Multiple sequence alignment - TraesCS3B01G405000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G405000 chr3B 100.000 4890 0 0 1 4890 640654929 640659818 0.000000e+00 9031.0
1 TraesCS3B01G405000 chr3B 85.851 417 59 0 4462 4878 641653974 641654390 1.250000e-120 444.0
2 TraesCS3B01G405000 chr3B 86.173 405 56 0 4466 4870 640664572 640664976 5.810000e-119 438.0
3 TraesCS3B01G405000 chr3B 84.841 409 62 0 4462 4870 640832254 640832662 3.520000e-111 412.0
4 TraesCS3B01G405000 chr3B 92.188 128 9 1 3352 3478 640658147 640658274 3.890000e-41 180.0
5 TraesCS3B01G405000 chr3B 92.188 128 9 1 3219 3346 640658280 640658406 3.890000e-41 180.0
6 TraesCS3B01G405000 chr3A 90.730 2287 160 27 512 2758 623186734 623189008 0.000000e+00 3001.0
7 TraesCS3B01G405000 chr3A 92.686 916 50 9 3352 4258 623189544 623190451 0.000000e+00 1304.0
8 TraesCS3B01G405000 chr3A 91.779 596 38 6 2757 3351 623189091 623189676 0.000000e+00 819.0
9 TraesCS3B01G405000 chr3A 95.010 501 25 0 4390 4890 623190560 623191060 0.000000e+00 787.0
10 TraesCS3B01G405000 chr3A 86.331 417 57 0 4462 4878 623605112 623605528 5.770000e-124 455.0
11 TraesCS3B01G405000 chr3A 85.575 409 59 0 4462 4870 623197005 623197413 3.500000e-116 429.0
12 TraesCS3B01G405000 chr3A 85.575 409 59 0 4462 4870 623200410 623200818 3.500000e-116 429.0
13 TraesCS3B01G405000 chr3A 83.099 71 8 3 4255 4325 623190471 623190537 1.470000e-05 62.1
14 TraesCS3B01G405000 chr3D 86.300 1489 123 31 275 1704 480116481 480117947 0.000000e+00 1544.0
15 TraesCS3B01G405000 chr3D 92.816 877 41 6 3354 4227 480119502 480120359 0.000000e+00 1251.0
16 TraesCS3B01G405000 chr3D 92.950 539 28 6 4352 4890 480120445 480120973 0.000000e+00 776.0
17 TraesCS3B01G405000 chr3D 94.776 402 21 0 1743 2144 480117944 480118345 1.160000e-175 627.0
18 TraesCS3B01G405000 chr3D 86.154 585 66 5 2169 2747 480118457 480119032 6.950000e-173 617.0
19 TraesCS3B01G405000 chr3D 86.331 417 57 0 4462 4878 480837016 480837432 5.770000e-124 455.0
20 TraesCS3B01G405000 chr3D 86.466 266 29 2 2748 3013 480119122 480119380 8.010000e-73 285.0
21 TraesCS3B01G405000 chr3D 80.669 269 29 11 3083 3351 480119386 480119631 2.320000e-43 187.0
22 TraesCS3B01G405000 chr7A 91.803 122 7 2 2860 2978 580480949 580480828 3.030000e-37 167.0
23 TraesCS3B01G405000 chr7D 86.395 147 17 3 2860 3004 509571436 509571291 1.820000e-34 158.0
24 TraesCS3B01G405000 chr7B 86.395 147 15 4 2859 3004 537732455 537732313 6.550000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G405000 chr3B 640654929 640659818 4889 False 3130.333333 9031 94.792000 1 4890 3 chr3B.!!$F4 4889
1 TraesCS3B01G405000 chr3A 623186734 623191060 4326 False 1194.620000 3001 90.660800 512 4890 5 chr3A.!!$F2 4378
2 TraesCS3B01G405000 chr3A 623197005 623200818 3813 False 429.000000 429 85.575000 4462 4870 2 chr3A.!!$F3 408
3 TraesCS3B01G405000 chr3D 480116481 480120973 4492 False 755.285714 1544 88.590143 275 4890 7 chr3D.!!$F2 4615

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 179 0.029681 ATGGCCTCCCTCCAGTATGT 60.030 55.0 3.32 0.0 36.98 2.29 F
1024 1105 0.179169 GTACGGACACGCTTCTCCTC 60.179 60.0 0.00 0.0 46.04 3.71 F
1238 1319 0.039256 TGCTTCGCATCTTTGGTTGC 60.039 50.0 0.00 0.0 31.71 4.17 F
1427 1510 0.107654 GCCACGCTGTCCCTAGAAAT 60.108 55.0 0.00 0.0 0.00 2.17 F
2780 3065 0.664761 TCTTTGCTGTCTGCTTGTGC 59.335 50.0 3.20 0.0 43.37 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1028 1109 0.531090 ACACGCAGCTACGGTTTGAA 60.531 50.000 11.74 0.00 37.37 2.69 R
1825 1912 3.616956 TGGAGGAATCAGCAGTTAGTG 57.383 47.619 0.00 0.00 0.00 2.74 R
3073 3364 1.363807 GTCTTGCCACAAACCCAGC 59.636 57.895 0.00 0.00 0.00 4.85 R
3243 3534 0.946528 TGCCTCATTGCATCATACGC 59.053 50.000 0.00 0.00 36.04 4.42 R
4436 4770 0.030369 CTAGTGACGATGGGGTACGC 59.970 60.000 0.29 0.29 43.69 4.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 9.016623 GTTACATTCAAAGAATTTATTACGGGC 57.983 33.333 0.00 0.00 35.03 6.13
76 77 6.569780 ACATTCAAAGAATTTATTACGGGCC 58.430 36.000 0.00 0.00 35.03 5.80
77 78 6.379988 ACATTCAAAGAATTTATTACGGGCCT 59.620 34.615 0.84 0.00 35.03 5.19
78 79 7.558444 ACATTCAAAGAATTTATTACGGGCCTA 59.442 33.333 0.84 0.00 35.03 3.93
79 80 6.930667 TCAAAGAATTTATTACGGGCCTAC 57.069 37.500 0.84 0.00 35.03 3.18
80 81 6.416415 TCAAAGAATTTATTACGGGCCTACA 58.584 36.000 0.84 0.00 35.03 2.74
81 82 7.057894 TCAAAGAATTTATTACGGGCCTACAT 58.942 34.615 0.84 0.00 35.03 2.29
82 83 7.227910 TCAAAGAATTTATTACGGGCCTACATC 59.772 37.037 0.84 0.00 35.03 3.06
83 84 6.435292 AGAATTTATTACGGGCCTACATCT 57.565 37.500 0.84 0.00 0.00 2.90
84 85 6.465084 AGAATTTATTACGGGCCTACATCTC 58.535 40.000 0.84 0.00 0.00 2.75
85 86 5.818678 ATTTATTACGGGCCTACATCTCA 57.181 39.130 0.84 0.00 0.00 3.27
86 87 5.617528 TTTATTACGGGCCTACATCTCAA 57.382 39.130 0.84 0.00 0.00 3.02
87 88 5.617528 TTATTACGGGCCTACATCTCAAA 57.382 39.130 0.84 0.00 0.00 2.69
88 89 3.985019 TTACGGGCCTACATCTCAAAA 57.015 42.857 0.84 0.00 0.00 2.44
89 90 4.497291 TTACGGGCCTACATCTCAAAAT 57.503 40.909 0.84 0.00 0.00 1.82
90 91 3.366052 ACGGGCCTACATCTCAAAATT 57.634 42.857 0.84 0.00 0.00 1.82
91 92 4.497291 ACGGGCCTACATCTCAAAATTA 57.503 40.909 0.84 0.00 0.00 1.40
92 93 5.048846 ACGGGCCTACATCTCAAAATTAT 57.951 39.130 0.84 0.00 0.00 1.28
93 94 4.821805 ACGGGCCTACATCTCAAAATTATG 59.178 41.667 0.84 0.00 0.00 1.90
94 95 4.216257 CGGGCCTACATCTCAAAATTATGG 59.784 45.833 0.84 0.00 0.00 2.74
95 96 4.021981 GGGCCTACATCTCAAAATTATGGC 60.022 45.833 0.84 0.00 36.27 4.40
96 97 5.126396 GCCTACATCTCAAAATTATGGCC 57.874 43.478 0.00 0.00 0.00 5.36
97 98 4.021981 GCCTACATCTCAAAATTATGGCCC 60.022 45.833 0.00 0.00 0.00 5.80
98 99 4.524328 CCTACATCTCAAAATTATGGCCCC 59.476 45.833 0.00 0.00 0.00 5.80
99 100 3.308401 ACATCTCAAAATTATGGCCCCC 58.692 45.455 0.00 0.00 0.00 5.40
113 114 4.073201 CCCCCTCCAGTATGCACT 57.927 61.111 0.00 0.00 34.42 4.40
114 115 3.240670 CCCCCTCCAGTATGCACTA 57.759 57.895 0.00 0.00 32.21 2.74
115 116 1.051812 CCCCCTCCAGTATGCACTAG 58.948 60.000 0.00 0.00 32.21 2.57
116 117 1.692762 CCCCCTCCAGTATGCACTAGT 60.693 57.143 0.00 0.00 32.21 2.57
117 118 1.414181 CCCCTCCAGTATGCACTAGTG 59.586 57.143 18.93 18.93 32.21 2.74
119 120 2.111384 CCTCCAGTATGCACTAGTGGT 58.889 52.381 23.95 0.00 46.97 4.16
120 121 2.501723 CCTCCAGTATGCACTAGTGGTT 59.498 50.000 23.95 1.21 46.97 3.67
121 122 3.055094 CCTCCAGTATGCACTAGTGGTTT 60.055 47.826 23.95 0.90 46.97 3.27
122 123 4.565652 CCTCCAGTATGCACTAGTGGTTTT 60.566 45.833 23.95 0.00 46.97 2.43
123 124 4.980573 TCCAGTATGCACTAGTGGTTTTT 58.019 39.130 23.95 0.00 46.97 1.94
124 125 4.759693 TCCAGTATGCACTAGTGGTTTTTG 59.240 41.667 23.95 0.00 46.97 2.44
125 126 4.759693 CCAGTATGCACTAGTGGTTTTTGA 59.240 41.667 23.95 0.00 43.45 2.69
126 127 5.240623 CCAGTATGCACTAGTGGTTTTTGAA 59.759 40.000 23.95 0.00 43.45 2.69
127 128 6.373779 CAGTATGCACTAGTGGTTTTTGAAG 58.626 40.000 23.95 0.00 32.21 3.02
128 129 6.204688 CAGTATGCACTAGTGGTTTTTGAAGA 59.795 38.462 23.95 0.00 32.21 2.87
129 130 6.942576 AGTATGCACTAGTGGTTTTTGAAGAT 59.057 34.615 23.95 0.00 31.45 2.40
130 131 8.100791 AGTATGCACTAGTGGTTTTTGAAGATA 58.899 33.333 23.95 0.00 31.45 1.98
131 132 6.554334 TGCACTAGTGGTTTTTGAAGATAC 57.446 37.500 23.95 2.99 0.00 2.24
132 133 6.058833 TGCACTAGTGGTTTTTGAAGATACA 58.941 36.000 23.95 5.57 0.00 2.29
133 134 6.544197 TGCACTAGTGGTTTTTGAAGATACAA 59.456 34.615 23.95 0.00 0.00 2.41
134 135 7.078228 GCACTAGTGGTTTTTGAAGATACAAG 58.922 38.462 23.95 0.00 0.00 3.16
135 136 7.041372 GCACTAGTGGTTTTTGAAGATACAAGA 60.041 37.037 23.95 0.00 0.00 3.02
136 137 9.003658 CACTAGTGGTTTTTGAAGATACAAGAT 57.996 33.333 15.49 0.00 0.00 2.40
