 0.00 3.21
443 1654 9.162764 ACGTTAGCTTCTTGTCAATAATAATGT 57.837 29.630 0.00 0.00 0.00 2.71
446 1657 9.642327 TGTACGTTAGCTTCTTGTCAATAATAA 57.358 29.630 0.00 0.00 0.00 1.40
447 1658 9.811995 ATGTACGTTAGCTTCTTGTCAATAATA 57.188 29.630 0.00 0.00 0.00 0.98
448 1659 8.718102 ATGTACGTTAGCTTCTTGTCAATAAT 57.282 30.769 0.00 0.00 0.00 1.28
449 1660 9.297586 CTATGTACGTTAGCTTCTTGTCAATAA 57.702 33.333 0.00 0.00 0.00 1.40
450 1661 8.680001 TCTATGTACGTTAGCTTCTTGTCAATA 58.320 33.333 0.00 0.00 0.00 1.90
451 1662 7.544622 TCTATGTACGTTAGCTTCTTGTCAAT 58.455 34.615 0.00 0.00 0.00 2.57
452 1663 6.916440 TCTATGTACGTTAGCTTCTTGTCAA 58.084 36.000 0.00 0.00 0.00 3.18
453 1664 6.505044 TCTATGTACGTTAGCTTCTTGTCA 57.495 37.500 0.00 0.00 0.00 3.58
454 1665 7.988904 ATTCTATGTACGTTAGCTTCTTGTC 57.011 36.000 0.00 0.00 0.00 3.18
490 1701 1.586028 AATGCCCATGCGTTGTGAC 59.414 52.632 0.00 0.00 44.90 3.67
491 1702 4.093966 AATGCCCATGCGTTGTGA 57.906 50.000 0.00 0.00 44.90 3.58
496 1707 1.340017 ACTAGAACAATGCCCATGCGT 60.340 47.619 0.00 0.00 41.78 5.24
497 1708 1.382522 ACTAGAACAATGCCCATGCG 58.617 50.000 0.00 0.00 41.78 4.73
498 1709 6.176183 AGATATACTAGAACAATGCCCATGC 58.824 40.000 0.00 0.00 38.26 4.06
499 1710 9.725019 TTTAGATATACTAGAACAATGCCCATG 57.275 33.333 0.00 0.00 32.30 3.66
501 1712 9.778741 CTTTTAGATATACTAGAACAATGCCCA 57.221 33.333 0.00 0.00 32.30 5.36
502 1713 9.780186 ACTTTTAGATATACTAGAACAATGCCC 57.220 33.333 0.00 0.00 32.30 5.36
507 1718 9.609346 GCCCAACTTTTAGATATACTAGAACAA 57.391 33.333 0.00 0.00 32.30 2.83
508 1719 8.764558 TGCCCAACTTTTAGATATACTAGAACA 58.235 33.333 0.00 0.00 32.30 3.18
509 1720 9.262358 CTGCCCAACTTTTAGATATACTAGAAC 57.738 37.037 0.00 0.00 32.30 3.01
510 1721 8.989131 ACTGCCCAACTTTTAGATATACTAGAA 58.011 33.333 0.00 0.00 32.30 2.10
511 1722 8.548880 ACTGCCCAACTTTTAGATATACTAGA 57.451 34.615 0.00 0.00 32.30 2.43
512 1723 9.614792 AAACTGCCCAACTTTTAGATATACTAG 57.385 33.333 0.00 0.00 32.30 2.57
513 1724 9.969001 AAAACTGCCCAACTTTTAGATATACTA 57.031 29.630 0.00 0.00 0.00 1.82
514 1725 8.879427 AAAACTGCCCAACTTTTAGATATACT 57.121 30.769 0.00 0.00 0.00 2.12
560 1772 6.920758 GTCTCAGTACGAATCATTCTAAGCAT 59.079 38.462 0.00 0.00 0.00 3.79
565 1777 8.904099 TGATAGTCTCAGTACGAATCATTCTA 57.096 34.615 0.00 0.00 0.00 2.10
