Multiple sequence alignment - TraesCS3B01G404800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G404800 chr3B 100.000 9147 0 0 1 9147 640069234 640060088 0.000000e+00 16892.0
1 TraesCS3B01G404800 chr3B 99.824 569 1 0 6772 7340 389958162 389957594 0.000000e+00 1046.0
2 TraesCS3B01G404800 chr3D 89.751 4098 156 117 3 3953 479621260 479617280 0.000000e+00 4998.0
3 TraesCS3B01G404800 chr3D 92.048 1924 53 37 3974 5867 479616761 479614908 0.000000e+00 2614.0
4 TraesCS3B01G404800 chr3D 89.405 1850 111 39 7340 9145 479613929 479612121 0.000000e+00 2252.0
5 TraesCS3B01G404800 chr3D 92.949 851 39 11 5859 6692 479614887 479614041 0.000000e+00 1219.0
6 TraesCS3B01G404800 chr3D 92.308 52 4 0 3438 3489 606719071 606719122 3.540000e-09 75.0
7 TraesCS3B01G404800 chr3A 88.187 3547 150 115 287 3676 623054706 623051272 0.000000e+00 3980.0
8 TraesCS3B01G404800 chr3A 92.322 2201 73 31 3711 5867 623051269 623049121 0.000000e+00 3040.0
9 TraesCS3B01G404800 chr3A 93.008 1330 72 13 7340 8656 623048135 623046814 0.000000e+00 1921.0
10 TraesCS3B01G404800 chr3A 92.090 847 43 14 5859 6685 623049100 623048258 0.000000e+00 1171.0
11 TraesCS3B01G404800 chr3A 85.253 495 30 12 8673 9145 623040209 623039736 3.870000e-128 470.0
12 TraesCS3B01G404800 chr3A 86.316 190 13 6 1 187 623055101 623054922 2.610000e-45 195.0
13 TraesCS3B01G404800 chr4A 100.000 569 0 0 6772 7340 2224150 2224718 0.000000e+00 1051.0
14 TraesCS3B01G404800 chr4A 93.182 44 2 1 1793 1836 460897897 460897939 7.670000e-06 63.9
15 TraesCS3B01G404800 chr6B 99.824 569 1 0 6772 7340 606302693 606303261 0.000000e+00 1046.0
16 TraesCS3B01G404800 chr5B 99.824 569 1 0 6772 7340 48315708 48316276 0.000000e+00 1046.0
17 TraesCS3B01G404800 chr5B 92.593 54 4 0 3436 3489 633854722 633854669 2.740000e-10 78.7
18 TraesCS3B01G404800 chr5A 99.824 569 1 0 6772 7340 174601023 174601591 0.000000e+00 1046.0
19 TraesCS3B01G404800 chr4B 99.650 572 2 0 6772 7343 5373430 5372859 0.000000e+00 1046.0
20 TraesCS3B01G404800 chr4B 93.182 44 2 1 1793 1836 176260834 176260876 7.670000e-06 63.9
21 TraesCS3B01G404800 chr2A 99.824 569 1 0 6772 7340 518943644 518944212 0.000000e+00 1046.0
22 TraesCS3B01G404800 chr2A 99.824 569 1 0 6772 7340 676079074 676079642 0.000000e+00 1046.0
23 TraesCS3B01G404800 chr1B 99.824 569 1 0 6772 7340 451911025 451910457 0.000000e+00 1046.0
24 TraesCS3B01G404800 chrUn 95.556 45 2 0 3445 3489 40885585 40885629 1.270000e-08 73.1
25 TraesCS3B01G404800 chr1A 85.484 62 9 0 2414 2475 471696597 471696658 2.130000e-06 65.8
26 TraesCS3B01G404800 chr4D 97.222 36 1 0 1804 1839 115939213 115939178 2.760000e-05 62.1
27 TraesCS3B01G404800 chr7D 94.286 35 1 1 3017 3051 506505672 506505639 1.700000e-02 52.8
28 TraesCS3B01G404800 chr7B 94.286 35 1 1 3017 3051 534543419 534543386 1.700000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G404800 chr3B 640060088 640069234 9146 True 16892.00 16892 100.00000 1 9147 1 chr3B.!!$R2 9146
1 TraesCS3B01G404800 chr3B 389957594 389958162 568 True 1046.00 1046 99.82400 6772 7340 1 chr3B.!!$R1 568
2 TraesCS3B01G404800 chr3D 479612121 479621260 9139 True 2770.75 4998 91.03825 3 9145 4 chr3D.!!$R1 9142
3 TraesCS3B01G404800 chr3A 623046814 623055101 8287 True 2061.40 3980 90.38460 1 8656 5 chr3A.!!$R2 8655
4 TraesCS3B01G404800 chr4A 2224150 2224718 568 False 1051.00 1051 100.00000 6772 7340 1 chr4A.!!$F1 568
5 TraesCS3B01G404800 chr6B 606302693 606303261 568 False 1046.00 1046 99.82400 6772 7340 1 chr6B.!!$F1 568
6 TraesCS3B01G404800 chr5B 48315708 48316276 568 False 1046.00 1046 99.82400 6772 7340 1 chr5B.!!$F1 568
7 TraesCS3B01G404800 chr5A 174601023 174601591 568 False 1046.00 1046 99.82400 6772 7340 1 chr5A.!!$F1 568
8 TraesCS3B01G404800 chr4B 5372859 5373430 571 True 1046.00 1046 99.65000 6772 7343 1 chr4B.!!$R1 571
9 TraesCS3B01G404800 chr2A 518943644 518944212 568 False 1046.00 1046 99.82400 6772 7340 1 chr2A.!!$F1 568
10 TraesCS3B01G404800 chr2A 676079074 676079642 568 False 1046.00 1046 99.82400 6772 7340 1 chr2A.!!$F2 568
11 TraesCS3B01G404800 chr1B 451910457 451911025 568 True 1046.00 1046 99.82400 6772 7340 1 chr1B.!!$R1 568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
245 383 0.037303 CAGCCCCTCTGTGTGTCAAT 59.963 55.000 0.00 0.00 38.02 2.57 F
586 750 0.172352 CTCTTCGGTCAGTCCAGCTC 59.828 60.000 0.00 0.00 35.57 4.09 F
1269 1509 0.107606 AGCTCAGCTCATGCAAGAGG 60.108 55.000 19.77 5.10 41.07 3.69 F
1270 1510 0.107800 GCTCAGCTCATGCAAGAGGA 60.108 55.000 19.77 9.03 41.07 3.71 F
1588 1856 0.546598 CTCCCCGGCCTCATACTTTT 59.453 55.000 0.00 0.00 0.00 2.27 F
2144 2460 0.736325 CATGTCGTCGTCCTTGGGTC 60.736 60.000 0.00 0.00 0.00 4.46 F
3598 4005 1.153349 GAGGGAACAGCCGGATGTC 60.153 63.158 28.00 18.64 37.63 3.06 F
4015 4942 0.459237 CCTGTTCTCTGTAGCTGCCG 60.459 60.000 0.00 0.00 0.00 5.69 F
5194 6146 1.011968 CGAACGGCGTCCATGAAGAA 61.012 55.000 15.17 0.00 34.64 2.52 F
5257 6221 0.106708 CTAGAAGCCGGCTTGCCATA 59.893 55.000 44.71 27.37 36.26 2.74 F
6362 7379 0.321298 GGTGGATACCGTGTTGCTGT 60.321 55.000 0.00 0.00 37.19 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1183 1415 0.189574 TTGCAAGGGAAATGGGTGGA 59.810 50.000 0.00 0.00 0.00 4.02 R
1605 1873 0.384309 CCGCGCTGGACAGATAAGTA 59.616 55.000 12.11 0.00 42.00 2.24 R
3189 3558 0.099436 GCGCTAACTCCTTTGGCATG 59.901 55.000 0.00 0.00 41.73 4.06 R
3190 3559 0.322456 TGCGCTAACTCCTTTGGCAT 60.322 50.000 9.73 0.00 41.73 4.40 R
3195 3564 0.685097 TGTCCTGCGCTAACTCCTTT 59.315 50.000 9.73 0.00 0.00 3.11 R
3634 4044 0.104855 GGTGCAGCATCGACCAGATA 59.895 55.000 11.86 0.00 37.52 1.98 R
5108 6056 0.324738 TGACCTTGAGGAGCTCGGAT 60.325 55.000 7.83 0.00 38.94 4.18 R
5219 6183 1.248785 GCCTCAGTCAGTACGGGACA 61.249 60.000 18.73 3.15 37.74 4.02 R
6322 7339 0.321671 TTCTTCAAGGCTCCTGTCCG 59.678 55.000 0.00 0.00 0.00 4.79 R
6508 7527 4.104776 CACAAACCGCAATCAACATATCC 58.895 43.478 0.00 0.00 0.00 2.59 R
8149 9193 0.537653 GTTACACCCTCCAGGAGAGC 59.462 60.000 19.21 0.00 41.74 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 26 1.937108 GCACAGAGAAGACAAGTCCCG 60.937 57.143 0.00 0.00 0.00 5.14
30 33 2.171870 AGAAGACAAGTCCCGAAACCAA 59.828 45.455 0.00 0.00 0.00 3.67
57 60 2.124901 CATGCGCCCCCGAAACTA 60.125 61.111 4.18 0.00 36.29 2.24
168 173 1.079127 CTGGTTAGGAGTGGCCACG 60.079 63.158 29.68 8.74 40.02 4.94
202 340 4.641989 AGAATTGTTGGTGATATGTGGAGC 59.358 41.667 0.00 0.00 0.00 4.70
208 346 1.000283 GGTGATATGTGGAGCGAGAGG 60.000 57.143 0.00 0.00 0.00 3.69
235 373 2.206576 GTTGACAAATCAGCCCCTCT 57.793 50.000 0.00 0.00 35.83 3.69
236 374 1.815003 GTTGACAAATCAGCCCCTCTG 59.185 52.381 0.00 0.00 44.21 3.35
237 375 1.067295 TGACAAATCAGCCCCTCTGT 58.933 50.000 0.00 0.00 43.32 3.41
238 376 1.271543 TGACAAATCAGCCCCTCTGTG 60.272 52.381 0.00 0.00 43.32 3.66
239 377 0.773644 ACAAATCAGCCCCTCTGTGT 59.226 50.000 0.00 0.00 43.32 3.72
240 378 1.171308 CAAATCAGCCCCTCTGTGTG 58.829 55.000 0.00 0.00 43.32 3.82
241 379 0.773644 AAATCAGCCCCTCTGTGTGT 59.226 50.000 0.00 0.00 43.32 3.72
242 380 0.326264 AATCAGCCCCTCTGTGTGTC 59.674 55.000 0.00 0.00 43.32 3.67
243 381 0.837691 ATCAGCCCCTCTGTGTGTCA 60.838 55.000 0.00 0.00 43.32 3.58
