Multiple sequence alignment - TraesCS3B01G407800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G407800 chr3B 100.000 3743 0 0 1 3743 643261945 643258203 0.000000e+00 6913
1 TraesCS3B01G407800 chr3A 93.011 1488 49 14 1583 3028 624833125 624831651 0.000000e+00 2121
2 TraesCS3B01G407800 chr3A 90.895 659 48 6 901 1555 624833863 624833213 0.000000e+00 874
3 TraesCS3B01G407800 chr3A 86.978 407 35 10 3070 3466 624831650 624831252 3.430000e-120 442
4 TraesCS3B01G407800 chr3A 88.421 95 2 3 3649 3743 624830943 624830858 5.110000e-19 106
5 TraesCS3B01G407800 chr3D 97.175 708 18 1 2269 2976 481704706 481704001 0.000000e+00 1195
6 TraesCS3B01G407800 chr3D 94.102 729 28 4 1573 2291 481705455 481704732 0.000000e+00 1094
7 TraesCS3B01G407800 chr3D 87.338 924 62 17 711 1583 481706416 481705497 0.000000e+00 1007
8 TraesCS3B01G407800 chr3D 83.955 268 42 1 1 268 427459990 427459724 4.800000e-64 255
9 TraesCS3B01G407800 chr3D 92.414 145 7 2 3245 3389 481703942 481703802 1.760000e-48 204
10 TraesCS3B01G407800 chr2A 82.660 421 63 10 276 692 329695133 329694719 7.640000e-97 364
11 TraesCS3B01G407800 chr2A 81.614 446 75 6 256 698 734107658 734107217 2.750000e-96 363
12 TraesCS3B01G407800 chr2A 86.641 262 34 1 1 262 517407033 517407293 4.730000e-74 289
13 TraesCS3B01G407800 chr2A 84.615 260 39 1 1 260 113602008 113602266 1.330000e-64 257
14 TraesCS3B01G407800 chr2D 81.986 433 68 8 260 690 286668388 286668812 3.550000e-95 359
15 TraesCS3B01G407800 chr2D 80.137 438 77 9 276 707 498515766 498515333 6.030000e-83 318
16 TraesCS3B01G407800 chr2D 87.444 223 21 3 3029 3245 558801400 558801621 2.230000e-62 250
17 TraesCS3B01G407800 chr2D 84.170 259 40 1 2 260 637975575 637975318 2.230000e-62 250
18 TraesCS3B01G407800 chr1D 81.818 418 69 6 276 691 412033764 412034176 9.950000e-91 344
19 TraesCS3B01G407800 chr1D 86.235 247 33 1 1 247 465879780 465879535 2.220000e-67 267
20 TraesCS3B01G407800 chr5D 81.050 438 74 8 276 707 564224620 564224186 1.290000e-89 340
21 TraesCS3B01G407800 chr5D 86.260 262 35 1 1 262 391893904 391894164 2.200000e-72 283
22 TraesCS3B01G407800 chr1B 81.106 434 69 10 260 686 543462364 543462791 5.990000e-88 335
23 TraesCS3B01G407800 chr6D 81.407 398 70 4 276 671 397079734 397079339 4.660000e-84 322
24 TraesCS3B01G407800 chr6A 80.000 435 76 9 276 704 562266371 562265942 1.010000e-80 311
25 TraesCS3B01G407800 chr6A 84.644 267 23 8 2999 3248 13387274 13387539 2.230000e-62 250
26 TraesCS3B01G407800 chr1A 84.231 260 39 2 3 262 12419925 12419668 6.210000e-63 252
27 TraesCS3B01G407800 chrUn 87.387 222 23 3 3027 3244 202180667 202180447 2.230000e-62 250
28 TraesCS3B01G407800 chrUn 87.963 216 21 3 3027 3238 210630976 210631190 2.230000e-62 250
29 TraesCS3B01G407800 chrUn 87.963 216 21 3 3027 3238 258432547 258432761 2.230000e-62 250
30 TraesCS3B01G407800 chrUn 86.996 223 23 3 3027 3244 443158058 443157837 2.890000e-61 246
31 TraesCS3B01G407800 chr7A 87.273 220 22 3 3029 3243 515222529 515222311 2.890000e-61 246
32 TraesCS3B01G407800 chr4D 83.271 269 43 2 1 268 16118461 16118194 2.890000e-61 246
33 TraesCS3B01G407800 chr4A 84.733 262 22 8 2999 3243 212812013 212811753 2.890000e-61 246
34 TraesCS3B01G407800 chr5A 83.650 263 40 3 1 262 156248808 156249068 1.040000e-60 244


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G407800 chr3B 643258203 643261945 3742 True 6913.00 6913 100.00000 1 3743 1 chr3B.!!$R1 3742
1 TraesCS3B01G407800 chr3A 624830858 624833863 3005 True 885.75 2121 89.82625 901 3743 4 chr3A.!!$R1 2842
2 TraesCS3B01G407800 chr3D 481703802 481706416 2614 True 875.00 1195 92.75725 711 3389 4 chr3D.!!$R2 2678

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
583 584 0.035439 GGGGAGCGAAACTGGATGAA 60.035 55.0 0.0 0.0 0.00 2.57 F
597 598 0.101399 GATGAAGCTCCGCTCGAAGA 59.899 55.0 0.0 0.0 38.25 2.87 F
759 760 0.237235 CATTCGGTGGTTTGGACGTG 59.763 55.0 0.0 0.0 0.00 4.49 F
1127 1173 0.252835 GACCCCTACCCAGGTAACCA 60.253 60.0 0.0 0.0 40.79 3.67 F
2338 2549 0.326264 CCAGCCTAACCAAGCAGACT 59.674 55.0 0.0 0.0 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1401 1455 0.390472 CTCCGCTTCCAACACTCTCC 60.390 60.000 0.00 0.0 0.00 3.71 R
1402 1456 0.603569 TCTCCGCTTCCAACACTCTC 59.396 55.000 0.00 0.0 0.00 3.20 R
1888 2013 0.669318 CGCAAGGAGTCCGTAAGCAA 60.669 55.000 2.76 0.0 0.00 3.91 R
2403 2614 1.906253 CTCTGTGGCTGAGATGGCT 59.094 57.895 0.00 0.0 32.36 4.75 R
3694 4103 0.105964 CAGACCACGGTGGAACTTCA 59.894 55.000 32.72 0.0 40.96 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.237445 GAGGAGATGGTCGTCCGA 57.763 61.111 0.00 0.00 37.97 4.55
19 20 1.728672 GAGGAGATGGTCGTCCGAC 59.271 63.158 11.22 11.22 43.87 4.79
20 21 0.748729 GAGGAGATGGTCGTCCGACT 60.749 60.000 18.17 0.67 44.04 4.18
21 22 0.323542 AGGAGATGGTCGTCCGACTT 60.324 55.000 18.17 7.51 44.04 3.01
22 23 0.179134 GGAGATGGTCGTCCGACTTG 60.179 60.000 18.17 0.00 44.04 3.16
23 24 0.526662 GAGATGGTCGTCCGACTTGT 59.473 55.000 18.17 6.29 44.04 3.16
24 25 0.243907 AGATGGTCGTCCGACTTGTG 59.756 55.000 18.17 0.00 44.04 3.33
25 26 1.352156 GATGGTCGTCCGACTTGTGC 61.352 60.000 18.17 3.38 44.04 4.57
26 27 1.816863 ATGGTCGTCCGACTTGTGCT 61.817 55.000 18.17 0.00 44.04 4.40
27 28 1.733399 GGTCGTCCGACTTGTGCTC 60.733 63.158 18.17 0.00 44.04 4.26
28 29 1.733399 GTCGTCCGACTTGTGCTCC 60.733 63.158 12.31 0.00 41.57 4.70
29 30 2.197605 TCGTCCGACTTGTGCTCCA 61.198 57.895 0.00 0.00 0.00 3.86
30 31 1.079819 CGTCCGACTTGTGCTCCAT 60.080 57.895 0.00 0.00 0.00 3.41
31 32 1.078759 CGTCCGACTTGTGCTCCATC 61.079 60.000 0.00 0.00 0.00 3.51
32 33 1.078759 GTCCGACTTGTGCTCCATCG 61.079 60.000 0.00 0.00 0.00 3.84
33 34 2.456119 CCGACTTGTGCTCCATCGC 61.456 63.158 0.00 0.00 0.00 4.58
34 35 2.792290 CGACTTGTGCTCCATCGCG 61.792 63.158 0.00 0.00 0.00 5.87
35 36 3.088500 GACTTGTGCTCCATCGCGC 62.089 63.158 0.00 0.00 40.67 6.86
36 37 2.816958 CTTGTGCTCCATCGCGCT 60.817 61.111 5.56 0.00 40.87 5.92
37 38 2.806856 CTTGTGCTCCATCGCGCTC 61.807 63.158 5.56 0.00 40.87 5.03
41 42 4.873129 GCTCCATCGCGCTCGGAA 62.873 66.667 5.56 0.00 36.13 4.30
42 43 2.656651 CTCCATCGCGCTCGGAAG 60.657 66.667 5.56 0.00 36.13 3.46
43 44 4.207281 TCCATCGCGCTCGGAAGG 62.207 66.667 5.56 1.85 36.13 3.46
44 45 4.207281 CCATCGCGCTCGGAAGGA 62.207 66.667 5.56 0.00 36.13 3.36
45 46 2.656651 CATCGCGCTCGGAAGGAG 60.657 66.667 5.56 0.00 46.06 3.69
46 47 3.905678 ATCGCGCTCGGAAGGAGG 61.906 66.667 5.56 0.00 43.36 4.30
52 53 4.148825 CTCGGAAGGAGGCCCGTG 62.149 72.222 0.00 0.00 45.48 4.94
70 71 4.363990 CACGACAGTGCTCGGGCT 62.364 66.667 9.62 0.00 41.94 5.19
71 72 4.057428 ACGACAGTGCTCGGGCTC 62.057 66.667 9.62 4.54 38.02 4.70
72 73 4.803426 CGACAGTGCTCGGGCTCC 62.803 72.222 9.62 0.00 39.59 4.70
73 74 3.386237 GACAGTGCTCGGGCTCCT 61.386 66.667 9.62 0.50 39.59 3.69
74 75 2.925170 ACAGTGCTCGGGCTCCTT 60.925 61.111 9.62 0.00 39.59 3.36
75 76 2.125350 CAGTGCTCGGGCTCCTTC 60.125 66.667 9.62 0.00 39.59 3.46
76 77 3.394836 AGTGCTCGGGCTCCTTCC 61.395 66.667 9.62 0.00 39.59 3.46
79 80 4.516195 GCTCGGGCTCCTTCCGTC 62.516 72.222 0.00 0.00 46.82 4.79
80 81 4.194720 CTCGGGCTCCTTCCGTCG 62.195 72.222 2.42 0.00 46.82 5.12
93 94 0.386476 TCCGTCGGGAATCCATTACG 59.614 55.000 12.29 7.43 40.15 3.18
94 95 0.103572 CCGTCGGGAATCCATTACGT 59.896 55.000 15.59 0.00 33.90 3.57
95 96 1.484356 CGTCGGGAATCCATTACGTC 58.516 55.000 0.09 0.00 32.25 4.34
96 97 1.861971 GTCGGGAATCCATTACGTCC 58.138 55.000 0.09 0.00 0.00 4.79
97 98 0.386476 TCGGGAATCCATTACGTCCG 59.614 55.000 0.09 0.00 37.61 4.79
98 99 1.219522 CGGGAATCCATTACGTCCGC 61.220 60.000 0.09 0.00 0.00 5.54
99 100 0.883370 GGGAATCCATTACGTCCGCC 60.883 60.000 0.09 0.00 0.00 6.13
100 101 0.883370 GGAATCCATTACGTCCGCCC 60.883 60.000 0.00 0.00 0.00 6.13
101 102 0.179067 GAATCCATTACGTCCGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
102 103 0.253610 AATCCATTACGTCCGCCCAA 59.746 50.000 0.00 0.00 0.00 4.12
103 104 0.253610 ATCCATTACGTCCGCCCAAA 59.746 50.000 0.00 0.00 0.00 3.28
104 105 0.253610 TCCATTACGTCCGCCCAAAT 59.746 50.000 0.00 0.00 0.00 2.32
105 106 0.380378 CCATTACGTCCGCCCAAATG 59.620 55.000 0.00 0.00 0.00 2.32
106 107 0.380378 CATTACGTCCGCCCAAATGG 59.620 55.000 0.00 0.00 37.09 3.16
115 116 3.541072 CCCAAATGGCGCATGGAT 58.459 55.556 18.64 0.00 36.27 3.41
116 117 1.364901 CCCAAATGGCGCATGGATC 59.635 57.895 18.64 0.00 36.27 3.36
117 118 1.364901 CCAAATGGCGCATGGATCC 59.635 57.895 10.83 4.20 36.27 3.36
118 119 1.008194 CAAATGGCGCATGGATCCG 60.008 57.895 10.83 0.00 0.00 4.18
119 120 1.152984 AAATGGCGCATGGATCCGA 60.153 52.632 10.83 0.00 0.00 4.55
120 121 1.447317 AAATGGCGCATGGATCCGAC 61.447 55.000 10.83 0.00 0.00 4.79
121 122 4.889856 TGGCGCATGGATCCGACG 62.890 66.667 10.83 14.53 34.59 5.12
124 125 2.335011 CGCATGGATCCGACGCTA 59.665 61.111 7.39 0.00 0.00 4.26
125 126 1.730902 CGCATGGATCCGACGCTAG 60.731 63.158 7.39 0.00 0.00 3.42
126 127 1.373497 GCATGGATCCGACGCTAGG 60.373 63.158 7.39 0.00 0.00 3.02
127 128 1.373497 CATGGATCCGACGCTAGGC 60.373 63.158 7.39 0.00 0.00 3.93
128 129 2.574955 ATGGATCCGACGCTAGGCC 61.575 63.158 7.39 0.00 0.00 5.19
129 130 3.224324 GGATCCGACGCTAGGCCA 61.224 66.667 5.01 0.00 0.00 5.36
130 131 2.336809 GATCCGACGCTAGGCCAG 59.663 66.667 5.01 0.97 0.00 4.85
149 150 4.492160 CGTAGCTGCCTCGCCGAA 62.492 66.667 0.00 0.00 0.00 4.30
150 151 2.583593 GTAGCTGCCTCGCCGAAG 60.584 66.667 0.00 0.00 0.00 3.79
176 177 4.047059 GTCCGTCTGGCGTCCGAA 62.047 66.667 0.00 0.00 39.32 4.30
177 178 4.047059 TCCGTCTGGCGTCCGAAC 62.047 66.667 0.00 0.00 39.32 3.95
199 200 2.847234 TGGCGGACACAGAACCCT 60.847 61.111 0.00 0.00 0.00 4.34
200 201 2.047179 GGCGGACACAGAACCCTC 60.047 66.667 0.00 0.00 0.00 4.30
201 202 2.584391 GGCGGACACAGAACCCTCT 61.584 63.158 0.00 0.00 0.00 3.69
202 203 1.079750 GCGGACACAGAACCCTCTC 60.080 63.158 0.00 0.00 0.00 3.20