139 140 8.336801 AGTGGTTTTTGAAGATACAAGATACC 57.663 34.615 0.00 0.00 32.40 2.73
140 141 7.942341 AGTGGTTTTTGAAGATACAAGATACCA 59.058 33.333 0.00 0.00 35.79 3.25
141 142 8.739972 GTGGTTTTTGAAGATACAAGATACCAT 58.260 33.333 0.00 0.00 37.92 3.55
142 143 9.308000 TGGTTTTTGAAGATACAAGATACCATT 57.692 29.630 0.00 0.00 34.60 3.16
147 148 9.443323 TTTGAAGATACAAGATACCATTTTCGA 57.557 29.630 0.00 0.00 0.00 3.71
148 149 9.443323 TTGAAGATACAAGATACCATTTTCGAA 57.557 29.630 0.00 0.00 0.00 3.71
149 150 9.613428 TGAAGATACAAGATACCATTTTCGAAT 57.387 29.630 0.00 0.00 0.00 3.34
164 165 9.715123 CCATTTTCGAATTTTAAAATTATGGCC 57.285 29.630 25.34 14.78 38.64 5.36
167 168 8.710835 TTTCGAATTTTAAAATTATGGCCTCC 57.289 30.769 22.82 9.55 38.64 4.30
168 169 6.811954 TCGAATTTTAAAATTATGGCCTCCC 58.188 36.000 22.82 8.95 38.64 4.30
169 170 6.609616 TCGAATTTTAAAATTATGGCCTCCCT 59.390 34.615 22.82 0.24 38.64 4.20
170 171 6.923508 CGAATTTTAAAATTATGGCCTCCCTC 59.076 38.462 22.82 8.07 38.64 4.30
171 172 6.747414 ATTTTAAAATTATGGCCTCCCTCC 57.253 37.500 7.64 0.00 0.00 4.30
172 173 4.890499 TTAAAATTATGGCCTCCCTCCA 57.110 40.909 3.32 0.00 38.09 3.86
173 174 3.319031 AAAATTATGGCCTCCCTCCAG 57.681 47.619 3.32 0.00 36.98 3.86
174 175 1.912862 AATTATGGCCTCCCTCCAGT 58.087 50.000 3.32 0.00 36.98 4.00
175 176 2.815357 ATTATGGCCTCCCTCCAGTA 57.185 50.000 3.32 0.00 36.98 2.74
176 177 2.815357 TTATGGCCTCCCTCCAGTAT 57.185 50.000 3.32 0.00 36.98 2.12
177 178 2.030027 TATGGCCTCCCTCCAGTATG 57.970 55.000 3.32 0.00 36.98 2.39
178 179 0.029681 ATGGCCTCCCTCCAGTATGT 60.030 55.000 3.32 0.00 36.98 2.29
179 180 0.982852 TGGCCTCCCTCCAGTATGTG 60.983 60.000 3.32 0.00 0.00 3.21
180 181 0.983378 GGCCTCCCTCCAGTATGTGT 60.983 60.000 0.00 0.00 0.00 3.72
181 182 1.691482 GGCCTCCCTCCAGTATGTGTA 60.691 57.143 0.00 0.00 0.00 2.90
182 183 1.413077 GCCTCCCTCCAGTATGTGTAC 59.587 57.143 0.00 0.00 0.00 2.90
183 184 2.955461 GCCTCCCTCCAGTATGTGTACT 60.955 54.545 0.00 0.00 41.84 2.73
184 185 3.375699 CCTCCCTCCAGTATGTGTACTT 58.624 50.000 0.00 0.00 39.12 2.24
185 186 3.133003 CCTCCCTCCAGTATGTGTACTTG 59.867 52.174 0.00 0.00 39.12 3.16
186 187 4.023980 CTCCCTCCAGTATGTGTACTTGA 58.976 47.826 0.00 0.00 39.12 3.02
187 188 4.422057 TCCCTCCAGTATGTGTACTTGAA 58.578 43.478 0.00 0.00 39.12 2.69
188 189 5.030147 TCCCTCCAGTATGTGTACTTGAAT 58.970 41.667 0.00 0.00 39.12 2.57
189 190 5.104941 TCCCTCCAGTATGTGTACTTGAATG 60.105 44.000 0.00 0.00 39.12 2.67
190 191 5.338381 CCCTCCAGTATGTGTACTTGAATGT 60.338 44.000 0.00 0.00 39.12 2.71
191 192 6.173339 CCTCCAGTATGTGTACTTGAATGTT 58.827 40.000 0.00 0.00 39.12 2.71
192 193 6.655003 CCTCCAGTATGTGTACTTGAATGTTT 59.345 38.462 0.00 0.00 39.12 2.83
193 194 7.148407 CCTCCAGTATGTGTACTTGAATGTTTC 60.148 40.741 0.00 0.00 39.12 2.78
194 195 7.220740 TCCAGTATGTGTACTTGAATGTTTCA 58.779 34.615 0.00 0.00 39.12 2.69
195 196 7.717436 TCCAGTATGTGTACTTGAATGTTTCAA 59.283 33.333 2.96 2.96 46.68 2.69
218 219 9.613428 TCAATGAAGAACCAATATTACTAGGTG 57.387 33.333 0.00 0.00 33.93 4.00
219 220 9.396022 CAATGAAGAACCAATATTACTAGGTGT 57.604 33.333 0.00 0.00 33.93 4.16
220 221 8.964476 ATGAAGAACCAATATTACTAGGTGTG 57.036 34.615 0.00 0.00 33.93 3.82
221 222 8.141298 TGAAGAACCAATATTACTAGGTGTGA 57.859 34.615 0.00 0.00 33.93 3.58
222 223 8.598916 TGAAGAACCAATATTACTAGGTGTGAA 58.401 33.333 0.00 0.00 33.93 3.18
223 224 9.099454 GAAGAACCAATATTACTAGGTGTGAAG 57.901 37.037 0.00 0.00 33.93 3.02
224 225 7.565680 AGAACCAATATTACTAGGTGTGAAGG 58.434 38.462 0.00 0.00 33.93 3.46
225 226 5.681639 ACCAATATTACTAGGTGTGAAGGC 58.318 41.667 0.00 0.00 32.04 4.35
226 227 5.190925 ACCAATATTACTAGGTGTGAAGGCA 59.809 40.000 0.00 0.00 32.04 4.75
227 228 6.126478 ACCAATATTACTAGGTGTGAAGGCAT 60.126 38.462 0.00 0.00 32.04 4.40
228 229 6.428159 CCAATATTACTAGGTGTGAAGGCATC 59.572 42.308 0.00 0.00 0.00 3.91
229 230 3.906720 TTACTAGGTGTGAAGGCATCC 57.093 47.619 0.00 0.00 0.00 3.51
230 231 1.656587 ACTAGGTGTGAAGGCATCCA 58.343 50.000 0.00 0.00 0.00 3.41
231 232 2.200081 ACTAGGTGTGAAGGCATCCAT 58.800 47.619 0.00 0.00 0.00 3.41
232 233 2.171448 ACTAGGTGTGAAGGCATCCATC 59.829 50.000 0.00 0.00 0.00 3.51
233 234 1.293062 AGGTGTGAAGGCATCCATCT 58.707 50.000 0.00 0.00 0.00 2.90
234 235 1.211457 AGGTGTGAAGGCATCCATCTC 59.789 52.381 0.00 0.00 0.00 2.75
235 236 1.673168 GTGTGAAGGCATCCATCTCC 58.327 55.000 0.00 0.00 0.00 3.71
236 237 1.065199 GTGTGAAGGCATCCATCTCCA 60.065 52.381 0.00 0.00 0.00 3.86
237 238 1.634973 TGTGAAGGCATCCATCTCCAA 59.365 47.619 0.00 0.00 0.00 3.53
238 239 2.041485 TGTGAAGGCATCCATCTCCAAA 59.959 45.455 0.00 0.00 0.00 3.28
239 240 3.091545 GTGAAGGCATCCATCTCCAAAA 58.908 45.455 0.00 0.00 0.00 2.44
240 241 3.703052 GTGAAGGCATCCATCTCCAAAAT 59.297 43.478 0.00 0.00 0.00 1.82
241 242 3.956199 TGAAGGCATCCATCTCCAAAATC 59.044 43.478 0.00 0.00 0.00 2.17
242 243 3.675348 AGGCATCCATCTCCAAAATCA 57.325 42.857 0.00 0.00 0.00 2.57
243 244 3.294214 AGGCATCCATCTCCAAAATCAC 58.706 45.455 0.00 0.00 0.00 3.06
244 245 2.033801 GGCATCCATCTCCAAAATCACG 59.966 50.000 0.00 0.00 0.00 4.35
245 246 2.684881 GCATCCATCTCCAAAATCACGT 59.315 45.455 0.00 0.00 0.00 4.49
246 247 3.488047 GCATCCATCTCCAAAATCACGTG 60.488 47.826 9.94 9.94 0.00 4.49
247 248 3.694043 TCCATCTCCAAAATCACGTGA 57.306 42.857 22.48 22.48 0.00 4.35
248 249 4.220693 TCCATCTCCAAAATCACGTGAT 57.779 40.909 25.18 25.18 36.07 3.06
249 250 4.588899 TCCATCTCCAAAATCACGTGATT 58.411 39.130 32.82 32.82 45.91 2.57
280 281 8.754230 AGTTTAAAGTTATGTCGACTACCTTC 57.246 34.615 17.92 2.85 0.00 3.46
297 298 1.935873 CTTCGCCACCTCATATGTGTG 59.064 52.381 16.34 16.34 31.71 3.82
298 299 1.190643 TCGCCACCTCATATGTGTGA 58.809 50.000 21.72 9.20 31.66 3.58
302 305 3.347216 GCCACCTCATATGTGTGAACTT 58.653 45.455 21.72 0.00 31.66 2.66
312 315 8.853077 TCATATGTGTGAACTTTCTCTTCATT 57.147 30.769 1.90 0.00 30.46 2.57
318 321 8.421784 TGTGTGAACTTTCTCTTCATTAGTAGT 58.578 33.333 0.00 0.00 30.46 2.73
347 350 6.284891 TGATATCATCAAGTGAGTGTCACA 57.715 37.500 5.62 0.00 41.09 3.58
365 368 8.250332 AGTGTCACAAGTTTGATTACACAAAAT 58.750 29.630 20.10 0.00 40.62 1.82
432 435 6.753107 TTCCATTTTTCTCGAGGGAAATAC 57.247 37.500 13.56 0.00 35.51 1.89
435 438 6.374333 TCCATTTTTCTCGAGGGAAATACAAG 59.626 38.462 13.56 7.34 35.51 3.16
480 500 5.775195 AGGGGAAGACAAGTTTTTCTTATGG 59.225 40.000 0.00 0.00 34.66 2.74
532 559 7.807907 CCACATACTCTTCGCAAAAATTTAACT 59.192 33.333 0.00 0.00 0.00 2.24
615 672 3.161866 TGAACCAGCCACCTTATTTTCC 58.838 45.455 0.00 0.00 0.00 3.13
643 700 0.984230 TTGAACCAGCCACCTAGAGG 59.016 55.000 0.00 0.00 42.17 3.69
689 769 5.993106 AAACAAGACGAAAGAAGGAGAAG 57.007 39.130 0.00 0.00 0.00 2.85
696 776 4.777463 ACGAAAGAAGGAGAAGGAAAACA 58.223 39.130 0.00 0.00 0.00 2.83
723 803 2.174639 CCTACCAACAATCTATGGGCCA 59.825 50.000 9.61 9.61 41.17 5.36
734 814 4.919774 TCTATGGGCCAAAGTCAAGTTA 57.080 40.909 11.89 0.00 0.00 2.24
761 841 3.531207 GCCCGTACCGTAGTCCCC 61.531 72.222 0.00 0.00 0.00 4.81
898 979 3.157949 CCGCCTCTCCCTTCTCCC 61.158 72.222 0.00 0.00 0.00 4.30
1024 1105 0.179169 GTACGGACACGCTTCTCCTC 60.179 60.000 0.00 0.00 46.04 3.71
1028 1109 1.536943 GGACACGCTTCTCCTCTGGT 61.537 60.000 0.00 0.00 0.00 4.00
1029 1110 0.318762 GACACGCTTCTCCTCTGGTT 59.681 55.000 0.00 0.00 0.00 3.67
1031 1112 0.318441 CACGCTTCTCCTCTGGTTCA 59.682 55.000 0.00 0.00 0.00 3.18
1032 1113 1.048601 ACGCTTCTCCTCTGGTTCAA 58.951 50.000 0.00 0.00 0.00 2.69
1045 1126 1.226030 GGTTCAAACCGTAGCTGCGT 61.226 55.000 22.73 8.36 39.66 5.24
1046 1127 0.110823 GTTCAAACCGTAGCTGCGTG 60.111 55.000 22.73 14.45 0.00 5.34
1057 1138 3.119193 CTGCGTGTTGCTTTGGGT 58.881 55.556 0.00 0.00 46.63 4.51
1059 1140 0.594796 CTGCGTGTTGCTTTGGGTTC 60.595 55.000 0.00 0.00 46.63 3.62