244 382 1.053835 TCAGCCCCTCTGTGTGTCAA 61.054 55.000 0.00 0.00 43.32 3.18
245 383 0.037303 CAGCCCCTCTGTGTGTCAAT 59.963 55.000 0.00 0.00 38.02 2.57
246 384 0.037303 AGCCCCTCTGTGTGTCAATG 59.963 55.000 0.00 0.00 0.00 2.82
247 385 0.250901 GCCCCTCTGTGTGTCAATGT 60.251 55.000 0.00 0.00 0.00 2.71
248 386 1.527034 CCCCTCTGTGTGTCAATGTG 58.473 55.000 0.00 0.00 0.00 3.21
249 387 1.202806 CCCCTCTGTGTGTCAATGTGT 60.203 52.381 0.00 0.00 0.00 3.72
250 388 2.146342 CCCTCTGTGTGTCAATGTGTC 58.854 52.381 0.00 0.00 0.00 3.67
251 389 2.224378 CCCTCTGTGTGTCAATGTGTCT 60.224 50.000 0.00 0.00 0.00 3.41
252 390 3.062763 CCTCTGTGTGTCAATGTGTCTC 58.937 50.000 0.00 0.00 0.00 3.36
253 391 3.244009 CCTCTGTGTGTCAATGTGTCTCT 60.244 47.826 0.00 0.00 0.00 3.10
254 392 3.982475 TCTGTGTGTCAATGTGTCTCTC 58.018 45.455 0.00 0.00 0.00 3.20
255 393 3.062763 CTGTGTGTCAATGTGTCTCTCC 58.937 50.000 0.00 0.00 0.00 3.71
256 394 2.224281 TGTGTGTCAATGTGTCTCTCCC 60.224 50.000 0.00 0.00 0.00 4.30
257 395 2.046292 TGTGTCAATGTGTCTCTCCCA 58.954 47.619 0.00 0.00 0.00 4.37
258 396 2.037641 TGTGTCAATGTGTCTCTCCCAG 59.962 50.000 0.00 0.00 0.00 4.45
259 397 2.037772 GTGTCAATGTGTCTCTCCCAGT 59.962 50.000 0.00 0.00 0.00 4.00
260 398 2.300152 TGTCAATGTGTCTCTCCCAGTC 59.700 50.000 0.00 0.00 0.00 3.51
261 399 2.564947 GTCAATGTGTCTCTCCCAGTCT 59.435 50.000 0.00 0.00 0.00 3.24
262 400 2.828520 TCAATGTGTCTCTCCCAGTCTC 59.171 50.000 0.00 0.00 0.00 3.36
263 401 2.830923 CAATGTGTCTCTCCCAGTCTCT 59.169 50.000 0.00 0.00 0.00 3.10
264 402 2.208132 TGTGTCTCTCCCAGTCTCTC 57.792 55.000 0.00 0.00 0.00 3.20
265 403 1.707989 TGTGTCTCTCCCAGTCTCTCT 59.292 52.381 0.00 0.00 0.00 3.10
266 404 2.290641 TGTGTCTCTCCCAGTCTCTCTC 60.291 54.545 0.00 0.00 0.00 3.20
289 427 3.010027 TCTCTCTCTCTCTGCTTTCAGGA 59.990 47.826 0.00 0.00 40.69 3.86
290 428 3.355378 TCTCTCTCTCTGCTTTCAGGAG 58.645 50.000 0.00 0.00 40.69 3.69
291 429 3.010027 TCTCTCTCTCTGCTTTCAGGAGA 59.990 47.826 10.68 10.68 40.52 3.71
292 430 3.763360 CTCTCTCTCTGCTTTCAGGAGAA 59.237 47.826 11.64 0.00 42.21 2.87
293 431 4.352009 TCTCTCTCTGCTTTCAGGAGAAT 58.648 43.478 11.64 0.00 42.21 2.40
297 435 6.135454 TCTCTCTGCTTTCAGGAGAATAGAT 58.865 40.000 9.46 0.00 42.21 1.98
299 437 7.448161 TCTCTCTGCTTTCAGGAGAATAGATAG 59.552 40.741 9.46 0.00 42.21 2.08
300 438 7.293828 TCTCTGCTTTCAGGAGAATAGATAGA 58.706 38.462 0.00 0.00 42.21 1.98
301 439 7.949565 TCTCTGCTTTCAGGAGAATAGATAGAT 59.050 37.037 0.00 0.00 42.21 1.98
523 687 0.405585 AGCAAAGGCCTACCACACAT 59.594 50.000 5.16 0.00 42.56 3.21
525 689 2.242196 AGCAAAGGCCTACCACACATAT 59.758 45.455 5.16 0.00 42.56 1.78
526 690 2.618709 GCAAAGGCCTACCACACATATC 59.381 50.000 5.16 0.00 39.06 1.63
527 691 3.685550 GCAAAGGCCTACCACACATATCT 60.686 47.826 5.16 0.00 39.06 1.98
528 692 4.130118 CAAAGGCCTACCACACATATCTC 58.870 47.826 5.16 0.00 39.06 2.75
529 693 3.336509 AGGCCTACCACACATATCTCT 57.663 47.619 1.29 0.00 39.06 3.10
530 694 3.235200 AGGCCTACCACACATATCTCTC 58.765 50.000 1.29 0.00 39.06 3.20
531 695 3.116939 AGGCCTACCACACATATCTCTCT 60.117 47.826 1.29 0.00 39.06 3.10
532 696 3.643792 GGCCTACCACACATATCTCTCTT 59.356 47.826 0.00 0.00 35.26 2.85
533 697 4.262249 GGCCTACCACACATATCTCTCTTC 60.262 50.000 0.00 0.00 35.26 2.87
534 698 4.586841 GCCTACCACACATATCTCTCTTCT 59.413 45.833 0.00 0.00 0.00 2.85
536 700 6.068010 CCTACCACACATATCTCTCTTCTCT 58.932 44.000 0.00 0.00 0.00 3.10
538 702 5.765510 ACCACACATATCTCTCTTCTCTCT 58.234 41.667 0.00 0.00 0.00 3.10
539 703 5.827797 ACCACACATATCTCTCTTCTCTCTC 59.172 44.000 0.00 0.00 0.00 3.20
540 704 6.064060 CCACACATATCTCTCTTCTCTCTCT 58.936 44.000 0.00 0.00 0.00 3.10
541 705 6.205464 CCACACATATCTCTCTTCTCTCTCTC 59.795 46.154 0.00 0.00 0.00 3.20
542 706 6.994496 CACACATATCTCTCTTCTCTCTCTCT 59.006 42.308 0.00 0.00 0.00 3.10
543 707 8.150296 CACACATATCTCTCTTCTCTCTCTCTA 58.850 40.741 0.00 0.00 0.00 2.43
544 708 8.884323 ACACATATCTCTCTTCTCTCTCTCTAT 58.116 37.037 0.00 0.00 0.00 1.98
545 709 9.376075 CACATATCTCTCTTCTCTCTCTCTATC 57.624 40.741 0.00 0.00 0.00 2.08
546 710 9.331466 ACATATCTCTCTTCTCTCTCTCTATCT 57.669 37.037 0.00 0.00 0.00 1.98
554 718 8.375493 TCTTCTCTCTCTCTATCTATACCTCC 57.625 42.308 0.00 0.00 0.00 4.30
555 719 7.959152 TCTTCTCTCTCTCTATCTATACCTCCA 59.041 40.741 0.00 0.00 0.00 3.86
575 739 3.292460 CATCTCTCTAACCCTCTTCGGT 58.708 50.000 0.00 0.00 37.93 4.69
586 750 0.172352 CTCTTCGGTCAGTCCAGCTC 59.828 60.000 0.00 0.00 35.57 4.09
587 751 0.251386 TCTTCGGTCAGTCCAGCTCT 60.251 55.000 0.00 0.00 35.57 4.09
589 753 0.539669 TTCGGTCAGTCCAGCTCTCA 60.540 55.000 0.00 0.00 35.57 3.27
590 754 1.214062 CGGTCAGTCCAGCTCTCAC 59.786 63.158 0.00 0.00 35.57 3.51
591 755 1.527433 CGGTCAGTCCAGCTCTCACA 61.527 60.000 0.00 0.00 35.57 3.58
593 757 0.676184 GTCAGTCCAGCTCTCACACA 59.324 55.000 0.00 0.00 0.00 3.72
594 758 0.964700 TCAGTCCAGCTCTCACACAG 59.035 55.000 0.00 0.00 0.00 3.66
596 760 0.965439 AGTCCAGCTCTCACACAGAC 59.035 55.000 0.00 0.00 0.00 3.51
597 761 0.965439 GTCCAGCTCTCACACAGACT 59.035 55.000 0.00 0.00 0.00 3.24
598 762 1.067915 GTCCAGCTCTCACACAGACTC 60.068 57.143 0.00 0.00 0.00 3.36
599 763 1.202989 TCCAGCTCTCACACAGACTCT 60.203 52.381 0.00 0.00 0.00 3.24
804 1010 6.837048 TCCCATCACTCATTCATTCATTCATT 59.163 34.615 0.00 0.00 0.00 2.57
805 1011 7.013942 TCCCATCACTCATTCATTCATTCATTC 59.986 37.037 0.00 0.00 0.00 2.67
806 1012 7.201875 CCCATCACTCATTCATTCATTCATTCA 60.202 37.037 0.00 0.00 0.00 2.57
807 1013 8.360390 CCATCACTCATTCATTCATTCATTCAT 58.640 33.333 0.00 0.00 0.00 2.57
828 1034 0.185901 CCCCCTCCTCTCTCTCTCTG 59.814 65.000 0.00 0.00 0.00 3.35
829 1035 0.468029 CCCCTCCTCTCTCTCTCTGC 60.468 65.000 0.00 0.00 0.00 4.26
830 1036 0.468029 CCCTCCTCTCTCTCTCTGCC 60.468 65.000 0.00 0.00 0.00 4.85
831 1037 0.552848 CCTCCTCTCTCTCTCTGCCT 59.447 60.000 0.00 0.00 0.00 4.75
893 1099 3.779444 TGTACACATGTTCTCTCCCTCT 58.221 45.455 0.00 0.00 0.00 3.69
895 1101 2.183679 ACACATGTTCTCTCCCTCTCC 58.816 52.381 0.00 0.00 0.00 3.71
904 1110 1.421646 CTCTCCCTCTCCCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
905 1111 1.010793 TCTCCCTCTCCCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
906 1112 1.421646 CTCCCTCTCCCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
907 1113 1.010793 TCCCTCTCCCTCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
908 1114 1.143684 CCCTCTCCCTCTCTCTCTCTG 59.856 61.905 0.00 0.00 0.00 3.35
909 1115 1.143684 CCTCTCCCTCTCTCTCTCTGG 59.856 61.905 0.00 0.00 0.00 3.86
1026 1255 3.386237 GGTGAGGAGGCGAGCTGT 61.386 66.667 0.00 0.00 0.00 4.40
1041 1270 1.450312 CTGTTCGTGGAGGATGGCC 60.450 63.158 0.00 0.00 0.00 5.36
1181 1413 0.393132 GCCAGCTTCTTGTACTCCCC 60.393 60.000 0.00 0.00 0.00 4.81
1183 1415 1.280457 CAGCTTCTTGTACTCCCCCT 58.720 55.000 0.00 0.00 0.00 4.79
1185 1417 0.542333 GCTTCTTGTACTCCCCCTCC 59.458 60.000 0.00 0.00 0.00 4.30
1186 1418 1.952621 CTTCTTGTACTCCCCCTCCA 58.047 55.000 0.00 0.00 0.00 3.86
1190 1422 2.051050 TTGTACTCCCCCTCCACCCA 62.051 60.000 0.00 0.00 0.00 4.51
1191 1423 1.004361 GTACTCCCCCTCCACCCAT 59.996 63.158 0.00 0.00 0.00 4.00
1193 1425 0.122435 TACTCCCCCTCCACCCATTT 59.878 55.000 0.00 0.00 0.00 2.32