203 204 1.592223 CGGACACAGAACCCTCTCC 59.408 63.158 0.00 0.00 0.00 3.71
204 205 0.900647 CGGACACAGAACCCTCTCCT 60.901 60.000 0.00 0.00 0.00 3.69
205 206 1.353091 GGACACAGAACCCTCTCCTT 58.647 55.000 0.00 0.00 0.00 3.36
206 207 1.700186 GGACACAGAACCCTCTCCTTT 59.300 52.381 0.00 0.00 0.00 3.11
207 208 2.904434 GGACACAGAACCCTCTCCTTTA 59.096 50.000 0.00 0.00 0.00 1.85
208 209 3.055747 GGACACAGAACCCTCTCCTTTAG 60.056 52.174 0.00 0.00 0.00 1.85
209 210 2.303311 ACACAGAACCCTCTCCTTTAGC 59.697 50.000 0.00 0.00 0.00 3.09
210 211 1.550976 ACAGAACCCTCTCCTTTAGCG 59.449 52.381 0.00 0.00 0.00 4.26
211 212 0.537653 AGAACCCTCTCCTTTAGCGC 59.462 55.000 0.00 0.00 0.00 5.92
212 213 0.806492 GAACCCTCTCCTTTAGCGCG 60.806 60.000 0.00 0.00 0.00 6.86
213 214 1.542187 AACCCTCTCCTTTAGCGCGT 61.542 55.000 8.43 0.00 0.00 6.01
214 215 1.218316 CCCTCTCCTTTAGCGCGTT 59.782 57.895 8.43 3.54 0.00 4.84
215 216 1.084370 CCCTCTCCTTTAGCGCGTTG 61.084 60.000 8.43 0.00 0.00 4.10
216 217 0.108804 CCTCTCCTTTAGCGCGTTGA 60.109 55.000 8.43 0.00 0.00 3.18
217 218 1.272781 CTCTCCTTTAGCGCGTTGAG 58.727 55.000 8.43 4.71 0.00 3.02
218 219 0.736325 TCTCCTTTAGCGCGTTGAGC 60.736 55.000 8.43 0.00 43.95 4.26
228 229 2.480555 CGTTGAGCATTGGGACGC 59.519 61.111 0.00 0.00 0.00 5.19
229 230 2.324330 CGTTGAGCATTGGGACGCA 61.324 57.895 0.00 0.00 0.00 5.24
230 231 1.210155 GTTGAGCATTGGGACGCAC 59.790 57.895 0.00 0.00 0.00 5.34
231 232 1.971167 TTGAGCATTGGGACGCACC 60.971 57.895 0.00 0.00 38.08 5.01
232 233 2.359850 GAGCATTGGGACGCACCA 60.360 61.111 0.00 0.00 41.20 4.17
233 234 1.750399 GAGCATTGGGACGCACCAT 60.750 57.895 0.00 0.00 40.91 3.55
234 235 1.996786 GAGCATTGGGACGCACCATG 61.997 60.000 0.00 0.00 40.91 3.66
235 236 3.067480 GCATTGGGACGCACCATGG 62.067 63.158 11.19 11.19 40.91 3.66
236 237 2.044053 ATTGGGACGCACCATGGG 60.044 61.111 18.09 6.26 40.91 4.00
245 246 4.838152 CACCATGGGCCTCGTCCG 62.838 72.222 18.09 0.00 0.00 4.79
247 248 4.530857 CCATGGGCCTCGTCCGAC 62.531 72.222 2.85 0.00 0.00 4.79
248 249 3.770040 CATGGGCCTCGTCCGACA 61.770 66.667 4.53 0.00 0.00 4.35
249 250 3.000819 ATGGGCCTCGTCCGACAA 61.001 61.111 4.53 0.00 0.00 3.18
250 251 3.019003 ATGGGCCTCGTCCGACAAG 62.019 63.158 4.53 0.00 0.00 3.16
251 252 3.379445 GGGCCTCGTCCGACAAGA 61.379 66.667 0.84 0.00 0.00 3.02
252 253 2.654877 GGCCTCGTCCGACAAGAA 59.345 61.111 0.00 0.00 0.00 2.52
253 254 1.737008 GGCCTCGTCCGACAAGAAC 60.737 63.158 0.00 0.00 0.00 3.01
254 255 1.006571 GCCTCGTCCGACAAGAACA 60.007 57.895 0.00 0.00 0.00 3.18
255 256 0.389948 GCCTCGTCCGACAAGAACAT 60.390 55.000 0.00 0.00 0.00 2.71
256 257 1.350193 CCTCGTCCGACAAGAACATG 58.650 55.000 0.00 0.00 0.00 3.21
257 258 1.350193 CTCGTCCGACAAGAACATGG 58.650 55.000 0.00 0.00 0.00 3.66
258 259 0.669318 TCGTCCGACAAGAACATGGC 60.669 55.000 0.00 0.00 0.00 4.40
259 260 0.948623 CGTCCGACAAGAACATGGCA 60.949 55.000 0.00 0.00 0.00 4.92
260 261 0.517316 GTCCGACAAGAACATGGCAC 59.483 55.000 0.00 0.00 0.00 5.01
261 262 0.948623 TCCGACAAGAACATGGCACG 60.949 55.000 0.00 0.00 0.00 5.34
262 263 1.227999 CCGACAAGAACATGGCACGT 61.228 55.000 0.00 0.00 0.00 4.49
263 264 0.163788 CGACAAGAACATGGCACGTC 59.836 55.000 0.00 0.00 0.00 4.34
264 265 0.163788 GACAAGAACATGGCACGTCG 59.836 55.000 0.00 0.00 0.00 5.12
265 266 1.227999 ACAAGAACATGGCACGTCGG 61.228 55.000 0.00 0.00 0.00 4.79
266 267 1.671054 AAGAACATGGCACGTCGGG 60.671 57.895 0.00 0.00 0.00 5.14
267 268 3.799755 GAACATGGCACGTCGGGC 61.800 66.667 12.07 12.07 0.00 6.13
282 283 4.314440 GGCAGGCACCGAGTCACA 62.314 66.667 0.00 0.00 0.00 3.58
283 284 2.046892 GCAGGCACCGAGTCACAT 60.047 61.111 0.00 0.00 0.00 3.21
284 285 1.672356 GCAGGCACCGAGTCACATT 60.672 57.895 0.00 0.00 0.00 2.71
285 286 1.639298 GCAGGCACCGAGTCACATTC 61.639 60.000 0.00 0.00 0.00 2.67
286 287 0.036952 CAGGCACCGAGTCACATTCT 60.037 55.000 0.00 0.00 0.00 2.40
287 288 0.687354 AGGCACCGAGTCACATTCTT 59.313 50.000 0.00 0.00 0.00 2.52
288 289 1.079503 GGCACCGAGTCACATTCTTC 58.920 55.000 0.00 0.00 0.00 2.87
289 290 0.716108 GCACCGAGTCACATTCTTCG 59.284 55.000 0.00 0.00 0.00 3.79
290 291 1.350193 CACCGAGTCACATTCTTCGG 58.650 55.000 9.95 9.95 45.13 4.30
291 292 0.389948 ACCGAGTCACATTCTTCGGC 60.390 55.000 11.29 0.00 43.65 5.54
292 293 0.108615 CCGAGTCACATTCTTCGGCT 60.109 55.000 0.00 0.00 33.97 5.52
293 294 1.272781 CGAGTCACATTCTTCGGCTC 58.727 55.000 0.00 0.00 0.00 4.70
294 295 1.646189 GAGTCACATTCTTCGGCTCC 58.354 55.000 0.00 0.00 0.00 4.70
295 296 0.250513 AGTCACATTCTTCGGCTCCC 59.749 55.000 0.00 0.00 0.00 4.30
296 297 0.036388 GTCACATTCTTCGGCTCCCA 60.036 55.000 0.00 0.00 0.00 4.37
297 298 0.250234 TCACATTCTTCGGCTCCCAG 59.750 55.000 0.00 0.00 0.00 4.45
298 299 0.036010 CACATTCTTCGGCTCCCAGT 60.036 55.000 0.00 0.00 0.00 4.00
299 300 1.207089 CACATTCTTCGGCTCCCAGTA 59.793 52.381 0.00 0.00 0.00 2.74
300 301 2.119495 ACATTCTTCGGCTCCCAGTAT 58.881 47.619 0.00 0.00 0.00 2.12
301 302 2.158900 ACATTCTTCGGCTCCCAGTATG 60.159 50.000 0.00 0.00 0.00 2.39
314 315 2.051879 CAGTATGGCGTATCAGTCCG 57.948 55.000 0.00 0.00 0.00 4.79
315 316 1.607148 CAGTATGGCGTATCAGTCCGA 59.393 52.381 0.00 0.00 0.00 4.55
316 317 2.034179 CAGTATGGCGTATCAGTCCGAA 59.966 50.000 0.00 0.00 0.00 4.30
317 318 2.034305 AGTATGGCGTATCAGTCCGAAC 59.966 50.000 0.00 0.00 0.00 3.95
318 319 0.248907 ATGGCGTATCAGTCCGAACG 60.249 55.000 0.00 0.00 38.34 3.95
320 321 3.993103 CGTATCAGTCCGAACGCC 58.007 61.111 0.00 0.00 0.00 5.68
321 322 1.937846 CGTATCAGTCCGAACGCCG 60.938 63.158 0.00 0.00 38.18 6.46
322 323 2.103538 TATCAGTCCGAACGCCGC 59.896 61.111 0.00 0.00 36.84 6.53
323 324 2.702788 TATCAGTCCGAACGCCGCA 61.703 57.895 0.00 0.00 36.84 5.69
324 325 2.215465 TATCAGTCCGAACGCCGCAA 62.215 55.000 0.00 0.00 36.84 4.85
325 326 4.072088 CAGTCCGAACGCCGCAAC 62.072 66.667 0.00 0.00 36.84 4.17
331 332 4.811761 GAACGCCGCAACCGCATC 62.812 66.667 0.00 0.00 38.40 3.91
337 338 4.444024 CGCAACCGCATCGTGGTG 62.444 66.667 0.00 0.00 46.56 4.17
338 339 4.101790 GCAACCGCATCGTGGTGG 62.102 66.667 0.00 0.00 46.56 4.61
339 340 2.358125 CAACCGCATCGTGGTGGA 60.358 61.111 14.03 0.00 46.56 4.02
340 341 2.358247 AACCGCATCGTGGTGGAC 60.358 61.111 14.03 0.00 46.56 4.02
341 342 4.735132 ACCGCATCGTGGTGGACG 62.735 66.667 14.03 0.00 45.43 4.79
355 356 2.804090 GACGTCGACGGCTTGTCC 60.804 66.667 37.89 15.82 45.57 4.02
356 357 3.264866 GACGTCGACGGCTTGTCCT 62.265 63.158 37.89 17.54 45.57 3.85
357 358 1.915614 GACGTCGACGGCTTGTCCTA 61.916 60.000 37.89 0.00 45.57 2.94
358 359 1.226323 CGTCGACGGCTTGTCCTAG 60.226 63.158 29.70 0.00 45.23 3.02
359 360 1.139095 GTCGACGGCTTGTCCTAGG 59.861 63.158 0.82 0.82 45.23 3.02
360 361 1.001764 TCGACGGCTTGTCCTAGGA 60.002 57.895 7.62 7.62 45.23 2.94
361 362 1.139095 CGACGGCTTGTCCTAGGAC 59.861 63.158 31.61 31.61 45.23 3.85
380 381 2.134201 CGGATCCGTCATCGATTTGA 57.866 50.000 26.35 0.00 39.71 2.69
381 382 1.787155 CGGATCCGTCATCGATTTGAC 59.213 52.381 26.35 8.78 42.10 3.18
388 389 1.659098 GTCATCGATTTGACGTCCACC 59.341 52.381 14.12 0.00 36.93 4.61
389 390 0.645355 CATCGATTTGACGTCCACCG 59.355 55.000 14.12 11.28 44.03 4.94
390 391 0.459585 ATCGATTTGACGTCCACCGG 60.460 55.000 14.12 0.00 42.24 5.28
396 397 4.309950 GACGTCCACCGGCACCTT 62.310 66.667 3.51 0.00 46.74 3.50
397 398 3.819877 GACGTCCACCGGCACCTTT 62.820 63.158 3.51 0.00 46.74 3.11
398 399 3.047877 CGTCCACCGGCACCTTTC 61.048 66.667 0.00 0.00 0.00 2.62
399 400 3.047877 GTCCACCGGCACCTTTCG 61.048 66.667 0.00 0.00 0.00 3.46
402 403 3.055719 CACCGGCACCTTTCGCAT 61.056 61.111 0.00 0.00 0.00 4.73
403 404 2.282180 ACCGGCACCTTTCGCATT 60.282 55.556 0.00 0.00 0.00 3.56
404 405 1.901464 ACCGGCACCTTTCGCATTT 60.901 52.632 0.00 0.00 0.00 2.32
405 406 1.154035 CCGGCACCTTTCGCATTTC 60.154 57.895 0.00 0.00 0.00 2.17
406 407 1.511887 CGGCACCTTTCGCATTTCG 60.512 57.895 0.00 0.00 40.15 3.46
407 408 1.154035 GGCACCTTTCGCATTTCGG 60.154 57.895 0.00 0.00 39.05 4.30
408 409 1.154035 GCACCTTTCGCATTTCGGG 60.154 57.895 0.00 0.00 39.05 5.14
409 410 1.154035 CACCTTTCGCATTTCGGGC 60.154 57.895 0.00 0.00 39.05 6.13
410 411 1.303317 ACCTTTCGCATTTCGGGCT 60.303 52.632 0.00 0.00 39.05 5.19
411 412 1.305930 ACCTTTCGCATTTCGGGCTC 61.306 55.000 0.00 0.00 39.05 4.70
412 413 1.429423 CTTTCGCATTTCGGGCTCC 59.571 57.895 0.00 0.00 39.05 4.70
423 424 3.285371 GGGCTCCGACGAGAAAGA 58.715 61.111 0.00 0.00 38.52 2.52
424 425 1.139947 GGGCTCCGACGAGAAAGAG 59.860 63.158 0.00 0.00 38.52 2.85
425 426 1.596895 GGGCTCCGACGAGAAAGAGT 61.597 60.000 0.00 0.00 38.52 3.24
426 427 1.093159 GGCTCCGACGAGAAAGAGTA 58.907 55.000 0.00 0.00 38.52 2.59
427 428 1.064357 GGCTCCGACGAGAAAGAGTAG 59.936 57.143 0.00 0.00 38.52 2.57
428 429 1.064357 GCTCCGACGAGAAAGAGTAGG 59.936 57.143 0.00 0.00 38.52 3.18
429 430 1.671845 CTCCGACGAGAAAGAGTAGGG 59.328 57.143 0.00 0.00 38.52 3.53
430 431 0.100861 CCGACGAGAAAGAGTAGGGC 59.899 60.000 0.00 0.00 30.89 5.19
431 432 0.809385 CGACGAGAAAGAGTAGGGCA 59.191 55.000 0.00 0.00 0.00 5.36
432 433 1.405821 CGACGAGAAAGAGTAGGGCAT 59.594 52.381 0.00 0.00 0.00 4.40
433 434 2.796383 CGACGAGAAAGAGTAGGGCATG 60.796 54.545 0.00 0.00 0.00 4.06
434 435 2.427453 GACGAGAAAGAGTAGGGCATGA 59.573 50.000 0.00 0.00 0.00 3.07
435 436 2.428890 ACGAGAAAGAGTAGGGCATGAG 59.571 50.000 0.00 0.00 0.00 2.90
436 437 2.690497 CGAGAAAGAGTAGGGCATGAGA 59.310 50.000 0.00 0.00 0.00 3.27
437 438 3.243367 CGAGAAAGAGTAGGGCATGAGAG 60.243 52.174 0.00 0.00 0.00 3.20
438 439 3.957497 GAGAAAGAGTAGGGCATGAGAGA 59.043 47.826 0.00 0.00 0.00 3.10
439 440 4.555689 AGAAAGAGTAGGGCATGAGAGAT 58.444 43.478 0.00 0.00 0.00 2.75
440 441 4.344679 AGAAAGAGTAGGGCATGAGAGATG 59.655 45.833 0.00 0.00 0.00 2.90
441 442 2.607499 AGAGTAGGGCATGAGAGATGG 58.393 52.381 0.00 0.00 0.00 3.51
442 443 1.001860 GAGTAGGGCATGAGAGATGGC 59.998 57.143 0.00 0.00 42.96 4.40
443 444 0.320247 GTAGGGCATGAGAGATGGCG 60.320 60.000 0.00 0.00 44.39 5.69
444 445 0.469892 TAGGGCATGAGAGATGGCGA 60.470 55.000 0.00 0.00 44.39 5.54
