Multiple sequence alignment - TraesCS3B01G406900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G406900 chr3B 100.000 3104 0 0 1 3104 642312324 642309221 0.000000e+00 5733.0
1 TraesCS3B01G406900 chr3B 92.517 1029 69 2 1598 2625 642391296 642390275 0.000000e+00 1467.0
2 TraesCS3B01G406900 chr3B 89.696 427 34 6 925 1341 642406164 642405738 1.470000e-148 536.0
3 TraesCS3B01G406900 chr3B 90.741 270 25 0 1333 1602 642403699 642403430 9.510000e-96 361.0
4 TraesCS3B01G406900 chr3B 88.333 300 26 4 2627 2919 796838328 796838031 5.720000e-93 351.0
5 TraesCS3B01G406900 chr3B 86.792 318 25 7 925 1226 642460456 642460140 4.450000e-89 339.0
6 TraesCS3B01G406900 chr3B 100.000 162 0 0 3441 3602 642308884 642308723 2.100000e-77 300.0
7 TraesCS3B01G406900 chr3B 88.750 160 8 1 2955 3104 796837868 796837709 1.710000e-43 187.0
8 TraesCS3B01G406900 chr3B 92.982 57 4 0 3546 3602 332769885 332769941 2.300000e-12 84.2
9 TraesCS3B01G406900 chr3D 93.179 2155 106 14 500 2625 481292565 481290423 0.000000e+00 3127.0
10 TraesCS3B01G406900 chr3D 92.861 1709 114 5 925 2625 481393570 481391862 0.000000e+00 2473.0
11 TraesCS3B01G406900 chr3D 87.629 291 35 1 2630 2919 554762647 554762357 1.600000e-88 337.0
12 TraesCS3B01G406900 chr3D 96.078 51 2 0 3552 3602 38859401 38859451 2.300000e-12 84.2
13 TraesCS3B01G406900 chr3A 94.468 1663 84 6 969 2625 624058722 624057062 0.000000e+00 2555.0
14 TraesCS3B01G406900 chr3A 92.786 1705 115 5 925 2621 624186351 624184647 0.000000e+00 2460.0
15 TraesCS3B01G406900 chr3A 94.237 295 7 6 637 922 624059097 624058804 3.300000e-120 442.0
16 TraesCS3B01G406900 chr3A 80.435 184 25 7 206 384 624059278 624059101 2.920000e-26 130.0
17 TraesCS3B01G406900 chr3A 93.023 43 2 1 15 57 743830485 743830444 1.080000e-05 62.1
18 TraesCS3B01G406900 chr3A 89.362 47 4 1 13 59 97156917 97156962 1.400000e-04 58.4
19 TraesCS3B01G406900 chr1B 90.329 486 45 2 2620 3104 575637585 575638069 1.410000e-178 636.0
20 TraesCS3B01G406900 chr1B 91.489 47 4 0 13 59 661148500 661148454 8.350000e-07 65.8
21 TraesCS3B01G406900 chr1B 93.182 44 2 1 19 62 66926440 66926398 3.000000e-06 63.9
22 TraesCS3B01G406900 chr4B 88.737 293 32 1 2627 2919 233335421 233335130 1.230000e-94 357.0
23 TraesCS3B01G406900 chr1D 84.047 257 38 3 2621 2875 391162282 391162537 9.990000e-61 244.0
24 TraesCS3B01G406900 chr5B 81.452 124 22 1 2616 2739 562121456 562121334 2.290000e-17 100.0
25 TraesCS3B01G406900 chr5B 91.525 59 4 1 3544 3602 9483096 9483039 2.980000e-11 80.5
26 TraesCS3B01G406900 chr5B 91.489 47 3 1 15 61 42695159 42695204 3.000000e-06 63.9
27 TraesCS3B01G406900 chr7B 76.190 189 42 3 2627 2814 720220813 720220627 2.960000e-16 97.1
28 TraesCS3B01G406900 chr7A 93.103 58 2 2 3545 3602 312459436 312459491 2.300000e-12 84.2
29 TraesCS3B01G406900 chr7A 94.737 38 1 1 20 56 110078367 110078404 1.400000e-04 58.4
30 TraesCS3B01G406900 chr6B 97.917 48 1 0 3555 3602 693488840 693488793 2.300000e-12 84.2
31 TraesCS3B01G406900 chr1A 96.078 51 2 0 3552 3602 477926514 477926564 2.300000e-12 84.2
32 TraesCS3B01G406900 chr1A 90.323 62 5 1 3542 3602 504066855 504066916 2.980000e-11 80.5
33 TraesCS3B01G406900 chr1A 91.111 45 3 1 15 59 308355576 308355619 3.880000e-05 60.2
34 TraesCS3B01G406900 chr5A 92.857 56 4 0 3547 3602 210885448 210885393 8.290000e-12 82.4
35 TraesCS3B01G406900 chr5A 94.340 53 3 0 3550 3602 677185153 677185101 8.290000e-12 82.4
36 TraesCS3B01G406900 chr6A 93.182 44 2 1 16 58 97610031 97609988 3.000000e-06 63.9
37 TraesCS3B01G406900 chr4A 91.111 45 3 1 15 59 658636083 658636040 3.880000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G406900 chr3B 642308723 642312324 3601 True 3016.500000 5733 100.000000 1 3602 2 chr3B.!!$R3 3601
1 TraesCS3B01G406900 chr3B 642390275 642391296 1021 True 1467.000000 1467 92.517000 1598 2625 1 chr3B.!!$R1 1027
2 TraesCS3B01G406900 chr3B 642403430 642406164 2734 True 448.500000 536 90.218500 925 1602 2 chr3B.!!$R4 677
3 TraesCS3B01G406900 chr3B 796837709 796838328 619 True 269.000000 351 88.541500 2627 3104 2 chr3B.!!$R5 477
4 TraesCS3B01G406900 chr3D 481290423 481292565 2142 True 3127.000000 3127 93.179000 500 2625 1 chr3D.!!$R1 2125
5 TraesCS3B01G406900 chr3D 481391862 481393570 1708 True 2473.000000 2473 92.861000 925 2625 1 chr3D.!!$R2 1700
6 TraesCS3B01G406900 chr3A 624184647 624186351 1704 True 2460.000000 2460 92.786000 925 2621 1 chr3A.!!$R1 1696
7 TraesCS3B01G406900 chr3A 624057062 624059278 2216 True 1042.333333 2555 89.713333 206 2625 3 chr3A.!!$R3 2419

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.035458 AAGAGGTCGGGACTTTGCAG 59.965 55.0 0.00 0.0 0.00 4.41 F
482 488 0.037734 TGGTGTCTCAGACCTAGCGA 59.962 55.0 1.24 0.0 34.26 4.93 F
483 489 0.452585 GGTGTCTCAGACCTAGCGAC 59.547 60.0 1.24 0.0 0.00 5.19 F
1063 1162 0.460987 GTCACTTCATCGGAGCCCAG 60.461 60.0 0.00 0.0 0.00 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1640 3789 0.740868 CACGTCATCGCCCATTGAGT 60.741 55.000 0.00 0.00 41.18 3.41 R
1653 3802 1.080093 GATCGCCCAGAACACGTCA 60.080 57.895 0.00 0.00 0.00 4.35 R
2482 4631 0.809385 TTCTCTCCGAAGTACGCCTG 59.191 55.000 0.00 0.00 41.07 4.85 R
2946 5103 0.179029 CTTCGGTGGGGAACAGTGTT 60.179 55.000 8.61 8.61 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 7.925993 TGTTAGCCATAATTATTTGTCTTCCG 58.074 34.615 0.00 0.00 0.00 4.30
30 31 7.012894 TGTTAGCCATAATTATTTGTCTTCCGG 59.987 37.037 0.00 0.00 0.00 5.14
31 32 5.445964 AGCCATAATTATTTGTCTTCCGGT 58.554 37.500 0.00 0.00 0.00 5.28
32 33 5.299279 AGCCATAATTATTTGTCTTCCGGTG 59.701 40.000 0.00 0.00 0.00 4.94
33 34 5.519722 CCATAATTATTTGTCTTCCGGTGC 58.480 41.667 0.00 0.00 0.00 5.01
34 35 5.067153 CCATAATTATTTGTCTTCCGGTGCA 59.933 40.000 0.00 0.00 0.00 4.57
35 36 6.405286 CCATAATTATTTGTCTTCCGGTGCAA 60.405 38.462 0.00 0.00 0.00 4.08
36 37 3.907894 TTATTTGTCTTCCGGTGCAAC 57.092 42.857 0.00 0.00 0.00 4.17
37 38 0.591170 ATTTGTCTTCCGGTGCAACG 59.409 50.000 19.45 19.45 38.12 4.10
38 39 2.054140 TTTGTCTTCCGGTGCAACGC 62.054 55.000 21.21 4.99 38.12 4.84
39 40 2.970324 GTCTTCCGGTGCAACGCA 60.970 61.111 21.21 0.00 38.12 5.24
50 51 3.601685 CAACGCACGGGCCCTTTT 61.602 61.111 22.43 0.00 36.38 2.27
51 52 3.601685 AACGCACGGGCCCTTTTG 61.602 61.111 22.43 15.24 36.38 2.44
54 55 2.675075 GCACGGGCCCTTTTGCTA 60.675 61.111 25.28 0.00 32.00 3.49
55 56 2.700773 GCACGGGCCCTTTTGCTAG 61.701 63.158 25.28 9.64 32.00 3.42
56 57 1.303317 CACGGGCCCTTTTGCTAGT 60.303 57.895 22.43 4.23 0.00 2.57
57 58 0.035820 CACGGGCCCTTTTGCTAGTA 60.036 55.000 22.43 0.00 0.00 1.82
58 59 0.252197 ACGGGCCCTTTTGCTAGTAG 59.748 55.000 22.43 1.14 0.00 2.57
59 60 1.095807 CGGGCCCTTTTGCTAGTAGC 61.096 60.000 22.43 15.56 42.82 3.58
84 85 8.807667 CATTTAAGGATGCAATTATCTTGTCC 57.192 34.615 0.00 0.00 0.00 4.02
85 86 7.953005 TTTAAGGATGCAATTATCTTGTCCA 57.047 32.000 0.00 0.00 0.00 4.02
86 87 7.572523 TTAAGGATGCAATTATCTTGTCCAG 57.427 36.000 0.00 0.00 0.00 3.86
87 88 3.887716 AGGATGCAATTATCTTGTCCAGC 59.112 43.478 0.00 0.00 0.00 4.85
88 89 3.633525 GGATGCAATTATCTTGTCCAGCA 59.366 43.478 0.00 0.00 35.03 4.41
89 90 4.498682 GGATGCAATTATCTTGTCCAGCAC 60.499 45.833 0.00 0.00 33.18 4.40
90 91 3.689347 TGCAATTATCTTGTCCAGCACT 58.311 40.909 0.00 0.00 0.00 4.40
91 92 4.081406 TGCAATTATCTTGTCCAGCACTT 58.919 39.130 0.00 0.00 0.00 3.16
92 93 4.156556 TGCAATTATCTTGTCCAGCACTTC 59.843 41.667 0.00 0.00 0.00 3.01
93 94 4.439289 GCAATTATCTTGTCCAGCACTTCC 60.439 45.833 0.00 0.00 0.00 3.46
94 95 2.672961 TATCTTGTCCAGCACTTCCG 57.327 50.000 0.00 0.00 0.00 4.30
95 96 0.674895 ATCTTGTCCAGCACTTCCGC 60.675 55.000 0.00 0.00 0.00 5.54