573 1785 4.201792 GCGAGTTGATAGTCTCAGTACGAA 60.202 45.833 0.00 0.00 34.68 3.85
736 1951 6.545666 TCCATATTTGCGATATTTCTTGGTGT 59.454 34.615 0.00 0.00 0.00 4.16
755 1970 2.705658 TCTTCCAGCGACCATTCCATAT 59.294 45.455 0.00 0.00 0.00 1.78
770 1985 3.636820 ACCACACGGTGTCTTCCA 58.363 55.556 11.54 0.00 46.79 3.53
860 2108 1.831652 CGGTCTTTCTGCTCCTGGGT 61.832 60.000 0.00 0.00 0.00 4.51
864 2112 1.768684 TTGCCGGTCTTTCTGCTCCT 61.769 55.000 1.90 0.00 0.00 3.69
914 2162 1.673033 CCCTCTGGTAAACTGTCTGCG 60.673 57.143 0.00 0.00 0.00 5.18
922 2170 2.152016 GCACTGTTCCCTCTGGTAAAC 58.848 52.381 0.00 0.00 0.00 2.01
948 2223 2.280797 AAGAGCGAGCGGTGCAAA 60.281 55.556 0.00 0.00 33.85 3.68
1043 2318 1.057847 CGAGCAACACGACGAAGATTC 59.942 52.381 0.00 0.00 0.00 2.52
1445 2720 7.413438 CGAATTACAAGAGCAAGATAAGCAAGT 60.413 37.037 0.00 0.00 0.00 3.16
1501 2776 9.453830 AGACTTATATTTAGAAATGGAGGGAGT 57.546 33.333 0.00 0.00 0.00 3.85
1522 2797 9.575783 GTCGATAGTGAAATCTCTAAAAGACTT 57.424 33.333 0.00 0.00 35.07 3.01
1523 2798 8.962679 AGTCGATAGTGAAATCTCTAAAAGACT 58.037 33.333 14.73 14.73 35.07 3.24
1528 2803 8.838365 GGAGTAGTCGATAGTGAAATCTCTAAA 58.162 37.037 0.00 0.00 37.40 1.85
1529 2804 7.444792 GGGAGTAGTCGATAGTGAAATCTCTAA 59.555 40.741 0.00 0.00 37.40 2.10
1530 2805 6.935771 GGGAGTAGTCGATAGTGAAATCTCTA 59.064 42.308 0.00 0.00 37.40 2.43
1531 2806 5.766174 GGGAGTAGTCGATAGTGAAATCTCT 59.234 44.000 0.00 0.00 37.40 3.10
1532 2807 5.766174 AGGGAGTAGTCGATAGTGAAATCTC 59.234 44.000 0.00 0.00 37.40 2.75
1533 2808 5.697067 AGGGAGTAGTCGATAGTGAAATCT 58.303 41.667 0.00 0.00 37.40 2.40
1534 2809 5.048573 GGAGGGAGTAGTCGATAGTGAAATC 60.049 48.000 0.00 0.00 37.40 2.17
1535 2810 4.828387 GGAGGGAGTAGTCGATAGTGAAAT 59.172 45.833 0.00 0.00 37.40 2.17
1536 2811 4.205587 GGAGGGAGTAGTCGATAGTGAAA 58.794 47.826 0.00 0.00 37.40 2.69
1537 2812 3.743584 CGGAGGGAGTAGTCGATAGTGAA 60.744 52.174 0.00 0.00 37.40 3.18
1538 2813 2.224233 CGGAGGGAGTAGTCGATAGTGA 60.224 54.545 0.00 0.00 37.40 3.41
1539 2814 2.144730 CGGAGGGAGTAGTCGATAGTG 58.855 57.143 0.00 0.00 37.40 2.74
1540 2815 1.767681 ACGGAGGGAGTAGTCGATAGT 59.232 52.381 0.00 0.00 37.40 2.12
1541 2816 2.547299 ACGGAGGGAGTAGTCGATAG 57.453 55.000 0.00 0.00 0.00 2.08