445 446 1.596477 GGGCATGAGAGATGGCGAC 60.596 63.158 0.00 0.00 44.39 5.19
446 447 1.953138 GGCATGAGAGATGGCGACG 60.953 63.158 0.00 0.00 34.93 5.12
447 448 2.593134 GCATGAGAGATGGCGACGC 61.593 63.158 12.43 12.43 0.00 5.19
457 458 2.507324 GGCGACGCCTTGAGTCTC 60.507 66.667 31.30 0.96 46.69 3.36
458 459 2.876645 GCGACGCCTTGAGTCTCG 60.877 66.667 9.14 0.00 36.53 4.04
459 460 2.561885 CGACGCCTTGAGTCTCGT 59.438 61.111 0.00 0.00 36.53 4.18
460 461 1.797933 CGACGCCTTGAGTCTCGTG 60.798 63.158 0.00 0.00 36.53 4.35
461 462 1.579932 GACGCCTTGAGTCTCGTGA 59.420 57.895 0.00 0.00 35.12 4.35
462 463 0.455295 GACGCCTTGAGTCTCGTGAG 60.455 60.000 0.00 0.00 35.12 3.51
463 464 1.803519 CGCCTTGAGTCTCGTGAGC 60.804 63.158 0.00 0.00 0.00 4.26
464 465 1.446966 GCCTTGAGTCTCGTGAGCC 60.447 63.158 0.00 0.00 0.00 4.70
465 466 1.153939 CCTTGAGTCTCGTGAGCCG 60.154 63.158 0.00 0.00 38.13 5.52
466 467 1.153939 CTTGAGTCTCGTGAGCCGG 60.154 63.158 0.00 0.00 37.11 6.13
467 468 3.282745 TTGAGTCTCGTGAGCCGGC 62.283 63.158 21.89 21.89 37.11 6.13
468 469 3.444805 GAGTCTCGTGAGCCGGCT 61.445 66.667 33.48 33.48 37.11 5.52
469 470 3.404141 GAGTCTCGTGAGCCGGCTC 62.404 68.421 43.07 43.07 43.01 4.70
470 471 4.838486 GTCTCGTGAGCCGGCTCG 62.838 72.222 42.48 34.76 45.48 5.03
477 478 4.803426 GAGCCGGCTCGTGTCCAG 62.803 72.222 38.78 0.00 33.06 3.86
483 484 3.221222 GCTCGTGTCCAGCCCTAT 58.779 61.111 0.00 0.00 0.00 2.57
484 485 1.522569 GCTCGTGTCCAGCCCTATT 59.477 57.895 0.00 0.00 0.00 1.73
485 486 0.530870 GCTCGTGTCCAGCCCTATTC 60.531 60.000 0.00 0.00 0.00 1.75
486 487 1.115467 CTCGTGTCCAGCCCTATTCT 58.885 55.000 0.00 0.00 0.00 2.40
487 488 2.307768 CTCGTGTCCAGCCCTATTCTA 58.692 52.381 0.00 0.00 0.00 2.10
488 489 2.029623 TCGTGTCCAGCCCTATTCTAC 58.970 52.381 0.00 0.00 0.00 2.59
489 490 1.068741 CGTGTCCAGCCCTATTCTACC 59.931 57.143 0.00 0.00 0.00 3.18
490 491 2.399580 GTGTCCAGCCCTATTCTACCT 58.600 52.381 0.00 0.00 0.00 3.08
491 492 2.772515 GTGTCCAGCCCTATTCTACCTT 59.227 50.000 0.00 0.00 0.00 3.50
492 493 2.771943 TGTCCAGCCCTATTCTACCTTG 59.228 50.000 0.00 0.00 0.00 3.61
493 494 1.768870 TCCAGCCCTATTCTACCTTGC 59.231 52.381 0.00 0.00 0.00 4.01
494 495 1.202818 CCAGCCCTATTCTACCTTGCC 60.203 57.143 0.00 0.00 0.00 4.52
495 496 0.759346 AGCCCTATTCTACCTTGCCG 59.241 55.000 0.00 0.00 0.00 5.69
496 497 0.756903 GCCCTATTCTACCTTGCCGA 59.243 55.000 0.00 0.00 0.00 5.54
497 498 1.540580 GCCCTATTCTACCTTGCCGAC 60.541 57.143 0.00 0.00 0.00 4.79
498 499 1.269621 CCCTATTCTACCTTGCCGACG 60.270 57.143 0.00 0.00 0.00 5.12
499 500 1.679680 CCTATTCTACCTTGCCGACGA 59.320 52.381 0.00 0.00 0.00 4.20
500 501 2.296471 CCTATTCTACCTTGCCGACGAT 59.704 50.000 0.00 0.00 0.00 3.73
501 502 2.510768 ATTCTACCTTGCCGACGATC 57.489 50.000 0.00 0.00 0.00 3.69
502 503 0.099968 TTCTACCTTGCCGACGATCG 59.900 55.000 14.88 14.88 40.07 3.69
513 514 2.763930 CGACGATCGGACAAAAACTC 57.236 50.000 20.98 3.26 36.00 3.01
514 515 1.389106 CGACGATCGGACAAAAACTCC 59.611 52.381 20.98 0.00 36.00 3.85
521 522 1.145803 GGACAAAAACTCCGAGGACG 58.854 55.000 0.00 0.00 39.43 4.79
522 523 0.511653 GACAAAAACTCCGAGGACGC 59.488 55.000 0.00 0.00 38.29 5.19
523 524 1.219522 ACAAAAACTCCGAGGACGCG 61.220 55.000 3.53 3.53 38.29 6.01
524 525 2.315386 AAAAACTCCGAGGACGCGC 61.315 57.895 5.73 0.00 38.29 6.86
525 526 2.981977 AAAAACTCCGAGGACGCGCA 62.982 55.000 5.73 0.00 38.29 6.09
526 527 3.916392 AAACTCCGAGGACGCGCAG 62.916 63.158 5.73 2.42 38.29 5.18
579 580 4.388499 GCGGGGAGCGAAACTGGA 62.388 66.667 0.00 0.00 35.41 3.86
580 581 2.584608 CGGGGAGCGAAACTGGAT 59.415 61.111 0.00 0.00 0.00 3.41
581 582 1.815421 CGGGGAGCGAAACTGGATG 60.815 63.158 0.00 0.00 0.00 3.51
582 583 1.602237 GGGGAGCGAAACTGGATGA 59.398 57.895 0.00 0.00 0.00 2.92
583 584 0.035439 GGGGAGCGAAACTGGATGAA 60.035 55.000 0.00 0.00 0.00 2.57
584 585 1.373570 GGGAGCGAAACTGGATGAAG 58.626 55.000 0.00 0.00 0.00 3.02
585 586 0.729690 GGAGCGAAACTGGATGAAGC 59.270 55.000 0.00 0.00 0.00 3.86
586 587 1.677217 GGAGCGAAACTGGATGAAGCT 60.677 52.381 0.00 0.00 36.06 3.74
587 588 1.663135 GAGCGAAACTGGATGAAGCTC 59.337 52.381 0.00 0.00 41.92 4.09
588 589 0.729690 GCGAAACTGGATGAAGCTCC 59.270 55.000 0.00 0.00 35.74 4.70
589 590 1.002366 CGAAACTGGATGAAGCTCCG 58.998 55.000 0.00 0.00 38.21 4.63
590 591 0.729690 GAAACTGGATGAAGCTCCGC 59.270 55.000 0.00 0.00 38.21 5.54
591 592 0.326264 AAACTGGATGAAGCTCCGCT 59.674 50.000 0.00 0.00 42.56 5.52
592 593 0.107945 AACTGGATGAAGCTCCGCTC 60.108 55.000 0.00 0.00 38.25 5.03
593 594 1.591059 CTGGATGAAGCTCCGCTCG 60.591 63.158 0.00 0.00 38.25 5.03
594 595 2.009424 CTGGATGAAGCTCCGCTCGA 62.009 60.000 0.00 0.00 38.25 4.04
595 596 1.141881 GGATGAAGCTCCGCTCGAA 59.858 57.895 0.00 0.00 38.25 3.71
596 597 0.873743 GGATGAAGCTCCGCTCGAAG 60.874 60.000 0.00 0.00 38.25 3.79
597 598 0.101399 GATGAAGCTCCGCTCGAAGA 59.899 55.000 0.00 0.00 38.25 2.87
598 599 0.749649 ATGAAGCTCCGCTCGAAGAT 59.250 50.000 0.00 0.00 38.25 2.40
599 600 0.532573 TGAAGCTCCGCTCGAAGATT 59.467 50.000 0.00 0.00 38.25 2.40
600 601 0.926846 GAAGCTCCGCTCGAAGATTG 59.073 55.000 0.00 0.00 38.25 2.67
601 602 0.247736 AAGCTCCGCTCGAAGATTGT 59.752 50.000 0.00 0.00 38.25 2.71
602 603 0.247736 AGCTCCGCTCGAAGATTGTT 59.752 50.000 0.00 0.00 30.62 2.83
603 604 0.371645 GCTCCGCTCGAAGATTGTTG 59.628 55.000 0.00 0.00 33.89 3.33
604 605 1.714794 CTCCGCTCGAAGATTGTTGT 58.285 50.000 0.00 0.00 33.89 3.32
605 606 1.391485 CTCCGCTCGAAGATTGTTGTG 59.609 52.381 0.00 0.00 33.89 3.33
606 607 1.148310 CCGCTCGAAGATTGTTGTGT 58.852 50.000 0.00 0.00 33.89 3.72
607 608 1.531149 CCGCTCGAAGATTGTTGTGTT 59.469 47.619 0.00 0.00 33.89 3.32
608 609 2.563976 CGCTCGAAGATTGTTGTGTTG 58.436 47.619 0.00 0.00 33.89 3.33
609 610 2.310577 GCTCGAAGATTGTTGTGTTGC 58.689 47.619 0.00 0.00 33.89 4.17
610 611 2.286950 GCTCGAAGATTGTTGTGTTGCA 60.287 45.455 0.00 0.00 33.89 4.08
611 612 3.610114 GCTCGAAGATTGTTGTGTTGCAT 60.610 43.478 0.00 0.00 33.89 3.96
612 613 4.145876 TCGAAGATTGTTGTGTTGCATC 57.854 40.909 0.00 0.00 0.00 3.91
613 614 3.563390 TCGAAGATTGTTGTGTTGCATCA 59.437 39.130 0.00 0.00 0.00 3.07
614 615 4.036144 TCGAAGATTGTTGTGTTGCATCAA 59.964 37.500 0.00 0.00 40.00 2.57
615 616 4.739228 CGAAGATTGTTGTGTTGCATCAAA 59.261 37.500 0.00 0.00 39.40 2.69
616 617 5.403166 CGAAGATTGTTGTGTTGCATCAAAT 59.597 36.000 0.00 0.00 39.40 2.32
617 618 6.581919 CGAAGATTGTTGTGTTGCATCAAATA 59.418 34.615 0.00 0.00 39.40 1.40
618 619 7.114670 CGAAGATTGTTGTGTTGCATCAAATAA 59.885 33.333 0.00 2.61 39.40 1.40
619 620 8.836268 AAGATTGTTGTGTTGCATCAAATAAT 57.164 26.923 0.00 6.68 39.40 1.28
620 621 9.926158 AAGATTGTTGTGTTGCATCAAATAATA 57.074 25.926 0.00 0.00 39.40 0.98
623 624 9.656040 ATTGTTGTGTTGCATCAAATAATATGT 57.344 25.926 0.00 0.00 39.40 2.29
624 625 9.486497 TTGTTGTGTTGCATCAAATAATATGTT 57.514 25.926 0.00 0.00 34.81 2.71
625 626 9.486497 TGTTGTGTTGCATCAAATAATATGTTT 57.514 25.926 0.00 0.00 0.00 2.83
663 664 6.801539 TTAAGATATCCGGATGTGAAATGC 57.198 37.500 27.55 7.19 0.00 3.56
664 665 4.356405 AGATATCCGGATGTGAAATGCA 57.644 40.909 27.55 3.45 0.00 3.96
665 666 4.914983 AGATATCCGGATGTGAAATGCAT 58.085 39.130 27.55 8.78 0.00 3.96
666 667 5.319453 AGATATCCGGATGTGAAATGCATT 58.681 37.500 27.55 5.99 0.00 3.56
667 668 5.771666 AGATATCCGGATGTGAAATGCATTT 59.228 36.000 27.55 24.33 0.00 2.32
668 669 4.741321 ATCCGGATGTGAAATGCATTTT 57.259 36.364 24.81 9.87 0.00 1.82
669 670 4.533919 TCCGGATGTGAAATGCATTTTT 57.466 36.364 24.81 5.48 0.00 1.94
687 688 2.859870 TTTAAAACGTGATCGGTCGC 57.140 45.000 0.00 0.00 41.85 5.19
688 689 2.068837 TTAAAACGTGATCGGTCGCT 57.931 45.000 7.77 0.00 41.85 4.93
689 690 1.342555 TAAAACGTGATCGGTCGCTG 58.657 50.000 7.77 3.73 41.85 5.18
690 691 0.599204 AAAACGTGATCGGTCGCTGT 60.599 50.000 7.77 4.38 41.85 4.40
691 692 1.007336 AAACGTGATCGGTCGCTGTC 61.007 55.000 7.77 0.00 41.85 3.51
692 693 1.863662 AACGTGATCGGTCGCTGTCT 61.864 55.000 7.77 0.00 41.85 3.41
693 694 1.869574 CGTGATCGGTCGCTGTCTG 60.870 63.158 7.77 0.00 32.64 3.51
694 695 1.213013 GTGATCGGTCGCTGTCTGT 59.787 57.895 0.92 0.00 32.10 3.41
695 696 1.073216 GTGATCGGTCGCTGTCTGTG 61.073 60.000 0.92 0.00 32.10 3.66
696 697 1.517257 GATCGGTCGCTGTCTGTGG 60.517 63.158 0.00 0.00 0.00 4.17
697 698 1.934220 GATCGGTCGCTGTCTGTGGA 61.934 60.000 0.00 0.00 0.00 4.02
698 699 1.532604 ATCGGTCGCTGTCTGTGGAA 61.533 55.000 0.00 0.00 0.00 3.53
699 700 1.734477 CGGTCGCTGTCTGTGGAAG 60.734 63.158 0.00 0.00 0.00 3.46
700 701 2.029844 GGTCGCTGTCTGTGGAAGC 61.030 63.158 0.00 0.00 0.00 3.86
703 704 3.555428 GCTGTCTGTGGAAGCGTC 58.445 61.111 0.00 0.00 0.00 5.19
704 705 2.029844 GCTGTCTGTGGAAGCGTCC 61.030 63.158 12.27 12.27 45.21 4.79
734 735 5.651139 AGTAAATTGGCTACAGTCTACGAGA 59.349 40.000 0.00 0.00 0.00 4.04
759 760 0.237235 CATTCGGTGGTTTGGACGTG 59.763 55.000 0.00 0.00 0.00 4.49
794 795 4.697505 GCTCTGTGCTTTACGATTCGCG 62.698 54.545 5.86 0.00 41.79 5.87
847 865 0.400213 CCGGATGGCTATGGGCTAAA 59.600 55.000 0.00 0.00 41.46 1.85
860 878 1.592400 GGCTAAAGTGGGCCGGTTTC 61.592 60.000 1.90 0.00 38.91 2.78
863 881 0.475044 TAAAGTGGGCCGGTTTCAGT 59.525 50.000 1.90 0.00 0.00 3.41
895 916 4.520874 CAGCCAGGAGAAGAGTATATCGAA 59.479 45.833 0.00 0.00 0.00 3.71
898 919 5.241949 GCCAGGAGAAGAGTATATCGAAGAA 59.758 44.000 0.00 0.00 43.58 2.52
943 986 3.775654 CGAGGGGGTGGAGCAGTC 61.776 72.222 0.00 0.00 0.00 3.51
944 987 2.284995 GAGGGGGTGGAGCAGTCT 60.285 66.667 0.00 0.00 0.00 3.24
1127 1173 0.252835 GACCCCTACCCAGGTAACCA 60.253 60.000 0.00 0.00 40.79 3.67
1152 1198 0.533085 GCAGGGGTCCGATTTCTAGC 60.533 60.000 0.00 0.00 0.00 3.42
1185 1232 0.811616 CAGATCGCCTACCTGTTGCC 60.812 60.000 0.00 0.00 0.00 4.52
1188 1235 0.392998 ATCGCCTACCTGTTGCCTTG 60.393 55.000 0.00 0.00 0.00 3.61
1216 1263 6.064060 CCAGATTGATTGGGCTAGATTGTAA 58.936 40.000 0.00 0.00 31.87 2.41
1218 1265 6.769822 CAGATTGATTGGGCTAGATTGTAACT 59.230 38.462 0.00 0.00 0.00 2.24