1060 1141 1.034838 TGCGTGTTGCTTTGGGTTCT 61.035 50.000 0.00 0.00 46.63 3.01
1062 1143 1.021202 CGTGTTGCTTTGGGTTCTGA 58.979 50.000 0.00 0.00 0.00 3.27
1065 1146 2.291741 GTGTTGCTTTGGGTTCTGAGAG 59.708 50.000 0.00 0.00 0.00 3.20
1069 1150 0.321671 CTTTGGGTTCTGAGAGCCGA 59.678 55.000 9.30 2.24 40.06 5.54
1077 1158 1.674359 TCTGAGAGCCGAGAGATGTC 58.326 55.000 0.00 0.00 0.00 3.06
1079 1160 1.603802 CTGAGAGCCGAGAGATGTCTC 59.396 57.143 9.82 9.82 45.29 3.36
1111 1192 2.954318 GCTATGTGATCCAGCATTGGTT 59.046 45.455 0.00 0.00 45.26 3.67
1112 1193 4.136796 GCTATGTGATCCAGCATTGGTTA 58.863 43.478 0.00 0.00 45.26 2.85
1114 1195 2.722094 TGTGATCCAGCATTGGTTACC 58.278 47.619 0.00 0.00 45.26 2.85
1132 1213 5.348164 GTTACCAGTCAATTTGTTTGCTGT 58.652 37.500 0.00 0.00 37.57 4.40
1140 1221 0.459237 TTTGTTTGCTGTTGTGGCGG 60.459 50.000 0.00 0.00 0.00 6.13
1144 1225 4.560743 TGCTGTTGTGGCGGCTGA 62.561 61.111 11.43 0.00 41.12 4.26
1149 1230 2.046023 TTGTGGCGGCTGATCTGG 60.046 61.111 11.43 0.00 0.00 3.86
1150 1231 4.783621 TGTGGCGGCTGATCTGGC 62.784 66.667 15.16 15.16 46.07 4.85
1173 1254 0.935196 CGGTGCTTAGGATTTACCGC 59.065 55.000 0.00 0.00 46.19 5.68
1222 1303 2.728690 TTCGTACCGTGTTACATGCT 57.271 45.000 0.00 0.00 0.00 3.79
1238 1319 0.039256 TGCTTCGCATCTTTGGTTGC 60.039 50.000 0.00 0.00 31.71 4.17
1272 1353 7.436118 TCTAATCAGAAAGCATGCTTGTTTTT 58.564 30.769 32.54 22.28 36.54 1.94
1299 1382 2.941453 TGCTCGAGTAACCACTGATC 57.059 50.000 15.13 0.00 34.21 2.92
1319 1402 5.833667 TGATCCGTCCTGTAGATCTACATTT 59.166 40.000 30.76 13.62 44.15 2.32
1324 1407 6.461648 CCGTCCTGTAGATCTACATTTGATGT 60.462 42.308 30.76 0.00 44.15 3.06
1405 1488 3.417069 TCAGACCCATGAATTCGTTGT 57.583 42.857 0.00 0.00 0.00 3.32
1406 1489 3.073678 TCAGACCCATGAATTCGTTGTG 58.926 45.455 0.00 0.00 0.00 3.33
1427 1510 0.107654 GCCACGCTGTCCCTAGAAAT 60.108 55.000 0.00 0.00 0.00 2.17
1441 1524 3.496130 CCTAGAAATCTGTAGCGGCATTG 59.504 47.826 1.45 0.00 0.00 2.82
1528 1613 6.373005 TCCATCAAGTGAAGGAATAAGTCA 57.627 37.500 2.82 0.00 38.79 3.41
1573 1659 0.905809 TAGGCGCCCCTTTGTGTCTA 60.906 55.000 26.15 0.87 42.87 2.59
1574 1660 1.077716 GGCGCCCCTTTGTGTCTAT 60.078 57.895 18.11 0.00 0.00 1.98
1575 1661 1.095807 GGCGCCCCTTTGTGTCTATC 61.096 60.000 18.11 0.00 0.00 2.08
1611 1697 6.529125 GTGATTTAGATGTTCAATTGCTGTGG 59.471 38.462 0.00 0.00 0.00 4.17
1636 1722 7.255451 GGACATCAGATTTTGTTGAACCTGTTA 60.255 37.037 0.00 0.00 32.10 2.41
1645 1731 4.793071 TGTTGAACCTGTTATGCGAATTG 58.207 39.130 0.00 0.00 0.00 2.32
1727 1814 6.466885 TGTAGTCCTCCAAGCTTATTAGAC 57.533 41.667 0.00 4.72 0.00 2.59
1730 1817 4.651962 AGTCCTCCAAGCTTATTAGACCTC 59.348 45.833 0.00 0.00 0.00 3.85
1733 1820 5.834204 TCCTCCAAGCTTATTAGACCTCTAC 59.166 44.000 0.00 0.00 0.00 2.59
1734 1821 5.598830 CCTCCAAGCTTATTAGACCTCTACA 59.401 44.000 0.00 0.00 0.00 2.74
1749 1836 4.278419 ACCTCTACATGTTTCTTGCAAACC 59.722 41.667 2.30 0.00 0.00 3.27
1766 1853 8.410673 TTGCAAACCTAGGTCATGTTTTATTA 57.589 30.769 16.64 0.00 30.19 0.98
1825 1912 3.067180 CCATTGTCATGCACTACCATTCC 59.933 47.826 0.00 0.00 0.00 3.01
1866 1953 6.711277 TCCATATTTCAGTAAGTTGCAGAGT 58.289 36.000 0.00 0.00 0.00 3.24
2084 2171 5.130975 AGCATGTTGAAGAGGTACCATATGA 59.869 40.000 15.94 0.00 0.00 2.15
2126 2213 9.979578 TTTCACTTGTGCTGAAAACATAATTAT 57.020 25.926 0.00 0.00 35.23 1.28
2152 2239 9.311916 TGTTTCTTGTTCTTCAATATGGTTTTG 57.688 29.630 0.00 0.00 35.35 2.44
2168 2256 5.971763 TGGTTTTGCTTGTGTTTAGTGAAT 58.028 33.333 0.00 0.00 0.00 2.57
2169 2257 5.809562 TGGTTTTGCTTGTGTTTAGTGAATG 59.190 36.000 0.00 0.00 0.00 2.67
2171 2259 6.198966 GGTTTTGCTTGTGTTTAGTGAATGAG 59.801 38.462 0.00 0.00 0.00 2.90
2377 2556 9.685276 TCACATTTCCTGATATTTCTGTTGTAT 57.315 29.630 0.00 0.00 0.00 2.29
2440 2619 2.508716 AGACTGCATGGATGTGGAATCT 59.491 45.455 0.00 0.00 0.00 2.40
2470 2649 8.225603 AGAAGATGAACAAAAACAAGAAGCTA 57.774 30.769 0.00 0.00 0.00 3.32
2539 2718 3.864789 ATCATTAAGCAGATTCCCCGT 57.135 42.857 0.00 0.00 0.00 5.28
2617 2798 2.813754 TGCATTAGAAGACTGTTGGTGC 59.186 45.455 0.00 0.00 0.00 5.01
2618 2799 2.813754 GCATTAGAAGACTGTTGGTGCA 59.186 45.455 0.00 0.00 0.00 4.57
2622 2803 3.213206 AGAAGACTGTTGGTGCAATCA 57.787 42.857 0.00 0.00 0.00 2.57
2623 2804 3.759581 AGAAGACTGTTGGTGCAATCAT 58.240 40.909 0.00 0.00 0.00 2.45
2752 2936 6.545666 TGGGCCATGTTATGAAATACAGTAAG 59.454 38.462 0.00 0.00 0.00 2.34
2780 3065 0.664761 TCTTTGCTGTCTGCTTGTGC 59.335 50.000 3.20 0.00 43.37 4.57
2819 3104 2.765699 TCACTGGCACACTATAGCATCA 59.234 45.455 0.00 0.00 0.00 3.07
2821 3106 2.158900 ACTGGCACACTATAGCATCACC 60.159 50.000 0.00 0.00 0.00 4.02
2839 3124 3.117776 TCACCATCTCTTGCTGGCATAAT 60.118 43.478 0.00 0.00 35.88 1.28
2845 3130 4.194640 TCTCTTGCTGGCATAATGTCTTC 58.805 43.478 0.00 0.00 0.00 2.87
2855 3140 7.042051 GCTGGCATAATGTCTTCGTCTTTATTA 60.042 37.037 0.00 0.00 0.00 0.98
2885 3170 1.747709 AGCATCTGTGATGTGCTTCC 58.252 50.000 8.98 0.00 46.29 3.46
2886 3171 1.281287 AGCATCTGTGATGTGCTTCCT 59.719 47.619 8.98 0.00 46.29 3.36
2913 3204 3.228188 TCATCCTTGCACTTTGAGGTT 57.772 42.857 1.39 0.00 32.33 3.50
2983 3274 8.825667 TCCTTTTTGTTTCATATTTTACTGCC 57.174 30.769 0.00 0.00 0.00 4.85
3035 3326 7.335924 TCCACAAGTATATAAAACTGTGCCTTC 59.664 37.037 8.31 0.00 30.92 3.46
3090 3381 0.823356 GAGCTGGGTTTGTGGCAAGA 60.823 55.000 0.00 0.00 0.00 3.02
3092 3383 1.654220 CTGGGTTTGTGGCAAGACG 59.346 57.895 0.00 0.00 0.00 4.18
3118 3409 4.527427 GGGTTTACTGGTCTGAAGTAGTCT 59.473 45.833 0.00 0.00 31.96 3.24
3148 3439 9.443283 GATGAATGCTGAAATCTATGTTACAAC 57.557 33.333 0.00 0.00 0.00 3.32
3153 3444 8.978874 TGCTGAAATCTATGTTACAACCATAT 57.021 30.769 0.00 0.00 0.00 1.78
3166 3457 8.768397 TGTTACAACCATATCTTCTAGTGGATT 58.232 33.333 2.03 0.00 35.69 3.01
3245 3536 7.903452 TGTTTAGATTATGTACTTCGTAGCG 57.097 36.000 0.00 0.00 0.00 4.26
3246 3537 7.475015 TGTTTAGATTATGTACTTCGTAGCGT 58.525 34.615 0.00 0.00 0.00 5.07
3247 3538 8.611757 TGTTTAGATTATGTACTTCGTAGCGTA 58.388 33.333 0.00 0.00 0.00 4.42
3248 3539 9.604626 GTTTAGATTATGTACTTCGTAGCGTAT 57.395 33.333 0.00 0.00 0.00 3.06
3249 3540 9.603298 TTTAGATTATGTACTTCGTAGCGTATG 57.397 33.333 0.00 0.00 0.00 2.39
3250 3541 7.430992 AGATTATGTACTTCGTAGCGTATGA 57.569 36.000 0.00 0.00 0.00 2.15
3251 3542 8.041829 AGATTATGTACTTCGTAGCGTATGAT 57.958 34.615 0.00 0.00 0.00 2.45
3252 3543 7.963465 AGATTATGTACTTCGTAGCGTATGATG 59.037 37.037 0.00 0.00 0.00 3.07
3253 3544 3.624900 TGTACTTCGTAGCGTATGATGC 58.375 45.455 0.00 0.00 0.00 3.91
3254 3545 2.863401 ACTTCGTAGCGTATGATGCA 57.137 45.000 0.00 0.00 31.07 3.96
3255 3546 3.159353 ACTTCGTAGCGTATGATGCAA 57.841 42.857 0.00 0.00 31.07 4.08
3256 3547 3.717707 ACTTCGTAGCGTATGATGCAAT 58.282 40.909 0.00 0.00 31.07 3.56
3257 3548 3.490896 ACTTCGTAGCGTATGATGCAATG 59.509 43.478 0.00 0.00 31.07 2.82
3258 3549 3.363341 TCGTAGCGTATGATGCAATGA 57.637 42.857 0.00 0.00 31.07 2.57
3259 3550 3.308530 TCGTAGCGTATGATGCAATGAG 58.691 45.455 0.00 0.00 31.07 2.90
3260 3551 2.409715 CGTAGCGTATGATGCAATGAGG 59.590 50.000 0.00 0.00 31.07 3.86
3261 3552 1.233019 AGCGTATGATGCAATGAGGC 58.767 50.000 0.00 0.00 31.07 4.70
3287 3578 9.800433 CATACATTGCTATCTTCTGGACTATAG 57.200 37.037 0.00 0.00 0.00 1.31
3288 3579 7.847711 ACATTGCTATCTTCTGGACTATAGT 57.152 36.000 4.68 4.68 0.00 2.12
3289 3580 8.941995 ACATTGCTATCTTCTGGACTATAGTA 57.058 34.615 5.09 0.00 0.00 1.82
3290 3581 9.019656 ACATTGCTATCTTCTGGACTATAGTAG 57.980 37.037 5.09 0.51 0.00 2.57
3291 3582 9.019656 CATTGCTATCTTCTGGACTATAGTAGT 57.980 37.037 5.09 0.00 42.86 2.73
3294 3585 9.504708 TGCTATCTTCTGGACTATAGTAGTAAC 57.495 37.037 5.09 0.00 39.59 2.50
3295 3586 9.729281 GCTATCTTCTGGACTATAGTAGTAACT 57.271 37.037 5.09 0.00 39.59 2.24