96 97 2.664851 TTGTCCAGCACTTCCGCG 60.665 61.111 0.00 0.00 36.85 6.46
104 105 3.175240 CACTTCCGCGCGACAGAG 61.175 66.667 34.63 23.27 0.00 3.35
107 108 4.656117 TTCCGCGCGACAGAGCAA 62.656 61.111 34.63 8.78 43.61 3.91
110 111 3.832171 CGCGCGACAGAGCAAGAC 61.832 66.667 28.94 0.00 43.61 3.01
111 112 2.431601 GCGCGACAGAGCAAGACT 60.432 61.111 12.10 0.00 42.91 3.24
112 113 2.024319 GCGCGACAGAGCAAGACTT 61.024 57.895 12.10 0.00 42.91 3.01
113 114 1.560860 GCGCGACAGAGCAAGACTTT 61.561 55.000 12.10 0.00 42.91 2.66
114 115 0.162507 CGCGACAGAGCAAGACTTTG 59.837 55.000 0.00 0.00 36.56 2.77
123 124 3.532138 CAAGACTTTGCACCACGTG 57.468 52.632 9.08 9.08 36.51 4.49
141 142 3.817960 GCACGAGCAACGAAAAAGA 57.182 47.368 10.05 0.00 45.77 2.52
142 143 1.663494 GCACGAGCAACGAAAAAGAG 58.337 50.000 10.05 0.00 45.77 2.85
143 144 1.660333 GCACGAGCAACGAAAAAGAGG 60.660 52.381 10.05 0.00 45.77 3.69
144 145 1.597663 CACGAGCAACGAAAAAGAGGT 59.402 47.619 10.05 0.00 45.77 3.85
145 146 1.865340 ACGAGCAACGAAAAAGAGGTC 59.135 47.619 10.05 0.00 45.77 3.85
146 147 1.136611 CGAGCAACGAAAAAGAGGTCG 60.137 52.381 0.00 0.00 45.77 4.79
147 148 1.194772 GAGCAACGAAAAAGAGGTCGG 59.805 52.381 0.00 0.00 41.56 4.79
148 149 0.237498 GCAACGAAAAAGAGGTCGGG 59.763 55.000 0.00 0.00 41.56 5.14
149 150 1.873698 CAACGAAAAAGAGGTCGGGA 58.126 50.000 0.00 0.00 41.56 5.14
150 151 1.529865 CAACGAAAAAGAGGTCGGGAC 59.470 52.381 0.00 0.00 41.56 4.46
151 152 1.046204 ACGAAAAAGAGGTCGGGACT 58.954 50.000 0.00 0.00 41.56 3.85
152 153 1.415289 ACGAAAAAGAGGTCGGGACTT 59.585 47.619 0.00 0.00 41.56 3.01
153 154 2.158856 ACGAAAAAGAGGTCGGGACTTT 60.159 45.455 0.00 0.00 41.56 2.66
154 155 2.223377 CGAAAAAGAGGTCGGGACTTTG 59.777 50.000 0.00 0.00 34.70 2.77
155 156 1.605753 AAAAGAGGTCGGGACTTTGC 58.394 50.000 0.00 0.00 34.70 3.68
156 157 0.472471 AAAGAGGTCGGGACTTTGCA 59.528 50.000 0.00 0.00 33.49 4.08
157 158 0.035458 AAGAGGTCGGGACTTTGCAG 59.965 55.000 0.00 0.00 0.00 4.41
158 159 2.032681 AGGTCGGGACTTTGCAGC 59.967 61.111 0.00 0.00 0.00 5.25
159 160 3.423154 GGTCGGGACTTTGCAGCG 61.423 66.667 0.00 0.00 0.00 5.18
160 161 2.665185 GTCGGGACTTTGCAGCGT 60.665 61.111 0.00 0.00 0.00 5.07
161 162 2.357034 TCGGGACTTTGCAGCGTC 60.357 61.111 8.48 8.48 0.00 5.19
162 163 2.664851 CGGGACTTTGCAGCGTCA 60.665 61.111 16.23 0.00 31.88 4.35
163 164 2.250939 CGGGACTTTGCAGCGTCAA 61.251 57.895 16.23 0.00 31.88 3.18
164 165 1.577328 CGGGACTTTGCAGCGTCAAT 61.577 55.000 16.23 0.00 31.88 2.57
165 166 0.598065 GGGACTTTGCAGCGTCAATT 59.402 50.000 16.23 0.00 31.88 2.32
166 167 1.000274 GGGACTTTGCAGCGTCAATTT 60.000 47.619 16.23 0.00 31.88 1.82
167 168 2.545742 GGGACTTTGCAGCGTCAATTTT 60.546 45.455 16.23 0.00 31.88 1.82
168 169 2.472488 GGACTTTGCAGCGTCAATTTTG 59.528 45.455 16.23 0.00 31.88 2.44
169 170 1.860326 ACTTTGCAGCGTCAATTTTGC 59.140 42.857 0.00 0.00 37.09 3.68
170 171 1.859703 CTTTGCAGCGTCAATTTTGCA 59.140 42.857 0.00 0.00 44.09 4.08
171 172 1.207390 TTGCAGCGTCAATTTTGCAC 58.793 45.000 0.00 0.00 45.29 4.57
172 173 0.385029 TGCAGCGTCAATTTTGCACT 59.615 45.000 0.00 0.00 41.23 4.40
173 174 1.055338 GCAGCGTCAATTTTGCACTC 58.945 50.000 0.00 0.00 36.59 3.51
174 175 1.689959 CAGCGTCAATTTTGCACTCC 58.310 50.000 0.00 0.00 0.00 3.85
175 176 1.267806 CAGCGTCAATTTTGCACTCCT 59.732 47.619 0.00 0.00 0.00 3.69
176 177 2.483877 CAGCGTCAATTTTGCACTCCTA 59.516 45.455 0.00 0.00 0.00 2.94
177 178 2.484264 AGCGTCAATTTTGCACTCCTAC 59.516 45.455 0.00 0.00 0.00 3.18
178 179 2.225491 GCGTCAATTTTGCACTCCTACA 59.775 45.455 0.00 0.00 0.00 2.74
179 180 3.304391 GCGTCAATTTTGCACTCCTACAA 60.304 43.478 0.00 0.00 0.00 2.41
180 181 4.615912 GCGTCAATTTTGCACTCCTACAAT 60.616 41.667 0.00 0.00 0.00 2.71
181 182 4.853196 CGTCAATTTTGCACTCCTACAATG 59.147 41.667 0.00 0.00 0.00 2.82
182 183 4.622740 GTCAATTTTGCACTCCTACAATGC 59.377 41.667 0.00 0.00 39.88 3.56
186 187 1.533625 TGCACTCCTACAATGCAACC 58.466 50.000 0.00 0.00 45.96 3.77
187 188 1.202867 TGCACTCCTACAATGCAACCA 60.203 47.619 0.00 0.00 45.96 3.67
188 189 1.470098 GCACTCCTACAATGCAACCAG 59.530 52.381 0.00 0.00 39.23 4.00
189 190 2.783135 CACTCCTACAATGCAACCAGT 58.217 47.619 0.00 0.00 0.00 4.00
190 191 2.485426 CACTCCTACAATGCAACCAGTG 59.515 50.000 0.00 0.00 42.43 3.66
191 192 2.086869 CTCCTACAATGCAACCAGTGG 58.913 52.381 7.91 7.91 41.12 4.00
192 193 1.423541 TCCTACAATGCAACCAGTGGT 59.576 47.619 9.70 9.70 41.12 4.16
193 194 1.812571 CCTACAATGCAACCAGTGGTC 59.187 52.381 17.06 4.45 41.12 4.02
194 195 1.464608 CTACAATGCAACCAGTGGTCG 59.535 52.381 17.06 5.30 41.12 4.79
195 196 1.172180 ACAATGCAACCAGTGGTCGG 61.172 55.000 17.06 12.37 41.12 4.79
196 197 1.603455 AATGCAACCAGTGGTCGGG 60.603 57.895 17.06 9.69 33.12 5.14
197 198 4.947147 TGCAACCAGTGGTCGGGC 62.947 66.667 17.06 19.36 33.12 6.13
199 200 4.263572 CAACCAGTGGTCGGGCCA 62.264 66.667 17.06 0.00 46.95 5.36
233 234 4.274147 TCTTCCTATCCAGAGTCTCACAC 58.726 47.826 1.94 0.00 0.00 3.82
236 237 2.356382 CCTATCCAGAGTCTCACACGAC 59.644 54.545 1.94 0.00 0.00 4.34
237 238 1.911057 ATCCAGAGTCTCACACGACA 58.089 50.000 1.94 0.00 36.38 4.35
238 239 1.687563 TCCAGAGTCTCACACGACAA 58.312 50.000 1.94 0.00 36.38 3.18
239 240 1.609072 TCCAGAGTCTCACACGACAAG 59.391 52.381 1.94 0.00 36.38 3.16
240 241 1.336332 CCAGAGTCTCACACGACAAGG 60.336 57.143 1.94 0.00 36.38 3.61
241 242 1.609072 CAGAGTCTCACACGACAAGGA 59.391 52.381 1.94 0.00 36.38 3.36
242 243 1.609555 AGAGTCTCACACGACAAGGAC 59.390 52.381 1.94 0.00 36.38 3.85
245 246 0.673985 TCTCACACGACAAGGACAGG 59.326 55.000 0.00 0.00 0.00 4.00
246 247 0.319900 CTCACACGACAAGGACAGGG 60.320 60.000 0.00 0.00 0.00 4.45
247 248 1.046472 TCACACGACAAGGACAGGGT 61.046 55.000 0.00 0.00 0.00 4.34
248 249 0.179056 CACACGACAAGGACAGGGTT 60.179 55.000 0.00 0.00 0.00 4.11
249 250 0.106149 ACACGACAAGGACAGGGTTC 59.894 55.000 0.00 0.00 0.00 3.62
250 251 0.602905 CACGACAAGGACAGGGTTCC 60.603 60.000 0.00 0.00 35.66 3.62
251 252 1.374252 CGACAAGGACAGGGTTCCG 60.374 63.158 0.00 0.00 41.04 4.30
261 262 1.229082 AGGGTTCCGCACCTCACTA 60.229 57.895 2.33 0.00 46.38 2.74
273 274 4.670221 CGCACCTCACTAGAAAATTCAAGC 60.670 45.833 0.00 0.00 0.00 4.01
274 275 4.670221 GCACCTCACTAGAAAATTCAAGCG 60.670 45.833 0.00 0.00 0.00 4.68
305 306 4.152402 AGCGAGCTATACAAAATATTGCCG 59.848 41.667 0.00 0.00 40.34 5.69
306 307 4.084013 GCGAGCTATACAAAATATTGCCGT 60.084 41.667 0.00 0.00 40.34 5.68
307 308 5.560183 GCGAGCTATACAAAATATTGCCGTT 60.560 40.000 0.00 0.00 40.34 4.44
338 344 9.525409 AAATTATTTTATCAGCATGCTCAAGAC 57.475 29.630 19.68 0.00 34.76 3.01
345 351 5.300969 TCAGCATGCTCAAGACATTTTAC 57.699 39.130 19.68 0.00 34.76 2.01
348 354 4.763793 AGCATGCTCAAGACATTTTACACT 59.236 37.500 16.30 0.00 0.00 3.55
349 355 5.939883 AGCATGCTCAAGACATTTTACACTA 59.060 36.000 16.30 0.00 0.00 2.74
384 390 9.959749 AGCGAGATAATTCTCTACTTTTCTTAG 57.040 33.333 0.00 0.00 45.30 2.18
385 391 9.187455 GCGAGATAATTCTCTACTTTTCTTAGG 57.813 37.037 0.00 0.00 45.30 2.69
386 392 9.685828 CGAGATAATTCTCTACTTTTCTTAGGG 57.314 37.037 0.00 0.00 45.30 3.53
387 393 9.990360 GAGATAATTCTCTACTTTTCTTAGGGG 57.010 37.037 0.00 0.00 44.29 4.79
388 394 9.508721 AGATAATTCTCTACTTTTCTTAGGGGT 57.491 33.333 0.00 0.00 0.00 4.95
393 399 8.912614 TTCTCTACTTTTCTTAGGGGTAATCT 57.087 34.615 0.00 0.00 0.00 2.40
397 403 9.779951 TCTACTTTTCTTAGGGGTAATCTAAGT 57.220 33.333 9.70 0.00 42.41 2.24
420 426 8.947055 AGTTTTATTCATCAAAAAGCACAAGT 57.053 26.923 0.00 0.00 0.00 3.16
421 427 9.382275 AGTTTTATTCATCAAAAAGCACAAGTT 57.618 25.926 0.00 0.00 0.00 2.66
422 428 9.424659 GTTTTATTCATCAAAAAGCACAAGTTG 57.575 29.630 0.00 0.00 0.00 3.16
423 429 8.715191 TTTATTCATCAAAAAGCACAAGTTGT 57.285 26.923 1.64 1.64 0.00 3.32