1237 1284 5.767816 AACTGTGTTTAGGAATTGACCAC 57.232 39.130 0.00 0.00 0.00 4.16
1238 1285 3.813166 ACTGTGTTTAGGAATTGACCACG 59.187 43.478 0.00 0.00 0.00 4.94
1253 1300 1.202722 ACCACGGAATTCAGTTTCGGT 60.203 47.619 8.63 10.44 43.30 4.69
1298 1345 5.864418 TGTAGGGCTATTCGATTAGTTGT 57.136 39.130 14.13 3.92 0.00 3.32
1300 1347 6.046593 TGTAGGGCTATTCGATTAGTTGTTG 58.953 40.000 14.13 0.00 0.00 3.33
1329 1376 0.976641 TCTCTGGTGCCAGGTACAAG 59.023 55.000 17.23 7.95 43.75 3.16
1371 1425 2.762327 ACCGCGGAATCTTAGGTTTCTA 59.238 45.455 35.90 0.00 0.00 2.10
1380 1434 4.288670 TCTTAGGTTTCTAGATCACGCG 57.711 45.455 3.53 3.53 0.00 6.01
1381 1435 3.693085 TCTTAGGTTTCTAGATCACGCGT 59.307 43.478 5.58 5.58 0.00 6.01
1386 1440 3.435566 GTTTCTAGATCACGCGTCATGA 58.564 45.455 9.86 4.09 0.00 3.07
1394 1448 2.959516 TCACGCGTCATGAGAATTTCT 58.040 42.857 9.86 0.00 0.00 2.52
1401 1455 6.742718 ACGCGTCATGAGAATTTCTTAATTTG 59.257 34.615 5.58 0.00 34.16 2.32
1402 1456 6.195244 CGCGTCATGAGAATTTCTTAATTTGG 59.805 38.462 0.00 0.00 34.16 3.28
1457 1514 5.356470 GCATAGCCTTGTTCTTCTTCAGATT 59.644 40.000 0.00 0.00 0.00 2.40
1480 1537 2.136878 CCCTGCCTGATAGGACGCT 61.137 63.158 0.00 0.00 37.67 5.07
1495 1552 3.749609 AGGACGCTAATTTGTGTTGGTAC 59.250 43.478 7.51 0.00 0.00 3.34
1514 1571 4.909678 TGGCCAAACCATTCGTCA 57.090 50.000 0.61 0.00 46.36 4.35
1517 1574 1.595093 GGCCAAACCATTCGTCAGGG 61.595 60.000 0.00 0.00 38.86 4.45
1541 1598 5.269505 CTTCTACCTGAAGTACTGATGGG 57.730 47.826 0.00 0.00 45.26 4.00
1548 1605 4.020218 CCTGAAGTACTGATGGGTCTTTCA 60.020 45.833 0.00 0.00 0.00 2.69
1555 1612 4.111577 ACTGATGGGTCTTTCAGGGAATA 58.888 43.478 5.08 0.00 42.93 1.75
1557 1614 4.370776 TGATGGGTCTTTCAGGGAATAGA 58.629 43.478 0.00 0.00 0.00 1.98
1558 1615 4.164221 TGATGGGTCTTTCAGGGAATAGAC 59.836 45.833 0.00 0.00 33.42 2.59
1560 1617 4.175962 TGGGTCTTTCAGGGAATAGACTT 58.824 43.478 14.73 0.00 34.00 3.01
1562 1619 3.942115 GGTCTTTCAGGGAATAGACTTGC 59.058 47.826 14.73 0.00 34.00 4.01
1577 1688 9.346725 GAATAGACTTGCAAAATTCACCTTAAG 57.653 33.333 0.00 0.00 0.00 1.85
1618 1742 1.916181 CCCCAGACCAGGAAGTATTGT 59.084 52.381 0.00 0.00 0.00 2.71
1702 1826 2.799412 GAGATTCCTCTATGTTGCAGCG 59.201 50.000 0.00 0.00 36.50 5.18
1709 1833 3.871006 CCTCTATGTTGCAGCGTAATCAA 59.129 43.478 3.96 0.00 0.00 2.57
1716 1840 6.188400 TGTTGCAGCGTAATCAAATAATCA 57.812 33.333 0.00 0.00 0.00 2.57
1755 1880 3.238597 TGCCCTTTCCTATGTTTTGCTT 58.761 40.909 0.00 0.00 0.00 3.91
1791 1916 4.040584 ACTCTTTGGGTCTTCCTGTCTTAC 59.959 45.833 0.00 0.00 36.20 2.34
1881 2006 0.460811 TAGCCTCGCAATGAGCACAG 60.461 55.000 0.00 0.00 46.13 3.66
1884 2009 0.463295 CCTCGCAATGAGCACAGGAT 60.463 55.000 0.00 0.00 42.93 3.24
1885 2010 1.376543 CTCGCAATGAGCACAGGATT 58.623 50.000 0.00 0.00 46.13 3.01
1886 2011 2.554142 CTCGCAATGAGCACAGGATTA 58.446 47.619 0.00 0.00 46.13 1.75
1887 2012 2.938451 CTCGCAATGAGCACAGGATTAA 59.062 45.455 0.00 0.00 46.13 1.40
1888 2013 3.544684 TCGCAATGAGCACAGGATTAAT 58.455 40.909 0.00 0.00 46.13 1.40
1912 2042 4.354155 CGGACTCCTTGCGTTTCA 57.646 55.556 0.00 0.00 33.63 2.69
1961 2097 3.682858 CCATTTGAATGCTCTTTGCCTTG 59.317 43.478 0.00 0.00 42.00 3.61
2103 2239 0.396811 AAAGCCACAGTAGCGAAGGT 59.603 50.000 0.00 0.00 44.89 3.50
2166 2302 2.101640 TCCAGCCAGTATATGAGCCA 57.898 50.000 0.00 0.00 0.00 4.75
2169 2305 1.417517 CAGCCAGTATATGAGCCACCA 59.582 52.381 0.00 0.00 0.00 4.17
2267 2406 2.291540 GGGACATGGAAATGAGACCCAA 60.292 50.000 0.00 0.00 35.21 4.12
2271 2458 4.026052 ACATGGAAATGAGACCCAAATCC 58.974 43.478 0.00 0.00 35.39 3.01
2292 2503 3.095347 GCCTCCGAGGGACATGGAC 62.095 68.421 16.51 0.00 35.37 4.02
2309 2520 2.105128 CACGAGACCCAGATCCGC 59.895 66.667 0.00 0.00 0.00 5.54
2338 2549 0.326264 CCAGCCTAACCAAGCAGACT 59.674 55.000 0.00 0.00 0.00 3.24
2490 2701 2.240162 CTAACTGGGGGCTGGACGTC 62.240 65.000 7.13 7.13 0.00 4.34
2571 2782 3.247442 GAACGTAACCATCGTCATGTCA 58.753 45.455 0.00 0.00 40.69 3.58
2912 3124 8.504005 CGATTTTGATTTACTTCTGTACCACTT 58.496 33.333 0.00 0.00 0.00 3.16
2978 3219 2.964209 TCCAGGCCTACTATCTTCCAG 58.036 52.381 3.98 0.00 0.00 3.86
2979 3220 2.518407 TCCAGGCCTACTATCTTCCAGA 59.482 50.000 3.98 0.00 0.00 3.86
2980 3221 2.896685 CCAGGCCTACTATCTTCCAGAG 59.103 54.545 3.98 0.00 0.00 3.35
2981 3222 3.437198 CCAGGCCTACTATCTTCCAGAGA 60.437 52.174 3.98 0.00 39.13 3.10
2982 3223 4.415596 CAGGCCTACTATCTTCCAGAGAT 58.584 47.826 3.98 0.00 46.74 2.75
2983 3224 5.517477 CCAGGCCTACTATCTTCCAGAGATA 60.517 48.000 3.98 0.00 43.35 1.98
3005 3248 8.426489 AGATATTTTACTTGCGTAATACTCCCA 58.574 33.333 0.00 0.00 35.65 4.37
3008 3251 1.134907 ACTTGCGTAATACTCCCACCG 60.135 52.381 0.00 0.00 0.00 4.94
3021 3264 8.640063 AATACTCCCACCGTTTTTATTTACTT 57.360 30.769 0.00 0.00 0.00 2.24
3022 3265 6.321848 ACTCCCACCGTTTTTATTTACTTG 57.678 37.500 0.00 0.00 0.00 3.16
3023 3266 5.123805 TCCCACCGTTTTTATTTACTTGC 57.876 39.130 0.00 0.00 0.00 4.01
3024 3267 4.583489 TCCCACCGTTTTTATTTACTTGCA 59.417 37.500 0.00 0.00 0.00 4.08
3025 3268 5.244178 TCCCACCGTTTTTATTTACTTGCAT 59.756 36.000 0.00 0.00 0.00 3.96
3026 3269 6.433404 TCCCACCGTTTTTATTTACTTGCATA 59.567 34.615 0.00 0.00 0.00 3.14
3027 3270 7.122948 TCCCACCGTTTTTATTTACTTGCATAT 59.877 33.333 0.00 0.00 0.00 1.78
3029 3272 8.591312 CCACCGTTTTTATTTACTTGCATATTG 58.409 33.333 0.00 0.00 0.00 1.90
3043 3286 8.891671 ACTTGCATATTGAAATCAAACTTTGT 57.108 26.923 0.00 0.00 39.55 2.83
3044 3287 9.979578 ACTTGCATATTGAAATCAAACTTTGTA 57.020 25.926 0.00 0.00 39.55 2.41
3053 3296 9.567848 TTGAAATCAAACTTTGTAAAGTCTGAC 57.432 29.630 13.88 0.00 45.60 3.51
3054 3297 8.956426 TGAAATCAAACTTTGTAAAGTCTGACT 58.044 29.630 13.88 4.06 45.60 3.41
3058 3301 9.614792 ATCAAACTTTGTAAAGTCTGACTAAGT 57.385 29.630 13.88 13.07 45.60 2.24
3219 3467 2.547913 TGACGAAAGCTAATACGCGA 57.452 45.000 15.93 0.00 34.40 5.87
3223 3471 2.597305 ACGAAAGCTAATACGCGAACTG 59.403 45.455 15.93 0.00 34.40 3.16
3229 3477 6.897259 AAGCTAATACGCGAACTGAATAAA 57.103 33.333 15.93 0.00 34.40 1.40
3238 3486 4.094294 CGCGAACTGAATAAAAATGGAGGA 59.906 41.667 0.00 0.00 0.00 3.71
3243 3491 8.175716 CGAACTGAATAAAAATGGAGGAAGTAC 58.824 37.037 0.00 0.00 0.00 2.73
3253 3501 2.037251 TGGAGGAAGTACTGTTCTGTGC 59.963 50.000 0.00 0.00 0.00 4.57
3263 3511 9.245962 GAAGTACTGTTCTGTGCGTATTTATAT 57.754 33.333 0.00 0.00 0.00 0.86
3270 3518 9.051679 TGTTCTGTGCGTATTTATATGCTTATT 57.948 29.630 13.45 0.00 43.81 1.40
3441 3689 9.525826 ACATCCTCTGAATTTTGATTTACTTCT 57.474 29.630 0.00 0.00 0.00 2.85
3459 3707 5.279384 ACTTCTGTACTACTGTTTCGTGTG 58.721 41.667 0.00 0.00 0.00 3.82
3462 3710 6.564709 TCTGTACTACTGTTTCGTGTGTAT 57.435 37.500 0.00 0.00 0.00 2.29
3463 3711 7.671495 TCTGTACTACTGTTTCGTGTGTATA 57.329 36.000 0.00 0.00 0.00 1.47
3464 3712 8.272545 TCTGTACTACTGTTTCGTGTGTATAT 57.727 34.615 0.00 0.00 0.00 0.86
3465 3713 9.382275 TCTGTACTACTGTTTCGTGTGTATATA 57.618 33.333 0.00 0.00 0.00 0.86
3467 3715 9.940166 TGTACTACTGTTTCGTGTGTATATATG 57.060 33.333 0.00 0.00 0.00 1.78
3468 3716 7.925703 ACTACTGTTTCGTGTGTATATATGC 57.074 36.000 0.00 0.00 0.00 3.14
3469 3717 7.713750 ACTACTGTTTCGTGTGTATATATGCT 58.286 34.615 2.37 0.00 0.00 3.79
3470 3718 8.195436 ACTACTGTTTCGTGTGTATATATGCTT 58.805 33.333 2.37 0.00 0.00 3.91
3489 3737 2.684001 TATACAGTTTGCTGGGACCG 57.316 50.000 0.00 0.00 46.62 4.79
3490 3738 0.981183 ATACAGTTTGCTGGGACCGA 59.019 50.000 0.00 0.00 46.62 4.69
3491 3739 0.320374 TACAGTTTGCTGGGACCGAG 59.680 55.000 0.00 0.00 46.62 4.63
3493 3741 0.535102 CAGTTTGCTGGGACCGAGTT 60.535 55.000 5.32 0.00 39.01 3.01
3494 3742 0.250338 AGTTTGCTGGGACCGAGTTC 60.250 55.000 5.32 0.00 0.00 3.01
3496 3744 1.701031 TTTGCTGGGACCGAGTTCCA 61.701 55.000 5.32 4.26 39.18 3.53
3497 3745 1.701031 TTGCTGGGACCGAGTTCCAA 61.701 55.000 5.32 0.00 41.19 3.53
3498 3746 1.072505 GCTGGGACCGAGTTCCAAA 59.927 57.895 5.32 0.00 41.19 3.28
3499 3747 0.536460 GCTGGGACCGAGTTCCAAAA 60.536 55.000 5.32 0.00 41.19 2.44
3500 3748 1.523758 CTGGGACCGAGTTCCAAAAG 58.476 55.000 5.67 0.00 41.19 2.27
3501 3749 1.071699 CTGGGACCGAGTTCCAAAAGA 59.928 52.381 5.67 0.00 41.19 2.52
3502 3750 1.491332 TGGGACCGAGTTCCAAAAGAA 59.509 47.619 1.87 0.00 38.42 2.52
3503 3751 2.092321 TGGGACCGAGTTCCAAAAGAAA 60.092 45.455 1.87 0.00 38.42 2.52
3506 3754 4.038763 GGGACCGAGTTCCAAAAGAAATTT 59.961 41.667 0.00 0.00 37.40 1.82
3507 3755 5.452776 GGGACCGAGTTCCAAAAGAAATTTT 60.453 40.000 0.00 0.00 37.40 1.82
3508 3756 6.046593 GGACCGAGTTCCAAAAGAAATTTTT 58.953 36.000 0.00 0.00 35.85 1.94
3509 3757 7.204604 GGACCGAGTTCCAAAAGAAATTTTTA 58.795 34.615 0.00 0.00 35.85 1.52
3510 3758 7.870954 GGACCGAGTTCCAAAAGAAATTTTTAT 59.129 33.333 0.00 0.00 35.85 1.40
3511 3759 9.256477 GACCGAGTTCCAAAAGAAATTTTTATT 57.744 29.630 0.00 0.00 35.85 1.40
3512 3760 9.607988 ACCGAGTTCCAAAAGAAATTTTTATTT 57.392 25.926 0.00 0.00 35.85 1.40
3566 3814 4.709840 CAGTTCACTGGGGCTGAG 57.290 61.111 0.00 0.00 40.20 3.35
3567 3815 1.757306 CAGTTCACTGGGGCTGAGT 59.243 57.895 0.00 0.00 40.20 3.41
3569 3817 0.846693 AGTTCACTGGGGCTGAGTTT 59.153 50.000 0.00 0.00 0.00 2.66
3570 3818 0.954452 GTTCACTGGGGCTGAGTTTG 59.046 55.000 0.00 0.00 0.00 2.93
3572 3820 0.843309 TCACTGGGGCTGAGTTTGAA 59.157 50.000 0.00 0.00 0.00 2.69
3573 3821 1.202806 TCACTGGGGCTGAGTTTGAAG 60.203 52.381 0.00 0.00 0.00 3.02
3575 3823 0.538057 CTGGGGCTGAGTTTGAAGCA 60.538 55.000 0.00 0.00 41.36 3.91
3577 3825 1.246737 GGGGCTGAGTTTGAAGCAGG 61.247 60.000 0.00 0.00 41.36 4.85
3578 3826 0.538287 GGGCTGAGTTTGAAGCAGGT 60.538 55.000 0.00 0.00 41.36 4.00
3579 3827 0.877743 GGCTGAGTTTGAAGCAGGTC 59.122 55.000 0.00 0.00 41.36 3.85
3580 3828 1.544314 GGCTGAGTTTGAAGCAGGTCT 60.544 52.381 0.00 0.00 41.36 3.85
3581 3829 2.289694 GGCTGAGTTTGAAGCAGGTCTA 60.290 50.000 0.00 0.00 41.36 2.59
3582 3830 2.739379 GCTGAGTTTGAAGCAGGTCTAC 59.261 50.000 0.00 0.00 39.31 2.59