3312 3603 8.886719 AGTAGTAACTTTAGTGTTGTTTTCCAC 58.113 33.333 0.00 0.00 29.00 4.02
3313 3604 7.092137 AGTAACTTTAGTGTTGTTTTCCACC 57.908 36.000 0.00 0.00 31.88 4.61
3314 3605 6.888088 AGTAACTTTAGTGTTGTTTTCCACCT 59.112 34.615 0.00 0.00 31.88 4.00
3315 3606 6.599356 AACTTTAGTGTTGTTTTCCACCTT 57.401 33.333 0.00 0.00 31.88 3.50
3316 3607 5.961272 ACTTTAGTGTTGTTTTCCACCTTG 58.039 37.500 0.00 0.00 31.88 3.61
3317 3608 5.479027 ACTTTAGTGTTGTTTTCCACCTTGT 59.521 36.000 0.00 0.00 31.88 3.16
3318 3609 5.986501 TTAGTGTTGTTTTCCACCTTGTT 57.013 34.783 0.00 0.00 31.88 2.83
3319 3610 7.177041 ACTTTAGTGTTGTTTTCCACCTTGTTA 59.823 33.333 0.00 0.00 31.88 2.41
3320 3611 5.319140 AGTGTTGTTTTCCACCTTGTTAC 57.681 39.130 0.00 0.00 31.88 2.50
3321 3612 5.014202 AGTGTTGTTTTCCACCTTGTTACT 58.986 37.500 0.00 0.00 31.88 2.24
3322 3613 6.181908 AGTGTTGTTTTCCACCTTGTTACTA 58.818 36.000 0.00 0.00 31.88 1.82
3323 3614 6.094464 AGTGTTGTTTTCCACCTTGTTACTAC 59.906 38.462 0.00 0.00 31.88 2.73
3324 3615 6.094464 GTGTTGTTTTCCACCTTGTTACTACT 59.906 38.462 0.00 0.00 0.00 2.57
3325 3616 6.316890 TGTTGTTTTCCACCTTGTTACTACTC 59.683 38.462 0.00 0.00 0.00 2.59
3326 3617 6.243216 TGTTTTCCACCTTGTTACTACTCT 57.757 37.500 0.00 0.00 0.00 3.24
3327 3618 6.655930 TGTTTTCCACCTTGTTACTACTCTT 58.344 36.000 0.00 0.00 0.00 2.85
3328 3619 6.540914 TGTTTTCCACCTTGTTACTACTCTTG 59.459 38.462 0.00 0.00 0.00 3.02
3329 3620 4.884668 TCCACCTTGTTACTACTCTTGG 57.115 45.455 0.00 0.00 0.00 3.61
3330 3621 4.228824 TCCACCTTGTTACTACTCTTGGT 58.771 43.478 0.00 0.00 0.00 3.67
3331 3622 4.657039 TCCACCTTGTTACTACTCTTGGTT 59.343 41.667 0.00 0.00 0.00 3.67
3332 3623 4.995487 CCACCTTGTTACTACTCTTGGTTC 59.005 45.833 0.00 0.00 0.00 3.62
3333 3624 5.221661 CCACCTTGTTACTACTCTTGGTTCT 60.222 44.000 0.00 0.00 0.00 3.01
3334 3625 6.289064 CACCTTGTTACTACTCTTGGTTCTT 58.711 40.000 0.00 0.00 0.00 2.52
3335 3626 7.439381 CACCTTGTTACTACTCTTGGTTCTTA 58.561 38.462 0.00 0.00 0.00 2.10
3336 3627 8.095169 CACCTTGTTACTACTCTTGGTTCTTAT 58.905 37.037 0.00 0.00 0.00 1.73
3337 3628 8.095169 ACCTTGTTACTACTCTTGGTTCTTATG 58.905 37.037 0.00 0.00 0.00 1.90
3338 3629 8.095169 CCTTGTTACTACTCTTGGTTCTTATGT 58.905 37.037 0.00 0.00 0.00 2.29
3339 3630 8.827177 TTGTTACTACTCTTGGTTCTTATGTG 57.173 34.615 0.00 0.00 0.00 3.21
3340 3631 7.383687 TGTTACTACTCTTGGTTCTTATGTGG 58.616 38.462 0.00 0.00 0.00 4.17
3341 3632 7.015877 TGTTACTACTCTTGGTTCTTATGTGGT 59.984 37.037 0.00 0.00 0.00 4.16
3342 3633 8.526147 GTTACTACTCTTGGTTCTTATGTGGTA 58.474 37.037 0.00 0.00 0.00 3.25
3343 3634 7.549147 ACTACTCTTGGTTCTTATGTGGTAA 57.451 36.000 0.00 0.00 0.00 2.85
3344 3635 8.147244 ACTACTCTTGGTTCTTATGTGGTAAT 57.853 34.615 0.00 0.00 0.00 1.89
3345 3636 8.258708 ACTACTCTTGGTTCTTATGTGGTAATC 58.741 37.037 0.00 0.00 0.00 1.75
3346 3637 7.016153 ACTCTTGGTTCTTATGTGGTAATCA 57.984 36.000 0.00 0.00 0.00 2.57
3347 3638 7.458397 ACTCTTGGTTCTTATGTGGTAATCAA 58.542 34.615 0.00 0.00 0.00 2.57
3348 3639 7.390718 ACTCTTGGTTCTTATGTGGTAATCAAC 59.609 37.037 0.00 0.00 0.00 3.18
3349 3640 7.458397 TCTTGGTTCTTATGTGGTAATCAACT 58.542 34.615 0.00 0.00 0.00 3.16
3350 3641 7.390440 TCTTGGTTCTTATGTGGTAATCAACTG 59.610 37.037 0.00 0.00 0.00 3.16
3351 3642 6.539173 TGGTTCTTATGTGGTAATCAACTGT 58.461 36.000 0.00 0.00 0.00 3.55
3352 3643 7.001674 TGGTTCTTATGTGGTAATCAACTGTT 58.998 34.615 0.00 0.00 0.00 3.16
3353 3644 7.504238 TGGTTCTTATGTGGTAATCAACTGTTT 59.496 33.333 0.00 0.00 0.00 2.83
3354 3645 8.357402 GGTTCTTATGTGGTAATCAACTGTTTT 58.643 33.333 0.00 0.00 0.00 2.43
3355 3646 9.180678 GTTCTTATGTGGTAATCAACTGTTTTG 57.819 33.333 0.00 0.00 0.00 2.44
3356 3647 8.458573 TCTTATGTGGTAATCAACTGTTTTGT 57.541 30.769 0.00 0.00 0.00 2.83
3357 3648 8.908903 TCTTATGTGGTAATCAACTGTTTTGTT 58.091 29.630 0.00 0.00 0.00 2.83
3358 3649 9.528018 CTTATGTGGTAATCAACTGTTTTGTTT 57.472 29.630 0.00 0.00 0.00 2.83
3361 3652 8.282455 TGTGGTAATCAACTGTTTTGTTTAGA 57.718 30.769 0.00 0.00 0.00 2.10
3362 3653 8.908903 TGTGGTAATCAACTGTTTTGTTTAGAT 58.091 29.630 0.00 0.00 0.00 1.98
3363 3654 9.744468 GTGGTAATCAACTGTTTTGTTTAGATT 57.256 29.630 0.00 0.00 31.78 2.40
3446 3738 5.708230 AGTAACTGAACTGTTGTTTTCCACA 59.292 36.000 0.00 0.00 36.39 4.17
3453 3745 7.551585 TGAACTGTTGTTTTCCACATTGTTAT 58.448 30.769 0.00 0.00 36.39 1.89
3479 3771 9.924650 TTACTCTTGTTCTTACTTGGTAATCTC 57.075 33.333 0.00 0.00 0.00 2.75
3652 3944 1.010935 AGAACGTGCAGATGAGCGTG 61.011 55.000 0.00 0.00 37.64 5.34
3698 3990 5.460646 AGAAGAATTGGCAAAACGTATGTG 58.539 37.500 3.01 0.00 0.00 3.21
3700 3992 4.794169 AGAATTGGCAAAACGTATGTGAC 58.206 39.130 3.01 0.00 0.00 3.67
3712 4004 1.257750 TATGTGACGTGCCCTCTGCT 61.258 55.000 0.00 0.00 42.00 4.24
3721 4013 1.005630 GCCCTCTGCTATACCTGCG 60.006 63.158 0.00 0.00 36.87 5.18
3735 4027 3.932545 ACCTGCGCACAATATTTTCAA 57.067 38.095 5.66 0.00 0.00 2.69
3858 4152 2.880443 AGGTGTACCGGTTGTTCTAGA 58.120 47.619 15.04 0.00 42.08 2.43
3898 4193 2.040278 TCCAGGAGATTGACAACTTGGG 59.960 50.000 5.83 0.00 0.00 4.12
3937 4232 6.027131 TCTCAATTATCAAATTTTCGTGCGG 58.973 36.000 0.00 0.00 32.87 5.69
4013 4309 5.640732 ACTTGATGACATTTTATCCGTTGC 58.359 37.500 0.00 0.00 0.00 4.17
4047 4343 2.031616 TGCTCTGCCTGCTGTCAC 59.968 61.111 0.00 0.00 0.00 3.67
4048 4344 2.031616 GCTCTGCCTGCTGTCACA 59.968 61.111 0.00 0.00 0.00 3.58
4049 4345 2.033755 GCTCTGCCTGCTGTCACAG 61.034 63.158 0.00 0.00 37.42 3.66
4101 4397 3.307782 GTCCATTGGTATTTACGACCGTG 59.692 47.826 5.20 0.00 40.09 4.94
4124 4420 7.359765 CGTGAGAATCTTATTTTACCGTGTGTT 60.360 37.037 0.00 0.00 34.92 3.32
4125 4421 7.744715 GTGAGAATCTTATTTTACCGTGTGTTG 59.255 37.037 0.00 0.00 34.92 3.33
4238 4540 4.764679 TCGATCACACCCAATTCTTTTG 57.235 40.909 0.00 0.00 0.00 2.44
4239 4541 3.505680 TCGATCACACCCAATTCTTTTGG 59.494 43.478 0.00 0.00 39.25 3.28
4296 4621 1.656652 CCCATCTGGCTTTCTACACG 58.343 55.000 0.00 0.00 0.00 4.49
4298 4623 2.158900 CCCATCTGGCTTTCTACACGAT 60.159 50.000 0.00 0.00 0.00 3.73
4299 4624 2.868583 CCATCTGGCTTTCTACACGATG 59.131 50.000 0.00 0.00 0.00 3.84
4300 4625 3.525537 CATCTGGCTTTCTACACGATGT 58.474 45.455 0.00 0.00 0.00 3.06
4302 4627 3.585862 TCTGGCTTTCTACACGATGTTC 58.414 45.455 0.00 0.00 0.00 3.18
4304 4629 2.301870 TGGCTTTCTACACGATGTTCCT 59.698 45.455 0.00 0.00 0.00 3.36
4305 4630 2.673368 GGCTTTCTACACGATGTTCCTG 59.327 50.000 0.00 0.00 0.00 3.86
4306 4631 3.585862 GCTTTCTACACGATGTTCCTGA 58.414 45.455 0.00 0.00 0.00 3.86
4307 4632 4.184629 GCTTTCTACACGATGTTCCTGAT 58.815 43.478 0.00 0.00 0.00 2.90
4308 4633 4.268884 GCTTTCTACACGATGTTCCTGATC 59.731 45.833 0.00 0.00 0.00 2.92
4309 4634 5.400066 TTTCTACACGATGTTCCTGATCA 57.600 39.130 0.00 0.00 0.00 2.92
4332 4666 8.909708 TCAAATTTTATATTCTCTTTGTGCGG 57.090 30.769 0.00 0.00 0.00 5.69
4333 4667 8.519526 TCAAATTTTATATTCTCTTTGTGCGGT 58.480 29.630 0.00 0.00 0.00 5.68
4334 4668 9.139174 CAAATTTTATATTCTCTTTGTGCGGTT 57.861 29.630 0.00 0.00 0.00 4.44
4335 4669 9.705290 AAATTTTATATTCTCTTTGTGCGGTTT 57.295 25.926 0.00 0.00 0.00 3.27
4336 4670 8.911247 ATTTTATATTCTCTTTGTGCGGTTTC 57.089 30.769 0.00 0.00 0.00 2.78
4337 4671 7.681939 TTTATATTCTCTTTGTGCGGTTTCT 57.318 32.000 0.00 0.00 0.00 2.52
4338 4672 5.803020 ATATTCTCTTTGTGCGGTTTCTC 57.197 39.130 0.00 0.00 0.00 2.87
4339 4673 2.910688 TCTCTTTGTGCGGTTTCTCT 57.089 45.000 0.00 0.00 0.00 3.10
4348 4682 3.994392 TGTGCGGTTTCTCTCATAAGTTC 59.006 43.478 0.00 0.00 0.00 3.01
4367 4701 0.991770 CGGTTTCTGTTTCAAGCGCG 60.992 55.000 0.00 0.00 37.11 6.86
4384 4718 4.857251 GGATAACTCCGTGGCCAG 57.143 61.111 5.11 0.00 0.00 4.85
4406 4740 3.391799 AACCCCCAAACCGCTATAAAT 57.608 42.857 0.00 0.00 0.00 1.40
4410 4744 4.141111 ACCCCCAAACCGCTATAAATACAT 60.141 41.667 0.00 0.00 0.00 2.29