1542 2817 2.486191 GGAACGGAGGGAGTAGTCGATA 60.486 54.545 0.00 0.00 0.00 2.92
1543 2818 1.677942 GAACGGAGGGAGTAGTCGAT 58.322 55.000 0.00 0.00 0.00 3.59
1544 2819 0.393537 GGAACGGAGGGAGTAGTCGA 60.394 60.000 0.00 0.00 0.00 4.20
1545 2820 0.394080 AGGAACGGAGGGAGTAGTCG 60.394 60.000 0.00 0.00 0.00 4.18
1546 2821 1.849977 AAGGAACGGAGGGAGTAGTC 58.150 55.000 0.00 0.00 0.00 2.59
1547 2822 2.322339 AAAGGAACGGAGGGAGTAGT 57.678 50.000 0.00 0.00 0.00 2.73
1548 2823 3.697619 AAAAAGGAACGGAGGGAGTAG 57.302 47.619 0.00 0.00 0.00 2.57
1572 2847 9.944663 TGCTTTGTATGTAGTAAACTTCAAAAG 57.055 29.630 7.49 7.49 0.00 2.27
1587 2862 8.584157 TGGATTCACTTATTTTGCTTTGTATGT 58.416 29.630 0.00 0.00 0.00 2.29
1588 2863 8.863049 GTGGATTCACTTATTTTGCTTTGTATG 58.137 33.333 0.00 0.00 40.58 2.39
1589 2864 8.584157 TGTGGATTCACTTATTTTGCTTTGTAT 58.416 29.630 5.55 0.00 43.94 2.29
1590 2865 7.865385 GTGTGGATTCACTTATTTTGCTTTGTA 59.135 33.333 5.55 0.00 43.94 2.41
1591 2866 6.701400 GTGTGGATTCACTTATTTTGCTTTGT 59.299 34.615 5.55 0.00 43.94 2.83
1592 2867 6.925165 AGTGTGGATTCACTTATTTTGCTTTG 59.075 34.615 5.55 0.00 44.92 2.77
1593 2868 7.014615 AGAGTGTGGATTCACTTATTTTGCTTT 59.985 33.333 5.55 0.00 46.81 3.51
1594 2869 6.491403 AGAGTGTGGATTCACTTATTTTGCTT 59.509 34.615 5.55 0.00 46.81 3.91
1595 2870 6.006449 AGAGTGTGGATTCACTTATTTTGCT 58.994 36.000 5.55 0.00 46.81 3.91
1596 2871 6.259550 AGAGTGTGGATTCACTTATTTTGC 57.740 37.500 5.55 0.00 46.81 3.68
1603 2878 9.167311 GACATATTTTAGAGTGTGGATTCACTT 57.833 33.333 5.55 0.00 46.81 3.16
1605 2880 8.723942 AGACATATTTTAGAGTGTGGATTCAC 57.276 34.615 0.00 0.00 43.87 3.18
1633 2908 9.197306 TCCACTACAAACTACATACAGATGTAT 57.803 33.333 0.00 0.00 45.42 2.29
1634 2909 8.584063 TCCACTACAAACTACATACAGATGTA 57.416 34.615 0.00 0.00 44.77 2.29
1636 2911 8.948631 ATTCCACTACAAACTACATACAGATG 57.051 34.615 0.00 0.00 39.16 2.90
1637 2912 8.982723 AGATTCCACTACAAACTACATACAGAT 58.017 33.333 0.00 0.00 0.00 2.90
1638 2913 8.362464 AGATTCCACTACAAACTACATACAGA 57.638 34.615 0.00 0.00 0.00 3.41
1639 2914 8.470805 AGAGATTCCACTACAAACTACATACAG 58.529 37.037 0.00 0.00 0.00 2.74
1640 2915 8.362464 AGAGATTCCACTACAAACTACATACA 57.638 34.615 0.00 0.00 0.00 2.29