433 439 1.608055 CACAAGTTGTGGGATGCAGA 58.392 50.000 25.45 0.00 44.27 4.26
434 440 2.165167 CACAAGTTGTGGGATGCAGAT 58.835 47.619 25.45 0.00 44.27 2.90
435 441 2.559668 CACAAGTTGTGGGATGCAGATT 59.440 45.455 25.45 0.00 44.27 2.40
436 442 2.821969 ACAAGTTGTGGGATGCAGATTC 59.178 45.455 7.96 0.00 0.00 2.52
437 443 1.742761 AGTTGTGGGATGCAGATTCG 58.257 50.000 0.00 0.00 0.00 3.34
438 444 1.278985 AGTTGTGGGATGCAGATTCGA 59.721 47.619 0.00 0.00 0.00 3.71
439 445 2.092753 AGTTGTGGGATGCAGATTCGAT 60.093 45.455 0.00 0.00 0.00 3.59
440 446 2.245159 TGTGGGATGCAGATTCGATC 57.755 50.000 0.00 0.00 0.00 3.69
441 447 1.485895 TGTGGGATGCAGATTCGATCA 59.514 47.619 0.00 0.00 0.00 2.92
442 448 2.105306 TGTGGGATGCAGATTCGATCAT 59.895 45.455 0.00 0.00 0.00 2.45
443 449 2.483106 GTGGGATGCAGATTCGATCATG 59.517 50.000 0.00 0.00 0.00 3.07
444 450 2.082231 GGGATGCAGATTCGATCATGG 58.918 52.381 0.00 0.00 0.00 3.66
445 451 2.082231 GGATGCAGATTCGATCATGGG 58.918 52.381 0.00 0.00 0.00 4.00
446 452 2.289882 GGATGCAGATTCGATCATGGGA 60.290 50.000 0.00 0.00 0.00 4.37
447 453 3.607741 GATGCAGATTCGATCATGGGAT 58.392 45.455 0.00 0.00 36.13 3.85
448 454 3.497103 TGCAGATTCGATCATGGGATT 57.503 42.857 0.00 0.00 32.67 3.01
449 455 3.143728 TGCAGATTCGATCATGGGATTG 58.856 45.455 0.00 0.00 36.41 2.67
450 456 3.181452 TGCAGATTCGATCATGGGATTGA 60.181 43.478 0.00 0.00 41.27 2.57
451 457 3.188048 GCAGATTCGATCATGGGATTGAC 59.812 47.826 0.00 0.00 42.40 3.18
452 458 3.750130 CAGATTCGATCATGGGATTGACC 59.250 47.826 0.00 0.00 42.40 4.02
453 459 3.392285 AGATTCGATCATGGGATTGACCA 59.608 43.478 0.00 0.00 42.40 4.02
454 460 3.643199 TTCGATCATGGGATTGACCAA 57.357 42.857 0.00 0.00 45.13 3.67
455 461 3.198409 TCGATCATGGGATTGACCAAG 57.802 47.619 0.00 0.00 45.13 3.61
456 462 2.505407 TCGATCATGGGATTGACCAAGT 59.495 45.455 0.00 0.00 45.13 3.16
457 463 2.874701 CGATCATGGGATTGACCAAGTC 59.125 50.000 0.00 0.00 45.13 3.01
458 464 3.682436 CGATCATGGGATTGACCAAGTCA 60.682 47.826 0.00 0.00 45.13 3.41
459 465 3.071874 TCATGGGATTGACCAAGTCAC 57.928 47.619 0.00 0.00 45.13 3.67
460 466 2.374839 TCATGGGATTGACCAAGTCACA 59.625 45.455 0.00 0.00 45.13 3.58
461 467 2.566833 TGGGATTGACCAAGTCACAG 57.433 50.000 0.00 0.00 42.60 3.66
462 468 2.054021 TGGGATTGACCAAGTCACAGA 58.946 47.619 0.00 0.00 42.60 3.41
463 469 2.644299 TGGGATTGACCAAGTCACAGAT 59.356 45.455 0.00 0.00 42.60 2.90
464 470 3.012518 GGGATTGACCAAGTCACAGATG 58.987 50.000 0.00 0.00 42.60 2.90
465 471 3.012518 GGATTGACCAAGTCACAGATGG 58.987 50.000 0.00 0.00 42.60 3.51
469 475 2.550830 ACCAAGTCACAGATGGTGTC 57.449 50.000 0.00 0.00 45.47 3.67
470 476 2.050144 ACCAAGTCACAGATGGTGTCT 58.950 47.619 0.00 0.00 45.47 3.41
471 477 2.037772 ACCAAGTCACAGATGGTGTCTC 59.962 50.000 0.00 0.00 45.47 3.36
472 478 4.514768 ACCAAGTCACAGATGGTGTCTCA 61.515 47.826 0.00 0.00 45.47 3.27
473 479 6.309757 ACCAAGTCACAGATGGTGTCTCAG 62.310 50.000 0.00 0.00 45.47 3.35
476 482 2.376808 CACAGATGGTGTCTCAGACC 57.623 55.000 1.24 0.00 42.75 3.85
477 483 1.898472 CACAGATGGTGTCTCAGACCT 59.102 52.381 1.24 0.00 42.75 3.85
478 484 3.092301 CACAGATGGTGTCTCAGACCTA 58.908 50.000 1.24 0.00 42.75 3.08
479 485 3.130164 CACAGATGGTGTCTCAGACCTAG 59.870 52.174 1.24 0.00 42.75 3.02
480 486 2.100584 CAGATGGTGTCTCAGACCTAGC 59.899 54.545 1.24 0.00 34.00 3.42
481 487 1.066303 GATGGTGTCTCAGACCTAGCG 59.934 57.143 1.24 0.00 34.26 4.26
482 488 0.037734 TGGTGTCTCAGACCTAGCGA 59.962 55.000 1.24 0.00 34.26 4.93
483 489 0.452585 GGTGTCTCAGACCTAGCGAC 59.547 60.000 1.24 0.00 0.00 5.19
484 490 1.166129 GTGTCTCAGACCTAGCGACA 58.834 55.000 1.24 0.00 32.71 4.35
485 491 1.131504 GTGTCTCAGACCTAGCGACAG 59.868 57.143 1.24 0.00 35.52 3.51
486 492 1.003233 TGTCTCAGACCTAGCGACAGA 59.997 52.381 1.24 0.00 31.62 3.41
487 493 1.668751 GTCTCAGACCTAGCGACAGAG 59.331 57.143 0.00 0.00 0.00 3.35
488 494 1.555533 TCTCAGACCTAGCGACAGAGA 59.444 52.381 0.00 0.00 0.00 3.10
489 495 2.027100 TCTCAGACCTAGCGACAGAGAA 60.027 50.000 0.00 0.00 0.00 2.87
490 496 2.948979 CTCAGACCTAGCGACAGAGAAT 59.051 50.000 0.00 0.00 0.00 2.40
491 497 2.685388 TCAGACCTAGCGACAGAGAATG 59.315 50.000 0.00 0.00 0.00 2.67
492 498 1.407258 AGACCTAGCGACAGAGAATGC 59.593 52.381 0.00 0.00 0.00 3.56
493 499 1.407258 GACCTAGCGACAGAGAATGCT 59.593 52.381 0.00 0.00 41.32 3.79
494 500 1.827969 ACCTAGCGACAGAGAATGCTT 59.172 47.619 0.00 0.00 38.82 3.91
495 501 2.200067 CCTAGCGACAGAGAATGCTTG 58.800 52.381 0.00 0.00 38.82 4.01
496 502 2.200067 CTAGCGACAGAGAATGCTTGG 58.800 52.381 0.00 0.00 38.82 3.61
497 503 1.023513 AGCGACAGAGAATGCTTGGC 61.024 55.000 0.00 0.00 32.89 4.52
498 504 1.986575 GCGACAGAGAATGCTTGGCC 61.987 60.000 0.00 0.00 0.00 5.36
515 521 2.509548 TGGCCAACTTATGTGCCTCTAT 59.490 45.455 0.61 0.00 42.54 1.98
526 532 8.213679 ACTTATGTGCCTCTATGTTCACATTAT 58.786 33.333 11.24 0.00 44.83 1.28
595 612 9.295825 AGTAGATCTCACTAATAATGACCTCTG 57.704 37.037 0.00 0.00 0.00 3.35
605 622 3.864789 AATGACCTCTGGACTTGTTGT 57.135 42.857 0.00 0.00 0.00 3.32
622 639 3.491639 TGTTGTTTATGTCCAAGACGACG 59.508 43.478 0.00 0.00 34.95 5.12
695 713 3.182967 CACGCTCTGGAACTAGTTGATC 58.817 50.000 14.14 0.00 0.00 2.92
803 823 1.342174 CAACAAACTTGCTCCCATGCT 59.658 47.619 0.00 0.00 0.00 3.79
905 944 3.844911 TGGTACTACCACAATGGCG 57.155 52.632 3.57 0.00 44.79 5.69
1063 1162 0.460987 GTCACTTCATCGGAGCCCAG 60.461 60.000 0.00 0.00 0.00 4.45
1173 1275 4.704833 GCCGGGCTGCTCAACTCA 62.705 66.667 12.87 0.00 0.00 3.41
1443 3592 4.176851 GTCGAGTCGGGAGCGACC 62.177 72.222 13.54 0.00 46.15 4.79
1640 3789 1.671742 GCAGAGTCCTTGACCGGAA 59.328 57.895 9.46 0.00 34.20 4.30
1653 3802 1.153168 CCGGAACTCAATGGGCGAT 60.153 57.895 0.00 0.00 0.00 4.58
2025 4174 3.986006 TCGACGGCCAAGTTCGCT 61.986 61.111 2.24 0.00 0.00 4.93
2181 4330 1.760875 GACCGGGTCCATCCAGCTA 60.761 63.158 16.55 0.00 38.11 3.32
2217 4366 1.527433 CCATGGCGCGGATAGAGAGA 61.527 60.000 8.83 0.00 0.00 3.10
2293 4442 2.710724 GAACTGGAACCGGTCGCAGT 62.711 60.000 8.04 13.46 38.60 4.40
2595 4744 4.561105 CTCCCTTGAATATTAGAGCCGAC 58.439 47.826 0.00 0.00 0.00 4.79
2660 4810 5.300792 ACTTTTCGTCCTTTAATTCTTGGCA 59.699 36.000 0.00 0.00 0.00 4.92
2661 4811 5.371115 TTTCGTCCTTTAATTCTTGGCAG 57.629 39.130 0.00 0.00 0.00 4.85
2663 4813 4.253685 TCGTCCTTTAATTCTTGGCAGAG 58.746 43.478 0.00 0.00 0.00 3.35
2680 4830 4.102367 GGCAGAGTCTAGATTTGATCCCTT 59.898 45.833 0.00 0.00 0.00 3.95
2686 4836 9.890915 AGAGTCTAGATTTGATCCCTTAACTAT 57.109 33.333 0.00 0.00 0.00 2.12
2702 4852 6.656270 CCTTAACTATAAAACCGGACAACCTT 59.344 38.462 9.46 0.00 0.00 3.50
2705 4855 4.999311 ACTATAAAACCGGACAACCTTCAC 59.001 41.667 9.46 0.00 0.00 3.18
2717 4867 2.348411 ACCTTCACCACCAACTCTTG 57.652 50.000 0.00 0.00 0.00 3.02
2721 4871 3.891366 CCTTCACCACCAACTCTTGAAAT 59.109 43.478 0.00 0.00 0.00 2.17
2726 4876 4.763793 CACCACCAACTCTTGAAATCAGAT 59.236 41.667 0.00 0.00 0.00 2.90
2733 4883 8.571336 ACCAACTCTTGAAATCAGATAAGTTTG 58.429 33.333 0.00 0.00 0.00 2.93
2740 4890 5.015178 TGAAATCAGATAAGTTTGGTCCCCT 59.985 40.000 0.00 0.00 0.00 4.79
2755 4905 0.178992 CCCCTGACTCAACCAAAGCA 60.179 55.000 0.00 0.00 0.00 3.91
2786 4936 3.316308 GCTGACTCAACATGGTTTTGACT 59.684 43.478 0.00 0.00 0.00 3.41
2797 4947 1.886542 GGTTTTGACTGGGTCATGTCC 59.113 52.381 0.00 0.00 42.40 4.02
2872 5022 3.806625 AACAGTTGACTTGCAATTGCT 57.193 38.095 29.37 11.24 45.15 3.91
2873 5023 3.088194 ACAGTTGACTTGCAATTGCTG 57.912 42.857 29.37 22.98 45.15 4.41
2874 5024 7.681626 CAAACAGTTGACTTGCAATTGCTGC 62.682 44.000 29.37 16.37 45.15 5.25
2883 5033 1.653667 CAATTGCTGCACCGTGACA 59.346 52.632 0.00 0.00 0.00 3.58
2884 5034 0.661187 CAATTGCTGCACCGTGACAC 60.661 55.000 0.00 0.00 0.00 3.67