4421 4755 5.627735 CGCTATAAATACATCAGCCATCCCT 60.628 44.000 0.00 0.00 0.00 4.20
4427 4761 2.045524 ACATCAGCCATCCCTACTCAG 58.954 52.381 0.00 0.00 0.00 3.35
4436 4770 4.256920 CCATCCCTACTCAGAAAACACAG 58.743 47.826 0.00 0.00 0.00 3.66
4437 4771 3.402628 TCCCTACTCAGAAAACACAGC 57.597 47.619 0.00 0.00 0.00 4.40
4438 4772 2.069273 CCCTACTCAGAAAACACAGCG 58.931 52.381 0.00 0.00 0.00 5.18
4439 4773 2.548067 CCCTACTCAGAAAACACAGCGT 60.548 50.000 0.00 0.00 0.00 5.07
4440 4774 3.305813 CCCTACTCAGAAAACACAGCGTA 60.306 47.826 0.00 0.00 0.00 4.42
4441 4775 3.673809 CCTACTCAGAAAACACAGCGTAC 59.326 47.826 0.00 0.00 0.00 3.67
4442 4776 2.480845 ACTCAGAAAACACAGCGTACC 58.519 47.619 0.00 0.00 0.00 3.34
4443 4777 1.798813 CTCAGAAAACACAGCGTACCC 59.201 52.381 0.00 0.00 0.00 3.69
4444 4778 0.872388 CAGAAAACACAGCGTACCCC 59.128 55.000 0.00 0.00 0.00 4.95
4445 4779 0.470766 AGAAAACACAGCGTACCCCA 59.529 50.000 0.00 0.00 0.00 4.96
4446 4780 1.073284 AGAAAACACAGCGTACCCCAT 59.927 47.619 0.00 0.00 0.00 4.00
4460 4804 0.674534 CCCCATCGTCACTAGCTACC 59.325 60.000 0.00 0.00 0.00 3.18
4516 8265 2.763292 AGCTCGCTGCCATCCTCT 60.763 61.111 0.00 0.00 44.23 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 9.016623 GCCCGTAATAAATTCTTTGAATGTAAC 57.983 33.333 0.00 0.00 0.00 2.50
50 51 8.192110 GGCCCGTAATAAATTCTTTGAATGTAA 58.808 33.333 0.00 0.00 0.00 2.41
51 52 7.558444 AGGCCCGTAATAAATTCTTTGAATGTA 59.442 33.333 0.00 0.00 0.00 2.29
52 53 6.379988 AGGCCCGTAATAAATTCTTTGAATGT 59.620 34.615 0.00 0.00 0.00 2.71
53 54 6.805713 AGGCCCGTAATAAATTCTTTGAATG 58.194 36.000 0.00 0.00 0.00 2.67
54 55 7.558444 TGTAGGCCCGTAATAAATTCTTTGAAT 59.442 33.333 0.00 0.00 0.00 2.57
55 56 6.885376 TGTAGGCCCGTAATAAATTCTTTGAA 59.115 34.615 0.00 0.00 0.00 2.69
56 57 6.416415 TGTAGGCCCGTAATAAATTCTTTGA 58.584 36.000 0.00 0.00 0.00 2.69
57 58 6.687081 TGTAGGCCCGTAATAAATTCTTTG 57.313 37.500 0.00 0.00 0.00 2.77
58 59 7.287810 AGATGTAGGCCCGTAATAAATTCTTT 58.712 34.615 0.00 0.00 0.00 2.52
59 60 6.838382 AGATGTAGGCCCGTAATAAATTCTT 58.162 36.000 0.00 0.00 0.00 2.52
60 61 6.042781 TGAGATGTAGGCCCGTAATAAATTCT 59.957 38.462 0.00 0.00 0.00 2.40
61 62 6.228258 TGAGATGTAGGCCCGTAATAAATTC 58.772 40.000 0.00 0.00 0.00 2.17
62 63 6.182507 TGAGATGTAGGCCCGTAATAAATT 57.817 37.500 0.00 0.00 0.00 1.82
63 64 5.818678 TGAGATGTAGGCCCGTAATAAAT 57.181 39.130 0.00 0.00 0.00 1.40
64 65 5.617528 TTGAGATGTAGGCCCGTAATAAA 57.382 39.130 0.00 0.00 0.00 1.40
65 66 5.617528 TTTGAGATGTAGGCCCGTAATAA 57.382 39.130 0.00 0.00 0.00 1.40
66 67 5.617528 TTTTGAGATGTAGGCCCGTAATA 57.382 39.130 0.00 0.00 0.00 0.98
67 68 4.497291 TTTTGAGATGTAGGCCCGTAAT 57.503 40.909 0.00 0.00 0.00 1.89
68 69 3.985019 TTTTGAGATGTAGGCCCGTAA 57.015 42.857 0.00 0.00 0.00 3.18
69 70 4.497291 AATTTTGAGATGTAGGCCCGTA 57.503 40.909 0.00 0.00 0.00 4.02
70 71 3.366052 AATTTTGAGATGTAGGCCCGT 57.634 42.857 0.00 0.00 0.00 5.28
71 72 4.216257 CCATAATTTTGAGATGTAGGCCCG 59.784 45.833 0.00 0.00 0.00 6.13
72 73 4.021981 GCCATAATTTTGAGATGTAGGCCC 60.022 45.833 0.00 0.00 32.50 5.80
73 74 5.126396 GCCATAATTTTGAGATGTAGGCC 57.874 43.478 0.00 0.00 32.50 5.19
74 75 4.021981 GGGCCATAATTTTGAGATGTAGGC 60.022 45.833 4.39 0.00 37.69 3.93
75 76 4.524328 GGGGCCATAATTTTGAGATGTAGG 59.476 45.833 4.39 0.00 0.00 3.18
76 77 4.524328 GGGGGCCATAATTTTGAGATGTAG 59.476 45.833 4.39 0.00 0.00 2.74
77 78 4.479158 GGGGGCCATAATTTTGAGATGTA 58.521 43.478 4.39 0.00 0.00 2.29
78 79 3.308401 GGGGGCCATAATTTTGAGATGT 58.692 45.455 4.39 0.00 0.00 3.06
96 97 1.051812 CTAGTGCATACTGGAGGGGG 58.948 60.000 0.00 0.00 37.58 5.40
97 98 1.414181 CACTAGTGCATACTGGAGGGG 59.586 57.143 10.54 0.00 37.58 4.79
98 99 1.414181 CCACTAGTGCATACTGGAGGG 59.586 57.143 17.86 0.00 40.70 4.30
99 100 2.111384 ACCACTAGTGCATACTGGAGG 58.889 52.381 17.86 2.16 46.59 4.30
100 101 3.895232 AACCACTAGTGCATACTGGAG 57.105 47.619 17.86 3.01 37.58 3.86
101 102 4.634012 AAAACCACTAGTGCATACTGGA 57.366 40.909 17.86 0.00 37.58 3.86
102 103 4.759693 TCAAAAACCACTAGTGCATACTGG 59.240 41.667 17.86 4.52 40.85 4.00
103 104 5.940192 TCAAAAACCACTAGTGCATACTG 57.060 39.130 17.86 10.98 37.78 2.74
104 105 6.296026 TCTTCAAAAACCACTAGTGCATACT 58.704 36.000 17.86 0.00 40.99 2.12
105 106 6.554334 TCTTCAAAAACCACTAGTGCATAC 57.446 37.500 17.86 0.00 0.00 2.39
106 107 7.880713 TGTATCTTCAAAAACCACTAGTGCATA 59.119 33.333 17.86 0.00 0.00 3.14
107 108 6.714810 TGTATCTTCAAAAACCACTAGTGCAT 59.285 34.615 17.86 4.67 0.00 3.96
108 109 6.058833 TGTATCTTCAAAAACCACTAGTGCA 58.941 36.000 17.86 1.83 0.00 4.57
109 110 6.554334 TGTATCTTCAAAAACCACTAGTGC 57.446 37.500 17.86 0.00 0.00 4.40
110 111 8.378172 TCTTGTATCTTCAAAAACCACTAGTG 57.622 34.615 16.34 16.34 0.00 2.74
113 114 9.444600 GGTATCTTGTATCTTCAAAAACCACTA 57.555 33.333 0.00 0.00 0.00 2.74
114 115 7.942341 TGGTATCTTGTATCTTCAAAAACCACT 59.058 33.333 0.00 0.00 33.07 4.00
115 116 8.106247 TGGTATCTTGTATCTTCAAAAACCAC 57.894 34.615 0.00 0.00 33.07 4.16
116 117 8.877864 ATGGTATCTTGTATCTTCAAAAACCA 57.122 30.769 0.00 0.00 37.58 3.67
121 122 9.443323 TCGAAAATGGTATCTTGTATCTTCAAA 57.557 29.630 0.00 0.00 0.00 2.69
122 123 9.443323 TTCGAAAATGGTATCTTGTATCTTCAA 57.557 29.630 0.00 0.00 0.00 2.69
123 124 9.613428 ATTCGAAAATGGTATCTTGTATCTTCA 57.387 29.630 0.00 0.00 0.00 3.02
138 139 9.715123 GGCCATAATTTTAAAATTCGAAAATGG 57.285 29.630 28.74 28.74 39.85 3.16
141 142 9.157104 GGAGGCCATAATTTTAAAATTCGAAAA 57.843 29.630 25.50 11.47 39.24 2.29
142 143 7.766738 GGGAGGCCATAATTTTAAAATTCGAAA 59.233 33.333 25.50 11.80 39.24 3.46
143 144 7.125053 AGGGAGGCCATAATTTTAAAATTCGAA 59.875 33.333 25.50 12.12 39.24 3.71
144 145 6.609616 AGGGAGGCCATAATTTTAAAATTCGA 59.390 34.615 25.50 12.77 39.24 3.71
145 146 6.816136 AGGGAGGCCATAATTTTAAAATTCG 58.184 36.000 25.50 18.36 39.24 3.34
146 147 7.147567 TGGAGGGAGGCCATAATTTTAAAATTC 60.148 37.037 25.50 13.55 39.24 2.17
147 148 6.676189 TGGAGGGAGGCCATAATTTTAAAATT 59.324 34.615 25.18 25.18 41.24 1.82
148 149 6.209026 TGGAGGGAGGCCATAATTTTAAAAT 58.791 36.000 5.01 7.64 0.00 1.82
149 150 5.594777 TGGAGGGAGGCCATAATTTTAAAA 58.405 37.500 5.01 2.51 0.00 1.52
150 151 5.208121 CTGGAGGGAGGCCATAATTTTAAA 58.792 41.667 5.01 0.00 34.33 1.52
151 152 4.231890 ACTGGAGGGAGGCCATAATTTTAA 59.768 41.667 5.01 0.00 34.33 1.52
152 153 3.791545 ACTGGAGGGAGGCCATAATTTTA 59.208 43.478 5.01 0.00 34.33 1.52
153 154 2.587307 ACTGGAGGGAGGCCATAATTTT 59.413 45.455 5.01 0.00 34.33 1.82
154 155 2.217776 ACTGGAGGGAGGCCATAATTT 58.782 47.619 5.01 0.00 34.33 1.82
155 156 1.912862 ACTGGAGGGAGGCCATAATT 58.087 50.000 5.01 0.00 34.33 1.40
156 157 2.815357 TACTGGAGGGAGGCCATAAT 57.185 50.000 5.01 0.00 34.33 1.28
157 158 2.338809 CATACTGGAGGGAGGCCATAA 58.661 52.381 5.01 0.00 34.33 1.90
158 159 1.223077 ACATACTGGAGGGAGGCCATA 59.777 52.381 5.01 0.00 34.33 2.74
159 160 0.029681 ACATACTGGAGGGAGGCCAT 60.030 55.000 5.01 0.00 34.33 4.40
160 161 0.982852 CACATACTGGAGGGAGGCCA 60.983 60.000 5.01 0.00 0.00 5.36
161 162 0.983378 ACACATACTGGAGGGAGGCC 60.983 60.000 0.00 0.00 0.00 5.19
162 163 1.413077 GTACACATACTGGAGGGAGGC 59.587 57.143 0.00 0.00 0.00 4.70
163 164 3.033659 AGTACACATACTGGAGGGAGG 57.966 52.381 0.00 0.00 40.32 4.30
164 165 4.023980 TCAAGTACACATACTGGAGGGAG 58.976 47.826 0.00 0.00 41.00 4.30
165 166 4.055710 TCAAGTACACATACTGGAGGGA 57.944 45.455 0.00 0.00 41.00 4.20
166 167 4.819105 TTCAAGTACACATACTGGAGGG 57.181 45.455 0.00 0.00 41.53 4.30
167 168 5.734720 ACATTCAAGTACACATACTGGAGG 58.265 41.667 0.00 0.00 41.53 4.30
168 169 7.387673 TGAAACATTCAAGTACACATACTGGAG 59.612 37.037 0.00 0.00 41.53 3.86
169 170 7.220740 TGAAACATTCAAGTACACATACTGGA 58.779 34.615 0.00 0.00 41.00 3.86