1647 2922 9.274206 GTCTTTTTAGAGATTCCACTACAAACT 57.726 33.333 0.00 0.00 0.00 2.66
1648 2923 9.274206 AGTCTTTTTAGAGATTCCACTACAAAC 57.726 33.333 0.00 0.00 0.00 2.93
1649 2924 9.847224 AAGTCTTTTTAGAGATTCCACTACAAA 57.153 29.630 0.00 0.00 0.00 2.83
1651 2926 9.924650 GTAAGTCTTTTTAGAGATTCCACTACA 57.075 33.333 0.00 0.00 0.00 2.74
1652 2927 9.924650 TGTAAGTCTTTTTAGAGATTCCACTAC 57.075 33.333 0.00 0.00 0.00 2.73
1657 2932 9.974750 CGAAATGTAAGTCTTTTTAGAGATTCC 57.025 33.333 0.00 0.00 0.00 3.01
1658 2933 9.974750 CCGAAATGTAAGTCTTTTTAGAGATTC 57.025 33.333 0.00 0.00 0.00 2.52
1659 2934 9.720769 TCCGAAATGTAAGTCTTTTTAGAGATT 57.279 29.630 0.00 0.00 0.00 2.40
1660 2935 9.720769 TTCCGAAATGTAAGTCTTTTTAGAGAT 57.279 29.630 0.00 0.00 0.00 2.75
1661 2936 8.985805 GTTCCGAAATGTAAGTCTTTTTAGAGA 58.014 33.333 0.00 0.00 0.00 3.10
1662 2937 7.950496 CGTTCCGAAATGTAAGTCTTTTTAGAG 59.050 37.037 0.00 0.00 0.00 2.43
1663 2938 7.095523 CCGTTCCGAAATGTAAGTCTTTTTAGA 60.096 37.037 0.00 0.00 0.00 2.10
1664 2939 7.013529 CCGTTCCGAAATGTAAGTCTTTTTAG 58.986 38.462 0.00 0.00 0.00 1.85
1665 2940 6.705381 TCCGTTCCGAAATGTAAGTCTTTTTA 59.295 34.615 0.00 0.00 0.00 1.52
1666 2941 5.528320 TCCGTTCCGAAATGTAAGTCTTTTT 59.472 36.000 0.00 0.00 0.00 1.94
1667 2942 5.058490 TCCGTTCCGAAATGTAAGTCTTTT 58.942 37.500 0.00 0.00 0.00 2.27
1668 2943 4.634199 TCCGTTCCGAAATGTAAGTCTTT 58.366 39.130 0.00 0.00 0.00 2.52
1669 2944 4.243270 CTCCGTTCCGAAATGTAAGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
1670 2945 3.368116 CCTCCGTTCCGAAATGTAAGTCT 60.368 47.826 0.00 0.00 0.00 3.24
1671 2946 2.928116 CCTCCGTTCCGAAATGTAAGTC 59.072 50.000 0.00 0.00 0.00 3.01
1672 2947 2.354403 CCCTCCGTTCCGAAATGTAAGT 60.354 50.000 0.00 0.00 0.00 2.24
1673 2948 2.093869 TCCCTCCGTTCCGAAATGTAAG 60.094 50.000 0.00 0.00 0.00 2.34
1674 2949 1.901159 TCCCTCCGTTCCGAAATGTAA 59.099 47.619 0.00 0.00 0.00 2.41
1675 2950 1.479323 CTCCCTCCGTTCCGAAATGTA 59.521 52.381 0.00 0.00 0.00 2.29
1676 2951 0.249398 CTCCCTCCGTTCCGAAATGT 59.751 55.000 0.00 0.00 0.00 2.71
1677 2952 0.249398 ACTCCCTCCGTTCCGAAATG 59.751 55.000 0.00 0.00 0.00 2.32
1678 2953 1.479730 GTACTCCCTCCGTTCCGAAAT 59.520 52.381 0.00 0.00 0.00 2.17
1679 2954 0.890683 GTACTCCCTCCGTTCCGAAA 59.109 55.000 0.00 0.00 0.00 3.46