1194 1426 1.214992 ACTCCCCCTCCACCCATTTC 61.215 60.000 0.00 0.00 0.00 2.17
1195 1427 1.933812 TCCCCCTCCACCCATTTCC 60.934 63.158 0.00 0.00 0.00 3.13
1198 1430 1.518431 CCCCTCCACCCATTTCCCTT 61.518 60.000 0.00 0.00 0.00 3.95
1199 1431 0.324645 CCCTCCACCCATTTCCCTTG 60.325 60.000 0.00 0.00 0.00 3.61
1200 1432 0.972471 CCTCCACCCATTTCCCTTGC 60.972 60.000 0.00 0.00 0.00 4.01
1201 1433 0.251742 CTCCACCCATTTCCCTTGCA 60.252 55.000 0.00 0.00 0.00 4.08
1205 1445 2.040145 CCACCCATTTCCCTTGCAAAAT 59.960 45.455 0.00 0.00 0.00 1.82
1206 1446 3.498301 CCACCCATTTCCCTTGCAAAATT 60.498 43.478 0.00 0.00 0.00 1.82
1211 1451 5.068855 CCCATTTCCCTTGCAAAATTTTTGT 59.931 36.000 19.98 0.00 0.00 2.83
1266 1506 1.584175 CCTAGCTCAGCTCATGCAAG 58.416 55.000 0.00 0.00 40.44 4.01
1267 1507 1.138464 CCTAGCTCAGCTCATGCAAGA 59.862 52.381 0.00 0.00 40.44 3.02
1268 1508 2.475818 CTAGCTCAGCTCATGCAAGAG 58.524 52.381 14.55 14.55 42.52 2.85
1269 1509 0.107606 AGCTCAGCTCATGCAAGAGG 60.108 55.000 19.77 5.10 41.07 3.69
1270 1510 0.107800 GCTCAGCTCATGCAAGAGGA 60.108 55.000 19.77 9.03 41.07 3.71
1274 1526 0.990374 AGCTCATGCAAGAGGACCTT 59.010 50.000 19.77 0.00 42.74 3.50
1314 1566 3.131046 ACCAGACCAACTTTTTCTTGCAG 59.869 43.478 0.00 0.00 0.00 4.41
1349 1604 2.688666 CCTCAGTGGGCAGGGCTA 60.689 66.667 0.00 0.00 0.00 3.93
1350 1605 2.586792 CTCAGTGGGCAGGGCTAC 59.413 66.667 0.97 0.97 0.00 3.58
1352 1607 1.538876 TCAGTGGGCAGGGCTACTT 60.539 57.895 9.12 0.00 0.00 2.24
1353 1608 1.377725 CAGTGGGCAGGGCTACTTG 60.378 63.158 9.12 2.51 0.00 3.16
1428 1690 9.362151 TCCATCCATCTTTTTAACAAACTTACT 57.638 29.630 0.00 0.00 0.00 2.24
1429 1691 9.981114 CCATCCATCTTTTTAACAAACTTACTT 57.019 29.630 0.00 0.00 0.00 2.24
1538 1806 2.381911 CCTAAGGCCTGAACCGTACTA 58.618 52.381 5.69 0.00 33.69 1.82
1585 1853 2.122813 CCTCCCCGGCCTCATACT 60.123 66.667 0.00 0.00 0.00 2.12
1586 1854 1.766461 CCTCCCCGGCCTCATACTT 60.766 63.158 0.00 0.00 0.00 2.24
1587 1855 1.345715 CCTCCCCGGCCTCATACTTT 61.346 60.000 0.00 0.00 0.00 2.66
1588 1856 0.546598 CTCCCCGGCCTCATACTTTT 59.453 55.000 0.00 0.00 0.00 2.27
1589 1857 0.996583 TCCCCGGCCTCATACTTTTT 59.003 50.000 0.00 0.00 0.00 1.94
1696 1967 9.920946 TTTATCCTGTTTGATTTCCTATAGCTT 57.079 29.630 0.00 0.00 0.00 3.74
1726 1997 4.798907 CACAGTAAGTTGGCGTATCAGTAG 59.201 45.833 0.00 0.00 0.00 2.57
1943 2223 2.678336 AGTGTAAGCTACGTACGTACCC 59.322 50.000 23.60 16.67 0.00 3.69
1944 2224 2.678336 GTGTAAGCTACGTACGTACCCT 59.322 50.000 23.60 18.48 0.00 4.34
1945 2225 3.127030 GTGTAAGCTACGTACGTACCCTT 59.873 47.826 26.54 26.54 0.00 3.95
1969 2249 4.908601 TCTTCTTCTTCCATGCACCTTA 57.091 40.909 0.00 0.00 0.00 2.69
2008 2302 1.036481 TGGTTTGCTGCTGTTGCTCA 61.036 50.000 0.00 0.00 40.48 4.26
2144 2460 0.736325 CATGTCGTCGTCCTTGGGTC 60.736 60.000 0.00 0.00 0.00 4.46
2165 2481 1.229529 GTTGACCTCCCCTCCTCCA 60.230 63.158 0.00 0.00 0.00 3.86
2182 2511 2.742372 ATCCGTCGCCAACAGTGC 60.742 61.111 0.00 0.00 0.00 4.40
2245 2574 4.035675 GCTACAGCTTTCTCTCTCTCTCTC 59.964 50.000 0.00 0.00 38.21 3.20
2246 2575 4.307032 ACAGCTTTCTCTCTCTCTCTCT 57.693 45.455 0.00 0.00 0.00 3.10
2247 2576 4.012374 ACAGCTTTCTCTCTCTCTCTCTG 58.988 47.826 0.00 0.00 0.00 3.35
2248 2577 3.379372 CAGCTTTCTCTCTCTCTCTCTGG 59.621 52.174 0.00 0.00 0.00 3.86
2249 2578 3.010584 AGCTTTCTCTCTCTCTCTCTGGT 59.989 47.826 0.00 0.00 0.00 4.00
2250 2579 4.227300 AGCTTTCTCTCTCTCTCTCTGGTA 59.773 45.833 0.00 0.00 0.00 3.25
2251 2580 4.947388 GCTTTCTCTCTCTCTCTCTGGTAA 59.053 45.833 0.00 0.00 0.00 2.85
2255 2584 2.512056 TCTCTCTCTCTCTGGTAAGGGG 59.488 54.545 0.00 0.00 0.00 4.79
2274 2603 1.569072 GGGGAAGAGAGAGAGAGAGGT 59.431 57.143 0.00 0.00 0.00 3.85
2275 2604 2.422945 GGGGAAGAGAGAGAGAGAGGTC 60.423 59.091 0.00 0.00 0.00 3.85
2276 2605 2.422945 GGGAAGAGAGAGAGAGAGGTCC 60.423 59.091 0.00 0.00 0.00 4.46
2282 2611 4.824515 AGAGAGAGGTCCGGCCGG 62.825 72.222 39.13 39.13 43.70 6.13
2307 2636 1.556591 CGCACGAACAGCTGTTAGCA 61.557 55.000 32.40 0.00 45.56 3.49
2455 2797 1.521681 GATCTTCCCTTCGTGGCCG 60.522 63.158 0.00 0.00 0.00 6.13
2537 2879 3.243636 CCCATGCATTAATTCACTGGCTC 60.244 47.826 0.00 0.00 0.00 4.70
2947 3310 2.939103 GTGACCACTGATGATTACAGCC 59.061 50.000 0.00 0.00 38.74 4.85
2967 3330 4.682714 AAGCCAGGCCTCCCTCCA 62.683 66.667 8.22 0.00 40.33 3.86
3018 3381 2.623915 AAGCTTTCAGCAGCCGCAG 61.624 57.895 0.00 0.00 45.56 5.18
3117 3486 9.973661 TTCTTGACCTTTTCCTATCAATCATAA 57.026 29.630 0.00 0.00 31.00 1.90
3121 3490 9.919416 TGACCTTTTCCTATCAATCATAATTCA 57.081 29.630 0.00 0.00 0.00 2.57
3123 3492 9.927081 ACCTTTTCCTATCAATCATAATTCAGT 57.073 29.630 0.00 0.00 0.00 3.41
3188 3557 2.040606 AGTACCACCGCCCCATCT 59.959 61.111 0.00 0.00 0.00 2.90
3189 3558 2.064581 AGTACCACCGCCCCATCTC 61.065 63.158 0.00 0.00 0.00 2.75
3190 3559 2.039787 TACCACCGCCCCATCTCA 59.960 61.111 0.00 0.00 0.00 3.27
3191 3560 1.383943 TACCACCGCCCCATCTCAT 60.384 57.895 0.00 0.00 0.00 2.90
3192 3561 1.695114 TACCACCGCCCCATCTCATG 61.695 60.000 0.00 0.00 0.00 3.07
3194 3563 4.195334 ACCGCCCCATCTCATGCC 62.195 66.667 0.00 0.00 0.00 4.40
3195 3564 4.193893 CCGCCCCATCTCATGCCA 62.194 66.667 0.00 0.00 0.00 4.92
3474 3867 6.604396 AGGCTAGATCATGTCTCTCTATGATG 59.396 42.308 4.60 0.00 42.43 3.07
3544 3941 2.276732 GCCCTTTGCATAGGCTATGA 57.723 50.000 33.09 17.75 43.62 2.15
3546 3943 2.508526 CCCTTTGCATAGGCTATGACC 58.491 52.381 33.09 19.00 41.91 4.02
3548 3945 3.327757 CCCTTTGCATAGGCTATGACCTA 59.672 47.826 33.09 15.51 46.25 3.08
3598 4005 1.153349 GAGGGAACAGCCGGATGTC 60.153 63.158 28.00 18.64 37.63 3.06
3600 4007 1.153349 GGGAACAGCCGGATGTCTC 60.153 63.158 28.00 23.00 37.63 3.36
3634 4044 5.698741 TGATGACTGATTGGACTAATGGT 57.301 39.130 0.00 0.00 0.00 3.55
3669 4079 1.071699 GCACCTGGTTAAGAGGACACA 59.928 52.381 0.00 0.00 34.37 3.72
3671 4081 3.403038 CACCTGGTTAAGAGGACACAAG 58.597 50.000 0.00 0.00 34.37 3.16
3672 4082 3.071023 CACCTGGTTAAGAGGACACAAGA 59.929 47.826 0.00 0.00 34.37 3.02
3673 4083 3.071167 ACCTGGTTAAGAGGACACAAGAC 59.929 47.826 7.36 0.00 34.37 3.01
3675 4085 4.444306 CCTGGTTAAGAGGACACAAGACAA 60.444 45.833 0.00 0.00 31.48 3.18
3676 4086 5.304686 TGGTTAAGAGGACACAAGACAAT 57.695 39.130 0.00 0.00 0.00 2.71
3677 4087 5.063204 TGGTTAAGAGGACACAAGACAATG 58.937 41.667 0.00 0.00 0.00 2.82
3681 4091 4.558226 AGAGGACACAAGACAATGCATA 57.442 40.909 0.00 0.00 0.00 3.14
3682 4092 4.910195 AGAGGACACAAGACAATGCATAA 58.090 39.130 0.00 0.00 0.00 1.90
3683 4093 5.503927 AGAGGACACAAGACAATGCATAAT 58.496 37.500 0.00 0.00 0.00 1.28
3684 4094 5.356190 AGAGGACACAAGACAATGCATAATG 59.644 40.000 0.00 0.00 0.00 1.90
3685 4095 5.255687 AGGACACAAGACAATGCATAATGA 58.744 37.500 0.00 0.00 0.00 2.57
3686 4096 5.711506 AGGACACAAGACAATGCATAATGAA 59.288 36.000 0.00 0.00 0.00 2.57
3687 4097 6.379133 AGGACACAAGACAATGCATAATGAAT 59.621 34.615 0.00 0.00 0.00 2.57
3705 4115 7.587037 AATGAATTAATGATGGATGGAACGT 57.413 32.000 0.00 0.00 0.00 3.99
3874 4302 4.266070 GCGATGGCCAGCAGCATG 62.266 66.667 25.60 10.19 46.50 4.06
3939 4367 2.230660 GACAGCTACAGCCAAAAAGGT 58.769 47.619 0.00 0.00 43.38 3.50
3945 4373 3.818773 GCTACAGCCAAAAAGGTTACTGA 59.181 43.478 0.00 0.00 40.61 3.41
4003 4930 3.683847 GCTCCAATGCACTATCCTGTTCT 60.684 47.826 0.00 0.00 0.00 3.01