170 171 7.433708 TGAAACATTCAAGTACACATACTGG 57.566 36.000 0.00 0.00 41.00 4.00
192 193 9.613428 CACCTAGTAATATTGGTTCTTCATTGA 57.387 33.333 0.00 0.00 0.00 2.57
193 194 9.396022 ACACCTAGTAATATTGGTTCTTCATTG 57.604 33.333 0.00 0.00 0.00 2.82
194 195 9.396022 CACACCTAGTAATATTGGTTCTTCATT 57.604 33.333 0.00 0.00 0.00 2.57
195 196 8.768397 TCACACCTAGTAATATTGGTTCTTCAT 58.232 33.333 0.00 0.00 0.00 2.57
196 197 8.141298 TCACACCTAGTAATATTGGTTCTTCA 57.859 34.615 0.00 0.00 0.00 3.02
197 198 9.099454 CTTCACACCTAGTAATATTGGTTCTTC 57.901 37.037 0.00 0.00 0.00 2.87
198 199 8.047310 CCTTCACACCTAGTAATATTGGTTCTT 58.953 37.037 0.00 0.00 0.00 2.52
199 200 7.565680 CCTTCACACCTAGTAATATTGGTTCT 58.434 38.462 0.00 0.00 0.00 3.01
200 201 6.260271 GCCTTCACACCTAGTAATATTGGTTC 59.740 42.308 0.00 0.00 0.00 3.62
201 202 6.120220 GCCTTCACACCTAGTAATATTGGTT 58.880 40.000 0.00 0.00 0.00 3.67
202 203 5.190925 TGCCTTCACACCTAGTAATATTGGT 59.809 40.000 0.00 0.00 0.00 3.67
203 204 5.680619 TGCCTTCACACCTAGTAATATTGG 58.319 41.667 0.00 0.00 0.00 3.16
204 205 6.428159 GGATGCCTTCACACCTAGTAATATTG 59.572 42.308 0.00 0.00 0.00 1.90
205 206 6.101150 TGGATGCCTTCACACCTAGTAATATT 59.899 38.462 0.00 0.00 0.00 1.28
206 207 5.606749 TGGATGCCTTCACACCTAGTAATAT 59.393 40.000 0.00 0.00 0.00 1.28
207 208 4.966168 TGGATGCCTTCACACCTAGTAATA 59.034 41.667 0.00 0.00 0.00 0.98
208 209 3.780294 TGGATGCCTTCACACCTAGTAAT 59.220 43.478 0.00 0.00 0.00 1.89
209 210 3.178046 TGGATGCCTTCACACCTAGTAA 58.822 45.455 0.00 0.00 0.00 2.24
210 211 2.827755 TGGATGCCTTCACACCTAGTA 58.172 47.619 0.00 0.00 0.00 1.82
211 212 1.656587 TGGATGCCTTCACACCTAGT 58.343 50.000 0.00 0.00 0.00 2.57
212 213 2.437281 AGATGGATGCCTTCACACCTAG 59.563 50.000 0.00 0.00 31.13 3.02
213 214 2.435805 GAGATGGATGCCTTCACACCTA 59.564 50.000 0.00 0.00 31.13 3.08
214 215 1.211457 GAGATGGATGCCTTCACACCT 59.789 52.381 0.00 0.00 31.13 4.00
215 216 1.673168 GAGATGGATGCCTTCACACC 58.327 55.000 0.00 0.00 31.13 4.16
216 217 1.065199 TGGAGATGGATGCCTTCACAC 60.065 52.381 0.00 0.00 31.13 3.82
217 218 1.288188 TGGAGATGGATGCCTTCACA 58.712 50.000 0.00 0.00 31.13 3.58
218 219 2.425143 TTGGAGATGGATGCCTTCAC 57.575 50.000 0.00 0.00 31.13 3.18
219 220 3.454719 TTTTGGAGATGGATGCCTTCA 57.545 42.857 0.00 0.00 31.13 3.02
220 221 3.956199 TGATTTTGGAGATGGATGCCTTC 59.044 43.478 0.00 0.00 0.00 3.46
221 222 3.703052 GTGATTTTGGAGATGGATGCCTT 59.297 43.478 0.00 0.00 0.00 4.35
222 223 3.294214 GTGATTTTGGAGATGGATGCCT 58.706 45.455 0.00 0.00 0.00 4.75
223 224 2.033801 CGTGATTTTGGAGATGGATGCC 59.966 50.000 0.00 0.00 0.00 4.40
224 225 2.684881 ACGTGATTTTGGAGATGGATGC 59.315 45.455 0.00 0.00 0.00 3.91
225 226 3.940852 TCACGTGATTTTGGAGATGGATG 59.059 43.478 15.76 0.00 0.00 3.51
226 227 4.220693 TCACGTGATTTTGGAGATGGAT 57.779 40.909 15.76 0.00 0.00 3.41
227 228 3.694043 TCACGTGATTTTGGAGATGGA 57.306 42.857 15.76 0.00 0.00 3.41
228 229 4.970662 AATCACGTGATTTTGGAGATGG 57.029 40.909 32.82 0.00 41.64 3.51
254 255 9.201127 GAAGGTAGTCGACATAACTTTAAACTT 57.799 33.333 19.50 9.61 30.32 2.66
255 256 7.540055 CGAAGGTAGTCGACATAACTTTAAACT 59.460 37.037 19.50 1.87 43.86 2.66
256 257 7.660959 CGAAGGTAGTCGACATAACTTTAAAC 58.339 38.462 19.50 8.27 43.86 2.01
257 258 6.308766 GCGAAGGTAGTCGACATAACTTTAAA 59.691 38.462 19.50 0.00 43.86 1.52
258 259 5.801947 GCGAAGGTAGTCGACATAACTTTAA 59.198 40.000 19.50 0.00 43.86 1.52
259 260 5.335127 GCGAAGGTAGTCGACATAACTTTA 58.665 41.667 19.50 0.00 43.86 1.85
260 261 4.171754 GCGAAGGTAGTCGACATAACTTT 58.828 43.478 19.50 14.50 43.86 2.66
261 262 3.767278 GCGAAGGTAGTCGACATAACTT 58.233 45.455 19.50 19.15 43.86 2.66
262 263 3.417690 GCGAAGGTAGTCGACATAACT 57.582 47.619 19.50 12.02 43.86 2.24
269 270 1.303888 AGGTGGCGAAGGTAGTCGA 60.304 57.895 0.00 0.00 43.86 4.20
270 271 1.139095 GAGGTGGCGAAGGTAGTCG 59.861 63.158 0.00 0.00 43.98 4.18
271 272 0.824759 ATGAGGTGGCGAAGGTAGTC 59.175 55.000 0.00 0.00 0.00 2.59
272 273 2.154567 TATGAGGTGGCGAAGGTAGT 57.845 50.000 0.00 0.00 0.00 2.73
273 274 2.365617 ACATATGAGGTGGCGAAGGTAG 59.634 50.000 10.38 0.00 0.00 3.18
280 281 1.665679 GTTCACACATATGAGGTGGCG 59.334 52.381 22.74 6.94 40.54 5.69
318 321 9.702494 GACACTCACTTGATGATATCATTGATA 57.298 33.333 19.11 8.76 39.39 2.15
321 324 7.628235 GTGACACTCACTTGATGATATCATTG 58.372 38.462 19.11 13.14 43.73 2.82
322 325 7.783090 GTGACACTCACTTGATGATATCATT 57.217 36.000 19.11 0.67 43.73 2.57
337 340 5.877564 TGTGTAATCAAACTTGTGACACTCA 59.122 36.000 7.20 0.00 37.20 3.41
338 341 6.358118 TGTGTAATCAAACTTGTGACACTC 57.642 37.500 7.20 2.20 37.20 3.51
419 422 5.523916 CCATGTAACTTGTATTTCCCTCGAG 59.476 44.000 5.13 5.13 0.00 4.04
420 423 5.046159 ACCATGTAACTTGTATTTCCCTCGA 60.046 40.000 0.00 0.00 0.00 4.04
532 559 4.415596 AGGTGGCTGGTTCAATTGATTTA 58.584 39.130 9.40 0.00 0.00 1.40
583 612 5.132648 AGGTGGCTGGTTCAATATATTCTCA 59.867 40.000 0.00 0.00 0.00 3.27
615 672 0.109132 GGCTGGTTCAATTTGCCTCG 60.109 55.000 0.00 0.00 40.36 4.63
671 751 4.957684 TTCCTTCTCCTTCTTTCGTCTT 57.042 40.909 0.00 0.00 0.00 3.01
673 753 4.814771 TGTTTTCCTTCTCCTTCTTTCGTC 59.185 41.667 0.00 0.00 0.00 4.20
686 766 2.014857 GTAGGCCGGATGTTTTCCTTC 58.985 52.381 5.05 0.00 42.99 3.46
689 769 0.034863 TGGTAGGCCGGATGTTTTCC 60.035 55.000 5.05 0.00 41.59 3.13
696 776 1.213296 AGATTGTTGGTAGGCCGGAT 58.787 50.000 5.05 0.00 37.67 4.18
704 784 4.264172 ACTTTGGCCCATAGATTGTTGGTA 60.264 41.667 8.28 0.00 0.00 3.25
723 803 3.068165 GCTGTGGGCTTTAACTTGACTTT 59.932 43.478 0.00 0.00 38.06 2.66
734 814 2.033602 GTACGGGCTGTGGGCTTT 59.966 61.111 9.79 0.00 41.46 3.51
898 979 2.160417 GTCAAATCGAAGCACCAAGAGG 59.840 50.000 0.00 0.00 42.21 3.69
1028 1109 0.531090 ACACGCAGCTACGGTTTGAA 60.531 50.000 11.74 0.00 37.37 2.69
1029 1110 0.531090 AACACGCAGCTACGGTTTGA 60.531 50.000 11.74 0.00 37.37 2.69
1031 1112 1.938861 CAACACGCAGCTACGGTTT 59.061 52.632 11.74 0.00 37.37 3.27
1032 1113 2.604174 GCAACACGCAGCTACGGTT 61.604 57.895 11.74 9.09 41.79 4.44
1035 1116 0.722469 CAAAGCAACACGCAGCTACG 60.722 55.000 4.40 4.40 46.13 3.51
1040 1121 0.594796 GAACCCAAAGCAACACGCAG 60.595 55.000 0.00 0.00 46.13 5.18
1043 1124 1.002468 CTCAGAACCCAAAGCAACACG 60.002 52.381 0.00 0.00 0.00 4.49
1045 1126 2.575532 CTCTCAGAACCCAAAGCAACA 58.424 47.619 0.00 0.00 0.00 3.33
1046 1127 1.268079 GCTCTCAGAACCCAAAGCAAC 59.732 52.381 0.00 0.00 0.00 4.17
1057 1138 2.020720 GACATCTCTCGGCTCTCAGAA 58.979 52.381 0.00 0.00 0.00 3.02
1059 1140 1.603802 GAGACATCTCTCGGCTCTCAG 59.396 57.143 1.44 0.00 39.81 3.35
1060 1141 1.674359 GAGACATCTCTCGGCTCTCA 58.326 55.000 1.44 0.00 39.81 3.27
1077 1158 6.488344 TGGATCACATAGCTAACAGACTAGAG 59.512 42.308 0.00 0.00 0.00 2.43
1079 1160 6.641169 TGGATCACATAGCTAACAGACTAG 57.359 41.667 0.00 0.00 0.00 2.57
1080 1161 5.010112 GCTGGATCACATAGCTAACAGACTA 59.990 44.000 0.00 0.00 34.70 2.59
1090 1171 2.579873 ACCAATGCTGGATCACATAGC 58.420 47.619 0.00 0.00 46.92 2.97
1111 1192 5.105554 ACAACAGCAAACAAATTGACTGGTA 60.106 36.000 0.00 0.00 42.46 3.25
1112 1193 4.183101 CAACAGCAAACAAATTGACTGGT 58.817 39.130 0.00 0.00 42.46 4.00
1114 1195 4.033129 CCACAACAGCAAACAAATTGACTG 59.967 41.667 0.00 4.48 43.13 3.51
1132 1213 2.046023 CCAGATCAGCCGCCACAA 60.046 61.111 0.00 0.00 0.00 3.33
1149 1230 2.567664 AAATCCTAAGCACCGGGGGC 62.568 60.000 15.02 15.02 0.00 5.80
1150 1231 0.841289 TAAATCCTAAGCACCGGGGG 59.159 55.000 5.47 0.00 0.00 5.40
1153 1234 1.578583 CGGTAAATCCTAAGCACCGG 58.421 55.000 0.00 0.00 46.43 5.28
1173 1254 1.585521 CTAGTGGCTAACGACCGCG 60.586 63.158 0.00 0.00 42.69 6.46
1179 1260 5.050490 AGATACATTTGCTAGTGGCTAACG 58.950 41.667 0.00 0.00 42.39 3.18
1186 1267 6.934210 GGTACGAAAGATACATTTGCTAGTG 58.066 40.000 0.00 0.00 0.00 2.74