2907 5064 3.685214 GAGCGTGCCGTCAGTCGAT 62.685 63.158 0.00 0.00 42.86 3.59
2919 5076 4.819761 GTCGATGAGCCAGCGCCA 62.820 66.667 2.29 0.00 43.19 5.69
2920 5077 3.853487 TCGATGAGCCAGCGCCAT 61.853 61.111 2.29 0.00 43.19 4.40
2923 5080 2.203167 ATGAGCCAGCGCCATCAG 60.203 61.111 2.29 0.00 34.57 2.90
2924 5081 2.937379 GATGAGCCAGCGCCATCAGT 62.937 60.000 15.82 2.49 40.02 3.41
2925 5082 2.894387 GAGCCAGCGCCATCAGTC 60.894 66.667 2.29 0.00 34.57 3.51
2926 5083 4.827087 AGCCAGCGCCATCAGTCG 62.827 66.667 2.29 0.00 34.57 4.18
2928 5085 2.887568 CCAGCGCCATCAGTCGAC 60.888 66.667 7.70 7.70 0.00 4.20
2930 5087 3.440415 AGCGCCATCAGTCGACGA 61.440 61.111 10.46 11.04 0.00 4.20
2932 5089 2.485582 CGCCATCAGTCGACGAGT 59.514 61.111 10.46 0.00 0.00 4.18
2933 5090 1.583967 CGCCATCAGTCGACGAGTC 60.584 63.158 10.46 3.76 0.00 3.36
2934 5091 1.506718 GCCATCAGTCGACGAGTCA 59.493 57.895 10.46 0.00 0.00 3.41
2937 5094 1.202087 CCATCAGTCGACGAGTCAGTC 60.202 57.143 10.46 5.40 37.76 3.51
2949 5106 1.007734 GTCAGTCGACGAGCCAACA 60.008 57.895 10.46 0.00 31.07 3.33
2951 5108 1.007271 CAGTCGACGAGCCAACACT 60.007 57.895 10.46 0.00 0.00 3.55
2952 5109 1.007271 AGTCGACGAGCCAACACTG 60.007 57.895 10.46 0.00 0.00 3.66
2953 5110 1.299926 GTCGACGAGCCAACACTGT 60.300 57.895 0.00 0.00 0.00 3.55
2957 5241 1.227853 ACGAGCCAACACTGTTCCC 60.228 57.895 0.00 0.00 0.00 3.97
2961 5245 2.200337 GCCAACACTGTTCCCCACC 61.200 63.158 0.00 0.00 0.00 4.61
2989 5273 4.974721 CCCCGGCAAGCCTTGTGT 62.975 66.667 9.73 0.00 0.00 3.72
3018 5302 4.988598 CGTCCGTGCTGGCCACTT 62.989 66.667 0.00 0.00 42.42 3.16
3021 5305 2.281761 CCGTGCTGGCCACTTCTT 60.282 61.111 0.00 0.00 42.42 2.52
3065 5359 3.653009 CTGCACCACACGGCACAG 61.653 66.667 0.00 0.00 35.86 3.66
3085 5379 1.021390 CAAGCATCCACCACGACCTC 61.021 60.000 0.00 0.00 0.00 3.85
3090 5384 0.252284 ATCCACCACGACCTCTCCTT 60.252 55.000 0.00 0.00 0.00 3.36
3467 5761 3.513462 CGTTGAGCAACACGAAATACA 57.487 42.857 13.17 0.00 41.20 2.29
3468 5762 3.867665 CGTTGAGCAACACGAAATACAA 58.132 40.909 13.17 0.00 41.20 2.41
3469 5763 4.463209 CGTTGAGCAACACGAAATACAAT 58.537 39.130 13.17 0.00 41.20 2.71
3470 5764 4.318071 CGTTGAGCAACACGAAATACAATG 59.682 41.667 13.17 0.00 41.20 2.82
3471 5765 4.418013 TGAGCAACACGAAATACAATGG 57.582 40.909 0.00 0.00 0.00 3.16
3472 5766 3.190327 TGAGCAACACGAAATACAATGGG 59.810 43.478 0.00 0.00 0.00 4.00
3473 5767 3.417101 AGCAACACGAAATACAATGGGA 58.583 40.909 0.00 0.00 0.00 4.37
3474 5768 3.440173 AGCAACACGAAATACAATGGGAG 59.560 43.478 0.00 0.00 0.00 4.30
3475 5769 3.427503 GCAACACGAAATACAATGGGAGG 60.428 47.826 0.00 0.00 0.00 4.30
3476 5770 2.999331 ACACGAAATACAATGGGAGGG 58.001 47.619 0.00 0.00 0.00 4.30
3477 5771 2.574369 ACACGAAATACAATGGGAGGGA 59.426 45.455 0.00 0.00 0.00 4.20
3478 5772 3.202151 ACACGAAATACAATGGGAGGGAT 59.798 43.478 0.00 0.00 0.00 3.85
3479 5773 3.565482 CACGAAATACAATGGGAGGGATG 59.435 47.826 0.00 0.00 0.00 3.51
3480 5774 3.149196 CGAAATACAATGGGAGGGATGG 58.851 50.000 0.00 0.00 0.00 3.51
3481 5775 3.181445 CGAAATACAATGGGAGGGATGGA 60.181 47.826 0.00 0.00 0.00 3.41
3482 5776 4.401925 GAAATACAATGGGAGGGATGGAG 58.598 47.826 0.00 0.00 0.00 3.86
3483 5777 1.819753 TACAATGGGAGGGATGGAGG 58.180 55.000 0.00 0.00 0.00 4.30
3484 5778 0.253820 ACAATGGGAGGGATGGAGGT 60.254 55.000 0.00 0.00 0.00 3.85
3485 5779 0.929244 CAATGGGAGGGATGGAGGTT 59.071 55.000 0.00 0.00 0.00 3.50
3486 5780 1.133668 CAATGGGAGGGATGGAGGTTC 60.134 57.143 0.00 0.00 0.00 3.62
3487 5781 1.056700 ATGGGAGGGATGGAGGTTCG 61.057 60.000 0.00 0.00 0.00 3.95
3488 5782 2.444256 GGGAGGGATGGAGGTTCGG 61.444 68.421 0.00 0.00 0.00 4.30
3489 5783 2.444256 GGAGGGATGGAGGTTCGGG 61.444 68.421 0.00 0.00 0.00 5.14
3490 5784 3.090532 AGGGATGGAGGTTCGGGC 61.091 66.667 0.00 0.00 0.00 6.13
3491 5785 3.090532 GGGATGGAGGTTCGGGCT 61.091 66.667 0.00 0.00 0.00 5.19
3492 5786 2.190578 GGATGGAGGTTCGGGCTG 59.809 66.667 0.00 0.00 0.00 4.85
3493 5787 2.514824 GATGGAGGTTCGGGCTGC 60.515 66.667 0.00 0.00 0.00 5.25
3494 5788 4.473520 ATGGAGGTTCGGGCTGCG 62.474 66.667 0.00 0.00 0.00 5.18
3536 5830 3.114616 CGTGAGCTTGTGGGCGAG 61.115 66.667 0.00 0.00 37.29 5.03
3537 5831 2.031163 GTGAGCTTGTGGGCGAGT 59.969 61.111 0.00 0.00 37.29 4.18
3538 5832 2.031012 TGAGCTTGTGGGCGAGTG 59.969 61.111 0.00 0.00 37.29 3.51
3539 5833 2.743928 GAGCTTGTGGGCGAGTGG 60.744 66.667 0.00 0.00 37.29 4.00
3540 5834 3.537206 GAGCTTGTGGGCGAGTGGT 62.537 63.158 0.00 0.00 37.29 4.16
3541 5835 3.357079 GCTTGTGGGCGAGTGGTG 61.357 66.667 0.00 0.00 0.00 4.17
3542 5836 3.357079 CTTGTGGGCGAGTGGTGC 61.357 66.667 0.00 0.00 0.00 5.01
3551 5845 4.083862 GAGTGGTGCGGGGAGGTC 62.084 72.222 0.00 0.00 0.00 3.85
3552 5846 4.954118 AGTGGTGCGGGGAGGTCA 62.954 66.667 0.00 0.00 0.00 4.02
3553 5847 4.394712 GTGGTGCGGGGAGGTCAG 62.395 72.222 0.00 0.00 0.00 3.51
3554 5848 4.954118 TGGTGCGGGGAGGTCAGT 62.954 66.667 0.00 0.00 0.00 3.41
3555 5849 2.682494 GGTGCGGGGAGGTCAGTA 60.682 66.667 0.00 0.00 0.00 2.74
3556 5850 2.064581 GGTGCGGGGAGGTCAGTAT 61.065 63.158 0.00 0.00 0.00 2.12
3557 5851 1.623542 GGTGCGGGGAGGTCAGTATT 61.624 60.000 0.00 0.00 0.00 1.89
3558 5852 0.462047 GTGCGGGGAGGTCAGTATTG 60.462 60.000 0.00 0.00 0.00 1.90
3559 5853 1.146263 GCGGGGAGGTCAGTATTGG 59.854 63.158 0.00 0.00 0.00 3.16
3560 5854 1.830145 CGGGGAGGTCAGTATTGGG 59.170 63.158 0.00 0.00 0.00 4.12
3561 5855 1.696097 CGGGGAGGTCAGTATTGGGG 61.696 65.000 0.00 0.00 0.00 4.96
3562 5856 0.327191 GGGGAGGTCAGTATTGGGGA 60.327 60.000 0.00 0.00 0.00 4.81
3563 5857 1.591768 GGGAGGTCAGTATTGGGGAA 58.408 55.000 0.00 0.00 0.00 3.97
3564 5858 2.136026 GGGAGGTCAGTATTGGGGAAT 58.864 52.381 0.00 0.00 0.00 3.01
3565 5859 2.158608 GGGAGGTCAGTATTGGGGAATG 60.159 54.545 0.00 0.00 0.00 2.67
3566 5860 2.509964 GGAGGTCAGTATTGGGGAATGT 59.490 50.000 0.00 0.00 0.00 2.71
3567 5861 3.714798 GGAGGTCAGTATTGGGGAATGTA 59.285 47.826 0.00 0.00 0.00 2.29
3568 5862 4.202367 GGAGGTCAGTATTGGGGAATGTAG 60.202 50.000 0.00 0.00 0.00 2.74
3569 5863 3.136626 AGGTCAGTATTGGGGAATGTAGC 59.863 47.826 0.00 0.00 0.00 3.58
3570 5864 3.118038 GGTCAGTATTGGGGAATGTAGCA 60.118 47.826 0.00 0.00 0.00 3.49
3571 5865 4.130118 GTCAGTATTGGGGAATGTAGCAG 58.870 47.826 0.00 0.00 0.00 4.24
3572 5866 4.037222 TCAGTATTGGGGAATGTAGCAGA 58.963 43.478 0.00 0.00 0.00 4.26
3573 5867 4.473196 TCAGTATTGGGGAATGTAGCAGAA 59.527 41.667 0.00 0.00 0.00 3.02
3574 5868 5.045213 TCAGTATTGGGGAATGTAGCAGAAA 60.045 40.000 0.00 0.00 0.00 2.52
3575 5869 5.829924 CAGTATTGGGGAATGTAGCAGAAAT 59.170 40.000 0.00 0.00 0.00 2.17
3576 5870 6.322201 CAGTATTGGGGAATGTAGCAGAAATT 59.678 38.462 0.00 0.00 0.00 1.82
3577 5871 5.859205 ATTGGGGAATGTAGCAGAAATTC 57.141 39.130 0.00 0.00 0.00 2.17
3578 5872 4.314522 TGGGGAATGTAGCAGAAATTCA 57.685 40.909 0.00 0.00 32.96 2.57
3579 5873 4.671831 TGGGGAATGTAGCAGAAATTCAA 58.328 39.130 0.00 0.00 32.96 2.69
3580 5874 5.083122 TGGGGAATGTAGCAGAAATTCAAA 58.917 37.500 0.00 0.00 32.96 2.69
3581 5875 5.541868 TGGGGAATGTAGCAGAAATTCAAAA 59.458 36.000 0.00 0.00 32.96 2.44
3582 5876 6.213195 TGGGGAATGTAGCAGAAATTCAAAAT 59.787 34.615 0.00 0.00 32.96 1.82
3583 5877 7.105588 GGGGAATGTAGCAGAAATTCAAAATT 58.894 34.615 0.00 0.00 32.96 1.82
3584 5878 7.607607 GGGGAATGTAGCAGAAATTCAAAATTT 59.392 33.333 0.00 0.00 32.96 1.82
3585 5879 8.659491 GGGAATGTAGCAGAAATTCAAAATTTC 58.341 33.333 14.41 14.41 38.07 2.17
3586 5880 8.659491 GGAATGTAGCAGAAATTCAAAATTTCC 58.341 33.333 17.26 7.18 38.44 3.13
3587 5881 8.552083 AATGTAGCAGAAATTCAAAATTTCCC 57.448 30.769 17.26 11.18 38.44 3.97
3588 5882 7.301868 TGTAGCAGAAATTCAAAATTTCCCT 57.698 32.000 17.26 15.85 38.44 4.20
3589 5883 8.415950 TGTAGCAGAAATTCAAAATTTCCCTA 57.584 30.769 17.26 15.14 38.44 3.53