4014 4941 0.898320 TCCTGTTCTCTGTAGCTGCC 59.102 55.000 0.00 0.00 0.00 4.85
4015 4942 0.459237 CCTGTTCTCTGTAGCTGCCG 60.459 60.000 0.00 0.00 0.00 5.69
4016 4943 1.079819 TGTTCTCTGTAGCTGCCGC 60.080 57.895 0.00 0.00 0.00 6.53
4035 4962 1.866880 GCTGCTGCTTTCTTTGGTGTG 60.867 52.381 8.53 0.00 36.03 3.82
4093 5024 5.701224 CTGTCTATAGGAGAGGAAGGAACT 58.299 45.833 0.00 0.00 35.16 3.01
4132 5063 2.641305 TGCTCTAACTCCGTACCTCTC 58.359 52.381 0.00 0.00 0.00 3.20
4137 5068 5.676837 GCTCTAACTCCGTACCTCTCTTTTC 60.677 48.000 0.00 0.00 0.00 2.29
4252 5184 4.082354 GCTTCTTCATCCACTCATTGCTTT 60.082 41.667 0.00 0.00 0.00 3.51
4283 5215 4.390297 GTCTCTTGGAACTGTAACATCTGC 59.610 45.833 0.00 0.00 0.00 4.26
4311 5243 5.316167 TCATCTTGCATGGTTAAACTGACT 58.684 37.500 0.00 0.00 0.00 3.41
4313 5245 3.820467 TCTTGCATGGTTAAACTGACTGG 59.180 43.478 0.00 0.00 0.00 4.00
4401 5333 1.622811 CTGAGGAAGAAGGTGCTCACT 59.377 52.381 0.00 0.00 40.61 3.41
4402 5334 1.620819 TGAGGAAGAAGGTGCTCACTC 59.379 52.381 0.00 0.00 40.61 3.51
4403 5335 1.620819 GAGGAAGAAGGTGCTCACTCA 59.379 52.381 0.00 0.00 36.10 3.41
4404 5336 1.346068 AGGAAGAAGGTGCTCACTCAC 59.654 52.381 0.00 0.00 36.28 3.51
4405 5337 1.070758 GGAAGAAGGTGCTCACTCACA 59.929 52.381 0.00 0.00 38.66 3.58
4406 5338 2.485479 GGAAGAAGGTGCTCACTCACAA 60.485 50.000 0.00 0.00 38.66 3.33
4407 5339 2.540265 AGAAGGTGCTCACTCACAAG 57.460 50.000 0.00 0.00 38.66 3.16
4410 5342 2.758736 AGGTGCTCACTCACAAGATC 57.241 50.000 0.00 0.00 38.66 2.75
4411 5343 1.277557 AGGTGCTCACTCACAAGATCC 59.722 52.381 0.00 0.00 38.66 3.36
4413 5345 2.355513 GGTGCTCACTCACAAGATCCAT 60.356 50.000 0.00 0.00 38.66 3.41
4414 5346 3.118629 GGTGCTCACTCACAAGATCCATA 60.119 47.826 0.00 0.00 38.66 2.74
4415 5347 3.868077 GTGCTCACTCACAAGATCCATAC 59.132 47.826 0.00 0.00 36.97 2.39
4416 5348 3.515104 TGCTCACTCACAAGATCCATACA 59.485 43.478 0.00 0.00 0.00 2.29
4417 5349 4.162888 TGCTCACTCACAAGATCCATACAT 59.837 41.667 0.00 0.00 0.00 2.29
4418 5350 5.363580 TGCTCACTCACAAGATCCATACATA 59.636 40.000 0.00 0.00 0.00 2.29
4419 5351 6.127083 TGCTCACTCACAAGATCCATACATAA 60.127 38.462 0.00 0.00 0.00 1.90
4420 5352 6.763135 GCTCACTCACAAGATCCATACATAAA 59.237 38.462 0.00 0.00 0.00 1.40
4421 5353 7.254590 GCTCACTCACAAGATCCATACATAAAC 60.255 40.741 0.00 0.00 0.00 2.01
4422 5354 7.619965 TCACTCACAAGATCCATACATAAACA 58.380 34.615 0.00 0.00 0.00 2.83
4423 5355 8.267183 TCACTCACAAGATCCATACATAAACAT 58.733 33.333 0.00 0.00 0.00 2.71
4424 5356 9.546428 CACTCACAAGATCCATACATAAACATA 57.454 33.333 0.00 0.00 0.00 2.29
4425 5357 9.547753 ACTCACAAGATCCATACATAAACATAC 57.452 33.333 0.00 0.00 0.00 2.39
4426 5358 9.770097 CTCACAAGATCCATACATAAACATACT 57.230 33.333 0.00 0.00 0.00 2.12
4427 5359 9.764363 TCACAAGATCCATACATAAACATACTC 57.236 33.333 0.00 0.00 0.00 2.59
4428 5360 8.993121 CACAAGATCCATACATAAACATACTCC 58.007 37.037 0.00 0.00 0.00 3.85
4429 5361 8.938883 ACAAGATCCATACATAAACATACTCCT 58.061 33.333 0.00 0.00 0.00 3.69
4432 5364 9.036980 AGATCCATACATAAACATACTCCTACC 57.963 37.037 0.00 0.00 0.00 3.18
4433 5365 8.974292 ATCCATACATAAACATACTCCTACCT 57.026 34.615 0.00 0.00 0.00 3.08
4434 5366 8.418597 TCCATACATAAACATACTCCTACCTC 57.581 38.462 0.00 0.00 0.00 3.85
4435 5367 8.232412 TCCATACATAAACATACTCCTACCTCT 58.768 37.037 0.00 0.00 0.00 3.69
4436 5368 8.307483 CCATACATAAACATACTCCTACCTCTG 58.693 40.741 0.00 0.00 0.00 3.35
4437 5369 9.078990 CATACATAAACATACTCCTACCTCTGA 57.921 37.037 0.00 0.00 0.00 3.27
4445 5377 7.015680 ACATACTCCTACCTCTGATGATGATT 58.984 38.462 0.00 0.00 0.00 2.57
4449 5381 4.964897 TCCTACCTCTGATGATGATTGTGT 59.035 41.667 0.00 0.00 0.00 3.72
4453 5385 5.563592 ACCTCTGATGATGATTGTGTCAAA 58.436 37.500 0.00 0.00 40.97 2.69
4631 5568 2.754552 GTGCAGTCCATTTGATGCCTTA 59.245 45.455 0.00 0.00 37.89 2.69
5194 6146 1.011968 CGAACGGCGTCCATGAAGAA 61.012 55.000 15.17 0.00 34.64 2.52
5219 6183 2.107343 TGCACGTACGGCTGTTGT 59.893 55.556 21.06 0.00 0.00 3.32
5229 6193 1.370064 GGCTGTTGTGTCCCGTACT 59.630 57.895 0.00 0.00 0.00 2.73
5257 6221 0.106708 CTAGAAGCCGGCTTGCCATA 59.893 55.000 44.71 27.37 36.26 2.74
5592 6556 2.283298 ACTTGCTGCGGTTAGATCATG 58.717 47.619 0.00 0.00 0.00 3.07
5607 6571 8.589338 GGTTAGATCATGATCTACACCAGTAAT 58.411 37.037 36.26 21.19 46.69 1.89
5633 6597 8.655651 AATTAACCTCTCTTGAATCGAAGATC 57.344 34.615 0.00 0.00 45.12 2.75
5634 6598 4.300189 ACCTCTCTTGAATCGAAGATCG 57.700 45.455 0.00 0.00 45.12 3.69
5807 6772 5.569413 CGGATTAAACTTGTGGATAAGCAC 58.431 41.667 0.00 0.00 0.00 4.40
5963 6964 4.883006 TGTGTACGTGTACCTGCATATCTA 59.117 41.667 0.00 0.00 35.26 1.98
6011 7015 4.246458 GACAGACACATGTCCCTTTCTAC 58.754 47.826 8.41 0.00 45.85 2.59
6043 7049 1.519758 GGACGAATACATACGGTTGCG 59.480 52.381 0.00 0.00 0.00 4.85
6094 7102 1.895798 TCTACCCTCTCTTGTGCTGTG 59.104 52.381 0.00 0.00 0.00 3.66
6095 7103 1.620819 CTACCCTCTCTTGTGCTGTGT 59.379 52.381 0.00 0.00 0.00 3.72
6098 7106 1.475751 CCCTCTCTTGTGCTGTGTTGT 60.476 52.381 0.00 0.00 0.00 3.32
6099 7107 1.600957 CCTCTCTTGTGCTGTGTTGTG 59.399 52.381 0.00 0.00 0.00 3.33
6100 7108 1.003116 CTCTCTTGTGCTGTGTTGTGC 60.003 52.381 0.00 0.00 0.00 4.57
6126 7134 0.689623 CAGCCACATATCCCCTCTCC 59.310 60.000 0.00 0.00 0.00 3.71
6185 7198 0.918258 TGAGGCCCACAATCATAGCA 59.082 50.000 0.00 0.00 0.00 3.49
6277 7291 3.973973 CCCATGAATAGGGTCCTCTACAA 59.026 47.826 0.00 0.00 41.61 2.41
6307 7321 1.062488 AGGAAAGGACACAGCCACCT 61.062 55.000 0.00 0.00 35.36 4.00
6308 7322 0.690762 GGAAAGGACACAGCCACCTA 59.309 55.000 0.00 0.00 33.34 3.08
6309 7323 1.073284 GGAAAGGACACAGCCACCTAA 59.927 52.381 0.00 0.00 33.34 2.69
6322 7339 1.401905 CCACCTAATTTTCAGCTCCGC 59.598 52.381 0.00 0.00 0.00 5.54
6362 7379 0.321298 GGTGGATACCGTGTTGCTGT 60.321 55.000 0.00 0.00 37.19 4.40
6441 7460 3.393941 CTCTCAAGGCCTCAAGGGATAAT 59.606 47.826 5.23 0.00 37.23 1.28
6462 7481 9.434420 GATAATAGAAGATTGAGACCTCCATTG 57.566 37.037 0.00 0.00 0.00 2.82
6465 7484 2.996631 AGATTGAGACCTCCATTGTGC 58.003 47.619 0.00 0.00 0.00 4.57
6497 7516 2.188817 TCCTACCTTTTCTGAGCCCTC 58.811 52.381 0.00 0.00 0.00 4.30
6508 7527 2.097825 CTGAGCCCTCATTCCTTTTGG 58.902 52.381 0.00 0.00 39.13 3.28
6533 7552 1.066303 TGTTGATTGCGGTTTGTGGAC 59.934 47.619 0.00 0.00 0.00 4.02
6621 7644 5.163478 GGGCAATCATTCTGCATAAAGTCTT 60.163 40.000 0.00 0.00 41.78 3.01
6625 7648 7.854916 GCAATCATTCTGCATAAAGTCTTCTAC 59.145 37.037 0.00 0.00 39.69 2.59
6651 7675 7.859377 CGAAAAGATGGTGAATGGATTTAGATG 59.141 37.037 0.00 0.00 0.00 2.90
6661 7685 7.859377 GTGAATGGATTTAGATGTAGTTGCATG 59.141 37.037 0.00 0.00 0.00 4.06
6676 7700 9.185680 TGTAGTTGCATGAGAGAAAGTAGTATA 57.814 33.333 0.00 0.00 0.00 1.47
6729 7753 5.892524 AACAACTTGTTAGGGGTACTACA 57.107 39.130 5.30 0.00 39.09 2.74
6730 7754 5.479124 ACAACTTGTTAGGGGTACTACAG 57.521 43.478 0.00 0.00 0.00 2.74
6731 7755 4.285260 ACAACTTGTTAGGGGTACTACAGG 59.715 45.833 0.00 0.00 0.00 4.00
6736 7760 5.216665 TGTTAGGGGTACTACAGGAAGAT 57.783 43.478 0.00 0.00 0.00 2.40
6738 7762 6.744822 TGTTAGGGGTACTACAGGAAGATAA 58.255 40.000 0.00 0.00 0.00 1.75
6741 7765 6.809976 AGGGGTACTACAGGAAGATAAAAG 57.190 41.667 0.00 0.00 0.00 2.27