1230 1311 0.820871 AGAAAGCAACCGCAACCAAA 59.179 45.000 0.00 0.00 42.27 3.28
1236 1317 3.052455 TCTGATTAGAAAGCAACCGCA 57.948 42.857 0.00 0.00 42.27 5.69
1237 1318 4.419522 TTTCTGATTAGAAAGCAACCGC 57.580 40.909 8.50 0.00 45.46 5.68
1272 1353 6.483974 TCAGTGGTTACTCGAGCAAATAAAAA 59.516 34.615 13.61 0.00 34.07 1.94
1277 1360 3.678056 TCAGTGGTTACTCGAGCAAAT 57.322 42.857 13.61 0.00 34.07 2.32
1291 1374 1.763968 TCTACAGGACGGATCAGTGG 58.236 55.000 2.27 0.00 0.00 4.00
1334 1417 8.429493 TCTAGCAACTGACAAAATAGATGATG 57.571 34.615 0.00 0.00 0.00 3.07
1344 1427 7.168219 AGGAAATGTATCTAGCAACTGACAAA 58.832 34.615 0.00 0.00 0.00 2.83
1381 1464 3.545703 ACGAATTCATGGGTCTGATTCC 58.454 45.455 6.22 0.00 0.00 3.01
1405 1488 2.920384 TAGGGACAGCGTGGCACA 60.920 61.111 19.09 0.00 24.04 4.57
1406 1489 2.125512 CTAGGGACAGCGTGGCAC 60.126 66.667 7.79 7.79 0.00 5.01
1427 1510 3.384816 CATCCAATGCCGCTACAGA 57.615 52.632 0.00 0.00 0.00 3.41
1441 1524 5.006746 GCCGCTACACAAATATATAGCATCC 59.993 44.000 4.30 0.00 40.06 3.51
1528 1613 7.014615 ACAAACAGAAAGCCAAGATTTGATACT 59.985 33.333 0.00 0.00 31.59 2.12
1540 1625 1.234821 CGCCTACAAACAGAAAGCCA 58.765 50.000 0.00 0.00 0.00 4.75
1611 1697 6.076981 ACAGGTTCAACAAAATCTGATGTC 57.923 37.500 4.03 0.00 0.00 3.06
1636 1722 0.533491 AGCATGTTGCCAATTCGCAT 59.467 45.000 0.00 0.00 46.52 4.73
1645 1731 6.738114 TCAGCTAAATATAAAGCATGTTGCC 58.262 36.000 10.81 0.00 46.52 4.52
1706 1792 5.778542 AGGTCTAATAAGCTTGGAGGACTA 58.221 41.667 9.86 0.00 0.00 2.59
1727 1814 4.520492 AGGTTTGCAAGAAACATGTAGAGG 59.480 41.667 0.00 0.00 32.04 3.69
1730 1817 5.473504 ACCTAGGTTTGCAAGAAACATGTAG 59.526 40.000 9.21 0.00 32.04 2.74
1733 1820 4.278170 TGACCTAGGTTTGCAAGAAACATG 59.722 41.667 17.53 0.00 32.04 3.21
1734 1821 4.469657 TGACCTAGGTTTGCAAGAAACAT 58.530 39.130 17.53 0.00 32.04 2.71
1749 1836 7.865706 AAGGTGCTAATAAAACATGACCTAG 57.134 36.000 0.00 0.00 32.20 3.02
1766 1853 3.557264 GCTTCTGTAACTGGTAAGGTGCT 60.557 47.826 0.00 0.00 0.00 4.40
1825 1912 3.616956 TGGAGGAATCAGCAGTTAGTG 57.383 47.619 0.00 0.00 0.00 2.74
2126 2213 9.311916 CAAAACCATATTGAAGAACAAGAAACA 57.688 29.630 0.00 0.00 42.02 2.83
2152 2239 5.821204 ACAACTCATTCACTAAACACAAGC 58.179 37.500 0.00 0.00 0.00 4.01
2168 2256 7.815840 TTTGAATGATCAAGGTAACAACTCA 57.184 32.000 0.00 0.00 45.82 3.41
2169 2257 7.595130 GGTTTTGAATGATCAAGGTAACAACTC 59.405 37.037 0.00 0.00 45.82 3.01
2171 2259 6.645003 GGGTTTTGAATGATCAAGGTAACAAC 59.355 38.462 0.00 0.00 45.82 3.32
2287 2466 7.592938 TGATAAAACTAAGTGTTGCCAATGAG 58.407 34.615 0.00 0.00 39.13 2.90
2377 2556 5.252969 GCATCCAGCATTGATAACAAGAA 57.747 39.130 0.00 0.00 44.79 2.52
2470 2649 3.950395 ACTTCTTTGCAAGCTTCTTGACT 59.050 39.130 10.44 0.00 0.00 3.41
2539 2718 3.971305 TGTTAAGACCAGGTCCAAGAAGA 59.029 43.478 16.72 1.39 32.18 2.87
2780 3065 4.565962 CAGTGAGCTACTAAGATTGCACAG 59.434 45.833 0.00 0.00 37.60 3.66
2821 3106 4.135306 AGACATTATGCCAGCAAGAGATG 58.865 43.478 0.00 1.88 0.00 2.90
2881 3166 6.767456 AGTGCAAGGATGAATATAGAGGAAG 58.233 40.000 0.00 0.00 0.00 3.46
2882 3167 6.753913 AGTGCAAGGATGAATATAGAGGAA 57.246 37.500 0.00 0.00 0.00 3.36
2883 3168 6.753913 AAGTGCAAGGATGAATATAGAGGA 57.246 37.500 0.00 0.00 0.00 3.71
2884 3169 6.994496 TCAAAGTGCAAGGATGAATATAGAGG 59.006 38.462 0.00 0.00 0.00 3.69
2885 3170 7.172875 CCTCAAAGTGCAAGGATGAATATAGAG 59.827 40.741 0.00 0.00 31.44 2.43
2886 3171 6.994496 CCTCAAAGTGCAAGGATGAATATAGA 59.006 38.462 0.00 0.00 31.44 1.98
2913 3204 6.127647 CCAATGCTTTCTTCATAGGTAAGCAA 60.128 38.462 11.26 0.00 44.62 3.91
2988 3279 7.507616 TGTGGAATTTACATTTAGGGAACAAGT 59.492 33.333 0.00 0.00 0.00 3.16
3073 3364 1.363807 GTCTTGCCACAAACCCAGC 59.636 57.895 0.00 0.00 0.00 4.85
3090 3381 2.880443 TCAGACCAGTAAACCCTACGT 58.120 47.619 0.00 0.00 0.00 3.57
3092 3383 4.886496 ACTTCAGACCAGTAAACCCTAC 57.114 45.455 0.00 0.00 0.00 3.18
3182 3473 5.680619 CCAAAGTGTATGTATAGCCCTTCA 58.319 41.667 0.00 0.00 0.00 3.02
3188 3479 5.527214 TGACATGCCAAAGTGTATGTATAGC 59.473 40.000 0.00 0.00 34.18 2.97
3191 3482 6.377996 ACATTGACATGCCAAAGTGTATGTAT 59.622 34.615 1.67 0.00 34.18 2.29
3233 3524 3.624900 TGCATCATACGCTACGAAGTAC 58.375 45.455 0.00 0.00 45.11 2.73
3234 3525 3.974871 TGCATCATACGCTACGAAGTA 57.025 42.857 0.00 0.00 45.11 2.24
3236 3527 3.735746 TCATTGCATCATACGCTACGAAG 59.264 43.478 0.00 0.00 0.00 3.79
3237 3528 3.712187 TCATTGCATCATACGCTACGAA 58.288 40.909 0.00 0.00 0.00 3.85
3238 3529 3.308530 CTCATTGCATCATACGCTACGA 58.691 45.455 0.00 0.00 0.00 3.43
3239 3530 2.409715 CCTCATTGCATCATACGCTACG 59.590 50.000 0.00 0.00 0.00 3.51
3240 3531 2.158449 GCCTCATTGCATCATACGCTAC 59.842 50.000 0.00 0.00 0.00 3.58
3241 3532 2.224257 TGCCTCATTGCATCATACGCTA 60.224 45.455 0.00 0.00 36.04 4.26
3242 3533 1.233019 GCCTCATTGCATCATACGCT 58.767 50.000 0.00 0.00 0.00 5.07
3243 3534 0.946528 TGCCTCATTGCATCATACGC 59.053 50.000 0.00 0.00 36.04 4.42
3261 3552 9.800433 CTATAGTCCAGAAGATAGCAATGTATG 57.200 37.037 0.00 0.00 0.00 2.39
3262 3553 9.540538 ACTATAGTCCAGAAGATAGCAATGTAT 57.459 33.333 0.00 0.00 0.00 2.29
3263 3554 8.941995 ACTATAGTCCAGAAGATAGCAATGTA 57.058 34.615 0.00 0.00 0.00 2.29
3264 3555 7.847711 ACTATAGTCCAGAAGATAGCAATGT 57.152 36.000 0.00 0.00 0.00 2.71
3265 3556 9.019656 ACTACTATAGTCCAGAAGATAGCAATG 57.980 37.037 9.12 0.00 32.47 2.82
3268 3559 9.504708 GTTACTACTATAGTCCAGAAGATAGCA 57.495 37.037 9.12 0.00 40.14 3.49
3269 3560 9.729281 AGTTACTACTATAGTCCAGAAGATAGC 57.271 37.037 9.12 0.00 40.14 2.97
3286 3577 8.886719 GTGGAAAACAACACTAAAGTTACTACT 58.113 33.333 0.00 0.00 34.84 2.57
3287 3578 8.124823 GGTGGAAAACAACACTAAAGTTACTAC 58.875 37.037 0.00 0.00 36.56 2.73
3288 3579 8.048514 AGGTGGAAAACAACACTAAAGTTACTA 58.951 33.333 0.00 0.00 40.07 1.82
3289 3580 6.888088 AGGTGGAAAACAACACTAAAGTTACT 59.112 34.615 0.00 0.00 40.07 2.24
3290 3581 7.092137 AGGTGGAAAACAACACTAAAGTTAC 57.908 36.000 0.00 0.00 40.07 2.50
3291 3582 7.177041 ACAAGGTGGAAAACAACACTAAAGTTA 59.823 33.333 0.00 0.00 40.07 2.24
3292 3583 6.014925 ACAAGGTGGAAAACAACACTAAAGTT 60.015 34.615 0.00 0.00 40.07 2.66
3293 3584 5.479027 ACAAGGTGGAAAACAACACTAAAGT 59.521 36.000 0.00 0.00 40.07 2.66
3294 3585 5.961272 ACAAGGTGGAAAACAACACTAAAG 58.039 37.500 0.00 0.00 40.07 1.85
3295 3586 5.986501 ACAAGGTGGAAAACAACACTAAA 57.013 34.783 0.00 0.00 40.07 1.85
3296 3587 5.986501 AACAAGGTGGAAAACAACACTAA 57.013 34.783 0.00 0.00 40.07 2.24
3297 3588 6.181908 AGTAACAAGGTGGAAAACAACACTA 58.818 36.000 0.00 0.00 40.07 2.74
3298 3589 5.014202 AGTAACAAGGTGGAAAACAACACT 58.986 37.500 0.00 0.00 40.07 3.55
3299 3590 5.319140 AGTAACAAGGTGGAAAACAACAC 57.681 39.130 0.00 0.00 40.07 3.32
3300 3591 6.181908 AGTAGTAACAAGGTGGAAAACAACA 58.818 36.000 0.00 0.00 40.07 3.33
3301 3592 6.541278 AGAGTAGTAACAAGGTGGAAAACAAC 59.459 38.462 0.00 0.00 36.91 3.32
3302 3593 6.655930 AGAGTAGTAACAAGGTGGAAAACAA 58.344 36.000 0.00 0.00 0.00 2.83
3303 3594 6.243216 AGAGTAGTAACAAGGTGGAAAACA 57.757 37.500 0.00 0.00 0.00 2.83
3304 3595 6.017357 CCAAGAGTAGTAACAAGGTGGAAAAC 60.017 42.308 0.00 0.00 0.00 2.43
3305 3596 6.059484 CCAAGAGTAGTAACAAGGTGGAAAA 58.941 40.000 0.00 0.00 0.00 2.29
3306 3597 5.131475 ACCAAGAGTAGTAACAAGGTGGAAA 59.869 40.000 0.00 0.00 0.00 3.13
3307 3598 4.657039 ACCAAGAGTAGTAACAAGGTGGAA 59.343 41.667 0.00 0.00 0.00 3.53
3308 3599 4.228824 ACCAAGAGTAGTAACAAGGTGGA 58.771 43.478 0.00 0.00 0.00 4.02
3309 3600 4.618920 ACCAAGAGTAGTAACAAGGTGG 57.381 45.455 0.00 0.00 0.00 4.61
3310 3601 5.855045 AGAACCAAGAGTAGTAACAAGGTG 58.145 41.667 0.00 0.00 0.00 4.00
3311 3602 6.496144 AAGAACCAAGAGTAGTAACAAGGT 57.504 37.500 0.00 0.00 0.00 3.50
3312 3603 8.095169 ACATAAGAACCAAGAGTAGTAACAAGG 58.905 37.037 0.00 0.00 0.00 3.61