3590 5884 8.303876 TGTAGCAGAAATTCAAAATTTCCCTAC 58.696 33.333 24.99 24.99 39.91 3.18
3591 5885 6.389906 AGCAGAAATTCAAAATTTCCCTACG 58.610 36.000 17.26 6.63 38.44 3.51
3592 5886 6.015434 AGCAGAAATTCAAAATTTCCCTACGT 60.015 34.615 17.26 0.00 38.44 3.57
3593 5887 6.089417 GCAGAAATTCAAAATTTCCCTACGTG 59.911 38.462 17.26 11.18 38.44 4.49
3594 5888 7.145323 CAGAAATTCAAAATTTCCCTACGTGT 58.855 34.615 17.26 0.00 38.44 4.49
3595 5889 7.326063 CAGAAATTCAAAATTTCCCTACGTGTC 59.674 37.037 17.26 0.00 38.44 3.67
3596 5890 6.642707 AATTCAAAATTTCCCTACGTGTCA 57.357 33.333 0.00 0.00 0.00 3.58
3597 5891 5.427036 TTCAAAATTTCCCTACGTGTCAC 57.573 39.130 0.00 0.00 0.00 3.67
3598 5892 3.816523 TCAAAATTTCCCTACGTGTCACC 59.183 43.478 0.00 0.00 0.00 4.02
3599 5893 3.495434 AAATTTCCCTACGTGTCACCA 57.505 42.857 0.00 0.00 0.00 4.17
3600 5894 3.495434 AATTTCCCTACGTGTCACCAA 57.505 42.857 0.00 0.00 0.00 3.67
3601 5895 2.536761 TTTCCCTACGTGTCACCAAG 57.463 50.000 0.00 0.00 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.402472 CGGAAGACAAATAATTATGGCTAACAA 58.598 33.333 0.00 0.00 32.44 2.83
4 5 7.012894 CCGGAAGACAAATAATTATGGCTAACA 59.987 37.037 0.00 0.00 32.44 2.41
5 6 7.012989 ACCGGAAGACAAATAATTATGGCTAAC 59.987 37.037 9.46 0.00 32.44 2.34
6 7 7.012894 CACCGGAAGACAAATAATTATGGCTAA 59.987 37.037 9.46 0.00 32.44 3.09
7 8 6.485313 CACCGGAAGACAAATAATTATGGCTA 59.515 38.462 9.46 0.00 32.44 3.93
8 9 5.299279 CACCGGAAGACAAATAATTATGGCT 59.701 40.000 9.46 0.00 36.12 4.75
9 10 5.519722 CACCGGAAGACAAATAATTATGGC 58.480 41.667 9.46 0.00 0.00 4.40
10 11 5.067153 TGCACCGGAAGACAAATAATTATGG 59.933 40.000 9.46 0.00 0.00 2.74
11 12 6.130298 TGCACCGGAAGACAAATAATTATG 57.870 37.500 9.46 0.00 0.00 1.90
12 13 6.560711 GTTGCACCGGAAGACAAATAATTAT 58.439 36.000 9.46 0.00 0.00 1.28
13 14 5.391097 CGTTGCACCGGAAGACAAATAATTA 60.391 40.000 9.46 0.00 0.00 1.40
14 15 4.614993 CGTTGCACCGGAAGACAAATAATT 60.615 41.667 9.46 0.00 0.00 1.40
15 16 3.119990 CGTTGCACCGGAAGACAAATAAT 60.120 43.478 9.46 0.00 0.00 1.28
16 17 2.224549 CGTTGCACCGGAAGACAAATAA 59.775 45.455 9.46 0.00 0.00 1.40
17 18 1.801771 CGTTGCACCGGAAGACAAATA 59.198 47.619 9.46 0.00 0.00 1.40
18 19 0.591170 CGTTGCACCGGAAGACAAAT 59.409 50.000 9.46 0.00 0.00 2.32
19 20 2.018544 CGTTGCACCGGAAGACAAA 58.981 52.632 9.46 0.00 0.00 2.83
20 21 2.539338 GCGTTGCACCGGAAGACAA 61.539 57.895 9.46 3.54 0.00 3.18
21 22 2.970324 GCGTTGCACCGGAAGACA 60.970 61.111 9.46 0.00 0.00 3.41
22 23 2.970324 TGCGTTGCACCGGAAGAC 60.970 61.111 9.46 0.00 31.71 3.01
33 34 3.601685 AAAAGGGCCCGTGCGTTG 61.602 61.111 18.44 0.00 38.85 4.10
34 35 3.601685 CAAAAGGGCCCGTGCGTT 61.602 61.111 18.44 0.59 38.85 4.84
37 38 2.675075 TAGCAAAAGGGCCCGTGC 60.675 61.111 30.21 30.21 37.26 5.34
38 39 0.035820 TACTAGCAAAAGGGCCCGTG 60.036 55.000 18.44 17.24 0.00 4.94
39 40 0.252197 CTACTAGCAAAAGGGCCCGT 59.748 55.000 18.44 11.44 0.00 5.28
40 41 1.095807 GCTACTAGCAAAAGGGCCCG 61.096 60.000 18.44 2.33 41.89 6.13
41 42 2.795165 GCTACTAGCAAAAGGGCCC 58.205 57.895 16.46 16.46 41.89 5.80
59 60 8.415553 TGGACAAGATAATTGCATCCTTAAATG 58.584 33.333 0.00 0.00 0.00 2.32
60 61 8.537728 TGGACAAGATAATTGCATCCTTAAAT 57.462 30.769 0.00 0.00 0.00 1.40
61 62 7.416664 GCTGGACAAGATAATTGCATCCTTAAA 60.417 37.037 0.00 0.00 0.00 1.52
62 63 6.039717 GCTGGACAAGATAATTGCATCCTTAA 59.960 38.462 0.00 0.00 0.00 1.85
63 64 5.532406 GCTGGACAAGATAATTGCATCCTTA 59.468 40.000 0.00 0.00 0.00 2.69
64 65 4.340381 GCTGGACAAGATAATTGCATCCTT 59.660 41.667 0.00 0.00 0.00 3.36
65 66 3.887716 GCTGGACAAGATAATTGCATCCT 59.112 43.478 0.00 0.00 0.00 3.24
66 67 3.633525 TGCTGGACAAGATAATTGCATCC 59.366 43.478 0.00 0.00 0.00 3.51
67 68 4.337555 AGTGCTGGACAAGATAATTGCATC 59.662 41.667 1.24 0.00 0.00 3.91
68 69 4.275810 AGTGCTGGACAAGATAATTGCAT 58.724 39.130 1.24 0.00 0.00 3.96
69 70 3.689347 AGTGCTGGACAAGATAATTGCA 58.311 40.909 1.24 0.00 0.00 4.08
70 71 4.439289 GGAAGTGCTGGACAAGATAATTGC 60.439 45.833 1.24 0.00 0.00 3.56
71 72 4.201851 CGGAAGTGCTGGACAAGATAATTG 60.202 45.833 1.24 0.00 0.00 2.32
72 73 3.941483 CGGAAGTGCTGGACAAGATAATT 59.059 43.478 1.24 0.00 0.00 1.40
73 74 3.535561 CGGAAGTGCTGGACAAGATAAT 58.464 45.455 1.24 0.00 0.00 1.28
74 75 2.935238 GCGGAAGTGCTGGACAAGATAA 60.935 50.000 1.24 0.00 0.00 1.75
75 76 1.405526 GCGGAAGTGCTGGACAAGATA 60.406 52.381 1.24 0.00 0.00 1.98
76 77 0.674895 GCGGAAGTGCTGGACAAGAT 60.675 55.000 1.24 0.00 0.00 2.40
77 78 1.301716 GCGGAAGTGCTGGACAAGA 60.302 57.895 1.24 0.00 0.00 3.02
78 79 2.671177 CGCGGAAGTGCTGGACAAG 61.671 63.158 0.00 0.00 33.37 3.16
79 80 2.664851 CGCGGAAGTGCTGGACAA 60.665 61.111 0.00 0.00 33.37 3.18
87 88 3.175240 CTCTGTCGCGCGGAAGTG 61.175 66.667 31.69 22.33 46.39 3.16
90 91 4.656117 TTGCTCTGTCGCGCGGAA 62.656 61.111 31.69 17.48 31.00 4.30
93 94 3.832171 GTCTTGCTCTGTCGCGCG 61.832 66.667 26.76 26.76 0.00 6.86
94 95 1.560860 AAAGTCTTGCTCTGTCGCGC 61.561 55.000 0.00 0.00 0.00 6.86
95 96 0.162507 CAAAGTCTTGCTCTGTCGCG 59.837 55.000 0.00 0.00 0.00 5.87
105 106 3.532138 CACGTGGTGCAAAGTCTTG 57.468 52.632 7.95 0.00 35.49 3.02
123 124 1.660333 CCTCTTTTTCGTTGCTCGTGC 60.660 52.381 1.71 1.71 40.80 5.34
124 125 1.597663 ACCTCTTTTTCGTTGCTCGTG 59.402 47.619 2.39 0.00 40.80 4.35
125 126 1.865340 GACCTCTTTTTCGTTGCTCGT 59.135 47.619 2.39 0.00 40.80 4.18
126 127 1.136611 CGACCTCTTTTTCGTTGCTCG 60.137 52.381 0.00 0.00 41.41 5.03
127 128 1.194772 CCGACCTCTTTTTCGTTGCTC 59.805 52.381 0.00 0.00 33.23 4.26
128 129 1.226746 CCGACCTCTTTTTCGTTGCT 58.773 50.000 0.00 0.00 33.23 3.91
129 130 0.237498 CCCGACCTCTTTTTCGTTGC 59.763 55.000 0.00 0.00 33.23 4.17
130 131 1.529865 GTCCCGACCTCTTTTTCGTTG 59.470 52.381 0.00 0.00 33.23 4.10
131 132 1.415289 AGTCCCGACCTCTTTTTCGTT 59.585 47.619 0.00 0.00 33.23 3.85
132 133 1.046204 AGTCCCGACCTCTTTTTCGT 58.954 50.000 0.00 0.00 33.23 3.85
133 134 2.165319 AAGTCCCGACCTCTTTTTCG 57.835 50.000 0.00 0.00 34.93 3.46
134 135 2.031069 GCAAAGTCCCGACCTCTTTTTC 60.031 50.000 0.00 0.00 30.41 2.29
135 136 1.954382 GCAAAGTCCCGACCTCTTTTT 59.046 47.619 0.00 0.00 30.41 1.94
136 137 1.133915 TGCAAAGTCCCGACCTCTTTT 60.134 47.619 0.00 0.00 30.41 2.27
137 138 0.472471 TGCAAAGTCCCGACCTCTTT 59.528 50.000 0.00 0.00 32.60 2.52
138 139 0.035458 CTGCAAAGTCCCGACCTCTT 59.965 55.000 0.00 0.00 0.00 2.85
139 140 1.674057 CTGCAAAGTCCCGACCTCT 59.326 57.895 0.00 0.00 0.00 3.69
140 141 2.035442 GCTGCAAAGTCCCGACCTC 61.035 63.158 0.00 0.00 0.00 3.85
141 142 2.032681 GCTGCAAAGTCCCGACCT 59.967 61.111 0.00 0.00 0.00 3.85
142 143 3.423154 CGCTGCAAAGTCCCGACC 61.423 66.667 0.00 0.00 0.00 4.79
143 144 2.665185 ACGCTGCAAAGTCCCGAC 60.665 61.111 0.00 0.00 0.00 4.79
144 145 2.357034 GACGCTGCAAAGTCCCGA 60.357 61.111 9.39 0.00 0.00 5.14
145 146 1.577328 ATTGACGCTGCAAAGTCCCG 61.577 55.000 15.82 2.79 36.61 5.14
146 147 0.598065 AATTGACGCTGCAAAGTCCC 59.402 50.000 15.82 0.00 36.61 4.46
147 148 2.422276 AAATTGACGCTGCAAAGTCC 57.578 45.000 15.82 2.61 36.61 3.85
148 149 2.097250 GCAAAATTGACGCTGCAAAGTC 60.097 45.455 12.71 12.71 37.85 3.01
149 150 1.860326 GCAAAATTGACGCTGCAAAGT 59.140 42.857 0.00 0.00 34.87 2.66
150 151 1.859703 TGCAAAATTGACGCTGCAAAG 59.140 42.857 0.00 0.00 41.61 2.77
151 152 1.592081 GTGCAAAATTGACGCTGCAAA 59.408 42.857 0.00 0.00 45.71 3.68
152 153 1.202394 AGTGCAAAATTGACGCTGCAA 60.202 42.857 0.00 0.00 45.71 4.08
153 154 0.385029 AGTGCAAAATTGACGCTGCA 59.615 45.000 0.00 0.00 42.28 4.41
154 155 1.055338 GAGTGCAAAATTGACGCTGC 58.945 50.000 0.00 0.00 35.32 5.25
155 156 1.267806 AGGAGTGCAAAATTGACGCTG 59.732 47.619 0.00 0.00 0.00 5.18
156 157 1.609208 AGGAGTGCAAAATTGACGCT 58.391 45.000 0.00 0.90 0.00 5.07