6742 7766 6.509386 AGGGGTACTACAGGAAGATAAAAGA 58.491 40.000 0.00 0.00 0.00 2.52
6744 7768 7.628101 AGGGGTACTACAGGAAGATAAAAGAAT 59.372 37.037 0.00 0.00 0.00 2.40
6745 7769 7.715686 GGGGTACTACAGGAAGATAAAAGAATG 59.284 40.741 0.00 0.00 0.00 2.67
6746 7770 8.483758 GGGTACTACAGGAAGATAAAAGAATGA 58.516 37.037 0.00 0.00 0.00 2.57
6747 7771 9.535878 GGTACTACAGGAAGATAAAAGAATGAG 57.464 37.037 0.00 0.00 0.00 2.90
6750 7774 8.816894 ACTACAGGAAGATAAAAGAATGAGTCA 58.183 33.333 0.00 0.00 0.00 3.41
7364 8388 6.816136 TCTCCTTTTCCTTTGGTTTTCATTC 58.184 36.000 0.00 0.00 0.00 2.67
7367 8391 5.991606 CCTTTTCCTTTGGTTTTCATTCTCC 59.008 40.000 0.00 0.00 0.00 3.71
7372 8396 5.301805 TCCTTTGGTTTTCATTCTCCTCAAC 59.698 40.000 0.00 0.00 0.00 3.18
7377 8401 7.181569 TGGTTTTCATTCTCCTCAACTTTTT 57.818 32.000 0.00 0.00 0.00 1.94
7378 8402 7.264947 TGGTTTTCATTCTCCTCAACTTTTTC 58.735 34.615 0.00 0.00 0.00 2.29
7379 8403 7.124147 TGGTTTTCATTCTCCTCAACTTTTTCT 59.876 33.333 0.00 0.00 0.00 2.52
7380 8404 7.436376 GGTTTTCATTCTCCTCAACTTTTTCTG 59.564 37.037 0.00 0.00 0.00 3.02
7381 8405 7.645058 TTTCATTCTCCTCAACTTTTTCTGT 57.355 32.000 0.00 0.00 0.00 3.41
7383 8407 8.746052 TTCATTCTCCTCAACTTTTTCTGTTA 57.254 30.769 0.00 0.00 0.00 2.41
7384 8408 8.924511 TCATTCTCCTCAACTTTTTCTGTTAT 57.075 30.769 0.00 0.00 0.00 1.89
7385 8409 8.786898 TCATTCTCCTCAACTTTTTCTGTTATG 58.213 33.333 0.00 0.00 0.00 1.90
7386 8410 6.560253 TCTCCTCAACTTTTTCTGTTATGC 57.440 37.500 0.00 0.00 0.00 3.14
7387 8411 5.473504 TCTCCTCAACTTTTTCTGTTATGCC 59.526 40.000 0.00 0.00 0.00 4.40
7418 8453 3.813166 GTCCCACACGATCAGAAAAGAAA 59.187 43.478 0.00 0.00 0.00 2.52
7429 8464 7.872993 ACGATCAGAAAAGAAAGTCACATTAGA 59.127 33.333 0.00 0.00 0.00 2.10
7442 8477 6.631016 AGTCACATTAGAATAAACTCTCGCA 58.369 36.000 0.00 0.00 0.00 5.10
7443 8478 7.097192 AGTCACATTAGAATAAACTCTCGCAA 58.903 34.615 0.00 0.00 0.00 4.85
7444 8479 7.276658 AGTCACATTAGAATAAACTCTCGCAAG 59.723 37.037 0.00 0.00 0.00 4.01
7463 8498 3.320673 AGAAGATCTGAACCAACGTCC 57.679 47.619 0.00 0.00 0.00 4.79
7500 8535 5.534654 AGCAGTGAAAACAACCTAGCATTAA 59.465 36.000 0.00 0.00 0.00 1.40
7854 8891 6.206829 GCACACTGTATTCTTAGTTTTTCCCT 59.793 38.462 0.00 0.00 0.00 4.20
7908 8945 4.260784 CCATTTGGCGAGTCACTTATTAGC 60.261 45.833 0.00 0.00 0.00 3.09
7917 8954 6.183360 GCGAGTCACTTATTAGCTGTTCATTT 60.183 38.462 0.00 0.00 0.00 2.32
7940 8977 1.705337 GGGATTCGACACATGTGCCG 61.705 60.000 26.18 26.18 37.80 5.69
7941 8978 1.060937 GATTCGACACATGTGCCGC 59.939 57.895 27.09 15.23 36.40 6.53
7945 8982 1.440850 CGACACATGTGCCGCAAAG 60.441 57.895 25.68 5.67 28.40 2.77
7946 8983 1.840630 CGACACATGTGCCGCAAAGA 61.841 55.000 25.68 0.00 28.40 2.52
7947 8984 0.110056 GACACATGTGCCGCAAAGAG 60.110 55.000 25.68 0.00 0.00 2.85
7948 8985 0.534877 ACACATGTGCCGCAAAGAGA 60.535 50.000 25.68 0.00 0.00 3.10
7949 8986 0.806868 CACATGTGCCGCAAAGAGAT 59.193 50.000 13.94 0.00 0.00 2.75
7952 8989 3.065786 CACATGTGCCGCAAAGAGATATT 59.934 43.478 13.94 0.00 0.00 1.28
8027 9071 1.238439 CCGACAATGACTTGCACCTT 58.762 50.000 0.00 0.00 35.69 3.50
8035 9079 7.481275 ACAATGACTTGCACCTTTTATTTTG 57.519 32.000 0.00 0.00 35.69 2.44
8089 9133 0.766131 TTAGCCCAACAGGAACCGAA 59.234 50.000 0.00 0.00 38.24 4.30
8149 9193 2.027192 TCAGTTCTCCGGATTTTGAGGG 60.027 50.000 3.57 0.00 0.00 4.30
8150 9194 1.095600 GTTCTCCGGATTTTGAGGGC 58.904 55.000 3.57 0.00 0.00 5.19
8275 9319 2.846827 ACATCACTAGGGAAAAGGGAGG 59.153 50.000 0.00 0.00 34.41 4.30
8278 9322 0.501468 ACTAGGGAAAAGGGAGGGGT 59.499 55.000 0.00 0.00 0.00 4.95
8399 9443 0.107268 AGGGCAAAGCAAAGCAAAGG 59.893 50.000 0.00 0.00 0.00 3.11
8400 9444 1.509644 GGGCAAAGCAAAGCAAAGGC 61.510 55.000 0.00 0.00 41.61 4.35
8572 9617 9.220767 GACCTTTAGAGATAACATCACAAAACT 57.779 33.333 0.00 0.00 0.00 2.66
8577 9622 7.897575 AGAGATAACATCACAAAACTGAGAC 57.102 36.000 0.00 0.00 0.00 3.36
8578 9623 7.445121 AGAGATAACATCACAAAACTGAGACA 58.555 34.615 0.00 0.00 0.00 3.41
8596 9641 9.453572 ACTGAGACAAGCAATAATTTAAGATCA 57.546 29.630 0.00 0.00 0.00 2.92
8623 9668 5.735427 TGTCAAATCAAAAGAAAACGACGAC 59.265 36.000 0.00 0.00 0.00 4.34
8624 9669 4.959159 TCAAATCAAAAGAAAACGACGACG 59.041 37.500 5.58 5.58 45.75 5.12
8656 9701 6.463995 TCAACAAACAATTAAGGACAGCTT 57.536 33.333 0.00 0.00 0.00 3.74
8675 9720 3.311871 GCTTCTGCAGGTTACAGATGATG 59.688 47.826 15.13 0.00 43.40 3.07
8697 9742 3.059597 GCCGATATCACAGATGGAAAACG 60.060 47.826 3.12 0.00 0.00 3.60
8767 9812 2.124122 GTGCCACCGAAAATCAACAAC 58.876 47.619 0.00 0.00 0.00 3.32
8772 9817 3.184178 CCACCGAAAATCAACAACAATGC 59.816 43.478 0.00 0.00 0.00 3.56
8784 9829 1.955778 CAACAATGCCAGGACAAGTCA 59.044 47.619 2.29 0.00 0.00 3.41
8785 9830 1.901591 ACAATGCCAGGACAAGTCAG 58.098 50.000 2.29 0.00 0.00 3.51
8786 9831 1.143684 ACAATGCCAGGACAAGTCAGT 59.856 47.619 2.29 0.00 0.00 3.41
8788 9833 0.037303 ATGCCAGGACAAGTCAGTGG 59.963 55.000 13.65 13.65 37.93 4.00
8789 9834 1.344953 TGCCAGGACAAGTCAGTGGT 61.345 55.000 17.26 0.00 37.48 4.16
8791 9836 1.608283 GCCAGGACAAGTCAGTGGTAC 60.608 57.143 17.26 0.00 37.48 3.34
8792 9837 1.971357 CCAGGACAAGTCAGTGGTACT 59.029 52.381 10.97 0.00 33.14 2.73
8803 9848 6.420913 AGTCAGTGGTACTGTAGAAACAAT 57.579 37.500 8.64 0.00 46.03 2.71
8806 9851 6.366332 GTCAGTGGTACTGTAGAAACAATCAG 59.634 42.308 8.64 0.00 46.03 2.90
8808 9853 4.994852 GTGGTACTGTAGAAACAATCAGCA 59.005 41.667 0.00 0.00 34.49 4.41
8810 9855 6.017440 GTGGTACTGTAGAAACAATCAGCAAA 60.017 38.462 0.00 0.00 34.49 3.68
8813 9858 7.538678 GGTACTGTAGAAACAATCAGCAAATTG 59.461 37.037 8.94 8.94 41.46 2.32
8845 9890 6.959639 AAGAAACCATGAAAGAAGCAGTAA 57.040 33.333 0.00 0.00 0.00 2.24
8849 9894 5.886960 ACCATGAAAGAAGCAGTAACATC 57.113 39.130 0.00 0.00 0.00 3.06
8869 9914 5.292101 ACATCTAAGAGCGATGTTAAGCAAC 59.708 40.000 0.17 0.00 46.80 4.17
8885 9930 1.662360 CAACACATGTCGAAACAGCG 58.338 50.000 0.00 0.00 39.20 5.18
8886 9931 0.041312 AACACATGTCGAAACAGCGC 60.041 50.000 0.00 0.00 39.20 5.92
8896 9941 0.668535 GAAACAGCGCAAGGAACCTT 59.331 50.000 11.47 0.00 36.60 3.50
8919 9964 9.421806 CCTTGCATGAATAAAACAATAAACAGA 57.578 29.630 0.00 0.00 0.00 3.41
9008 10077 1.813178 CATCAGCTCCATCATGGCATC 59.187 52.381 0.00 0.00 37.47 3.91
9009 10078 0.841289 TCAGCTCCATCATGGCATCA 59.159 50.000 0.00 0.00 37.47 3.07
9024 10093 1.238439 CATCAAGCCGGAACTGTTGT 58.762 50.000 5.05 0.00 0.00 3.32
9051 10120 3.189080 CGTGAAACTTGCCATCAGATGAA 59.811 43.478 12.41 0.00 31.75 2.57
9052 10121 4.670992 CGTGAAACTTGCCATCAGATGAAG 60.671 45.833 12.41 10.62 31.75 3.02
9055 10124 5.356190 TGAAACTTGCCATCAGATGAAGATC 59.644 40.000 12.41 11.71 0.00 2.75
9056 10125 4.498894 ACTTGCCATCAGATGAAGATCA 57.501 40.909 12.41 0.00 0.00 2.92
9057 10126 5.050126 ACTTGCCATCAGATGAAGATCAT 57.950 39.130 12.41 0.00 40.34 2.45
9058 10127 5.446860 ACTTGCCATCAGATGAAGATCATT 58.553 37.500 12.41 0.00 37.20 2.57
9059 10128 5.531659 ACTTGCCATCAGATGAAGATCATTC 59.468 40.000 12.41 0.00 37.20 2.67
9060 10129 4.395625 TGCCATCAGATGAAGATCATTCC 58.604 43.478 12.41 0.00 37.20 3.01
9061 10130 4.141344 TGCCATCAGATGAAGATCATTCCA 60.141 41.667 12.41 0.00 37.20 3.53
9062 10131 4.825634 GCCATCAGATGAAGATCATTCCAA 59.174 41.667 12.41 0.00 37.20 3.53