3585 3833 5.135508 TGAGTTTGAAGCAGGTCTACTAC 57.864 43.478 0.00 0.00 0.00 2.73
3586 3834 4.833380 TGAGTTTGAAGCAGGTCTACTACT 59.167 41.667 0.00 0.00 0.00 2.57
3589 3837 6.592870 AGTTTGAAGCAGGTCTACTACTTTT 58.407 36.000 0.00 0.00 32.89 2.27
3590 3838 6.706716 AGTTTGAAGCAGGTCTACTACTTTTC 59.293 38.462 0.00 0.00 32.89 2.29
3597 4004 7.875971 AGCAGGTCTACTACTTTTCATTTTTG 58.124 34.615 0.00 0.00 0.00 2.44
3603 4010 9.387123 GTCTACTACTTTTCATTTTTGAAGCAG 57.613 33.333 0.00 0.00 0.00 4.24
3608 4015 7.346751 ACTTTTCATTTTTGAAGCAGGTCTA 57.653 32.000 0.00 0.00 0.00 2.59
3609 4016 7.203218 ACTTTTCATTTTTGAAGCAGGTCTAC 58.797 34.615 0.00 0.00 0.00 2.59
3610 4017 6.959639 TTTCATTTTTGAAGCAGGTCTACT 57.040 33.333 0.00 0.00 0.00 2.57
3611 4018 8.458573 TTTTCATTTTTGAAGCAGGTCTACTA 57.541 30.769 0.00 0.00 0.00 1.82
3621 4028 5.394224 AGCAGGTCTACTACTCTTTTGTC 57.606 43.478 0.00 0.00 0.00 3.18
3624 4031 5.510861 GCAGGTCTACTACTCTTTTGTCCAA 60.511 44.000 0.00 0.00 0.00 3.53
3625 4032 6.522054 CAGGTCTACTACTCTTTTGTCCAAA 58.478 40.000 0.00 0.00 0.00 3.28
3627 4034 7.497909 CAGGTCTACTACTCTTTTGTCCAAAAA 59.502 37.037 6.65 0.00 39.49 1.94
3671 4080 3.247442 CGTAGTTGGAGTATTCGTTGCA 58.753 45.455 0.00 0.00 0.00 4.08
3672 4081 3.303495 CGTAGTTGGAGTATTCGTTGCAG 59.697 47.826 0.00 0.00 0.00 4.41
3673 4082 3.402628 AGTTGGAGTATTCGTTGCAGT 57.597 42.857 0.00 0.00 0.00 4.40
3674 4083 4.530710 AGTTGGAGTATTCGTTGCAGTA 57.469 40.909 0.00 0.00 0.00 2.74
3675 4084 5.086104 AGTTGGAGTATTCGTTGCAGTAT 57.914 39.130 0.00 0.00 0.00 2.12
3676 4085 4.870426 AGTTGGAGTATTCGTTGCAGTATG 59.130 41.667 0.00 0.00 40.87 2.39
3677 4086 3.792401 TGGAGTATTCGTTGCAGTATGG 58.208 45.455 0.00 0.00 35.86 2.74
3678 4087 3.131396 GGAGTATTCGTTGCAGTATGGG 58.869 50.000 0.00 0.00 35.86 4.00
3725 4134 2.615240 CCGTGGTCTGATTTGTGGATCA 60.615 50.000 0.00 0.00 34.96 2.92
3735 4144 7.172190 GTCTGATTTGTGGATCATCGATGTTAT 59.828 37.037 24.09 12.04 35.62 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.453379 TCGGACGACCATCTCCTCC 60.453 63.158 4.48 0.00 35.59 4.30
1 2 0.748729 AGTCGGACGACCATCTCCTC 60.749 60.000 19.92 0.00 45.59 3.71
2 3 0.323542 AAGTCGGACGACCATCTCCT 60.324 55.000 19.92 0.00 45.59 3.69
3 4 0.179134 CAAGTCGGACGACCATCTCC 60.179 60.000 19.92 0.00 45.59 3.71
4 5 0.526662 ACAAGTCGGACGACCATCTC 59.473 55.000 19.92 0.00 45.59 2.75
5 6 0.243907 CACAAGTCGGACGACCATCT 59.756 55.000 19.92 0.00 45.59 2.90
6 7 1.352156 GCACAAGTCGGACGACCATC 61.352 60.000 19.92 3.42 45.59 3.51
7 8 1.374252 GCACAAGTCGGACGACCAT 60.374 57.895 19.92 7.95 45.59 3.55
8 9 2.028484 GCACAAGTCGGACGACCA 59.972 61.111 19.92 0.00 45.59 4.02
9 10 1.733399 GAGCACAAGTCGGACGACC 60.733 63.158 19.92 5.70 45.59 4.79
10 11 1.733399 GGAGCACAAGTCGGACGAC 60.733 63.158 16.39 16.39 44.86 4.34
11 12 1.532604 ATGGAGCACAAGTCGGACGA 61.533 55.000 1.89 0.00 0.00 4.20
12 13 1.078759 GATGGAGCACAAGTCGGACG 61.079 60.000 1.89 0.00 0.00 4.79
13 14 1.078759 CGATGGAGCACAAGTCGGAC 61.079 60.000 0.00 0.00 0.00 4.79
14 15 1.215382 CGATGGAGCACAAGTCGGA 59.785 57.895 0.00 0.00 0.00 4.55
15 16 2.456119 GCGATGGAGCACAAGTCGG 61.456 63.158 6.57 0.00 37.05 4.79
16 17 2.792290 CGCGATGGAGCACAAGTCG 61.792 63.158 0.00 0.00 36.85 4.18
17 18 3.084579 CGCGATGGAGCACAAGTC 58.915 61.111 0.00 0.00 36.85 3.01
18 19 3.121030 GCGCGATGGAGCACAAGT 61.121 61.111 12.10 0.00 38.98 3.16
19 20 2.806856 GAGCGCGATGGAGCACAAG 61.807 63.158 12.10 0.00 41.93 3.16
20 21 2.815211 GAGCGCGATGGAGCACAA 60.815 61.111 12.10 0.00 41.93 3.33
24 25 4.873129 TTCCGAGCGCGATGGAGC 62.873 66.667 12.10 0.00 40.82 4.70
25 26 2.656651 CTTCCGAGCGCGATGGAG 60.657 66.667 12.10 0.00 40.82 3.86
26 27 4.207281 CCTTCCGAGCGCGATGGA 62.207 66.667 12.10 11.23 40.82 3.41
27 28 4.207281 TCCTTCCGAGCGCGATGG 62.207 66.667 12.10 4.15 40.82 3.51
28 29 2.656651 CTCCTTCCGAGCGCGATG 60.657 66.667 12.10 0.00 40.82 3.84
29 30 3.905678 CCTCCTTCCGAGCGCGAT 61.906 66.667 12.10 1.23 40.82 4.58
53 54 4.363990 AGCCCGAGCACTGTCGTG 62.364 66.667 0.00 0.00 43.56 4.35
54 55 4.057428 GAGCCCGAGCACTGTCGT 62.057 66.667 0.00 0.00 43.56 4.34
55 56 4.803426 GGAGCCCGAGCACTGTCG 62.803 72.222 0.00 0.00 43.56 4.35
56 57 2.844072 GAAGGAGCCCGAGCACTGTC 62.844 65.000 0.00 0.00 43.56 3.51
57 58 2.925170 AAGGAGCCCGAGCACTGT 60.925 61.111 0.00 0.00 43.56 3.55
58 59 2.125350 GAAGGAGCCCGAGCACTG 60.125 66.667 0.00 0.00 43.56 3.66
59 60 3.394836 GGAAGGAGCCCGAGCACT 61.395 66.667 0.00 0.00 43.56 4.40
67 68 3.387947 TTCCCGACGGAAGGAGCC 61.388 66.667 17.49 0.00 43.57 4.70
74 75 0.386476 CGTAATGGATTCCCGACGGA 59.614 55.000 17.49 0.00 34.20 4.69
75 76 0.103572 ACGTAATGGATTCCCGACGG 59.896 55.000 19.24 6.99 38.90 4.79
76 77 1.484356 GACGTAATGGATTCCCGACG 58.516 55.000 15.58 15.58 39.81 5.12
77 78 1.861971 GGACGTAATGGATTCCCGAC 58.138 55.000 0.00 0.00 34.29 4.79
78 79 0.386476 CGGACGTAATGGATTCCCGA 59.614 55.000 0.00 0.00 37.87 5.14
79 80 1.219522 GCGGACGTAATGGATTCCCG 61.220 60.000 0.00 2.50 38.58 5.14
80 81 0.883370 GGCGGACGTAATGGATTCCC 60.883 60.000 0.00 0.00 0.00 3.97
81 82 0.883370 GGGCGGACGTAATGGATTCC 60.883 60.000 0.00 0.00 0.00 3.01
82 83 0.179067 TGGGCGGACGTAATGGATTC 60.179 55.000 0.00 0.00 0.00 2.52
83 84 0.253610 TTGGGCGGACGTAATGGATT 59.746 50.000 0.00 0.00 0.00 3.01
84 85 0.253610 TTTGGGCGGACGTAATGGAT 59.746 50.000 0.00 0.00 0.00 3.41
85 86 0.253610 ATTTGGGCGGACGTAATGGA 59.746 50.000 0.00 0.00 0.00 3.41
86 87 0.380378 CATTTGGGCGGACGTAATGG 59.620 55.000 0.00 0.00 0.00 3.16
87 88 0.380378 CCATTTGGGCGGACGTAATG 59.620 55.000 0.00 0.00 0.00 1.90
88 89 2.788515 CCATTTGGGCGGACGTAAT 58.211 52.632 0.00 0.00 0.00 1.89
89 90 4.305011 CCATTTGGGCGGACGTAA 57.695 55.556 0.00 0.00 0.00 3.18
98 99 1.364901 GATCCATGCGCCATTTGGG 59.635 57.895 4.18 0.00 40.85 4.12
99 100 1.364901 GGATCCATGCGCCATTTGG 59.635 57.895 6.95 7.21 38.53 3.28
100 101 1.008194 CGGATCCATGCGCCATTTG 60.008 57.895 13.41 0.00 34.26 2.32
101 102 1.152984 TCGGATCCATGCGCCATTT 60.153 52.632 13.41 0.00 41.60 2.32
102 103 1.893808 GTCGGATCCATGCGCCATT 60.894 57.895 13.41 0.00 41.60 3.16
103 104 2.281070 GTCGGATCCATGCGCCAT 60.281 61.111 13.41 0.00 41.60 4.40
104 105 4.889856 CGTCGGATCCATGCGCCA 62.890 66.667 13.41 0.00 41.60 5.69
107 108 1.730902 CTAGCGTCGGATCCATGCG 60.731 63.158 13.41 13.31 43.28 4.73
108 109 1.373497 CCTAGCGTCGGATCCATGC 60.373 63.158 13.41 15.18 0.00 4.06
109 110 1.373497 GCCTAGCGTCGGATCCATG 60.373 63.158 13.41 5.84 0.00 3.66
110 111 2.574955 GGCCTAGCGTCGGATCCAT 61.575 63.158 13.41 0.00 0.00 3.41
111 112 3.224324 GGCCTAGCGTCGGATCCA 61.224 66.667 13.41 0.00 0.00 3.41
112 113 3.214250 CTGGCCTAGCGTCGGATCC 62.214 68.421 3.32 0.00 0.00 3.36
113 114 2.336809 CTGGCCTAGCGTCGGATC 59.663 66.667 3.32 0.00 0.00 3.36
114 115 3.917760 GCTGGCCTAGCGTCGGAT 61.918 66.667 3.32 0.00 43.63 4.18
132 133 4.492160 TTCGGCGAGGCAGCTACG 62.492 66.667 10.46 7.25 37.29 3.51
133 134 2.583593 CTTCGGCGAGGCAGCTAC 60.584 66.667 10.46 0.00 37.29 3.58
134 135 3.838271 CCTTCGGCGAGGCAGCTA 61.838 66.667 14.12 0.00 37.29 3.32
178 179 4.980805 TTCTGTGTCCGCCACCGC 62.981 66.667 1.62 0.00 43.85 5.68
179 180 3.041940 GTTCTGTGTCCGCCACCG 61.042 66.667 1.62 0.00 43.85 4.94
180 181 2.668550 GGTTCTGTGTCCGCCACC 60.669 66.667 1.62 0.00 43.85 4.61
181 182 2.668550 GGGTTCTGTGTCCGCCAC 60.669 66.667 0.00 0.00 44.78 5.01
182 183 2.847234 AGGGTTCTGTGTCCGCCA 60.847 61.111 0.00 0.00 0.00 5.69
183 184 2.047179 GAGGGTTCTGTGTCCGCC 60.047 66.667 0.00 0.00 0.00 6.13
184 185 1.079750 GAGAGGGTTCTGTGTCCGC 60.080 63.158 0.00 0.00 32.53 5.54
185 186 0.900647 AGGAGAGGGTTCTGTGTCCG 60.901 60.000 0.00 0.00 32.53 4.79
186 187 1.353091 AAGGAGAGGGTTCTGTGTCC 58.647 55.000 0.00 0.00 32.53 4.02
187 188 3.617775 GCTAAAGGAGAGGGTTCTGTGTC 60.618 52.174 0.00 0.00 32.53 3.67
188 189 2.303311 GCTAAAGGAGAGGGTTCTGTGT 59.697 50.000 0.00 0.00 32.53 3.72
189 190 2.675317 CGCTAAAGGAGAGGGTTCTGTG 60.675 54.545 0.00 0.00 32.53 3.66
190 191 1.550976 CGCTAAAGGAGAGGGTTCTGT 59.449 52.381 0.00 0.00 32.53 3.41
191 192 1.740718 GCGCTAAAGGAGAGGGTTCTG 60.741 57.143 0.00 0.00 32.53 3.02
192 193 0.537653 GCGCTAAAGGAGAGGGTTCT 59.462 55.000 0.00 0.00 36.01 3.01
193 194 0.806492 CGCGCTAAAGGAGAGGGTTC 60.806 60.000 5.56 0.00 33.87 3.62
194 195 1.218316 CGCGCTAAAGGAGAGGGTT 59.782 57.895 5.56 0.00 33.87 4.11
195 196 1.982938 ACGCGCTAAAGGAGAGGGT 60.983 57.895 5.73 0.00 44.59 4.34
196 197 1.084370 CAACGCGCTAAAGGAGAGGG 61.084 60.000 5.73 0.00 42.62 4.30
197 198 0.108804 TCAACGCGCTAAAGGAGAGG 60.109 55.000 5.73 0.00 0.00 3.69
198 199 1.272781 CTCAACGCGCTAAAGGAGAG 58.727 55.000 5.73 0.00 0.00 3.20
199 200 0.736325 GCTCAACGCGCTAAAGGAGA 60.736 55.000 5.73 0.00 0.00 3.71
200 201 1.014044 TGCTCAACGCGCTAAAGGAG 61.014 55.000 5.73 5.46 43.27 3.69
201 202 0.391130 ATGCTCAACGCGCTAAAGGA 60.391 50.000 5.73 0.00 43.27 3.36
202 203 0.447801 AATGCTCAACGCGCTAAAGG 59.552 50.000 5.73 0.00 43.27 3.11
203 204 1.527696 CAATGCTCAACGCGCTAAAG 58.472 50.000 5.73 0.00 43.27 1.85
204 205 0.167908 CCAATGCTCAACGCGCTAAA 59.832 50.000 5.73 0.00 43.27 1.85
205 206 1.643868 CCCAATGCTCAACGCGCTAA 61.644 55.000 5.73 0.00 43.27 3.09
206 207 2.106074 CCCAATGCTCAACGCGCTA 61.106 57.895 5.73 0.00 43.27 4.26
207 208 3.434319 CCCAATGCTCAACGCGCT 61.434 61.111 5.73 0.00 43.27 5.92
208 209 3.430862 TCCCAATGCTCAACGCGC 61.431 61.111 5.73 0.00 43.27 6.86
209 210 2.480555 GTCCCAATGCTCAACGCG 59.519 61.111 3.53 3.53 43.27 6.01
210 211 2.480555 CGTCCCAATGCTCAACGC 59.519 61.111 0.00 0.00 39.77 4.84
211 212 2.324330 TGCGTCCCAATGCTCAACG 61.324 57.895 0.00 0.00 38.30 4.10
212 213 1.210155 GTGCGTCCCAATGCTCAAC 59.790 57.895 0.00 0.00 38.30 3.18
213 214 1.971167 GGTGCGTCCCAATGCTCAA 60.971 57.895 0.00 0.00 38.30 3.02
214 215 2.359850 GGTGCGTCCCAATGCTCA 60.360 61.111 0.00 0.00 38.30 4.26
215 216 1.750399 ATGGTGCGTCCCAATGCTC 60.750 57.895 0.00 0.00 38.20 4.26
216 217 2.048023 CATGGTGCGTCCCAATGCT 61.048 57.895 0.00 0.00 38.20 3.79