157 158 2.225491 TGTAGGAGTGCAAAATTGACGC 59.775 45.455 0.00 0.00 0.00 5.19
158 159 4.481930 TTGTAGGAGTGCAAAATTGACG 57.518 40.909 0.00 0.00 0.00 4.35
159 160 4.622740 GCATTGTAGGAGTGCAAAATTGAC 59.377 41.667 0.00 0.00 38.68 3.18
160 161 4.280425 TGCATTGTAGGAGTGCAAAATTGA 59.720 37.500 0.00 0.00 44.99 2.57
161 162 4.558178 TGCATTGTAGGAGTGCAAAATTG 58.442 39.130 0.00 0.00 44.99 2.32
162 163 4.870123 TGCATTGTAGGAGTGCAAAATT 57.130 36.364 0.00 0.00 44.99 1.82
167 168 1.202867 TGGTTGCATTGTAGGAGTGCA 60.203 47.619 0.00 0.00 46.15 4.57
168 169 1.470098 CTGGTTGCATTGTAGGAGTGC 59.530 52.381 0.00 0.00 39.26 4.40
169 170 2.485426 CACTGGTTGCATTGTAGGAGTG 59.515 50.000 0.00 0.00 0.00 3.51
170 171 2.553028 CCACTGGTTGCATTGTAGGAGT 60.553 50.000 0.00 0.00 0.00 3.85
171 172 2.086869 CCACTGGTTGCATTGTAGGAG 58.913 52.381 0.00 0.00 0.00 3.69
172 173 1.423541 ACCACTGGTTGCATTGTAGGA 59.576 47.619 0.00 0.00 27.29 2.94
173 174 1.812571 GACCACTGGTTGCATTGTAGG 59.187 52.381 1.13 0.00 35.25 3.18
174 175 1.464608 CGACCACTGGTTGCATTGTAG 59.535 52.381 1.13 0.00 35.25 2.74
175 176 1.518325 CGACCACTGGTTGCATTGTA 58.482 50.000 1.13 0.00 35.25 2.41
176 177 1.172180 CCGACCACTGGTTGCATTGT 61.172 55.000 9.80 0.00 35.25 2.71
177 178 1.580942 CCGACCACTGGTTGCATTG 59.419 57.895 9.80 0.00 35.25 2.82
178 179 1.603455 CCCGACCACTGGTTGCATT 60.603 57.895 9.80 0.00 35.25 3.56
179 180 2.034066 CCCGACCACTGGTTGCAT 59.966 61.111 9.80 0.00 35.25 3.96
180 181 4.947147 GCCCGACCACTGGTTGCA 62.947 66.667 9.80 0.00 35.25 4.08
182 183 4.263572 TGGCCCGACCACTGGTTG 62.264 66.667 8.40 8.40 46.36 3.77
198 199 6.642430 TGGATAGGAAGATTGCCAATTTTTG 58.358 36.000 0.00 0.00 0.00 2.44
199 200 6.669154 TCTGGATAGGAAGATTGCCAATTTTT 59.331 34.615 0.00 0.00 0.00 1.94
200 201 6.197168 TCTGGATAGGAAGATTGCCAATTTT 58.803 36.000 0.00 0.00 0.00 1.82
201 202 5.769835 TCTGGATAGGAAGATTGCCAATTT 58.230 37.500 0.00 0.00 0.00 1.82
202 203 5.103771 ACTCTGGATAGGAAGATTGCCAATT 60.104 40.000 0.00 0.00 0.00 2.32
203 204 4.414846 ACTCTGGATAGGAAGATTGCCAAT 59.585 41.667 0.00 0.00 0.00 3.16
204 205 3.782523 ACTCTGGATAGGAAGATTGCCAA 59.217 43.478 0.00 0.00 0.00 4.52
233 234 1.374252 CGGAACCCTGTCCTTGTCG 60.374 63.158 0.00 0.00 35.31 4.35
236 237 1.966451 GTGCGGAACCCTGTCCTTG 60.966 63.158 0.00 0.00 35.31 3.61
237 238 2.430367 GTGCGGAACCCTGTCCTT 59.570 61.111 0.00 0.00 35.31 3.36
238 239 3.637273 GGTGCGGAACCCTGTCCT 61.637 66.667 0.00 0.00 44.02 3.85
246 247 2.450609 TTTCTAGTGAGGTGCGGAAC 57.549 50.000 0.00 0.00 0.00 3.62
247 248 3.695830 ATTTTCTAGTGAGGTGCGGAA 57.304 42.857 0.00 0.00 0.00 4.30
248 249 3.007506 TGAATTTTCTAGTGAGGTGCGGA 59.992 43.478 0.00 0.00 0.00 5.54
249 250 3.334691 TGAATTTTCTAGTGAGGTGCGG 58.665 45.455 0.00 0.00 0.00 5.69
250 251 4.670221 GCTTGAATTTTCTAGTGAGGTGCG 60.670 45.833 4.20 0.00 33.49 5.34
251 252 4.670221 CGCTTGAATTTTCTAGTGAGGTGC 60.670 45.833 8.90 0.00 41.07 5.01
284 285 5.591643 ACGGCAATATTTTGTATAGCTCG 57.408 39.130 0.00 0.00 35.17 5.03
320 321 6.519679 AAAATGTCTTGAGCATGCTGATAA 57.480 33.333 28.27 15.85 0.00 1.75
324 325 4.855388 GTGTAAAATGTCTTGAGCATGCTG 59.145 41.667 28.27 11.47 0.00 4.41
394 400 9.382275 ACTTGTGCTTTTTGATGAATAAAACTT 57.618 25.926 0.00 0.00 0.00 2.66
395 401 8.947055 ACTTGTGCTTTTTGATGAATAAAACT 57.053 26.923 0.00 0.00 0.00 2.66
396 402 9.424659 CAACTTGTGCTTTTTGATGAATAAAAC 57.575 29.630 0.00 0.00 0.00 2.43
397 403 9.160496 ACAACTTGTGCTTTTTGATGAATAAAA 57.840 25.926 0.00 0.00 0.00 1.52
398 404 8.602328 CACAACTTGTGCTTTTTGATGAATAAA 58.398 29.630 8.97 0.00 41.89 1.40
399 405 7.224362 CCACAACTTGTGCTTTTTGATGAATAA 59.776 33.333 15.42 0.00 46.51 1.40
400 406 6.700960 CCACAACTTGTGCTTTTTGATGAATA 59.299 34.615 15.42 0.00 46.51 1.75
401 407 5.524646 CCACAACTTGTGCTTTTTGATGAAT 59.475 36.000 15.42 0.00 46.51 2.57
402 408 4.869297 CCACAACTTGTGCTTTTTGATGAA 59.131 37.500 15.42 0.00 46.51 2.57
403 409 4.431809 CCACAACTTGTGCTTTTTGATGA 58.568 39.130 15.42 0.00 46.51 2.92
404 410 3.556775 CCCACAACTTGTGCTTTTTGATG 59.443 43.478 15.42 0.28 46.51 3.07
405 411 3.450457 TCCCACAACTTGTGCTTTTTGAT 59.550 39.130 15.42 0.00 46.51 2.57
406 412 2.828520 TCCCACAACTTGTGCTTTTTGA 59.171 40.909 15.42 3.33 46.51 2.69
407 413 3.244033 TCCCACAACTTGTGCTTTTTG 57.756 42.857 15.42 2.21 46.51 2.44
408 414 3.795877 CATCCCACAACTTGTGCTTTTT 58.204 40.909 15.42 0.00 46.51 1.94
409 415 2.483538 GCATCCCACAACTTGTGCTTTT 60.484 45.455 15.42 0.00 46.51 2.27
410 416 1.069049 GCATCCCACAACTTGTGCTTT 59.931 47.619 15.42 0.61 46.51 3.51
411 417 0.675633 GCATCCCACAACTTGTGCTT 59.324 50.000 15.42 0.93 46.51 3.91
412 418 0.467844 TGCATCCCACAACTTGTGCT 60.468 50.000 15.42 1.09 46.51 4.40
413 419 0.038892 CTGCATCCCACAACTTGTGC 60.039 55.000 15.42 5.53 46.51 4.57
415 421 2.592102 ATCTGCATCCCACAACTTGT 57.408 45.000 0.00 0.00 0.00 3.16
416 422 2.159476 CGAATCTGCATCCCACAACTTG 60.159 50.000 0.00 0.00 0.00 3.16
417 423 2.086869 CGAATCTGCATCCCACAACTT 58.913 47.619 0.00 0.00 0.00 2.66
418 424 1.278985 TCGAATCTGCATCCCACAACT 59.721 47.619 0.00 0.00 0.00 3.16
419 425 1.737838 TCGAATCTGCATCCCACAAC 58.262 50.000 0.00 0.00 0.00 3.32
420 426 2.093021 TGATCGAATCTGCATCCCACAA 60.093 45.455 0.00 0.00 0.00 3.33
421 427 1.485895 TGATCGAATCTGCATCCCACA 59.514 47.619 0.00 0.00 0.00 4.17
422 428 2.245159 TGATCGAATCTGCATCCCAC 57.755 50.000 0.00 0.00 0.00 4.61
423 429 2.551504 CCATGATCGAATCTGCATCCCA 60.552 50.000 0.00 0.00 0.00 4.37
424 430 2.082231 CCATGATCGAATCTGCATCCC 58.918 52.381 0.00 0.00 0.00 3.85
425 431 2.082231 CCCATGATCGAATCTGCATCC 58.918 52.381 0.00 0.00 0.00 3.51
426 432 3.049708 TCCCATGATCGAATCTGCATC 57.950 47.619 0.00 0.00 0.00 3.91
427 433 3.715638 ATCCCATGATCGAATCTGCAT 57.284 42.857 0.00 0.00 0.00 3.96
428 434 3.143728 CAATCCCATGATCGAATCTGCA 58.856 45.455 0.00 0.00 0.00 4.41
429 435 3.188048 GTCAATCCCATGATCGAATCTGC 59.812 47.826 0.00 0.00 0.00 4.26
430 436 3.750130 GGTCAATCCCATGATCGAATCTG 59.250 47.826 0.00 0.00 0.00 2.90
431 437 3.392285 TGGTCAATCCCATGATCGAATCT 59.608 43.478 0.00 0.00 32.94 2.40
432 438 3.743521 TGGTCAATCCCATGATCGAATC 58.256 45.455 0.00 0.00 32.94 2.52
433 439 3.862877 TGGTCAATCCCATGATCGAAT 57.137 42.857 0.00 0.00 32.94 3.34
434 440 3.054434 ACTTGGTCAATCCCATGATCGAA 60.054 43.478 0.00 0.00 32.94 3.71
435 441 2.505407 ACTTGGTCAATCCCATGATCGA 59.495 45.455 0.00 0.00 32.94 3.59
436 442 2.874701 GACTTGGTCAATCCCATGATCG 59.125 50.000 0.00 0.00 32.94 3.69
437 443 3.629398 GTGACTTGGTCAATCCCATGATC 59.371 47.826 1.77 0.00 44.49 2.92
438 444 3.010472 TGTGACTTGGTCAATCCCATGAT 59.990 43.478 1.77 0.00 44.49 2.45
439 445 2.374839 TGTGACTTGGTCAATCCCATGA 59.625 45.455 1.77 0.00 44.49 3.07
440 446 2.751259 CTGTGACTTGGTCAATCCCATG 59.249 50.000 1.77 0.00 44.49 3.66
441 447 2.644299 TCTGTGACTTGGTCAATCCCAT 59.356 45.455 1.77 0.00 44.49 4.00
442 448 2.054021 TCTGTGACTTGGTCAATCCCA 58.946 47.619 1.77 0.00 44.49 4.37
443 449 2.859165 TCTGTGACTTGGTCAATCCC 57.141 50.000 1.77 0.00 44.49 3.85
444 450 3.012518 CCATCTGTGACTTGGTCAATCC 58.987 50.000 1.77 0.00 44.49 3.01
445 451 3.679389 ACCATCTGTGACTTGGTCAATC 58.321 45.455 1.77 0.00 44.49 2.67
446 452 3.795688 ACCATCTGTGACTTGGTCAAT 57.204 42.857 1.77 0.00 44.49 2.57
447 453 5.966829 AGACACCATCTGTGACTTGGTCAA 61.967 45.833 1.77 0.00 45.68 3.18
448 454 4.514768 AGACACCATCTGTGACTTGGTCA 61.515 47.826 0.00 0.00 45.68 4.02
449 455 2.037772 AGACACCATCTGTGACTTGGTC 59.962 50.000 0.00 0.00 45.68 4.02
450 456 2.050144 AGACACCATCTGTGACTTGGT 58.950 47.619 0.00 0.64 45.68 3.67
451 457 2.847327 AGACACCATCTGTGACTTGG 57.153 50.000 0.00 0.00 45.68 3.61
458 464 2.317371 AGGTCTGAGACACCATCTGT 57.683 50.000 15.33 0.00 38.00 3.41
459 465 2.100584 GCTAGGTCTGAGACACCATCTG 59.899 54.545 15.33 0.00 38.00 2.90