9063 10132 5.278364 GCCATCAGATGAAGATCATTCCAAC 60.278 44.000 12.41 0.00 37.20 3.77
9115 10184 1.739067 AGCCGCTCATTAACAAGGAC 58.261 50.000 0.00 0.00 0.00 3.85
9127 10196 3.864789 AACAAGGACAGACAGATGGTT 57.135 42.857 0.00 0.00 0.00 3.67
9145 10214 7.599998 CAGATGGTTAAAAGGATGAAAAACCAG 59.400 37.037 10.18 0.00 46.76 4.00
9146 10215 6.168270 TGGTTAAAAGGATGAAAAACCAGG 57.832 37.500 0.76 0.00 40.94 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 26 3.073678 GCATGGAAAATGGGTTGGTTTC 58.926 45.455 0.00 0.00 0.00 2.78
30 33 2.358372 GGGCGCATGGAAAATGGGT 61.358 57.895 10.83 0.00 34.87 4.51
57 60 3.971150 TGCGTCGAAAAACATGGAATTT 58.029 36.364 0.00 0.00 0.00 1.82
101 106 3.127533 GTGCACCACCGATCCAGC 61.128 66.667 5.22 0.00 0.00 4.85
150 155 1.079127 CGTGGCCACTCCTAACCAG 60.079 63.158 32.28 10.68 35.26 4.00
168 173 5.407387 TCACCAACAATTCTAGTTTACTCGC 59.593 40.000 0.00 0.00 0.00 5.03
202 340 3.801114 TGTCAACCATATGTCCTCTCG 57.199 47.619 1.24 0.00 0.00 4.04
208 346 4.202050 GGGCTGATTTGTCAACCATATGTC 60.202 45.833 1.24 0.00 0.00 3.06
235 373 2.224281 GGGAGAGACACATTGACACACA 60.224 50.000 0.00 0.00 0.00 3.72
236 374 2.224281 TGGGAGAGACACATTGACACAC 60.224 50.000 0.00 0.00 0.00 3.82
237 375 2.037641 CTGGGAGAGACACATTGACACA 59.962 50.000 0.00 0.00 0.00 3.72
238 376 2.037772 ACTGGGAGAGACACATTGACAC 59.962 50.000 0.00 0.00 0.00 3.67
239 377 2.300152 GACTGGGAGAGACACATTGACA 59.700 50.000 0.00 0.00 0.00 3.58
240 378 2.564947 AGACTGGGAGAGACACATTGAC 59.435 50.000 0.00 0.00 0.00 3.18
241 379 2.828520 GAGACTGGGAGAGACACATTGA 59.171 50.000 0.00 0.00 0.00 2.57
242 380 2.830923 AGAGACTGGGAGAGACACATTG 59.169 50.000 0.00 0.00 0.00 2.82
243 381 3.096092 GAGAGACTGGGAGAGACACATT 58.904 50.000 0.00 0.00 0.00 2.71
244 382 2.311542 AGAGAGACTGGGAGAGACACAT 59.688 50.000 0.00 0.00 0.00 3.21
245 383 1.707989 AGAGAGACTGGGAGAGACACA 59.292 52.381 0.00 0.00 0.00 3.72
246 384 2.026262 AGAGAGAGACTGGGAGAGACAC 60.026 54.545 0.00 0.00 0.00 3.67
247 385 2.238646 GAGAGAGAGACTGGGAGAGACA 59.761 54.545 0.00 0.00 0.00 3.41
248 386 2.505819 AGAGAGAGAGACTGGGAGAGAC 59.494 54.545 0.00 0.00 0.00 3.36
249 387 2.771943 GAGAGAGAGAGACTGGGAGAGA 59.228 54.545 0.00 0.00 0.00 3.10
250 388 2.774234 AGAGAGAGAGAGACTGGGAGAG 59.226 54.545 0.00 0.00 0.00 3.20
251 389 2.771943 GAGAGAGAGAGAGACTGGGAGA 59.228 54.545 0.00 0.00 0.00 3.71
252 390 2.774234 AGAGAGAGAGAGAGACTGGGAG 59.226 54.545 0.00 0.00 0.00 4.30
253 391 2.771943 GAGAGAGAGAGAGAGACTGGGA 59.228 54.545 0.00 0.00 0.00 4.37
254 392 2.774234 AGAGAGAGAGAGAGAGACTGGG 59.226 54.545 0.00 0.00 0.00 4.45
255 393 3.708631 AGAGAGAGAGAGAGAGAGACTGG 59.291 52.174 0.00 0.00 0.00 4.00
256 394 4.648762 AGAGAGAGAGAGAGAGAGAGACTG 59.351 50.000 0.00 0.00 0.00 3.51
257 395 4.648762 CAGAGAGAGAGAGAGAGAGAGACT 59.351 50.000 0.00 0.00 0.00 3.24
258 396 4.739137 GCAGAGAGAGAGAGAGAGAGAGAC 60.739 54.167 0.00 0.00 0.00 3.36
259 397 3.386078 GCAGAGAGAGAGAGAGAGAGAGA 59.614 52.174 0.00 0.00 0.00 3.10
260 398 3.387374 AGCAGAGAGAGAGAGAGAGAGAG 59.613 52.174 0.00 0.00 0.00 3.20
261 399 3.378512 AGCAGAGAGAGAGAGAGAGAGA 58.621 50.000 0.00 0.00 0.00 3.10
262 400 3.834489 AGCAGAGAGAGAGAGAGAGAG 57.166 52.381 0.00 0.00 0.00 3.20
263 401 4.019411 TGAAAGCAGAGAGAGAGAGAGAGA 60.019 45.833 0.00 0.00 0.00 3.10
264 402 4.264253 TGAAAGCAGAGAGAGAGAGAGAG 58.736 47.826 0.00 0.00 0.00 3.20
265 403 4.264253 CTGAAAGCAGAGAGAGAGAGAGA 58.736 47.826 0.00 0.00 45.17 3.10
266 404 3.379372 CCTGAAAGCAGAGAGAGAGAGAG 59.621 52.174 0.00 0.00 45.17 3.20
289 427 8.013667 AGTTGTTCTACCCCATCTATCTATTCT 58.986 37.037 0.00 0.00 0.00 2.40
290 428 8.196378 AGTTGTTCTACCCCATCTATCTATTC 57.804 38.462 0.00 0.00 0.00 1.75
291 429 8.568617 AAGTTGTTCTACCCCATCTATCTATT 57.431 34.615 0.00 0.00 0.00 1.73
292 430 8.013667 AGAAGTTGTTCTACCCCATCTATCTAT 58.986 37.037 0.00 0.00 41.54 1.98
293 431 7.363031 AGAAGTTGTTCTACCCCATCTATCTA 58.637 38.462 0.00 0.00 41.54 1.98
297 435 5.338632 TGAGAAGTTGTTCTACCCCATCTA 58.661 41.667 0.00 0.00 43.50 1.98
299 437 4.553330 TGAGAAGTTGTTCTACCCCATC 57.447 45.455 0.00 0.00 43.50 3.51
300 438 4.807643 GCTTGAGAAGTTGTTCTACCCCAT 60.808 45.833 0.00 0.00 43.50 4.00
301 439 3.496160 GCTTGAGAAGTTGTTCTACCCCA 60.496 47.826 0.00 0.00 43.50 4.96
456 620 0.250295 CTCCTCGCAACCACCTTTCA 60.250 55.000 0.00 0.00 0.00 2.69
476 640 0.967887 TTCTGTCTCCTCCTGCTCCG 60.968 60.000 0.00 0.00 0.00 4.63
525 689 9.256228 GGTATAGATAGAGAGAGAGAAGAGAGA 57.744 40.741 0.00 0.00 0.00 3.10
526 690 9.261035 AGGTATAGATAGAGAGAGAGAAGAGAG 57.739 40.741 0.00 0.00 0.00 3.20
527 691 9.256228 GAGGTATAGATAGAGAGAGAGAAGAGA 57.744 40.741 0.00 0.00 0.00 3.10
528 692 8.478877 GGAGGTATAGATAGAGAGAGAGAAGAG 58.521 44.444 0.00 0.00 0.00 2.85
529 693 7.959152 TGGAGGTATAGATAGAGAGAGAGAAGA 59.041 40.741 0.00 0.00 0.00 2.87
530 694 8.146053 TGGAGGTATAGATAGAGAGAGAGAAG 57.854 42.308 0.00 0.00 0.00 2.85
531 695 8.694171 ATGGAGGTATAGATAGAGAGAGAGAA 57.306 38.462 0.00 0.00 0.00 2.87
532 696 8.129001 AGATGGAGGTATAGATAGAGAGAGAGA 58.871 40.741 0.00 0.00 0.00 3.10
533 697 8.324191 AGATGGAGGTATAGATAGAGAGAGAG 57.676 42.308 0.00 0.00 0.00 3.20
534 698 8.129001 AGAGATGGAGGTATAGATAGAGAGAGA 58.871 40.741 0.00 0.00 0.00 3.10
536 700 8.129001 AGAGAGATGGAGGTATAGATAGAGAGA 58.871 40.741 0.00 0.00 0.00 3.10
538 702 9.791781 TTAGAGAGATGGAGGTATAGATAGAGA 57.208 37.037 0.00 0.00 0.00 3.10
539 703 9.832445 GTTAGAGAGATGGAGGTATAGATAGAG 57.168 40.741 0.00 0.00 0.00 2.43
540 704 8.774183 GGTTAGAGAGATGGAGGTATAGATAGA 58.226 40.741 0.00 0.00 0.00 1.98
541 705 7.996644 GGGTTAGAGAGATGGAGGTATAGATAG 59.003 44.444 0.00 0.00 0.00 2.08
542 706 7.689409 AGGGTTAGAGAGATGGAGGTATAGATA 59.311 40.741 0.00 0.00 0.00 1.98
543 707 6.511083 AGGGTTAGAGAGATGGAGGTATAGAT 59.489 42.308 0.00 0.00 0.00 1.98
544 708 5.858408 AGGGTTAGAGAGATGGAGGTATAGA 59.142 44.000 0.00 0.00 0.00 1.98
545 709 6.011981 AGAGGGTTAGAGAGATGGAGGTATAG 60.012 46.154 0.00 0.00 0.00 1.31
546 710 5.858408 AGAGGGTTAGAGAGATGGAGGTATA 59.142 44.000 0.00 0.00 0.00 1.47
547 711 4.672650 AGAGGGTTAGAGAGATGGAGGTAT 59.327 45.833 0.00 0.00 0.00 2.73
548 712 4.055820 AGAGGGTTAGAGAGATGGAGGTA 58.944 47.826 0.00 0.00 0.00 3.08
549 713 2.862597 AGAGGGTTAGAGAGATGGAGGT 59.137 50.000 0.00 0.00 0.00 3.85
554 718 3.292460 ACCGAAGAGGGTTAGAGAGATG 58.708 50.000 0.00 0.00 46.96 2.90
555 719 3.053544 TGACCGAAGAGGGTTAGAGAGAT 60.054 47.826 0.00 0.00 46.96 2.75
575 739 0.964700 CTGTGTGAGAGCTGGACTGA 59.035 55.000 0.00 0.00 0.00 3.41
586 750 3.935203 GAGAGAGAGAGAGTCTGTGTGAG 59.065 52.174 0.00 0.00 34.71 3.51
587 751 3.582647 AGAGAGAGAGAGAGTCTGTGTGA 59.417 47.826 0.00 0.00 34.71 3.58
589 753 3.840666 AGAGAGAGAGAGAGAGTCTGTGT 59.159 47.826 0.00 0.00 34.71 3.72
590 754 4.161189 AGAGAGAGAGAGAGAGAGTCTGTG 59.839 50.000 0.00 0.00 34.71 3.66
591 755 4.161189 CAGAGAGAGAGAGAGAGAGTCTGT 59.839 50.000 0.00 0.00 34.71 3.41
593 757 4.357325 ACAGAGAGAGAGAGAGAGAGTCT 58.643 47.826 0.00 0.00 38.71 3.24
594 758 4.404073 AGACAGAGAGAGAGAGAGAGAGTC 59.596 50.000 0.00 0.00 0.00 3.36
596 760 4.648762 AGAGACAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
597 761 4.614475 AGAGACAGAGAGAGAGAGAGAGA 58.386 47.826 0.00 0.00 0.00 3.10