217 218 2.491152 CATGGTGCGTCCCAATGC 59.509 61.111 0.00 0.00 38.20 3.56
218 219 2.417257 CCCATGGTGCGTCCCAATG 61.417 63.158 11.73 0.35 38.20 2.82
219 220 2.044053 CCCATGGTGCGTCCCAAT 60.044 61.111 11.73 0.00 38.20 3.16
228 229 4.838152 CGGACGAGGCCCATGGTG 62.838 72.222 11.73 3.26 0.00 4.17
230 231 4.530857 GTCGGACGAGGCCCATGG 62.531 72.222 4.14 4.14 0.00 3.66
231 232 3.309436 TTGTCGGACGAGGCCCATG 62.309 63.158 0.00 0.00 0.00 3.66
232 233 3.000819 TTGTCGGACGAGGCCCAT 61.001 61.111 0.00 0.00 0.00 4.00
233 234 3.691342 CTTGTCGGACGAGGCCCA 61.691 66.667 16.27 0.00 0.00 5.36
234 235 2.939261 TTCTTGTCGGACGAGGCCC 61.939 63.158 22.14 0.00 30.44 5.80
235 236 1.737008 GTTCTTGTCGGACGAGGCC 60.737 63.158 22.14 11.22 30.44 5.19
236 237 0.389948 ATGTTCTTGTCGGACGAGGC 60.390 55.000 22.14 16.19 30.44 4.70
237 238 1.350193 CATGTTCTTGTCGGACGAGG 58.650 55.000 22.14 6.95 30.44 4.63
238 239 1.350193 CCATGTTCTTGTCGGACGAG 58.650 55.000 17.67 17.67 0.00 4.18
239 240 0.669318 GCCATGTTCTTGTCGGACGA 60.669 55.000 3.34 0.15 0.00 4.20
240 241 0.948623 TGCCATGTTCTTGTCGGACG 60.949 55.000 3.34 0.00 0.00 4.79
241 242 0.517316 GTGCCATGTTCTTGTCGGAC 59.483 55.000 0.00 0.00 0.00 4.79
242 243 0.948623 CGTGCCATGTTCTTGTCGGA 60.949 55.000 0.00 0.00 0.00 4.55
243 244 1.227999 ACGTGCCATGTTCTTGTCGG 61.228 55.000 0.00 0.00 0.00 4.79
244 245 0.163788 GACGTGCCATGTTCTTGTCG 59.836 55.000 0.00 0.00 0.00 4.35
245 246 0.163788 CGACGTGCCATGTTCTTGTC 59.836 55.000 0.00 0.00 0.00 3.18
246 247 1.227999 CCGACGTGCCATGTTCTTGT 61.228 55.000 0.00 0.00 0.00 3.16
247 248 1.497278 CCGACGTGCCATGTTCTTG 59.503 57.895 0.00 0.00 0.00 3.02
248 249 1.671054 CCCGACGTGCCATGTTCTT 60.671 57.895 0.00 0.00 0.00 2.52
249 250 2.047274 CCCGACGTGCCATGTTCT 60.047 61.111 0.00 0.00 0.00 3.01
250 251 3.799755 GCCCGACGTGCCATGTTC 61.800 66.667 0.00 0.00 0.00 3.18
251 252 4.634703 TGCCCGACGTGCCATGTT 62.635 61.111 0.00 0.00 0.00 2.71
265 266 3.612247 ATGTGACTCGGTGCCTGCC 62.612 63.158 0.00 0.00 0.00 4.85
266 267 1.639298 GAATGTGACTCGGTGCCTGC 61.639 60.000 0.00 0.00 0.00 4.85
267 268 0.036952 AGAATGTGACTCGGTGCCTG 60.037 55.000 0.00 0.00 0.00 4.85
268 269 0.687354 AAGAATGTGACTCGGTGCCT 59.313 50.000 0.00 0.00 0.00 4.75
269 270 1.079503 GAAGAATGTGACTCGGTGCC 58.920 55.000 0.00 0.00 0.00 5.01
270 271 0.716108 CGAAGAATGTGACTCGGTGC 59.284 55.000 0.00 0.00 0.00 5.01
271 272 1.350193 CCGAAGAATGTGACTCGGTG 58.650 55.000 2.46 0.00 36.18 4.94
272 273 0.389948 GCCGAAGAATGTGACTCGGT 60.390 55.000 11.11 0.00 42.09 4.69
273 274 0.108615 AGCCGAAGAATGTGACTCGG 60.109 55.000 5.92 5.92 42.86 4.63
274 275 1.272781 GAGCCGAAGAATGTGACTCG 58.727 55.000 0.00 0.00 0.00 4.18
275 276 1.646189 GGAGCCGAAGAATGTGACTC 58.354 55.000 0.00 0.00 0.00 3.36
276 277 0.250513 GGGAGCCGAAGAATGTGACT 59.749 55.000 0.00 0.00 0.00 3.41
277 278 0.036388 TGGGAGCCGAAGAATGTGAC 60.036 55.000 0.00 0.00 0.00 3.67
278 279 0.250234 CTGGGAGCCGAAGAATGTGA 59.750 55.000 0.00 0.00 0.00 3.58
279 280 0.036010 ACTGGGAGCCGAAGAATGTG 60.036 55.000 0.00 0.00 0.00 3.21
280 281 1.568504 TACTGGGAGCCGAAGAATGT 58.431 50.000 0.00 0.00 0.00 2.71
281 282 2.487934 CATACTGGGAGCCGAAGAATG 58.512 52.381 0.00 0.00 0.00 2.67
282 283 1.417890 CCATACTGGGAGCCGAAGAAT 59.582 52.381 0.00 0.00 32.67 2.40
283 284 0.830648 CCATACTGGGAGCCGAAGAA 59.169 55.000 0.00 0.00 32.67 2.52
284 285 1.686325 GCCATACTGGGAGCCGAAGA 61.686 60.000 0.00 0.00 38.19 2.87
285 286 1.227674 GCCATACTGGGAGCCGAAG 60.228 63.158 0.00 0.00 38.19 3.79
286 287 2.908015 GCCATACTGGGAGCCGAA 59.092 61.111 0.00 0.00 38.19 4.30
287 288 2.914756 TACGCCATACTGGGAGCCGA 62.915 60.000 0.00 0.00 38.19 5.54
288 289 1.816863 ATACGCCATACTGGGAGCCG 61.817 60.000 0.00 0.00 38.19 5.52
289 290 0.037232 GATACGCCATACTGGGAGCC 60.037 60.000 0.00 0.00 38.19 4.70
290 291 0.679505 TGATACGCCATACTGGGAGC 59.320 55.000 0.00 0.00 38.19 4.70
291 292 1.964223 ACTGATACGCCATACTGGGAG 59.036 52.381 0.00 0.00 38.19 4.30
292 293 1.961394 GACTGATACGCCATACTGGGA 59.039 52.381 0.00 0.00 38.19 4.37
293 294 1.000955 GGACTGATACGCCATACTGGG 59.999 57.143 0.00 0.00 38.19 4.45
294 295 1.335964 CGGACTGATACGCCATACTGG 60.336 57.143 0.00 0.00 41.55 4.00
295 296 1.607148 TCGGACTGATACGCCATACTG 59.393 52.381 0.00 0.00 29.42 2.74
296 297 1.977056 TCGGACTGATACGCCATACT 58.023 50.000 0.00 0.00 29.42 2.12
297 298 2.391879 GTTCGGACTGATACGCCATAC 58.608 52.381 0.00 0.00 29.42 2.39
298 299 1.002142 CGTTCGGACTGATACGCCATA 60.002 52.381 0.00 0.00 29.42 2.74
299 300 0.248907 CGTTCGGACTGATACGCCAT 60.249 55.000 0.00 0.00 29.42 4.40
300 301 1.138036 CGTTCGGACTGATACGCCA 59.862 57.895 0.00 0.00 29.42 5.69
301 302 2.228914 GCGTTCGGACTGATACGCC 61.229 63.158 22.54 11.77 44.19 5.68
302 303 2.228914 GGCGTTCGGACTGATACGC 61.229 63.158 23.88 23.88 46.62 4.42
303 304 1.937846 CGGCGTTCGGACTGATACG 60.938 63.158 0.00 12.02 35.56 3.06
304 305 2.228914 GCGGCGTTCGGACTGATAC 61.229 63.158 9.37 0.00 39.69 2.24
305 306 2.103538 GCGGCGTTCGGACTGATA 59.896 61.111 9.37 0.00 39.69 2.15
306 307 3.583276 TTGCGGCGTTCGGACTGAT 62.583 57.895 9.37 0.00 39.39 2.90
307 308 4.287781 TTGCGGCGTTCGGACTGA 62.288 61.111 9.37 0.00 39.39 3.41
308 309 4.072088 GTTGCGGCGTTCGGACTG 62.072 66.667 9.37 0.00 39.39 3.51
321 322 4.101790 CCACCACGATGCGGTTGC 62.102 66.667 0.00 0.00 43.20 4.17
322 323 2.358125 TCCACCACGATGCGGTTG 60.358 61.111 0.00 0.00 33.25 3.77
323 324 2.358247 GTCCACCACGATGCGGTT 60.358 61.111 0.00 0.00 33.25 4.44
334 335 4.353437 AAGCCGTCGACGTCCACC 62.353 66.667 33.49 17.06 37.74 4.61
335 336 3.103911 CAAGCCGTCGACGTCCAC 61.104 66.667 33.49 20.47 37.74 4.02
336 337 3.547249 GACAAGCCGTCGACGTCCA 62.547 63.158 33.49 0.00 37.74 4.02
337 338 2.804090 GACAAGCCGTCGACGTCC 60.804 66.667 33.49 23.99 37.74 4.79
338 339 1.915614 TAGGACAAGCCGTCGACGTC 61.916 60.000 33.49 24.14 46.42 4.34
339 340 1.919956 CTAGGACAAGCCGTCGACGT 61.920 60.000 33.49 17.19 46.42 4.34
340 341 1.226323 CTAGGACAAGCCGTCGACG 60.226 63.158 30.33 30.33 46.42 5.12
341 342 1.139095 CCTAGGACAAGCCGTCGAC 59.861 63.158 1.05 5.18 46.42 4.20
342 343 1.001764 TCCTAGGACAAGCCGTCGA 60.002 57.895 7.62 0.00 46.42 4.20
343 344 1.139095 GTCCTAGGACAAGCCGTCG 59.861 63.158 32.91 0.00 46.42 5.12
344 345 1.139095 CGTCCTAGGACAAGCCGTC 59.861 63.158 35.32 11.62 44.77 4.79
345 346 2.348888 CCGTCCTAGGACAAGCCGT 61.349 63.158 35.32 0.00 44.77 5.68
346 347 1.392710 ATCCGTCCTAGGACAAGCCG 61.393 60.000 35.32 23.38 44.07 5.52
347 348 0.389757 GATCCGTCCTAGGACAAGCC 59.610 60.000 35.32 20.22 44.07 4.35
348 349 0.389757 GGATCCGTCCTAGGACAAGC 59.610 60.000 35.32 25.95 44.07 4.01
349 350 0.669077 CGGATCCGTCCTAGGACAAG 59.331 60.000 35.32 26.89 44.07 3.16
350 351 2.803203 CGGATCCGTCCTAGGACAA 58.197 57.895 35.32 25.05 44.07 3.18
351 352 4.573210 CGGATCCGTCCTAGGACA 57.427 61.111 35.32 21.30 44.07 4.02
361 362 1.787155 GTCAAATCGATGACGGATCCG 59.213 52.381 32.20 32.20 40.23 4.18
368 369 1.659098 GGTGGACGTCAAATCGATGAC 59.341 52.381 18.91 8.78 44.96 3.06
369 370 1.734377 CGGTGGACGTCAAATCGATGA 60.734 52.381 18.91 0.00 37.93 2.92
370 371 0.645355 CGGTGGACGTCAAATCGATG 59.355 55.000 18.91 0.00 37.93 3.84
371 372 0.459585 CCGGTGGACGTCAAATCGAT 60.460 55.000 20.75 0.00 42.24 3.59
372 373 1.080366 CCGGTGGACGTCAAATCGA 60.080 57.895 20.75 0.00 42.24 3.59
373 374 2.736682 GCCGGTGGACGTCAAATCG 61.737 63.158 18.91 16.24 42.24 3.34
374 375 1.669760 TGCCGGTGGACGTCAAATC 60.670 57.895 18.91 4.19 42.24 2.17
375 376 1.964373 GTGCCGGTGGACGTCAAAT 60.964 57.895 18.91 0.00 42.24 2.32
376 377 2.589442 GTGCCGGTGGACGTCAAA 60.589 61.111 18.91 1.40 42.24 2.69
377 378 4.612412 GGTGCCGGTGGACGTCAA 62.612 66.667 18.91 2.10 42.24 3.18
379 380 3.819877 AAAGGTGCCGGTGGACGTC 62.820 63.158 7.13 7.13 42.24 4.34
380 381 3.819877 GAAAGGTGCCGGTGGACGT 62.820 63.158 1.90 0.00 42.24 4.34
381 382 3.047877 GAAAGGTGCCGGTGGACG 61.048 66.667 1.90 0.00 43.80 4.79
382 383 3.047877 CGAAAGGTGCCGGTGGAC 61.048 66.667 1.90 0.00 0.00 4.02
385 386 2.141122 AAATGCGAAAGGTGCCGGTG 62.141 55.000 1.90 0.00 0.00 4.94
386 387 1.862602 GAAATGCGAAAGGTGCCGGT 61.863 55.000 1.90 0.00 0.00 5.28
387 388 1.154035 GAAATGCGAAAGGTGCCGG 60.154 57.895 0.00 0.00 0.00 6.13
388 389 1.511887 CGAAATGCGAAAGGTGCCG 60.512 57.895 0.00 0.00 44.57 5.69
389 390 1.154035 CCGAAATGCGAAAGGTGCC 60.154 57.895 0.00 0.00 44.57 5.01
390 391 1.154035 CCCGAAATGCGAAAGGTGC 60.154 57.895 0.00 0.00 44.57 5.01
391 392 1.154035 GCCCGAAATGCGAAAGGTG 60.154 57.895 0.00 0.00 44.57 4.00
392 393 1.303317 AGCCCGAAATGCGAAAGGT 60.303 52.632 0.00 0.00 44.57 3.50
393 394 1.429423 GAGCCCGAAATGCGAAAGG 59.571 57.895 0.00 0.00 44.57 3.11
394 395 1.429423 GGAGCCCGAAATGCGAAAG 59.571 57.895 0.00 0.00 44.57 2.62
395 396 3.585856 GGAGCCCGAAATGCGAAA 58.414 55.556 0.00 0.00 44.57 3.46
406 407 1.139947 CTCTTTCTCGTCGGAGCCC 59.860 63.158 0.00 0.00 40.26 5.19
407 408 1.064357 CTACTCTTTCTCGTCGGAGCC 59.936 57.143 0.00 0.00 40.26 4.70
408 409 1.064357 CCTACTCTTTCTCGTCGGAGC 59.936 57.143 0.00 0.00 40.26 4.70
409 410 1.671845 CCCTACTCTTTCTCGTCGGAG 59.328 57.143 0.00 0.00 41.89 4.63
410 411 1.747709 CCCTACTCTTTCTCGTCGGA 58.252 55.000 0.00 0.00 0.00 4.55
411 412 0.100861 GCCCTACTCTTTCTCGTCGG 59.899 60.000 0.00 0.00 0.00 4.79
412 413 0.809385 TGCCCTACTCTTTCTCGTCG 59.191 55.000 0.00 0.00 0.00 5.12
413 414 2.427453 TCATGCCCTACTCTTTCTCGTC 59.573 50.000 0.00 0.00 0.00 4.20
414 415 2.428890 CTCATGCCCTACTCTTTCTCGT 59.571 50.000 0.00 0.00 0.00 4.18
415 416 2.690497 TCTCATGCCCTACTCTTTCTCG 59.310 50.000 0.00 0.00 0.00 4.04
416 417 3.957497 TCTCTCATGCCCTACTCTTTCTC 59.043 47.826 0.00 0.00 0.00 2.87
417 418 3.987745 TCTCTCATGCCCTACTCTTTCT 58.012 45.455 0.00 0.00 0.00 2.52
418 419 4.502950 CCATCTCTCATGCCCTACTCTTTC 60.503 50.000 0.00 0.00 0.00 2.62
419 420 3.390639 CCATCTCTCATGCCCTACTCTTT 59.609 47.826 0.00 0.00 0.00 2.52
420 421 2.971330 CCATCTCTCATGCCCTACTCTT 59.029 50.000 0.00 0.00 0.00 2.85