3313 3604 8.926710 CACATAAGAACCAAGAGTAGTAACAAG 58.073 37.037 0.00 0.00 0.00 3.16
3314 3605 7.876068 CCACATAAGAACCAAGAGTAGTAACAA 59.124 37.037 0.00 0.00 0.00 2.83
3315 3606 7.015877 ACCACATAAGAACCAAGAGTAGTAACA 59.984 37.037 0.00 0.00 0.00 2.41
3316 3607 7.384477 ACCACATAAGAACCAAGAGTAGTAAC 58.616 38.462 0.00 0.00 0.00 2.50
3317 3608 7.549147 ACCACATAAGAACCAAGAGTAGTAA 57.451 36.000 0.00 0.00 0.00 2.24
3318 3609 8.654485 TTACCACATAAGAACCAAGAGTAGTA 57.346 34.615 0.00 0.00 0.00 1.82
3319 3610 7.549147 TTACCACATAAGAACCAAGAGTAGT 57.451 36.000 0.00 0.00 0.00 2.73
3320 3611 8.258007 TGATTACCACATAAGAACCAAGAGTAG 58.742 37.037 0.00 0.00 0.00 2.57
3321 3612 8.141298 TGATTACCACATAAGAACCAAGAGTA 57.859 34.615 0.00 0.00 0.00 2.59
3322 3613 7.016153 TGATTACCACATAAGAACCAAGAGT 57.984 36.000 0.00 0.00 0.00 3.24
3323 3614 7.607991 AGTTGATTACCACATAAGAACCAAGAG 59.392 37.037 0.00 0.00 0.00 2.85
3324 3615 7.390440 CAGTTGATTACCACATAAGAACCAAGA 59.610 37.037 0.00 0.00 0.00 3.02
3325 3616 7.174946 ACAGTTGATTACCACATAAGAACCAAG 59.825 37.037 0.00 0.00 0.00 3.61
3326 3617 7.001674 ACAGTTGATTACCACATAAGAACCAA 58.998 34.615 0.00 0.00 0.00 3.67
3327 3618 6.539173 ACAGTTGATTACCACATAAGAACCA 58.461 36.000 0.00 0.00 0.00 3.67
3328 3619 7.448748 AACAGTTGATTACCACATAAGAACC 57.551 36.000 0.00 0.00 0.00 3.62
3329 3620 9.180678 CAAAACAGTTGATTACCACATAAGAAC 57.819 33.333 0.00 0.00 0.00 3.01
3330 3621 8.908903 ACAAAACAGTTGATTACCACATAAGAA 58.091 29.630 0.00 0.00 0.00 2.52
3331 3622 8.458573 ACAAAACAGTTGATTACCACATAAGA 57.541 30.769 0.00 0.00 0.00 2.10
3332 3623 9.528018 AAACAAAACAGTTGATTACCACATAAG 57.472 29.630 0.00 0.00 0.00 1.73
3335 3626 8.908903 TCTAAACAAAACAGTTGATTACCACAT 58.091 29.630 0.00 0.00 0.00 3.21
3336 3627 8.282455 TCTAAACAAAACAGTTGATTACCACA 57.718 30.769 0.00 0.00 0.00 4.17
3337 3628 9.744468 AATCTAAACAAAACAGTTGATTACCAC 57.256 29.630 0.00 0.00 28.35 4.16
3360 3651 8.851416 GCATCATACACTACGAAGTACATAATC 58.149 37.037 0.00 0.00 45.11 1.75
3361 3652 8.357402 TGCATCATACACTACGAAGTACATAAT 58.643 33.333 0.00 0.00 45.11 1.28
3362 3653 7.708998 TGCATCATACACTACGAAGTACATAA 58.291 34.615 0.00 0.00 45.11 1.90
3363 3654 7.266922 TGCATCATACACTACGAAGTACATA 57.733 36.000 0.00 0.00 45.11 2.29
3364 3655 6.144078 TGCATCATACACTACGAAGTACAT 57.856 37.500 0.00 0.00 45.11 2.29
3365 3656 5.570234 TGCATCATACACTACGAAGTACA 57.430 39.130 0.00 0.00 45.11 2.90
3420 3711 7.554835 TGTGGAAAACAACAGTTCAGTTACTAT 59.445 33.333 0.00 0.00 35.24 2.12
3453 3745 9.924650 GAGATTACCAAGTAAGAACAAGAGTAA 57.075 33.333 0.00 0.00 31.29 2.24
3469 3761 3.330701 ACTTTCCTGCAGGAGATTACCAA 59.669 43.478 33.16 21.85 46.36 3.67
3652 3944 3.253677 TCAACAGAGAGACGAGGAAGTTC 59.746 47.826 0.00 0.00 0.00 3.01
3712 4004 6.094186 TGTTGAAAATATTGTGCGCAGGTATA 59.906 34.615 12.22 9.48 0.00 1.47
3721 4013 6.578172 GCCAAATGTTGTTGAAAATATTGTGC 59.422 34.615 0.00 0.00 0.00 4.57
3735 4027 6.070653 ACCATCAATCAATAGCCAAATGTTGT 60.071 34.615 0.00 0.00 0.00 3.32
3786 4079 6.748333 TCTCACCTGCAAGAAATAAAGATG 57.252 37.500 0.00 0.00 34.07 2.90
3791 4084 4.592942 AGCATCTCACCTGCAAGAAATAA 58.407 39.130 0.00 0.00 42.15 1.40
3858 4152 6.068735 TCCTGGAAATCCTAGAAGACTAGAGT 60.069 42.308 0.00 0.00 46.34 3.24
3898 4193 9.248291 TGATAATTGAGAAAGCAACAAAAGTTC 57.752 29.630 0.00 0.00 0.00 3.01
4013 4309 1.604378 CAGTAGGAAGGCACAGGGG 59.396 63.158 0.00 0.00 0.00 4.79
4047 4343 3.521560 TCTAGCGTTAAACTGATGGCTG 58.478 45.455 0.00 0.00 32.29 4.85
4048 4344 3.887621 TCTAGCGTTAAACTGATGGCT 57.112 42.857 0.00 0.00 34.69 4.75
4049 4345 4.570772 TGAATCTAGCGTTAAACTGATGGC 59.429 41.667 0.00 0.00 0.00 4.40
4050 4346 5.277058 GCTGAATCTAGCGTTAAACTGATGG 60.277 44.000 0.00 0.00 33.46 3.51
4101 4397 7.094933 ACCAACACACGGTAAAATAAGATTCTC 60.095 37.037 0.00 0.00 34.02 2.87
4124 4420 2.169769 GGATACACCGAGATTCCAACCA 59.830 50.000 0.00 0.00 0.00 3.67
4125 4421 2.835027 GGATACACCGAGATTCCAACC 58.165 52.381 0.00 0.00 0.00 3.77
4152 4453 1.229951 TCCAAGGATCCCAGCAGGT 60.230 57.895 8.55 0.00 36.75 4.00
4286 4611 5.410924 TGATCAGGAACATCGTGTAGAAAG 58.589 41.667 0.00 0.00 34.22 2.62
4288 4613 5.400066 TTGATCAGGAACATCGTGTAGAA 57.600 39.130 0.00 0.00 34.22 2.10
4289 4614 5.400066 TTTGATCAGGAACATCGTGTAGA 57.600 39.130 0.00 0.00 34.22 2.59
4290 4615 6.668541 AATTTGATCAGGAACATCGTGTAG 57.331 37.500 0.00 0.00 34.22 2.74
4291 4616 7.447374 AAAATTTGATCAGGAACATCGTGTA 57.553 32.000 0.00 0.00 34.22 2.90
4306 4631 9.520204 CCGCACAAAGAGAATATAAAATTTGAT 57.480 29.630 0.00 0.00 33.14 2.57
4307 4632 8.519526 ACCGCACAAAGAGAATATAAAATTTGA 58.480 29.630 0.00 0.00 33.14 2.69
4308 4633 8.687824 ACCGCACAAAGAGAATATAAAATTTG 57.312 30.769 0.00 0.00 34.61 2.32
4309 4634 9.705290 AAACCGCACAAAGAGAATATAAAATTT 57.295 25.926 0.00 0.00 0.00 1.82
4325 4659 4.002906 ACTTATGAGAGAAACCGCACAA 57.997 40.909 0.00 0.00 0.00 3.33
4326 4660 3.678056 ACTTATGAGAGAAACCGCACA 57.322 42.857 0.00 0.00 0.00 4.57
4327 4661 3.060895 CGAACTTATGAGAGAAACCGCAC 59.939 47.826 0.00 0.00 0.00 5.34
4328 4662 3.250744 CGAACTTATGAGAGAAACCGCA 58.749 45.455 0.00 0.00 0.00 5.69
4329 4663 2.603560 CCGAACTTATGAGAGAAACCGC 59.396 50.000 0.00 0.00 0.00 5.68
4330 4664 3.846360 ACCGAACTTATGAGAGAAACCG 58.154 45.455 0.00 0.00 0.00 4.44
4331 4665 5.932883 AGAAACCGAACTTATGAGAGAAACC 59.067 40.000 0.00 0.00 0.00 3.27
4332 4666 6.424207 ACAGAAACCGAACTTATGAGAGAAAC 59.576 38.462 0.00 0.00 0.00 2.78
4333 4667 6.522054 ACAGAAACCGAACTTATGAGAGAAA 58.478 36.000 0.00 0.00 0.00 2.52
4334 4668 6.097915 ACAGAAACCGAACTTATGAGAGAA 57.902 37.500 0.00 0.00 0.00 2.87
4335 4669 5.723672 ACAGAAACCGAACTTATGAGAGA 57.276 39.130 0.00 0.00 0.00 3.10
4336 4670 6.423905 TGAAACAGAAACCGAACTTATGAGAG 59.576 38.462 0.00 0.00 0.00 3.20
4337 4671 6.285224 TGAAACAGAAACCGAACTTATGAGA 58.715 36.000 0.00 0.00 0.00 3.27
4338 4672 6.539649 TGAAACAGAAACCGAACTTATGAG 57.460 37.500 0.00 0.00 0.00 2.90
4339 4673 6.512741 GCTTGAAACAGAAACCGAACTTATGA 60.513 38.462 0.00 0.00 0.00 2.15
4348 4682 0.991770 CGCGCTTGAAACAGAAACCG 60.992 55.000 5.56 0.00 0.00 4.44
4367 4701 1.117150 TACTGGCCACGGAGTTATCC 58.883 55.000 0.00 0.00 41.61 2.59
4384 4718 3.280197 TTATAGCGGTTTGGGGGTTAC 57.720 47.619 0.00 0.00 0.00 2.50
4406 4740 3.117131 TCTGAGTAGGGATGGCTGATGTA 60.117 47.826 0.00 0.00 0.00 2.29
4410 4744 2.550277 TTCTGAGTAGGGATGGCTGA 57.450 50.000 0.00 0.00 0.00 4.26
4421 4755 3.553508 GGGTACGCTGTGTTTTCTGAGTA 60.554 47.826 0.00 0.00 0.00 2.59
4427 4761 1.467342 GATGGGGTACGCTGTGTTTTC 59.533 52.381 10.04 0.00 43.80 2.29
4436 4770 0.030369 CTAGTGACGATGGGGTACGC 59.970 60.000 0.29 0.29 43.69 4.42
4437 4771 0.030369 GCTAGTGACGATGGGGTACG 59.970 60.000 0.00 0.00 0.00 3.67
4438 4772 1.400737 AGCTAGTGACGATGGGGTAC 58.599 55.000 0.00 0.00 0.00 3.34
4439 4773 2.579873 GTAGCTAGTGACGATGGGGTA 58.420 52.381 0.00 0.00 0.00 3.69
4440 4774 1.400737 GTAGCTAGTGACGATGGGGT 58.599 55.000 0.00 0.00 0.00 4.95
4441 4775 0.674534 GGTAGCTAGTGACGATGGGG 59.325 60.000 0.00 0.00 0.00 4.96
4442 4776 0.311165 CGGTAGCTAGTGACGATGGG 59.689 60.000 0.00 0.00 0.00 4.00
4443 4777 1.306148 TCGGTAGCTAGTGACGATGG 58.694 55.000 0.00 0.00 0.00 3.51
4444 4778 2.095668 GGATCGGTAGCTAGTGACGATG 60.096 54.545 20.39 0.00 43.42 3.84
4445 4779 2.152830 GGATCGGTAGCTAGTGACGAT 58.847 52.381 17.26 17.26 45.70 3.73
4446 4780 1.590932 GGATCGGTAGCTAGTGACGA 58.409 55.000 10.79 10.79 38.00 4.20
4460 4804 2.124193 TTGCCATGGCTGGGATCG 60.124 61.111 35.53 0.00 43.16 3.69
4767 8516 4.507916 CCGCCGAGGGAGAGGAGA 62.508 72.222 0.00 0.00 35.97 3.71
4827 8576 0.620556 AGAGGTACATGGCAACCTGG 59.379 55.000 13.91 0.00 46.22 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.