598 762 5.508825 GCTAGAGACAGAGAGAGAGAGAGAG 60.509 52.000 0.00 0.00 0.00 3.20
599 763 4.342378 GCTAGAGACAGAGAGAGAGAGAGA 59.658 50.000 0.00 0.00 0.00 3.10
819 1025 0.395586 GAGGCAGAGGCAGAGAGAGA 60.396 60.000 0.00 0.00 43.71 3.10
823 1029 2.357575 GCAGAGGCAGAGGCAGAGA 61.358 63.158 0.00 0.00 43.71 3.10
828 1034 4.173924 GGAGGCAGAGGCAGAGGC 62.174 72.222 0.00 0.00 43.71 4.70
829 1035 3.478274 GGGAGGCAGAGGCAGAGG 61.478 72.222 0.00 0.00 43.71 3.69
830 1036 3.478274 GGGGAGGCAGAGGCAGAG 61.478 72.222 0.00 0.00 43.71 3.35
831 1037 3.991924 GAGGGGAGGCAGAGGCAGA 62.992 68.421 0.00 0.00 43.71 4.26
893 1099 0.923358 GGACCAGAGAGAGAGAGGGA 59.077 60.000 0.00 0.00 0.00 4.20
895 1101 1.133792 GGAGGACCAGAGAGAGAGAGG 60.134 61.905 0.00 0.00 35.97 3.69
904 1110 0.926293 AGAGAGAGGGAGGACCAGAG 59.074 60.000 0.00 0.00 43.89 3.35
905 1111 0.923358 GAGAGAGAGGGAGGACCAGA 59.077 60.000 0.00 0.00 43.89 3.86
906 1112 0.106217 GGAGAGAGAGGGAGGACCAG 60.106 65.000 0.00 0.00 43.89 4.00
907 1113 0.851332 TGGAGAGAGAGGGAGGACCA 60.851 60.000 0.00 0.00 43.89 4.02
908 1114 0.396556 GTGGAGAGAGAGGGAGGACC 60.397 65.000 0.00 0.00 40.67 4.46
909 1115 0.396556 GGTGGAGAGAGAGGGAGGAC 60.397 65.000 0.00 0.00 0.00 3.85
1026 1255 2.989639 CTGGCCATCCTCCACGAA 59.010 61.111 5.51 0.00 0.00 3.85
1161 1393 0.324943 GGGAGTACAAGAAGCTGGCA 59.675 55.000 0.00 0.00 0.00 4.92
1162 1394 0.393132 GGGGAGTACAAGAAGCTGGC 60.393 60.000 0.00 0.00 0.00 4.85
1163 1395 0.253327 GGGGGAGTACAAGAAGCTGG 59.747 60.000 0.00 0.00 0.00 4.85
1171 1403 1.229723 GGGTGGAGGGGGAGTACAA 60.230 63.158 0.00 0.00 0.00 2.41
1181 1413 0.972471 GCAAGGGAAATGGGTGGAGG 60.972 60.000 0.00 0.00 0.00 4.30
1183 1415 0.189574 TTGCAAGGGAAATGGGTGGA 59.810 50.000 0.00 0.00 0.00 4.02
1185 1417 2.926778 TTTTGCAAGGGAAATGGGTG 57.073 45.000 0.00 0.00 0.00 4.61
1186 1418 4.451891 AAATTTTGCAAGGGAAATGGGT 57.548 36.364 0.00 0.00 0.00 4.51
1190 1422 8.065473 AGAAACAAAAATTTTGCAAGGGAAAT 57.935 26.923 17.39 0.00 0.00 2.17
1191 1423 7.459795 AGAAACAAAAATTTTGCAAGGGAAA 57.540 28.000 17.39 0.00 0.00 3.13
1193 1425 7.459795 AAAGAAACAAAAATTTTGCAAGGGA 57.540 28.000 17.39 0.00 0.00 4.20
1194 1426 8.531622 AAAAAGAAACAAAAATTTTGCAAGGG 57.468 26.923 17.39 0.00 0.00 3.95
1274 1526 2.767960 TGGTGATCTGATCTTGCTAGCA 59.232 45.455 14.93 14.93 0.00 3.49
1286 1538 4.823989 AGAAAAAGTTGGTCTGGTGATCTG 59.176 41.667 0.00 0.00 0.00 2.90
1287 1539 5.053978 AGAAAAAGTTGGTCTGGTGATCT 57.946 39.130 0.00 0.00 0.00 2.75
1288 1540 5.523369 CAAGAAAAAGTTGGTCTGGTGATC 58.477 41.667 0.00 0.00 0.00 2.92
1289 1541 4.202151 GCAAGAAAAAGTTGGTCTGGTGAT 60.202 41.667 0.00 0.00 0.00 3.06
1290 1542 3.130340 GCAAGAAAAAGTTGGTCTGGTGA 59.870 43.478 0.00 0.00 0.00 4.02
1291 1543 3.119173 TGCAAGAAAAAGTTGGTCTGGTG 60.119 43.478 0.00 0.00 0.00 4.17
1292 1544 3.096092 TGCAAGAAAAAGTTGGTCTGGT 58.904 40.909 0.00 0.00 0.00 4.00
1293 1545 3.709987 CTGCAAGAAAAAGTTGGTCTGG 58.290 45.455 0.00 0.00 34.07 3.86
1314 1566 2.164422 GAGGGATTTGCAAACTACTGGC 59.836 50.000 15.41 0.00 0.00 4.85
1342 1597 8.293699 AGGAATTAATTAAACAAGTAGCCCTG 57.706 34.615 1.21 0.00 0.00 4.45
1427 1689 2.412870 TCTGTGTGTGCGTGGAATAAG 58.587 47.619 0.00 0.00 0.00 1.73
1428 1690 2.535012 TCTGTGTGTGCGTGGAATAA 57.465 45.000 0.00 0.00 0.00 1.40
1429 1691 2.760634 ATCTGTGTGTGCGTGGAATA 57.239 45.000 0.00 0.00 0.00 1.75
1430 1692 2.760634 TATCTGTGTGTGCGTGGAAT 57.239 45.000 0.00 0.00 0.00 3.01
1527 1795 3.044235 TCACTCTCGTAGTACGGTTCA 57.956 47.619 21.85 2.31 42.81 3.18
1538 1806 2.362503 TGCCCGGATCACTCTCGT 60.363 61.111 0.73 0.00 0.00 4.18
1596 1864 4.232091 TGGACAGATAAGTAGGGATTCCC 58.768 47.826 14.42 14.42 45.90 3.97
1597 1865 4.262678 GCTGGACAGATAAGTAGGGATTCC 60.263 50.000 3.00 0.00 0.00 3.01
1598 1866 4.559704 CGCTGGACAGATAAGTAGGGATTC 60.560 50.000 3.00 0.00 0.00 2.52
1599 1867 3.322254 CGCTGGACAGATAAGTAGGGATT 59.678 47.826 3.00 0.00 0.00 3.01
1600 1868 2.894126 CGCTGGACAGATAAGTAGGGAT 59.106 50.000 3.00 0.00 0.00 3.85
1601 1869 2.307768 CGCTGGACAGATAAGTAGGGA 58.692 52.381 3.00 0.00 0.00 4.20
1602 1870 1.269831 GCGCTGGACAGATAAGTAGGG 60.270 57.143 0.00 0.00 0.00 3.53
1603 1871 1.600663 CGCGCTGGACAGATAAGTAGG 60.601 57.143 5.56 0.00 0.00 3.18
1604 1872 1.600663 CCGCGCTGGACAGATAAGTAG 60.601 57.143 12.11 0.00 42.00 2.57
1605 1873 0.384309 CCGCGCTGGACAGATAAGTA 59.616 55.000 12.11 0.00 42.00 2.24
1606 1874 1.141881 CCGCGCTGGACAGATAAGT 59.858 57.895 12.11 0.00 42.00 2.24
1696 1967 2.609491 CGCCAACTTACTGTGCTGTAGA 60.609 50.000 0.00 0.00 0.00 2.59
1726 1997 3.311871 GTCATCTCATCAATCACCAGTGC 59.688 47.826 0.00 0.00 0.00 4.40
1943 2223 4.155644 GGTGCATGGAAGAAGAAGAAGAAG 59.844 45.833 0.00 0.00 0.00 2.85
1944 2224 4.074970 GGTGCATGGAAGAAGAAGAAGAA 58.925 43.478 0.00 0.00 0.00 2.52
1945 2225 3.328931 AGGTGCATGGAAGAAGAAGAAGA 59.671 43.478 0.00 0.00 0.00 2.87
2144 2460 3.400054 GGAGGGGAGGTCAACCGG 61.400 72.222 0.00 0.00 42.08 5.28
2165 2481 2.742372 GCACTGTTGGCGACGGAT 60.742 61.111 20.57 2.04 38.07 4.18
2230 2559 5.505780 CCTTACCAGAGAGAGAGAGAGAAA 58.494 45.833 0.00 0.00 0.00 2.52
2233 2562 3.435026 CCCCTTACCAGAGAGAGAGAGAG 60.435 56.522 0.00 0.00 0.00 3.20
2255 2584 2.422945 GGACCTCTCTCTCTCTCTTCCC 60.423 59.091 0.00 0.00 0.00 3.97
2261 2590 1.226262 GCCGGACCTCTCTCTCTCT 59.774 63.158 5.05 0.00 0.00 3.10
2282 2611 3.112709 GCTGTTCGTGCGTCCTCC 61.113 66.667 0.00 0.00 0.00 4.30
2288 2617 1.130613 GCTAACAGCTGTTCGTGCG 59.869 57.895 34.29 18.76 38.45 5.34
2307 2636 0.930726 TTGGTGTTCCTGTTCCCCTT 59.069 50.000 0.00 0.00 34.23 3.95
2947 3310 3.635268 GAGGGAGGCCTGGCTTGTG 62.635 68.421 12.00 0.00 0.00 3.33
3117 3486 2.165845 GCTGGTCTGGTACGTACTGAAT 59.834 50.000 24.07 0.00 0.00 2.57
3118 3487 1.542915 GCTGGTCTGGTACGTACTGAA 59.457 52.381 24.07 10.27 0.00 3.02
3119 3488 1.171308 GCTGGTCTGGTACGTACTGA 58.829 55.000 24.07 18.73 0.00 3.41
3120 3489 1.174783 AGCTGGTCTGGTACGTACTG 58.825 55.000 24.07 16.93 0.00 2.74
3121 3490 2.641305 CTAGCTGGTCTGGTACGTACT 58.359 52.381 24.07 4.74 0.00 2.73
3122 3491 1.065251 GCTAGCTGGTCTGGTACGTAC 59.935 57.143 17.56 17.56 0.00 3.67
3123 3492 1.064906 AGCTAGCTGGTCTGGTACGTA 60.065 52.381 18.57 0.00 0.00 3.57
3124 3493 0.323542 AGCTAGCTGGTCTGGTACGT 60.324 55.000 18.57 0.00 0.00 3.57
3188 3557 1.737838 CGCTAACTCCTTTGGCATGA 58.262 50.000 0.00 0.00 41.73 3.07
3189 3558 0.099436 GCGCTAACTCCTTTGGCATG 59.901 55.000 0.00 0.00 41.73 4.06
3190 3559 0.322456 TGCGCTAACTCCTTTGGCAT 60.322 50.000 9.73 0.00 41.73 4.40
3191 3560 0.955428 CTGCGCTAACTCCTTTGGCA 60.955 55.000 9.73 0.00 41.73 4.92
3192 3561 1.648467 CCTGCGCTAACTCCTTTGGC 61.648 60.000 9.73 0.00 38.31 4.52
3194 3563 1.079503 GTCCTGCGCTAACTCCTTTG 58.920 55.000 9.73 0.00 0.00 2.77
3195 3564 0.685097 TGTCCTGCGCTAACTCCTTT 59.315 50.000 9.73 0.00 0.00 3.11
3474 3867 2.636403 ACCACTGGTACCTTAAGACACC 59.364 50.000 14.36 15.08 32.11 4.16
3542 3939 5.305644 GCCTTTTCTCCTCTATCATAGGTCA 59.694 44.000 0.00 0.00 35.48 4.02
3543 3940 5.279758 GGCCTTTTCTCCTCTATCATAGGTC 60.280 48.000 0.00 0.00 35.48 3.85
3544 3941 4.595350 GGCCTTTTCTCCTCTATCATAGGT 59.405 45.833 0.00 0.00 35.48 3.08
3546 3943 5.815233 TGGCCTTTTCTCCTCTATCATAG 57.185 43.478 3.32 0.00 0.00 2.23