1680 2955 0.038744 AGTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
1681 2956 0.911769 TAGTACTCCCTCCGTTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
1682 2957 1.307097 CTAGTACTCCCTCCGTTCCG 58.693 60.000 0.00 0.00 0.00 4.30
1683 2958 1.031235 GCTAGTACTCCCTCCGTTCC 58.969 60.000 0.00 0.00 0.00 3.62
1684 2959 1.760192 TGCTAGTACTCCCTCCGTTC 58.240 55.000 0.00 0.00 0.00 3.95
1685 2960 2.100989 CTTGCTAGTACTCCCTCCGTT 58.899 52.381 0.00 0.00 0.00 4.44
1686 2961 1.284198 TCTTGCTAGTACTCCCTCCGT 59.716 52.381 0.00 0.00 0.00 4.69
1687 2962 1.677052 GTCTTGCTAGTACTCCCTCCG 59.323 57.143 0.00 0.00 0.00 4.63
1688 2963 2.736347 TGTCTTGCTAGTACTCCCTCC 58.264 52.381 0.00 0.00 0.00 4.30
1689 2964 5.565834 GCATATGTCTTGCTAGTACTCCCTC 60.566 48.000 0.00 0.00 37.14 4.30
1690 2965 4.282195 GCATATGTCTTGCTAGTACTCCCT 59.718 45.833 0.00 0.00 37.14 4.20
1691 2966 4.039245 TGCATATGTCTTGCTAGTACTCCC 59.961 45.833 0.00 0.00 40.77 4.30
1692 2967 4.985409 GTGCATATGTCTTGCTAGTACTCC 59.015 45.833 0.00 0.00 40.77 3.85
1693 2968 4.985409 GGTGCATATGTCTTGCTAGTACTC 59.015 45.833 0.00 0.00 40.77 2.59
1694 2969 4.405680 TGGTGCATATGTCTTGCTAGTACT 59.594 41.667 4.29 0.00 40.77 2.73
1695 2970 4.508124 GTGGTGCATATGTCTTGCTAGTAC 59.492 45.833 4.29 0.00 40.77 2.73
1696 2971 4.161377 TGTGGTGCATATGTCTTGCTAGTA 59.839 41.667 4.29 0.00 40.77 1.82
1703 2978 7.338710 ACTTATTAGTGTGGTGCATATGTCTT 58.661 34.615 4.29 0.00 31.99 3.01
1706 2981 5.753438 CGACTTATTAGTGTGGTGCATATGT 59.247 40.000 4.29 0.00 33.84 2.29
1827 3107 7.867160 ATATCGGGGTCCTTTCTATAAGAAA 57.133 36.000 2.39 2.39 41.51 2.52
1834 3114 5.190132 TGTTTGAATATCGGGGTCCTTTCTA 59.810 40.000 0.00 0.00 0.00 2.10
1837 3117 4.014406 GTGTTTGAATATCGGGGTCCTTT 58.986 43.478 0.00 0.00 0.00 3.11
1840 3120 3.277142 AGTGTTTGAATATCGGGGTCC 57.723 47.619 0.00 0.00 0.00 4.46
1841 3121 4.100498 TCCTAGTGTTTGAATATCGGGGTC 59.900 45.833 0.00 0.00 0.00 4.46
1842 3122 4.035112 TCCTAGTGTTTGAATATCGGGGT 58.965 43.478 0.00 0.00 0.00 4.95
1843 3123 4.682778 TCCTAGTGTTTGAATATCGGGG 57.317 45.455 0.00 0.00 0.00 5.73
1844 3124 7.499232 AGAAATTCCTAGTGTTTGAATATCGGG 59.501 37.037 0.00 0.00 0.00 5.14
1845 3125 8.438676 AGAAATTCCTAGTGTTTGAATATCGG 57.561 34.615 0.00 0.00 0.00 4.18