421 422 2.607499 CCATCTCTCATGCCCTACTCT 58.393 52.381 0.00 0.00 0.00 3.24
422 423 1.001860 GCCATCTCTCATGCCCTACTC 59.998 57.143 0.00 0.00 0.00 2.59
423 424 1.055040 GCCATCTCTCATGCCCTACT 58.945 55.000 0.00 0.00 0.00 2.57
424 425 0.320247 CGCCATCTCTCATGCCCTAC 60.320 60.000 0.00 0.00 0.00 3.18
425 426 0.469892 TCGCCATCTCTCATGCCCTA 60.470 55.000 0.00 0.00 0.00 3.53
426 427 1.763655 TCGCCATCTCTCATGCCCT 60.764 57.895 0.00 0.00 0.00 5.19
427 428 1.596477 GTCGCCATCTCTCATGCCC 60.596 63.158 0.00 0.00 0.00 5.36
428 429 1.953138 CGTCGCCATCTCTCATGCC 60.953 63.158 0.00 0.00 0.00 4.40
429 430 2.593134 GCGTCGCCATCTCTCATGC 61.593 63.158 5.75 0.00 0.00 4.06
430 431 3.622756 GCGTCGCCATCTCTCATG 58.377 61.111 5.75 0.00 0.00 3.07
441 442 2.876645 CGAGACTCAAGGCGTCGC 60.877 66.667 9.22 9.22 36.53 5.19
442 443 1.797933 CACGAGACTCAAGGCGTCG 60.798 63.158 2.82 4.02 36.53 5.12
443 444 0.455295 CTCACGAGACTCAAGGCGTC 60.455 60.000 2.82 0.00 34.37 5.19
444 445 1.581954 CTCACGAGACTCAAGGCGT 59.418 57.895 2.82 0.00 37.48 5.68
445 446 1.803519 GCTCACGAGACTCAAGGCG 60.804 63.158 2.82 0.00 0.00 5.52
446 447 1.446966 GGCTCACGAGACTCAAGGC 60.447 63.158 2.82 5.41 32.39 4.35
447 448 4.900154 GGCTCACGAGACTCAAGG 57.100 61.111 2.82 0.00 32.39 3.61
460 461 4.803426 CTGGACACGAGCCGGCTC 62.803 72.222 40.89 40.89 39.55 4.70
466 467 0.530870 GAATAGGGCTGGACACGAGC 60.531 60.000 0.00 0.00 35.57 5.03
467 468 1.115467 AGAATAGGGCTGGACACGAG 58.885 55.000 0.00 0.00 0.00 4.18
468 469 2.029623 GTAGAATAGGGCTGGACACGA 58.970 52.381 0.00 0.00 0.00 4.35
469 470 1.068741 GGTAGAATAGGGCTGGACACG 59.931 57.143 0.00 0.00 0.00 4.49
470 471 2.399580 AGGTAGAATAGGGCTGGACAC 58.600 52.381 0.00 0.00 0.00 3.67
471 472 2.771943 CAAGGTAGAATAGGGCTGGACA 59.228 50.000 0.00 0.00 0.00 4.02
472 473 2.485657 GCAAGGTAGAATAGGGCTGGAC 60.486 54.545 0.00 0.00 0.00 4.02
473 474 1.768870 GCAAGGTAGAATAGGGCTGGA 59.231 52.381 0.00 0.00 0.00 3.86
474 475 1.202818 GGCAAGGTAGAATAGGGCTGG 60.203 57.143 0.00 0.00 0.00 4.85
475 476 1.541233 CGGCAAGGTAGAATAGGGCTG 60.541 57.143 0.00 0.00 0.00 4.85
476 477 0.759346 CGGCAAGGTAGAATAGGGCT 59.241 55.000 0.00 0.00 0.00 5.19
477 478 0.756903 TCGGCAAGGTAGAATAGGGC 59.243 55.000 0.00 0.00 0.00 5.19
478 479 1.269621 CGTCGGCAAGGTAGAATAGGG 60.270 57.143 0.00 0.00 0.00 3.53
479 480 1.679680 TCGTCGGCAAGGTAGAATAGG 59.320 52.381 0.00 0.00 0.00 2.57
480 481 3.566523 GATCGTCGGCAAGGTAGAATAG 58.433 50.000 0.00 0.00 0.00 1.73
481 482 2.031420 CGATCGTCGGCAAGGTAGAATA 60.031 50.000 7.03 0.00 36.00 1.75
482 483 1.269102 CGATCGTCGGCAAGGTAGAAT 60.269 52.381 7.03 0.00 36.00 2.40
483 484 0.099968 CGATCGTCGGCAAGGTAGAA 59.900 55.000 7.03 0.00 36.00 2.10
484 485 1.725665 CGATCGTCGGCAAGGTAGA 59.274 57.895 7.03 0.00 36.00 2.59
485 486 4.303853 CGATCGTCGGCAAGGTAG 57.696 61.111 7.03 0.00 36.00 3.18
494 495 1.389106 GGAGTTTTTGTCCGATCGTCG 59.611 52.381 15.09 0.00 40.07 5.12
502 503 1.145803 CGTCCTCGGAGTTTTTGTCC 58.854 55.000 4.02 0.00 0.00 4.02
503 504 0.511653 GCGTCCTCGGAGTTTTTGTC 59.488 55.000 4.02 0.00 37.56 3.18
504 505 1.219522 CGCGTCCTCGGAGTTTTTGT 61.220 55.000 0.00 0.00 37.56 2.83
505 506 1.491563 CGCGTCCTCGGAGTTTTTG 59.508 57.895 0.00 0.00 37.56 2.44
506 507 2.315386 GCGCGTCCTCGGAGTTTTT 61.315 57.895 8.43 0.00 37.56 1.94
507 508 2.737376 GCGCGTCCTCGGAGTTTT 60.737 61.111 8.43 0.00 37.56 2.43
508 509 3.916392 CTGCGCGTCCTCGGAGTTT 62.916 63.158 8.43 0.00 41.90 2.66
509 510 4.421479 CTGCGCGTCCTCGGAGTT 62.421 66.667 8.43 0.00 41.90 3.01
562 563 3.682292 ATCCAGTTTCGCTCCCCGC 62.682 63.158 0.00 0.00 36.73 6.13
563 564 1.815421 CATCCAGTTTCGCTCCCCG 60.815 63.158 0.00 0.00 38.61 5.73
564 565 0.035439 TTCATCCAGTTTCGCTCCCC 60.035 55.000 0.00 0.00 0.00 4.81
565 566 1.373570 CTTCATCCAGTTTCGCTCCC 58.626 55.000 0.00 0.00 0.00 4.30
566 567 0.729690 GCTTCATCCAGTTTCGCTCC 59.270 55.000 0.00 0.00 0.00 4.70
567 568 1.663135 GAGCTTCATCCAGTTTCGCTC 59.337 52.381 0.00 0.00 36.12 5.03
568 569 1.677217 GGAGCTTCATCCAGTTTCGCT 60.677 52.381 0.00 0.00 39.34 4.93
569 570 0.729690 GGAGCTTCATCCAGTTTCGC 59.270 55.000 0.00 0.00 39.34 4.70
570 571 1.002366 CGGAGCTTCATCCAGTTTCG 58.998 55.000 0.00 0.00 39.53 3.46
585 586 1.391485 CACAACAATCTTCGAGCGGAG 59.609 52.381 0.00 0.00 0.00 4.63
586 587 1.270094 ACACAACAATCTTCGAGCGGA 60.270 47.619 0.00 0.00 0.00 5.54
587 588 1.148310 ACACAACAATCTTCGAGCGG 58.852 50.000 0.00 0.00 0.00 5.52
588 589 2.563976 CAACACAACAATCTTCGAGCG 58.436 47.619 0.00 0.00 0.00 5.03
589 590 2.286950 TGCAACACAACAATCTTCGAGC 60.287 45.455 0.00 0.00 0.00 5.03
590 591 3.607422 TGCAACACAACAATCTTCGAG 57.393 42.857 0.00 0.00 0.00 4.04
591 592 3.563390 TGATGCAACACAACAATCTTCGA 59.437 39.130 0.00 0.00 0.00 3.71
592 593 3.887741 TGATGCAACACAACAATCTTCG 58.112 40.909 0.00 0.00 0.00 3.79
593 594 6.774354 ATTTGATGCAACACAACAATCTTC 57.226 33.333 0.00 0.00 40.32 2.87
594 595 8.836268 ATTATTTGATGCAACACAACAATCTT 57.164 26.923 0.00 0.00 40.32 2.40
597 598 9.656040 ACATATTATTTGATGCAACACAACAAT 57.344 25.926 0.00 0.00 40.32 2.71
598 599 9.486497 AACATATTATTTGATGCAACACAACAA 57.514 25.926 0.00 0.00 39.08 2.83
599 600 9.486497 AAACATATTATTTGATGCAACACAACA 57.514 25.926 0.00 0.00 0.00 3.33
637 638 8.299570 GCATTTCACATCCGGATATCTTAAATT 58.700 33.333 18.63 0.52 0.00 1.82
638 639 7.448161 TGCATTTCACATCCGGATATCTTAAAT 59.552 33.333 18.63 14.81 0.00 1.40
639 640 6.770303 TGCATTTCACATCCGGATATCTTAAA 59.230 34.615 18.63 13.27 0.00 1.52
640 641 6.295249 TGCATTTCACATCCGGATATCTTAA 58.705 36.000 18.63 8.50 0.00 1.85
641 642 5.863965 TGCATTTCACATCCGGATATCTTA 58.136 37.500 18.63 3.32 0.00 2.10
642 643 4.717877 TGCATTTCACATCCGGATATCTT 58.282 39.130 18.63 0.00 0.00 2.40
643 644 4.356405 TGCATTTCACATCCGGATATCT 57.644 40.909 18.63 0.00 0.00 1.98
644 645 5.633830 AATGCATTTCACATCCGGATATC 57.366 39.130 18.63 0.00 0.00 1.63
645 646 6.409524 AAAATGCATTTCACATCCGGATAT 57.590 33.333 24.28 1.59 0.00 1.63
646 647 5.850557 AAAATGCATTTCACATCCGGATA 57.149 34.783 24.28 0.42 0.00 2.59
647 648 4.741321 AAAATGCATTTCACATCCGGAT 57.259 36.364 24.28 12.38 0.00 4.18
648 649 4.533919 AAAAATGCATTTCACATCCGGA 57.466 36.364 24.28 6.61 0.00 5.14
666 667 3.248125 AGCGACCGATCACGTTTTAAAAA 59.752 39.130 1.31 0.00 37.88 1.94
667 668 2.801679 AGCGACCGATCACGTTTTAAAA 59.198 40.909 0.00 0.00 37.88 1.52
668 669 2.156117 CAGCGACCGATCACGTTTTAAA 59.844 45.455 0.00 0.00 37.88 1.52
669 670 1.722464 CAGCGACCGATCACGTTTTAA 59.278 47.619 0.00 0.00 37.88 1.52
670 671 1.336148 ACAGCGACCGATCACGTTTTA 60.336 47.619 0.00 0.00 37.88 1.52
671 672 0.599204 ACAGCGACCGATCACGTTTT 60.599 50.000 0.00 0.00 37.88 2.43
672 673 1.006571 ACAGCGACCGATCACGTTT 60.007 52.632 0.00 0.00 37.88 3.60
673 674 1.443872 GACAGCGACCGATCACGTT 60.444 57.895 0.00 0.00 37.88 3.99
674 675 2.178521 GACAGCGACCGATCACGT 59.821 61.111 0.00 0.00 37.88 4.49
675 676 1.869574 CAGACAGCGACCGATCACG 60.870 63.158 0.00 0.00 39.43 4.35
676 677 1.073216 CACAGACAGCGACCGATCAC 61.073 60.000 0.00 0.00 0.00 3.06
677 678 1.212751 CACAGACAGCGACCGATCA 59.787 57.895 0.00 0.00 0.00 2.92
678 679 1.517257 CCACAGACAGCGACCGATC 60.517 63.158 0.00 0.00 0.00 3.69
679 680 1.532604 TTCCACAGACAGCGACCGAT 61.533 55.000 0.00 0.00 0.00 4.18
680 681 2.142357 CTTCCACAGACAGCGACCGA 62.142 60.000 0.00 0.00 0.00 4.69
681 682 1.734477 CTTCCACAGACAGCGACCG 60.734 63.158 0.00 0.00 0.00 4.79
682 683 2.029844 GCTTCCACAGACAGCGACC 61.030 63.158 0.00 0.00 0.00 4.79
683 684 3.555428 GCTTCCACAGACAGCGAC 58.445 61.111 0.00 0.00 0.00 5.19
686 687 2.029844 GGACGCTTCCACAGACAGC 61.030 63.158 3.96 0.00 42.30 4.40
687 688 4.268687 GGACGCTTCCACAGACAG 57.731 61.111 3.96 0.00 42.30 3.51
695 696 2.450609 TTACTTGTCTGGACGCTTCC 57.549 50.000 1.37 1.37 43.19 3.46
696 697 4.378459 CCAATTTACTTGTCTGGACGCTTC 60.378 45.833 0.00 0.00 32.61 3.86
697 698 3.502211 CCAATTTACTTGTCTGGACGCTT 59.498 43.478 0.00 0.00 32.61 4.68
698 699 3.074412 CCAATTTACTTGTCTGGACGCT 58.926 45.455 0.00 0.00 32.61 5.07
699 700 2.414161 GCCAATTTACTTGTCTGGACGC 60.414 50.000 0.00 0.00 32.61 5.19
700 701 3.074412 AGCCAATTTACTTGTCTGGACG 58.926 45.455 0.00 0.00 32.61 4.79
701 702 5.001232 TGTAGCCAATTTACTTGTCTGGAC 58.999 41.667 0.00 0.00 32.61 4.02
702 703 5.221843 ACTGTAGCCAATTTACTTGTCTGGA 60.222 40.000 0.00 0.00 32.61 3.86
703 704 5.003804 ACTGTAGCCAATTTACTTGTCTGG 58.996 41.667 0.00 0.00 32.61 3.86
704 705 5.934625 AGACTGTAGCCAATTTACTTGTCTG 59.065 40.000 10.96 0.00 35.91 3.51
705 706 6.115448 AGACTGTAGCCAATTTACTTGTCT 57.885 37.500 0.00 0.00 34.28 3.41
706 707 6.034683 CGTAGACTGTAGCCAATTTACTTGTC 59.965 42.308 0.00 0.00 32.61 3.18
707 708 5.867716 CGTAGACTGTAGCCAATTTACTTGT 59.132 40.000 0.00 0.00 32.61 3.16
708 709 6.097356 TCGTAGACTGTAGCCAATTTACTTG 58.903 40.000 0.00 0.00 34.42 3.16
709 710 6.152323 TCTCGTAGACTGTAGCCAATTTACTT 59.848 38.462 0.00 0.00 0.00 2.24
734 735 2.105821 TCCAAACCACCGAATGTCTCTT 59.894 45.455 0.00 0.00 0.00 2.85
794 795 0.320421 TAGCCCAGACTGTTCGTTGC 60.320 55.000 0.93 0.00 0.00 4.17
847 865 0.396556 AAAACTGAAACCGGCCCACT 60.397 50.000 0.00 0.00 0.00 4.00
871 892 3.192422 CGATATACTCTTCTCCTGGCTGG 59.808 52.174 3.65 3.65 37.10 4.85
895 916 7.015195 TCCTTTCTTTTCCGAATTCCAAATTCT 59.985 33.333 9.90 0.00 0.00 2.40
898 919 6.493458 TCTCCTTTCTTTTCCGAATTCCAAAT 59.507 34.615 0.00 0.00 0.00 2.32
942 985 2.180276 GCCACTACTTTCTCTCCCAGA 58.820 52.381 0.00 0.00 0.00 3.86
943 986 1.208293 GGCCACTACTTTCTCTCCCAG 59.792 57.143 0.00 0.00 0.00 4.45
944 987 1.203313 AGGCCACTACTTTCTCTCCCA 60.203 52.381 5.01 0.00 0.00 4.37
1152 1198 3.600388 GCGATCTGGATATACCCCAAAG 58.400 50.000 0.00 0.00 38.00 2.77
1185 1232 1.402968 CCCAATCAATCTGGCGTCAAG 59.597 52.381 0.00 0.00 32.10 3.02
1188 1235 1.729881 GCCCAATCAATCTGGCGTC 59.270 57.895 0.00 0.00 33.59 5.19
1216 1263 3.813166 CGTGGTCAATTCCTAAACACAGT 59.187 43.478 0.00 0.00 0.00 3.55