460 466 2.383855 GCTAGGTCTGAGACACCATCT 58.616 52.381 15.33 4.32 41.91 2.90
461 467 1.066303 CGCTAGGTCTGAGACACCATC 59.934 57.143 15.33 0.00 36.23 3.51
462 468 1.107114 CGCTAGGTCTGAGACACCAT 58.893 55.000 15.33 0.00 36.23 3.55
463 469 0.037734 TCGCTAGGTCTGAGACACCA 59.962 55.000 15.33 0.00 36.23 4.17
464 470 0.452585 GTCGCTAGGTCTGAGACACC 59.547 60.000 15.33 0.00 35.01 4.16
465 471 1.131504 CTGTCGCTAGGTCTGAGACAC 59.868 57.143 15.33 3.29 38.82 3.67
466 472 1.003233 TCTGTCGCTAGGTCTGAGACA 59.997 52.381 15.33 0.00 40.76 3.41
467 473 1.668751 CTCTGTCGCTAGGTCTGAGAC 59.331 57.143 3.47 3.47 35.36 3.36
468 474 1.555533 TCTCTGTCGCTAGGTCTGAGA 59.444 52.381 0.00 2.17 35.15 3.27
469 475 2.031258 TCTCTGTCGCTAGGTCTGAG 57.969 55.000 0.00 0.00 0.00 3.35
470 476 2.491675 TTCTCTGTCGCTAGGTCTGA 57.508 50.000 0.00 0.00 0.00 3.27
471 477 2.797792 GCATTCTCTGTCGCTAGGTCTG 60.798 54.545 0.00 0.00 0.00 3.51
472 478 1.407258 GCATTCTCTGTCGCTAGGTCT 59.593 52.381 0.00 0.00 0.00 3.85
473 479 1.407258 AGCATTCTCTGTCGCTAGGTC 59.593 52.381 0.00 0.00 31.60 3.85
474 480 1.479709 AGCATTCTCTGTCGCTAGGT 58.520 50.000 0.00 0.00 31.60 3.08
475 481 2.200067 CAAGCATTCTCTGTCGCTAGG 58.800 52.381 0.00 0.00 33.45 3.02
476 482 2.200067 CCAAGCATTCTCTGTCGCTAG 58.800 52.381 0.00 0.00 33.45 3.42
477 483 1.740380 GCCAAGCATTCTCTGTCGCTA 60.740 52.381 0.00 0.00 33.45 4.26
478 484 1.023513 GCCAAGCATTCTCTGTCGCT 61.024 55.000 0.00 0.00 35.90 4.93
479 485 1.427020 GCCAAGCATTCTCTGTCGC 59.573 57.895 0.00 0.00 0.00 5.19
480 486 0.674581 TGGCCAAGCATTCTCTGTCG 60.675 55.000 0.61 0.00 0.00 4.35
481 487 1.200948 GTTGGCCAAGCATTCTCTGTC 59.799 52.381 21.21 0.00 0.00 3.51
482 488 1.202976 AGTTGGCCAAGCATTCTCTGT 60.203 47.619 21.21 0.00 0.00 3.41
483 489 1.542492 AGTTGGCCAAGCATTCTCTG 58.458 50.000 21.21 0.00 0.00 3.35
484 490 2.299326 AAGTTGGCCAAGCATTCTCT 57.701 45.000 21.21 7.64 0.00 3.10
485 491 3.445096 ACATAAGTTGGCCAAGCATTCTC 59.555 43.478 21.21 4.99 0.00 2.87
486 492 3.194116 CACATAAGTTGGCCAAGCATTCT 59.806 43.478 21.21 9.32 0.00 2.40
487 493 3.514645 CACATAAGTTGGCCAAGCATTC 58.485 45.455 21.21 6.68 0.00 2.67
488 494 2.354003 GCACATAAGTTGGCCAAGCATT 60.354 45.455 21.21 16.35 0.00 3.56
489 495 1.205417 GCACATAAGTTGGCCAAGCAT 59.795 47.619 21.21 10.67 0.00 3.79
490 496 0.602562 GCACATAAGTTGGCCAAGCA 59.397 50.000 21.21 7.29 0.00 3.91
491 497 0.108662 GGCACATAAGTTGGCCAAGC 60.109 55.000 21.21 16.69 39.87 4.01
492 498 1.474077 GAGGCACATAAGTTGGCCAAG 59.526 52.381 21.21 9.50 41.53 3.61
493 499 1.075374 AGAGGCACATAAGTTGGCCAA 59.925 47.619 16.05 16.05 41.53 4.52
494 500 0.698238 AGAGGCACATAAGTTGGCCA 59.302 50.000 0.00 0.00 41.53 5.36
495 501 2.710096 TAGAGGCACATAAGTTGGCC 57.290 50.000 0.00 0.00 40.21 5.36
496 502 3.545703 ACATAGAGGCACATAAGTTGGC 58.454 45.455 0.00 0.00 0.00 4.52
497 503 5.065218 GTGAACATAGAGGCACATAAGTTGG 59.935 44.000 0.00 0.00 0.00 3.77
498 504 5.643348 TGTGAACATAGAGGCACATAAGTTG 59.357 40.000 0.00 0.00 36.44 3.16
572 578 7.232534 GTCCAGAGGTCATTATTAGTGAGATCT 59.767 40.741 0.00 0.00 0.00 2.75
595 612 5.560183 CGTCTTGGACATAAACAACAAGTCC 60.560 44.000 0.00 0.00 46.86 3.85
605 622 2.736144 AGCGTCGTCTTGGACATAAA 57.264 45.000 0.00 0.00 36.73 1.40
695 713 2.435805 TCCGATGGATCTGGGAGAAAAG 59.564 50.000 0.00 0.00 0.00 2.27
803 823 5.077564 TCAGAAGGAGAGCACTGTTTAGTA 58.922 41.667 0.00 0.00 34.74 1.82
892 931 1.135689 GTGCTTTCGCCATTGTGGTAG 60.136 52.381 0.00 0.00 40.46 3.18
895 934 1.080569 GGTGCTTTCGCCATTGTGG 60.081 57.895 0.00 0.00 42.42 4.17
905 944 1.127397 GTTTAGTACGGCGGTGCTTTC 59.873 52.381 19.38 7.66 39.90 2.62
1277 1379 3.288484 TCGCAAGCGATCTGGTCT 58.712 55.556 13.74 0.00 44.01 3.85
1416 3565 3.692406 GACTCGACCCAGGCCGTT 61.692 66.667 0.00 0.00 0.00 4.44
1443 3592 1.226603 GTAGTACAGCTCGCCCACG 60.227 63.158 0.00 0.00 42.01 4.94
1640 3789 0.740868 CACGTCATCGCCCATTGAGT 60.741 55.000 0.00 0.00 41.18 3.41
1653 3802 1.080093 GATCGCCCAGAACACGTCA 60.080 57.895 0.00 0.00 0.00 4.35
2025 4174 2.523168 TCCACCGTGCTCAGACCA 60.523 61.111 0.00 0.00 0.00 4.02
2209 4358 2.624169 GCGTCTCGGCTCTCTCTAT 58.376 57.895 0.00 0.00 0.00 1.98
2482 4631 0.809385 TTCTCTCCGAAGTACGCCTG 59.191 55.000 0.00 0.00 41.07 4.85
2595 4744 5.696260 TTTCGCAAACATATGTCTACTCG 57.304 39.130 9.23 8.83 0.00 4.18
2646 4796 8.729805 AATCTAGACTCTGCCAAGAATTAAAG 57.270 34.615 0.00 0.00 30.03 1.85
2647 4797 8.950210 CAAATCTAGACTCTGCCAAGAATTAAA 58.050 33.333 0.00 0.00 30.03 1.52
2649 4799 7.851228 TCAAATCTAGACTCTGCCAAGAATTA 58.149 34.615 0.00 0.00 30.03 1.40
2651 4801 6.305272 TCAAATCTAGACTCTGCCAAGAAT 57.695 37.500 0.00 0.00 30.03 2.40
2657 4807 3.645687 AGGGATCAAATCTAGACTCTGCC 59.354 47.826 0.00 0.00 0.00 4.85
2660 4810 9.890915 ATAGTTAAGGGATCAAATCTAGACTCT 57.109 33.333 0.00 0.00 0.00 3.24
2680 4830 6.650390 GTGAAGGTTGTCCGGTTTTATAGTTA 59.350 38.462 0.00 0.00 39.05 2.24
2686 4836 2.092538 TGGTGAAGGTTGTCCGGTTTTA 60.093 45.455 0.00 0.00 39.05 1.52
2687 4837 1.341187 TGGTGAAGGTTGTCCGGTTTT 60.341 47.619 0.00 0.00 39.05 2.43
2702 4852 4.136796 CTGATTTCAAGAGTTGGTGGTGA 58.863 43.478 0.00 0.00 0.00 4.02
2705 4855 6.656693 ACTTATCTGATTTCAAGAGTTGGTGG 59.343 38.462 5.82 0.00 0.00 4.61
2740 4890 3.072330 TGGATACTGCTTTGGTTGAGTCA 59.928 43.478 0.00 0.00 37.61 3.41
2755 4905 4.449131 CATGTTGAGTCAGCATGGATACT 58.551 43.478 31.51 6.62 45.05 2.12
2786 4936 2.905996 GCCACCTGGACATGACCCA 61.906 63.158 11.80 10.96 37.39 4.51
2797 4947 3.941483 AGAAACAGAAATATCGCCACCTG 59.059 43.478 0.00 0.00 0.00 4.00
2801 4951 6.567687 TGAAAAGAAACAGAAATATCGCCA 57.432 33.333 0.00 0.00 0.00 5.69
2851 5001 3.866910 CAGCAATTGCAAGTCAACTGTTT 59.133 39.130 30.89 3.64 45.16 2.83
2867 5017 1.100463 TTGTGTCACGGTGCAGCAAT 61.100 50.000 17.33 0.00 0.00 3.56
2872 5022 2.892914 CGGTTGTGTCACGGTGCA 60.893 61.111 2.51 2.17 0.00 4.57
2873 5023 2.586635 TCGGTTGTGTCACGGTGC 60.587 61.111 2.51 0.00 0.00 5.01
2874 5024 2.594962 GCTCGGTTGTGTCACGGTG 61.595 63.158 0.56 0.56 0.00 4.94
2875 5025 2.279918 GCTCGGTTGTGTCACGGT 60.280 61.111 0.00 0.00 0.00 4.83
2876 5026 3.403057 CGCTCGGTTGTGTCACGG 61.403 66.667 0.00 0.00 0.00 4.94
2878 5028 2.928361 CACGCTCGGTTGTGTCAC 59.072 61.111 0.00 0.00 0.00 3.67
2879 5029 2.964925 GCACGCTCGGTTGTGTCA 60.965 61.111 0.00 0.00 38.36 3.58
2880 5030 3.712881 GGCACGCTCGGTTGTGTC 61.713 66.667 0.00 0.00 38.36 3.67
2907 5064 3.670637 GACTGATGGCGCTGGCTCA 62.671 63.158 7.64 4.50 39.81 4.26
2926 5083 1.225799 GCTCGTCGACTGACTCGTC 60.226 63.158 14.70 0.00 43.21 4.20
2928 5085 2.098680 GGCTCGTCGACTGACTCG 59.901 66.667 14.70 0.00 43.21 4.18
2930 5087 1.286260 GTTGGCTCGTCGACTGACT 59.714 57.895 14.70 0.00 43.21 3.41
2932 5089 1.007734 GTGTTGGCTCGTCGACTGA 60.008 57.895 14.70 11.50 0.00 3.41
2933 5090 1.007271 AGTGTTGGCTCGTCGACTG 60.007 57.895 14.70 7.51 0.00 3.51
2934 5091 1.007271 CAGTGTTGGCTCGTCGACT 60.007 57.895 14.70 0.00 0.00 4.18
2937 5094 1.557443 GGAACAGTGTTGGCTCGTCG 61.557 60.000 14.57 0.00 0.00 5.12
2938 5095 1.228657 GGGAACAGTGTTGGCTCGTC 61.229 60.000 14.57 0.00 0.00 4.20
2939 5096 1.227853 GGGAACAGTGTTGGCTCGT 60.228 57.895 14.57 0.00 0.00 4.18
2940 5097 1.966451 GGGGAACAGTGTTGGCTCG 60.966 63.158 14.57 0.00 0.00 5.03
2941 5098 1.150536 TGGGGAACAGTGTTGGCTC 59.849 57.895 14.57 0.00 0.00 4.70
2942 5099 1.152756 GTGGGGAACAGTGTTGGCT 60.153 57.895 14.57 0.00 0.00 4.75
2943 5100 2.200337 GGTGGGGAACAGTGTTGGC 61.200 63.158 14.57 0.00 0.00 4.52
2944 5101 1.896660 CGGTGGGGAACAGTGTTGG 60.897 63.158 14.57 0.00 0.00 3.77
2946 5103 0.179029 CTTCGGTGGGGAACAGTGTT 60.179 55.000 8.61 8.61 0.00 3.32
2949 5106 3.157680 CCTTCGGTGGGGAACAGT 58.842 61.111 0.00 0.00 0.00 3.55