1850 3130 8.084684 GCAGAAAGAAATTCCTAGTGTTTGAAT 58.915 33.333 0.00 0.00 38.94 2.57
1851 3131 7.285401 AGCAGAAAGAAATTCCTAGTGTTTGAA 59.715 33.333 0.00 0.00 38.94 2.69
1852 3132 6.772716 AGCAGAAAGAAATTCCTAGTGTTTGA 59.227 34.615 0.00 0.00 38.94 2.69
1853 3133 6.974965 AGCAGAAAGAAATTCCTAGTGTTTG 58.025 36.000 0.00 0.00 38.94 2.93
1854 3134 7.719633 TGTAGCAGAAAGAAATTCCTAGTGTTT 59.280 33.333 0.00 0.00 38.94 2.83
1855 3135 7.224297 TGTAGCAGAAAGAAATTCCTAGTGTT 58.776 34.615 0.00 0.00 38.94 3.32
1856 3136 6.769512 TGTAGCAGAAAGAAATTCCTAGTGT 58.230 36.000 0.00 0.00 38.94 3.55
1857 3137 7.335422 ACATGTAGCAGAAAGAAATTCCTAGTG 59.665 37.037 0.00 0.00 38.94 2.74
1858 3138 7.398024 ACATGTAGCAGAAAGAAATTCCTAGT 58.602 34.615 0.00 0.00 38.94 2.57
1859 3139 7.856145 ACATGTAGCAGAAAGAAATTCCTAG 57.144 36.000 0.00 0.00 38.94 3.02
1910 3190 6.923928 TGGAATCCTTTTCTTTTGCAAAAG 57.076 33.333 35.73 35.73 45.17 2.27
1917 3197 9.325248 TCCTGATTATTGGAATCCTTTTCTTTT 57.675 29.630 0.00 0.00 0.00 2.27
1941 3221 6.319658 TGCCAAGAGATTGTAATGATCTTTCC 59.680 38.462 0.00 0.00 34.13 3.13
1943 3223 7.114754 TCTGCCAAGAGATTGTAATGATCTTT 58.885 34.615 0.00 0.00 34.13 2.52
1960 3241 1.446907 AATTCGCACTCTCTGCCAAG 58.553 50.000 0.00 0.00 43.84 3.61
1970 3251 2.290260 TGGACCTGATGAAATTCGCACT 60.290 45.455 0.00 0.00 0.00 4.40
1971 3252 2.083774 TGGACCTGATGAAATTCGCAC 58.916 47.619 0.00 0.00 0.00 5.34
1974 3255 6.851609 TGTAAAATGGACCTGATGAAATTCG 58.148 36.000 0.00 0.00 0.00 3.34
1975 3256 6.753744 GCTGTAAAATGGACCTGATGAAATTC 59.246 38.462 0.00 0.00 0.00 2.17
1981 3262 3.355378 TGGCTGTAAAATGGACCTGATG 58.645 45.455 0.00 0.00 0.00 3.07
1985 3266 4.687219 GCTCTATGGCTGTAAAATGGACCT 60.687 45.833 0.00 0.00 0.00 3.85
1990 3271 4.497006 GCACTGCTCTATGGCTGTAAAATG 60.497 45.833 0.00 0.00 41.23 2.32
1995 3276 1.137675 CAGCACTGCTCTATGGCTGTA 59.862 52.381 0.00 0.00 45.11 2.74
1996 3277 0.107800 CAGCACTGCTCTATGGCTGT 60.108 55.000 0.00 0.00 45.11 4.40
2005 3286 0.891373 TCTGTACCTCAGCACTGCTC 59.109 55.000 0.00 0.00 43.32 4.26
2009 3290 1.889829 GTCACTCTGTACCTCAGCACT 59.110 52.381 0.00 0.00 43.32 4.40
2014 3295 2.248248 CTTGGGTCACTCTGTACCTCA 58.752 52.381 0.00 0.00 35.97 3.86
2019 3300 1.070134 GCACACTTGGGTCACTCTGTA 59.930 52.381 0.00 0.00 0.00 2.74