1218 1265 3.142951 CCGTGGTCAATTCCTAAACACA 58.857 45.455 0.00 0.00 0.00 3.72
1237 1284 1.803334 TCCACCGAAACTGAATTCCG 58.197 50.000 2.27 0.00 0.00 4.30
1238 1285 4.783764 AAATCCACCGAAACTGAATTCC 57.216 40.909 2.27 0.00 0.00 3.01
1253 1300 2.164624 CGCATAAACCGGGAAAAATCCA 59.835 45.455 6.32 0.00 0.00 3.41
1298 1345 4.018506 TGGCACCAGAGATTCTAAATCCAA 60.019 41.667 0.00 0.00 0.00 3.53
1300 1347 4.133078 CTGGCACCAGAGATTCTAAATCC 58.867 47.826 11.43 0.00 46.30 3.01
1311 1358 0.687354 ACTTGTACCTGGCACCAGAG 59.313 55.000 18.44 9.26 46.30 3.35
1329 1376 2.450476 AGGAAACCTGCAATCCATGAC 58.550 47.619 0.00 0.00 35.62 3.06
1371 1425 2.879002 ATTCTCATGACGCGTGATCT 57.121 45.000 20.70 0.00 0.00 2.75
1381 1435 9.745018 ACTCTCCAAATTAAGAAATTCTCATGA 57.255 29.630 0.00 0.00 34.12 3.07
1386 1440 8.579863 CCAACACTCTCCAAATTAAGAAATTCT 58.420 33.333 0.00 0.00 34.12 2.40
1394 1448 4.215399 CGCTTCCAACACTCTCCAAATTAA 59.785 41.667 0.00 0.00 0.00 1.40
1401 1455 0.390472 CTCCGCTTCCAACACTCTCC 60.390 60.000 0.00 0.00 0.00 3.71
1402 1456 0.603569 TCTCCGCTTCCAACACTCTC 59.396 55.000 0.00 0.00 0.00 3.20
1457 1514 2.355716 CGTCCTATCAGGCAGGGAAAAA 60.356 50.000 0.00 0.00 34.61 1.94
1480 1537 4.152647 TGGCCATGTACCAACACAAATTA 58.847 39.130 0.00 0.00 38.78 1.40
1534 1591 3.659183 ATTCCCTGAAAGACCCATCAG 57.341 47.619 0.00 0.00 42.15 2.90
1541 1598 4.579869 TGCAAGTCTATTCCCTGAAAGAC 58.420 43.478 0.00 0.00 38.90 3.01
1548 1605 5.185828 GGTGAATTTTGCAAGTCTATTCCCT 59.814 40.000 16.32 0.00 0.00 4.20
1555 1612 5.509670 GGCTTAAGGTGAATTTTGCAAGTCT 60.510 40.000 4.29 0.00 0.00 3.24
1557 1614 4.100808 TGGCTTAAGGTGAATTTTGCAAGT 59.899 37.500 4.29 0.00 0.00 3.16
1558 1615 4.630111 TGGCTTAAGGTGAATTTTGCAAG 58.370 39.130 4.29 0.00 0.00 4.01
1560 1617 4.527816 AGATGGCTTAAGGTGAATTTTGCA 59.472 37.500 4.29 0.00 0.00 4.08
1562 1619 6.271488 TGAGATGGCTTAAGGTGAATTTTG 57.729 37.500 4.29 0.00 0.00 2.44
1577 1688 3.557228 AGAAGGTTCTCATGAGATGGC 57.443 47.619 25.64 17.51 37.29 4.40
1755 1880 4.892934 ACCCAAAGAGTTGCTCATAAAACA 59.107 37.500 0.00 0.00 33.01 2.83
1791 1916 5.273944 TCGAAGACGACATTGTGATAGATG 58.726 41.667 0.00 0.00 43.81 2.90
1881 2006 4.704965 AGGAGTCCGTAAGCAATTAATCC 58.295 43.478 2.76 0.00 0.00 3.01
1884 2009 3.687698 GCAAGGAGTCCGTAAGCAATTAA 59.312 43.478 2.76 0.00 0.00 1.40
1885 2010 3.267483 GCAAGGAGTCCGTAAGCAATTA 58.733 45.455 2.76 0.00 0.00 1.40
1886 2011 2.084546 GCAAGGAGTCCGTAAGCAATT 58.915 47.619 2.76 0.00 0.00 2.32
1887 2012 1.739067 GCAAGGAGTCCGTAAGCAAT 58.261 50.000 2.76 0.00 0.00 3.56
1888 2013 0.669318 CGCAAGGAGTCCGTAAGCAA 60.669 55.000 2.76 0.00 0.00 3.91
1910 2040 7.136822 ACTGGCATCAACTAATAAGGTATGA 57.863 36.000 0.00 0.00 0.00 2.15
1911 2041 7.498900 TCAACTGGCATCAACTAATAAGGTATG 59.501 37.037 0.00 0.00 0.00 2.39
1912 2042 7.573710 TCAACTGGCATCAACTAATAAGGTAT 58.426 34.615 0.00 0.00 0.00 2.73
1961 2097 5.799936 ACATTTACGCAGATTTGTATGCAAC 59.200 36.000 0.00 0.00 42.68 4.17
2103 2239 4.062293 CGTTGAATTTGTGGAGTAGGTCA 58.938 43.478 0.00 0.00 0.00 4.02
2138 2274 5.479724 TCATATACTGGCTGGATCTCAGAAG 59.520 44.000 13.48 11.64 46.18 2.85
2267 2406 3.470888 CCCTCGGAGGCACGGATT 61.471 66.667 18.91 0.00 32.73 3.01
2271 2458 3.461773 ATGTCCCTCGGAGGCACG 61.462 66.667 18.91 5.50 32.73 5.34
2292 2503 2.105128 GCGGATCTGGGTCTCGTG 59.895 66.667 3.14 0.00 0.00 4.35
2338 2549 5.087323 AGTTTCCAGAGACCAAGATGAGTA 58.913 41.667 0.00 0.00 0.00 2.59
2403 2614 1.906253 CTCTGTGGCTGAGATGGCT 59.094 57.895 0.00 0.00 32.36 4.75
2571 2782 1.918262 TCCCTGTTCTCCATCAGCAAT 59.082 47.619 0.00 0.00 0.00 3.56
2951 3163 4.561752 AGATAGTAGGCCTGGATGAACTT 58.438 43.478 17.99 0.64 0.00 2.66
3005 3248 9.915629 TTCAATATGCAAGTAAATAAAAACGGT 57.084 25.926 0.00 0.00 0.00 4.83
3191 3439 4.468095 TTAGCTTTCGTCAAAGTCAAGC 57.532 40.909 0.00 0.00 41.18 4.01
3192 3440 6.234213 CGTATTAGCTTTCGTCAAAGTCAAG 58.766 40.000 0.00 0.00 41.18 3.02
3204 3452 4.835199 TTCAGTTCGCGTATTAGCTTTC 57.165 40.909 5.77 0.00 34.40 2.62
3208 3456 7.111593 CCATTTTTATTCAGTTCGCGTATTAGC 59.888 37.037 5.77 0.00 0.00 3.09
3219 3467 9.014297 CAGTACTTCCTCCATTTTTATTCAGTT 57.986 33.333 0.00 0.00 0.00 3.16
3223 3471 9.232473 AGAACAGTACTTCCTCCATTTTTATTC 57.768 33.333 0.00 0.00 0.00 1.75
3229 3477 5.308825 CACAGAACAGTACTTCCTCCATTT 58.691 41.667 0.00 0.00 0.00 2.32
3238 3486 9.031360 CATATAAATACGCACAGAACAGTACTT 57.969 33.333 0.00 0.00 0.00 2.24
3243 3491 6.530913 AGCATATAAATACGCACAGAACAG 57.469 37.500 0.00 0.00 0.00 3.16
3276 3524 4.405358 CCCCCATACAGCAACAAATACAAT 59.595 41.667 0.00 0.00 0.00 2.71
3405 3653 7.545362 AAATTCAGAGGATGTTACAAGATCG 57.455 36.000 0.00 0.00 30.00 3.69
3418 3666 8.924511 ACAGAAGTAAATCAAAATTCAGAGGA 57.075 30.769 0.00 0.00 0.00 3.71
3439 3687 4.906065 ACACACGAAACAGTAGTACAGA 57.094 40.909 2.52 0.00 0.00 3.41
3441 3689 9.940166 CATATATACACACGAAACAGTAGTACA 57.060 33.333 2.52 0.00 0.00 2.90
3459 3707 8.883731 CCCAGCAAACTGTATAAGCATATATAC 58.116 37.037 7.16 7.16 42.81 1.47
3462 3710 6.934645 GTCCCAGCAAACTGTATAAGCATATA 59.065 38.462 0.00 0.00 42.81 0.86
3463 3711 5.765182 GTCCCAGCAAACTGTATAAGCATAT 59.235 40.000 0.00 0.00 42.81 1.78
3464 3712 5.123227 GTCCCAGCAAACTGTATAAGCATA 58.877 41.667 0.00 0.00 42.81 3.14
3465 3713 3.947834 GTCCCAGCAAACTGTATAAGCAT 59.052 43.478 0.00 0.00 42.81 3.79
3466 3714 3.343617 GTCCCAGCAAACTGTATAAGCA 58.656 45.455 0.00 0.00 42.81 3.91
3467 3715 2.683362 GGTCCCAGCAAACTGTATAAGC 59.317 50.000 0.00 0.00 42.81 3.09
3468 3716 2.936498 CGGTCCCAGCAAACTGTATAAG 59.064 50.000 0.00 0.00 42.81 1.73
3469 3717 2.568062 TCGGTCCCAGCAAACTGTATAA 59.432 45.455 0.00 0.00 42.81 0.98
3470 3718 2.167693 CTCGGTCCCAGCAAACTGTATA 59.832 50.000 0.00 0.00 42.81 1.47
3479 3727 1.701031 TTTGGAACTCGGTCCCAGCA 61.701 55.000 0.00 0.00 36.80 4.41
3480 3728 0.536460 TTTTGGAACTCGGTCCCAGC 60.536 55.000 0.00 0.00 36.80 4.85
3543 3791 1.072331 AGCCCCAGTGAACTGTACAAG 59.928 52.381 9.49 0.00 42.27 3.16
3544 3792 1.136828 AGCCCCAGTGAACTGTACAA 58.863 50.000 9.49 0.00 42.27 2.41
3551 3799 0.954452 CAAACTCAGCCCCAGTGAAC 59.046 55.000 0.00 0.00 0.00 3.18
3552 3800 0.843309 TCAAACTCAGCCCCAGTGAA 59.157 50.000 0.00 0.00 0.00 3.18
3553 3801 0.843309 TTCAAACTCAGCCCCAGTGA 59.157 50.000 0.00 0.00 0.00 3.41
3554 3802 1.242076 CTTCAAACTCAGCCCCAGTG 58.758 55.000 0.00 0.00 0.00 3.66
3555 3803 0.538287 GCTTCAAACTCAGCCCCAGT 60.538 55.000 0.00 0.00 0.00 4.00
3558 3806 1.246737 CCTGCTTCAAACTCAGCCCC 61.247 60.000 0.00 0.00 34.91 5.80
3560 3808 0.877743 GACCTGCTTCAAACTCAGCC 59.122 55.000 0.00 0.00 34.91 4.85
3561 3809 1.889545 AGACCTGCTTCAAACTCAGC 58.110 50.000 0.00 0.00 36.49 4.26
3563 3811 4.833380 AGTAGTAGACCTGCTTCAAACTCA 59.167 41.667 0.00 0.00 31.23 3.41
3564 3812 5.394224 AGTAGTAGACCTGCTTCAAACTC 57.606 43.478 0.00 0.00 31.23 3.01
3565 3813 5.810080 AAGTAGTAGACCTGCTTCAAACT 57.190 39.130 0.00 0.00 41.68 2.66
3566 3814 6.482308 TGAAAAGTAGTAGACCTGCTTCAAAC 59.518 38.462 0.00 0.00 44.27 2.93
3567 3815 6.588204 TGAAAAGTAGTAGACCTGCTTCAAA 58.412 36.000 0.00 0.00 44.27 2.69
3569 3817 5.801531 TGAAAAGTAGTAGACCTGCTTCA 57.198 39.130 0.00 0.00 44.27 3.02
3570 3818 7.674471 AAATGAAAAGTAGTAGACCTGCTTC 57.326 36.000 0.00 0.00 44.27 3.86
3572 3820 7.719633 TCAAAAATGAAAAGTAGTAGACCTGCT 59.280 33.333 0.00 0.00 37.79 4.24
3573 3821 7.871853 TCAAAAATGAAAAGTAGTAGACCTGC 58.128 34.615 0.00 0.00 0.00 4.85
3575 3823 8.568794 GCTTCAAAAATGAAAAGTAGTAGACCT 58.431 33.333 0.00 0.00 0.00 3.85
3577 3825 9.387123 CTGCTTCAAAAATGAAAAGTAGTAGAC 57.613 33.333 0.00 0.00 29.98 2.59
3578 3826 8.567948 CCTGCTTCAAAAATGAAAAGTAGTAGA 58.432 33.333 0.00 0.00 31.85 2.59
3579 3827 8.352942 ACCTGCTTCAAAAATGAAAAGTAGTAG 58.647 33.333 0.00 0.00 31.85 2.57
3580 3828 8.232913 ACCTGCTTCAAAAATGAAAAGTAGTA 57.767 30.769 0.00 0.00 31.85 1.82
3581 3829 7.068716 AGACCTGCTTCAAAAATGAAAAGTAGT 59.931 33.333 0.00 0.00 31.85 2.73
3582 3830 7.428826 AGACCTGCTTCAAAAATGAAAAGTAG 58.571 34.615 0.00 0.00 33.06 2.57
3585 3833 7.428826 AGTAGACCTGCTTCAAAAATGAAAAG 58.571 34.615 0.00 0.00 0.00 2.27
3586 3834 7.346751 AGTAGACCTGCTTCAAAAATGAAAA 57.653 32.000 0.00 0.00 0.00 2.29
3589 3837 6.769512 AGTAGTAGACCTGCTTCAAAAATGA 58.230 36.000 0.00 0.00 31.23 2.57
3590 3838 6.876257 AGAGTAGTAGACCTGCTTCAAAAATG 59.124 38.462 0.00 0.00 36.11 2.32
3597 4004 5.785243 ACAAAAGAGTAGTAGACCTGCTTC 58.215 41.667 0.00 0.00 36.11 3.86
3603 4010 7.797038 TTTTTGGACAAAAGAGTAGTAGACC 57.203 36.000 9.80 0.00 40.83 3.85
3625 4032 9.667107 CGGTAGTGATCCCATTATGTATTATTT 57.333 33.333 0.00 0.00 0.00 1.40
3627 4034 8.375493 ACGGTAGTGATCCCATTATGTATTAT 57.625 34.615 0.00 0.00 0.00 1.28
3633 4040 5.723672 ACTACGGTAGTGATCCCATTATG 57.276 43.478 19.47 0.00 37.69 1.90
3634 4041 5.011738 CCAACTACGGTAGTGATCCCATTAT 59.988 44.000 20.72 0.00 39.39 1.28
3635 4042 4.342951 CCAACTACGGTAGTGATCCCATTA 59.657 45.833 20.72 0.00 39.39 1.90
3637 4044 2.698797 CCAACTACGGTAGTGATCCCAT 59.301 50.000 20.72 1.25 39.39 4.00
3638 4045 2.104967 CCAACTACGGTAGTGATCCCA 58.895 52.381 20.72 0.00 39.39 4.37
3639 4046 2.361438 CTCCAACTACGGTAGTGATCCC 59.639 54.545 20.72 0.00 39.39 3.85
3640 4047 3.022406 ACTCCAACTACGGTAGTGATCC 58.978 50.000 20.72 0.00 39.39 3.36
3641 4048 6.388435 AATACTCCAACTACGGTAGTGATC 57.612 41.667 20.72 0.00 39.39 2.92
3644 4051 4.095483 ACGAATACTCCAACTACGGTAGTG 59.905 45.833 20.72 14.13 39.39 2.74
3646 4053 4.889832 ACGAATACTCCAACTACGGTAG 57.110 45.455 13.49 13.49 0.00 3.18
3647 4054 4.675146 GCAACGAATACTCCAACTACGGTA 60.675 45.833 0.00 0.00 0.00 4.02
3677 4086 1.414158 TCAGAGATCAATCGACCCCC 58.586 55.000 0.00 0.00 0.00 5.40
3678 4087 2.432510 ACTTCAGAGATCAATCGACCCC 59.567 50.000 0.00 0.00 0.00 4.95
3693 4102 0.393077 AGACCACGGTGGAACTTCAG 59.607 55.000 32.72 4.71 40.96 3.02
3694 4103 0.105964 CAGACCACGGTGGAACTTCA 59.894 55.000 32.72 0.00 40.96 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.