2951 5108 2.852075 AGCCTTCGGTGGGGAACA 60.852 61.111 0.00 0.00 0.00 3.18
2952 5109 2.046217 GAGCCTTCGGTGGGGAAC 60.046 66.667 0.00 0.00 0.00 3.62
2953 5110 1.910580 GATGAGCCTTCGGTGGGGAA 61.911 60.000 0.00 0.00 0.00 3.97
2957 5241 2.190578 GGGATGAGCCTTCGGTGG 59.809 66.667 0.00 0.00 36.66 4.61
2961 5245 4.918201 GCCGGGGATGAGCCTTCG 62.918 72.222 2.18 0.00 36.66 3.79
2989 5273 0.604578 CACGGACGGTTAAGGAGGAA 59.395 55.000 0.00 0.00 0.00 3.36
3018 5302 1.176619 TGTCTTCAGGCGTCCGAAGA 61.177 55.000 11.58 11.58 39.15 2.87
3021 5305 2.649034 GTGTCTTCAGGCGTCCGA 59.351 61.111 0.00 0.00 0.00 4.55
3065 5359 2.690778 GGTCGTGGTGGATGCTTGC 61.691 63.158 0.00 0.00 0.00 4.01
3446 5740 2.230864 GTATTTCGTGTTGCTCAACGC 58.769 47.619 14.37 14.37 45.50 4.84
3447 5741 3.513462 TGTATTTCGTGTTGCTCAACG 57.487 42.857 8.07 0.00 43.94 4.10
3448 5742 4.616802 CCATTGTATTTCGTGTTGCTCAAC 59.383 41.667 5.84 5.84 41.50 3.18
3449 5743 4.320861 CCCATTGTATTTCGTGTTGCTCAA 60.321 41.667 0.00 0.00 0.00 3.02
3450 5744 3.190327 CCCATTGTATTTCGTGTTGCTCA 59.810 43.478 0.00 0.00 0.00 4.26
3451 5745 3.438781 TCCCATTGTATTTCGTGTTGCTC 59.561 43.478 0.00 0.00 0.00 4.26
3452 5746 3.417101 TCCCATTGTATTTCGTGTTGCT 58.583 40.909 0.00 0.00 0.00 3.91
3453 5747 3.427503 CCTCCCATTGTATTTCGTGTTGC 60.428 47.826 0.00 0.00 0.00 4.17
3454 5748 3.128589 CCCTCCCATTGTATTTCGTGTTG 59.871 47.826 0.00 0.00 0.00 3.33
3455 5749 3.009695 TCCCTCCCATTGTATTTCGTGTT 59.990 43.478 0.00 0.00 0.00 3.32
3456 5750 2.574369 TCCCTCCCATTGTATTTCGTGT 59.426 45.455 0.00 0.00 0.00 4.49
3457 5751 3.275617 TCCCTCCCATTGTATTTCGTG 57.724 47.619 0.00 0.00 0.00 4.35
3458 5752 3.435026 CCATCCCTCCCATTGTATTTCGT 60.435 47.826 0.00 0.00 0.00 3.85
3459 5753 3.149196 CCATCCCTCCCATTGTATTTCG 58.851 50.000 0.00 0.00 0.00 3.46
3460 5754 4.401925 CTCCATCCCTCCCATTGTATTTC 58.598 47.826 0.00 0.00 0.00 2.17
3461 5755 3.140895 CCTCCATCCCTCCCATTGTATTT 59.859 47.826 0.00 0.00 0.00 1.40
3462 5756 2.718609 CCTCCATCCCTCCCATTGTATT 59.281 50.000 0.00 0.00 0.00 1.89
3463 5757 2.352371 CCTCCATCCCTCCCATTGTAT 58.648 52.381 0.00 0.00 0.00 2.29
3464 5758 1.010793 ACCTCCATCCCTCCCATTGTA 59.989 52.381 0.00 0.00 0.00 2.41
3465 5759 0.253820 ACCTCCATCCCTCCCATTGT 60.254 55.000 0.00 0.00 0.00 2.71
3466 5760 0.929244 AACCTCCATCCCTCCCATTG 59.071 55.000 0.00 0.00 0.00 2.82
3467 5761 1.226311 GAACCTCCATCCCTCCCATT 58.774 55.000 0.00 0.00 0.00 3.16
3468 5762 1.056700 CGAACCTCCATCCCTCCCAT 61.057 60.000 0.00 0.00 0.00 4.00
3469 5763 1.689233 CGAACCTCCATCCCTCCCA 60.689 63.158 0.00 0.00 0.00 4.37
3470 5764 2.444256 CCGAACCTCCATCCCTCCC 61.444 68.421 0.00 0.00 0.00 4.30
3471 5765 2.444256 CCCGAACCTCCATCCCTCC 61.444 68.421 0.00 0.00 0.00 4.30
3472 5766 3.108288 GCCCGAACCTCCATCCCTC 62.108 68.421 0.00 0.00 0.00 4.30
3473 5767 3.090532 GCCCGAACCTCCATCCCT 61.091 66.667 0.00 0.00 0.00 4.20
3474 5768 3.090532 AGCCCGAACCTCCATCCC 61.091 66.667 0.00 0.00 0.00 3.85
3475 5769 2.190578 CAGCCCGAACCTCCATCC 59.809 66.667 0.00 0.00 0.00 3.51
3476 5770 2.514824 GCAGCCCGAACCTCCATC 60.515 66.667 0.00 0.00 0.00 3.51
3477 5771 4.473520 CGCAGCCCGAACCTCCAT 62.474 66.667 0.00 0.00 40.02 3.41
3519 5813 3.114616 CTCGCCCACAAGCTCACG 61.115 66.667 0.00 0.00 0.00 4.35
3520 5814 2.031163 ACTCGCCCACAAGCTCAC 59.969 61.111 0.00 0.00 0.00 3.51
3521 5815 2.031012 CACTCGCCCACAAGCTCA 59.969 61.111 0.00 0.00 0.00 4.26
3522 5816 2.743928 CCACTCGCCCACAAGCTC 60.744 66.667 0.00 0.00 0.00 4.09
3523 5817 3.560251 ACCACTCGCCCACAAGCT 61.560 61.111 0.00 0.00 0.00 3.74
3524 5818 3.357079 CACCACTCGCCCACAAGC 61.357 66.667 0.00 0.00 0.00 4.01
3525 5819 3.357079 GCACCACTCGCCCACAAG 61.357 66.667 0.00 0.00 0.00 3.16
3534 5828 4.083862 GACCTCCCCGCACCACTC 62.084 72.222 0.00 0.00 0.00 3.51
3535 5829 4.954118 TGACCTCCCCGCACCACT 62.954 66.667 0.00 0.00 0.00 4.00
3536 5830 4.394712 CTGACCTCCCCGCACCAC 62.395 72.222 0.00 0.00 0.00 4.16
3537 5831 2.815684 ATACTGACCTCCCCGCACCA 62.816 60.000 0.00 0.00 0.00 4.17
3538 5832 1.623542 AATACTGACCTCCCCGCACC 61.624 60.000 0.00 0.00 0.00 5.01
3539 5833 0.462047 CAATACTGACCTCCCCGCAC 60.462 60.000 0.00 0.00 0.00 5.34
3540 5834 1.622607 CCAATACTGACCTCCCCGCA 61.623 60.000 0.00 0.00 0.00 5.69
3541 5835 1.146263 CCAATACTGACCTCCCCGC 59.854 63.158 0.00 0.00 0.00 6.13
3542 5836 1.696097 CCCCAATACTGACCTCCCCG 61.696 65.000 0.00 0.00 0.00 5.73
3543 5837 0.327191 TCCCCAATACTGACCTCCCC 60.327 60.000 0.00 0.00 0.00 4.81
3544 5838 1.591768 TTCCCCAATACTGACCTCCC 58.408 55.000 0.00 0.00 0.00 4.30
3545 5839 2.509964 ACATTCCCCAATACTGACCTCC 59.490 50.000 0.00 0.00 0.00 4.30
3546 5840 3.933861 ACATTCCCCAATACTGACCTC 57.066 47.619 0.00 0.00 0.00 3.85
3547 5841 3.136626 GCTACATTCCCCAATACTGACCT 59.863 47.826 0.00 0.00 0.00 3.85
3548 5842 3.118038 TGCTACATTCCCCAATACTGACC 60.118 47.826 0.00 0.00 0.00 4.02
3549 5843 4.130118 CTGCTACATTCCCCAATACTGAC 58.870 47.826 0.00 0.00 0.00 3.51
3550 5844 4.037222 TCTGCTACATTCCCCAATACTGA 58.963 43.478 0.00 0.00 0.00 3.41
3551 5845 4.422073 TCTGCTACATTCCCCAATACTG 57.578 45.455 0.00 0.00 0.00 2.74
3552 5846 5.450818 TTTCTGCTACATTCCCCAATACT 57.549 39.130 0.00 0.00 0.00 2.12
3553 5847 6.321181 TGAATTTCTGCTACATTCCCCAATAC 59.679 38.462 0.00 0.00 0.00 1.89
3554 5848 6.430864 TGAATTTCTGCTACATTCCCCAATA 58.569 36.000 0.00 0.00 0.00 1.90
3555 5849 5.271598 TGAATTTCTGCTACATTCCCCAAT 58.728 37.500 0.00 0.00 0.00 3.16
3556 5850 4.671831 TGAATTTCTGCTACATTCCCCAA 58.328 39.130 0.00 0.00 0.00 4.12
3557 5851 4.314522 TGAATTTCTGCTACATTCCCCA 57.685 40.909 0.00 0.00 0.00 4.96
3558 5852 5.659440 TTTGAATTTCTGCTACATTCCCC 57.341 39.130 0.00 0.00 0.00 4.81
3559 5853 8.552083 AAATTTTGAATTTCTGCTACATTCCC 57.448 30.769 0.00 0.00 0.00 3.97
3560 5854 8.659491 GGAAATTTTGAATTTCTGCTACATTCC 58.341 33.333 19.63 0.00 37.94 3.01
3561 5855 8.659491 GGGAAATTTTGAATTTCTGCTACATTC 58.341 33.333 19.63 5.80 37.94 2.67
3562 5856 8.377799 AGGGAAATTTTGAATTTCTGCTACATT 58.622 29.630 19.63 0.95 37.94 2.71
3563 5857 7.910584 AGGGAAATTTTGAATTTCTGCTACAT 58.089 30.769 19.63 4.35 37.94 2.29
3564 5858 7.301868 AGGGAAATTTTGAATTTCTGCTACA 57.698 32.000 19.63 0.00 37.94 2.74
3565 5859 7.484959 CGTAGGGAAATTTTGAATTTCTGCTAC 59.515 37.037 19.63 7.85 37.94 3.58
3566 5860 7.175990 ACGTAGGGAAATTTTGAATTTCTGCTA 59.824 33.333 19.63 3.66 37.94 3.49
3567 5861 6.015434 ACGTAGGGAAATTTTGAATTTCTGCT 60.015 34.615 19.63 4.30 37.94 4.24
3568 5862 6.089417 CACGTAGGGAAATTTTGAATTTCTGC 59.911 38.462 19.63 8.89 37.94 4.26
3569 5863 7.145323 ACACGTAGGGAAATTTTGAATTTCTG 58.855 34.615 19.63 13.62 37.94 3.02
3570 5864 7.013846 TGACACGTAGGGAAATTTTGAATTTCT 59.986 33.333 19.63 8.67 37.94 2.52
3571 5865 7.114388 GTGACACGTAGGGAAATTTTGAATTTC 59.886 37.037 14.63 14.63 37.31 2.17
3572 5866 6.921307 GTGACACGTAGGGAAATTTTGAATTT 59.079 34.615 0.00 0.00 0.00 1.82
3573 5867 6.443792 GTGACACGTAGGGAAATTTTGAATT 58.556 36.000 0.00 0.00 0.00 2.17
3574 5868 5.048294 GGTGACACGTAGGGAAATTTTGAAT 60.048 40.000 0.00 0.00 0.00 2.57
3575 5869 4.276431 GGTGACACGTAGGGAAATTTTGAA 59.724 41.667 0.00 0.00 0.00 2.69
3576 5870 3.816523 GGTGACACGTAGGGAAATTTTGA 59.183 43.478 0.00 0.00 0.00 2.69
3577 5871 3.566322 TGGTGACACGTAGGGAAATTTTG 59.434 43.478 0.00 0.00 33.40 2.44
3578 5872 3.822940 TGGTGACACGTAGGGAAATTTT 58.177 40.909 0.00 0.00 33.40 1.82
3579 5873 3.495434 TGGTGACACGTAGGGAAATTT 57.505 42.857 0.00 0.00 33.40 1.82
3580 5874 3.408634 CTTGGTGACACGTAGGGAAATT 58.591 45.455 0.00 0.00 42.67 1.82
3581 5875 3.053831 CTTGGTGACACGTAGGGAAAT 57.946 47.619 0.00 0.00 42.67 2.17
3582 5876 2.536761 CTTGGTGACACGTAGGGAAA 57.463 50.000 0.00 0.00 42.67 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.