2027 3308 0.465460 TCCACTTGCACACTTGGGTC 60.465 55.000 0.00 0.00 0.00 4.46
2028 3309 0.185901 ATCCACTTGCACACTTGGGT 59.814 50.000 0.00 0.00 0.00 4.51
2029 3310 0.599558 CATCCACTTGCACACTTGGG 59.400 55.000 0.00 0.00 0.00 4.12
2030 3311 0.599558 CCATCCACTTGCACACTTGG 59.400 55.000 0.00 0.00 0.00 3.61
2031 3312 0.038892 GCCATCCACTTGCACACTTG 60.039 55.000 0.00 0.00 0.00 3.16
2032 3313 0.178981 AGCCATCCACTTGCACACTT 60.179 50.000 0.00 0.00 0.00 3.16
2033 3314 0.892358 CAGCCATCCACTTGCACACT 60.892 55.000 0.00 0.00 0.00 3.55
2034 3315 1.174712 ACAGCCATCCACTTGCACAC 61.175 55.000 0.00 0.00 0.00 3.82
2035 3316 0.399833 TACAGCCATCCACTTGCACA 59.600 50.000 0.00 0.00 0.00 4.57
2036 3317 1.755179 ATACAGCCATCCACTTGCAC 58.245 50.000 0.00 0.00 0.00 4.57
2037 3318 3.643199 TTATACAGCCATCCACTTGCA 57.357 42.857 0.00 0.00 0.00 4.08
2038 3319 3.947834 ACTTTATACAGCCATCCACTTGC 59.052 43.478 0.00 0.00 0.00 4.01
2039 3320 6.515272 AAACTTTATACAGCCATCCACTTG 57.485 37.500 0.00 0.00 0.00 3.16
2040 3321 8.052748 TCATAAACTTTATACAGCCATCCACTT 58.947 33.333 0.00 0.00 0.00 3.16
2041 3322 7.573710 TCATAAACTTTATACAGCCATCCACT 58.426 34.615 0.00 0.00 0.00 4.00
2042 3323 7.041098 CCTCATAAACTTTATACAGCCATCCAC 60.041 40.741 0.00 0.00 0.00 4.02
2043 3324 6.998074 CCTCATAAACTTTATACAGCCATCCA 59.002 38.462 0.00 0.00 0.00 3.41
2044 3325 6.431234 CCCTCATAAACTTTATACAGCCATCC 59.569 42.308 0.00 0.00 0.00 3.51
2045 3326 6.072452 GCCCTCATAAACTTTATACAGCCATC 60.072 42.308 0.00 0.00 0.00 3.51
2046 3327 5.770162 GCCCTCATAAACTTTATACAGCCAT 59.230 40.000 0.00 0.00 0.00 4.40
2047 3328 5.130350 GCCCTCATAAACTTTATACAGCCA 58.870 41.667 0.00 0.00 0.00 4.75
2048 3329 4.213482 CGCCCTCATAAACTTTATACAGCC 59.787 45.833 0.00 0.00 0.00 4.85
2049 3330 4.814771 ACGCCCTCATAAACTTTATACAGC 59.185 41.667 0.00 0.00 0.00 4.40
2050 3331 5.236478 CCACGCCCTCATAAACTTTATACAG 59.764 44.000 0.00 0.00 0.00 2.74
2051 3332 5.104859 TCCACGCCCTCATAAACTTTATACA 60.105 40.000 0.00 0.00 0.00 2.29
2052 3333 5.362263 TCCACGCCCTCATAAACTTTATAC 58.638 41.667 0.00 0.00 0.00 1.47
2053 3334 5.617528 TCCACGCCCTCATAAACTTTATA 57.382 39.130 0.00 0.00 0.00 0.98
2054 3335 4.497291 TCCACGCCCTCATAAACTTTAT 57.503 40.909 0.00 0.00 0.00 1.40
2055 3336 3.985019 TCCACGCCCTCATAAACTTTA 57.015 42.857 0.00 0.00 0.00 1.85
2056 3337 2.871096 TCCACGCCCTCATAAACTTT 57.129 45.000 0.00 0.00 0.00 2.66
2057 3338 2.026262 ACATCCACGCCCTCATAAACTT 60.026 45.455 0.00 0.00 0.00 2.66
2058 3339 1.559682 ACATCCACGCCCTCATAAACT 59.440 47.619 0.00 0.00 0.00 2.66
2059 3340 2.038387 ACATCCACGCCCTCATAAAC 57.962 50.000 0.00 0.00 0.00 2.01
2060 3341 2.290641 ACAACATCCACGCCCTCATAAA 60.291 45.455 0.00 0.00 0.00 1.40
2061 3342 1.280710 ACAACATCCACGCCCTCATAA 59.719 47.619 0.00 0.00 0.00 1.90
2062 3343 0.908910 ACAACATCCACGCCCTCATA 59.091 50.000 0.00 0.00 0.00 2.15
2063 3344 0.038166 AACAACATCCACGCCCTCAT 59.962 50.000 0.00 0.00 0.00 2.90
2064 3345 0.605319 GAACAACATCCACGCCCTCA 60.605 55.000 0.00 0.00 0.00 3.86
2065 3346 0.321653 AGAACAACATCCACGCCCTC 60.322 55.000 0.00 0.00 0.00 4.30
2066 3347 0.321653 GAGAACAACATCCACGCCCT 60.322 55.000 0.00 0.00 0.00 5.19
2067 3348 0.321653 AGAGAACAACATCCACGCCC 60.322 55.000 0.00 0.00 0.00 6.13
2068 3349 1.197721 CAAGAGAACAACATCCACGCC 59.802 52.381 0.00 0.00 0.00 5.68
2069 3350 1.400242 GCAAGAGAACAACATCCACGC 60.400 52.381 0.00 0.00 0.00 5.34
2070 3351 1.197721 GGCAAGAGAACAACATCCACG 59.802 52.381 0.00 0.00 0.00 4.94
2071 3352 1.541588 GGGCAAGAGAACAACATCCAC 59.458 52.381 0.00 0.00 0.00 4.02
2072 3353 1.144708 TGGGCAAGAGAACAACATCCA 59.855 47.619 0.00 0.00 0.00 3.41
2073 3354 1.909700 TGGGCAAGAGAACAACATCC 58.090 50.000 0.00 0.00 0.00 3.51
2074 3355 4.320608 TTTTGGGCAAGAGAACAACATC 57.679 40.909 0.00 0.00 0.00 3.06
2075 3356 4.751767 TTTTTGGGCAAGAGAACAACAT 57.248 36.364 0.00 0.00 0.00 2.71
2076 3357 4.751767 ATTTTTGGGCAAGAGAACAACA 57.248 36.364 0.00 0.00 0.00 3.33
2077 3358 5.408204 CAATTTTTGGGCAAGAGAACAAC 57.592 39.130 0.00 0.00 0.00 3.32
2131 3412 1.885887 TGCTTTGAAGGATTTGTCCGG 59.114 47.619 0.00 0.00 34.28 5.14
2135 3416 2.353011 CGGCATGCTTTGAAGGATTTGT 60.353 45.455 18.92 0.00 34.64 2.83
2171 3453 3.971971 GGCCTAGGTACTTCATAGGGAAA 59.028 47.826 11.31 0.00 46.88 3.13
2276 3558 5.163622 CCAATAGTAGTGATGTTTTGGCCTG 60.164 44.000 3.32 0.00 0.00 4.85
2312 4054 3.627395 ATCCACGCATTGTCCTTAAGA 57.373 42.857 3.36 0.00 0.00 2.10
2315 4057 4.075682 TGAAAATCCACGCATTGTCCTTA 58.924 39.130 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.