3548 3945 4.749166 GCATGGCCTTTTCTCCTCTATCAT 60.749 45.833 3.32 0.00 0.00 2.45
3550 3947 3.145286 GCATGGCCTTTTCTCCTCTATC 58.855 50.000 3.32 0.00 0.00 2.08
3551 3948 2.782341 AGCATGGCCTTTTCTCCTCTAT 59.218 45.455 3.32 0.00 0.00 1.98
3552 3949 2.200081 AGCATGGCCTTTTCTCCTCTA 58.800 47.619 3.32 0.00 0.00 2.43
3600 4007 8.968969 TCCAATCAGTCATCATCTATCATAGAG 58.031 37.037 0.00 0.00 38.38 2.43
3634 4044 0.104855 GGTGCAGCATCGACCAGATA 59.895 55.000 11.86 0.00 37.52 1.98
3671 4081 9.917129 TCCATCATTAATTCATTATGCATTGTC 57.083 29.630 3.54 0.00 0.00 3.18
3675 4085 9.262240 TCCATCCATCATTAATTCATTATGCAT 57.738 29.630 3.79 3.79 0.00 3.96
3676 4086 8.653036 TCCATCCATCATTAATTCATTATGCA 57.347 30.769 0.00 0.00 0.00 3.96
3677 4087 9.362539 GTTCCATCCATCATTAATTCATTATGC 57.637 33.333 0.00 0.00 0.00 3.14
3681 4091 7.068593 ACACGTTCCATCCATCATTAATTCATT 59.931 33.333 0.00 0.00 0.00 2.57
3682 4092 6.547141 ACACGTTCCATCCATCATTAATTCAT 59.453 34.615 0.00 0.00 0.00 2.57
3683 4093 5.885352 ACACGTTCCATCCATCATTAATTCA 59.115 36.000 0.00 0.00 0.00 2.57
3684 4094 6.377327 ACACGTTCCATCCATCATTAATTC 57.623 37.500 0.00 0.00 0.00 2.17
3685 4095 6.017109 GCTACACGTTCCATCCATCATTAATT 60.017 38.462 0.00 0.00 0.00 1.40
3686 4096 5.470098 GCTACACGTTCCATCCATCATTAAT 59.530 40.000 0.00 0.00 0.00 1.40
3687 4097 4.814234 GCTACACGTTCCATCCATCATTAA 59.186 41.667 0.00 0.00 0.00 1.40
3705 4115 0.771127 AAAGGCAGTCCAAGGCTACA 59.229 50.000 0.00 0.00 41.47 2.74
3858 4281 3.592814 CCATGCTGCTGGCCATCG 61.593 66.667 5.51 0.00 40.92 3.84
3939 4367 2.353704 CGATCCACAGCAACCTCAGTAA 60.354 50.000 0.00 0.00 0.00 2.24
3945 4373 0.396435 TGTTCGATCCACAGCAACCT 59.604 50.000 0.00 0.00 0.00 3.50
4015 4942 0.386838 ACACCAAAGAAAGCAGCAGC 59.613 50.000 0.00 0.00 42.56 5.25
4016 4943 1.269413 CCACACCAAAGAAAGCAGCAG 60.269 52.381 0.00 0.00 0.00 4.24
4017 4944 0.746063 CCACACCAAAGAAAGCAGCA 59.254 50.000 0.00 0.00 0.00 4.41
4018 4945 1.032014 TCCACACCAAAGAAAGCAGC 58.968 50.000 0.00 0.00 0.00 5.25
4019 4946 2.624838 ACATCCACACCAAAGAAAGCAG 59.375 45.455 0.00 0.00 0.00 4.24
4035 4962 5.885230 TCTCAACATCAACATCAACATCC 57.115 39.130 0.00 0.00 0.00 3.51
4093 5024 5.833667 AGAGCAAGGTGTGTATAGTAGCATA 59.166 40.000 0.00 0.00 0.00 3.14
4132 5063 2.365293 CAAAGGACACCAAGGGGAAAAG 59.635 50.000 0.00 0.00 38.05 2.27
4137 5068 1.152567 TGCAAAGGACACCAAGGGG 60.153 57.895 0.00 0.00 41.29 4.79
4252 5184 3.136443 ACAGTTCCAAGAGACATGAACCA 59.864 43.478 0.00 0.00 38.24 3.67
4283 5215 0.742505 AACCATGCAAGATGATGGCG 59.257 50.000 1.60 0.00 42.67 5.69
4311 5243 1.351017 TGCCAAACCAAAACCAAACCA 59.649 42.857 0.00 0.00 0.00 3.67
4313 5245 2.675844 GTCTGCCAAACCAAAACCAAAC 59.324 45.455 0.00 0.00 0.00 2.93
4401 5333 9.764363 GAGTATGTTTATGTATGGATCTTGTGA 57.236 33.333 0.00 0.00 0.00 3.58
4402 5334 8.993121 GGAGTATGTTTATGTATGGATCTTGTG 58.007 37.037 0.00 0.00 0.00 3.33
4403 5335 8.938883 AGGAGTATGTTTATGTATGGATCTTGT 58.061 33.333 0.00 0.00 0.00 3.16
4406 5338 9.036980 GGTAGGAGTATGTTTATGTATGGATCT 57.963 37.037 0.00 0.00 0.00 2.75
4407 5339 9.036980 AGGTAGGAGTATGTTTATGTATGGATC 57.963 37.037 0.00 0.00 0.00 3.36
4410 5342 8.307483 CAGAGGTAGGAGTATGTTTATGTATGG 58.693 40.741 0.00 0.00 0.00 2.74
4411 5343 9.078990 TCAGAGGTAGGAGTATGTTTATGTATG 57.921 37.037 0.00 0.00 0.00 2.39
4413 5345 9.078990 CATCAGAGGTAGGAGTATGTTTATGTA 57.921 37.037 0.00 0.00 0.00 2.29
4414 5346 7.785028 TCATCAGAGGTAGGAGTATGTTTATGT 59.215 37.037 0.00 0.00 0.00 2.29
4415 5347 8.183104 TCATCAGAGGTAGGAGTATGTTTATG 57.817 38.462 0.00 0.00 0.00 1.90
4416 5348 8.811017 CATCATCAGAGGTAGGAGTATGTTTAT 58.189 37.037 0.00 0.00 0.00 1.40
4417 5349 8.004801 TCATCATCAGAGGTAGGAGTATGTTTA 58.995 37.037 0.00 0.00 0.00 2.01
4418 5350 6.841229 TCATCATCAGAGGTAGGAGTATGTTT 59.159 38.462 0.00 0.00 0.00 2.83
4419 5351 6.377080 TCATCATCAGAGGTAGGAGTATGTT 58.623 40.000 0.00 0.00 0.00 2.71
4420 5352 5.958321 TCATCATCAGAGGTAGGAGTATGT 58.042 41.667 0.00 0.00 0.00 2.29
4421 5353 7.039152 ACAATCATCATCAGAGGTAGGAGTATG 60.039 40.741 0.00 0.00 0.00 2.39
4422 5354 7.015680 ACAATCATCATCAGAGGTAGGAGTAT 58.984 38.462 0.00 0.00 0.00 2.12
4423 5355 6.266330 CACAATCATCATCAGAGGTAGGAGTA 59.734 42.308 0.00 0.00 0.00 2.59
4424 5356 5.070180 CACAATCATCATCAGAGGTAGGAGT 59.930 44.000 0.00 0.00 0.00 3.85
4425 5357 5.070180 ACACAATCATCATCAGAGGTAGGAG 59.930 44.000 0.00 0.00 0.00 3.69
4426 5358 4.964897 ACACAATCATCATCAGAGGTAGGA 59.035 41.667 0.00 0.00 0.00 2.94
4427 5359 5.163374 TGACACAATCATCATCAGAGGTAGG 60.163 44.000 0.00 0.00 29.99 3.18
4428 5360 5.910614 TGACACAATCATCATCAGAGGTAG 58.089 41.667 0.00 0.00 29.99 3.18
4429 5361 5.937975 TGACACAATCATCATCAGAGGTA 57.062 39.130 0.00 0.00 29.99 3.08
4430 5362 4.831674 TGACACAATCATCATCAGAGGT 57.168 40.909 0.00 0.00 29.99 3.85
4431 5363 5.413523 TGTTTGACACAATCATCATCAGAGG 59.586 40.000 0.00 0.00 37.11 3.69
4432 5364 6.490566 TGTTTGACACAATCATCATCAGAG 57.509 37.500 0.00 0.00 37.11 3.35
4445 5377 6.941730 TCGTAAGCACCAGTGTTTGACACA 62.942 45.833 13.09 0.00 44.72 3.72
4449 5381 2.605837 TCGTAAGCACCAGTGTTTGA 57.394 45.000 9.78 0.00 35.63 2.69
4453 5385 2.831685 TCAATCGTAAGCACCAGTGT 57.168 45.000 0.00 0.00 37.18 3.55
4636 5573 7.769220 CAAGCAATCTTGTGAGAGGAAATTAT 58.231 34.615 0.00 0.00 43.55 1.28
4639 5576 5.640189 CAAGCAATCTTGTGAGAGGAAAT 57.360 39.130 0.00 0.00 43.55 2.17
4966 5914 2.821366 GCATGCACTCCTCCACCG 60.821 66.667 14.21 0.00 0.00 4.94
5108 6056 0.324738 TGACCTTGAGGAGCTCGGAT 60.325 55.000 7.83 0.00 38.94 4.18
5219 6183 1.248785 GCCTCAGTCAGTACGGGACA 61.249 60.000 18.73 3.15 37.74 4.02
5438 6402 2.285818 ATGTAGTTGGGGCCGGGA 60.286 61.111 2.18 0.00 0.00 5.14
5607 6571 9.751542 GATCTTCGATTCAAGAGAGGTTAATTA 57.248 33.333 0.00 0.00 35.83 1.40
5608 6572 7.436673 CGATCTTCGATTCAAGAGAGGTTAATT 59.563 37.037 0.00 0.00 43.74 1.40
5609 6573 6.920758 CGATCTTCGATTCAAGAGAGGTTAAT 59.079 38.462 0.00 0.00 43.74 1.40
5610 6574 6.095021 TCGATCTTCGATTCAAGAGAGGTTAA 59.905 38.462 0.00 0.00 44.82 2.01
5611 6575 5.589050 TCGATCTTCGATTCAAGAGAGGTTA 59.411 40.000 0.00 0.00 44.82 2.85
5657 6622 8.752005 ACCACATACTGTAGCATGAATTTTAT 57.248 30.769 0.00 0.00 0.00 1.40
5680 6645 3.813724 GACAGAAAAGGACCACTTGTACC 59.186 47.826 0.00 0.00 39.96 3.34
5686 6651 4.200092 GTTTCTGACAGAAAAGGACCACT 58.800 43.478 27.85 0.00 44.84 4.00
5867 6836 8.767085 CCAACTTGTCTAGAAAACGTACAATAA 58.233 33.333 0.00 0.00 30.33 1.40
5868 6837 7.927629 ACCAACTTGTCTAGAAAACGTACAATA 59.072 33.333 0.00 0.00 30.33 1.90
5869 6838 6.764560 ACCAACTTGTCTAGAAAACGTACAAT 59.235 34.615 0.00 0.00 30.33 2.71
5870 6839 6.036300 CACCAACTTGTCTAGAAAACGTACAA 59.964 38.462 0.00 0.00 0.00 2.41
5871 6840 5.521010 CACCAACTTGTCTAGAAAACGTACA 59.479 40.000 0.00 0.00 0.00 2.90
5985 6989 1.620819 AGGGACATGTGTCTGTCTGTC 59.379 52.381 1.15 0.00 44.05 3.51
5987 6991 2.847327 AAGGGACATGTGTCTGTCTG 57.153 50.000 1.15 0.00 44.05 3.51
6003 7007 6.816640 TCGTCCATTGACTTTATGTAGAAAGG 59.183 38.462 4.29 0.00 40.17 3.11
6011 7015 8.214472 CGTATGTATTCGTCCATTGACTTTATG 58.786 37.037 0.00 0.00 39.47 1.90
6043 7049 6.149474 ACAAGGAACATAGTTTATGCACAGTC 59.851 38.462 0.00 0.00 39.79 3.51
6094 7102 2.028043 GGCTGGCACAAGCACAAC 59.972 61.111 0.00 0.00 44.61 3.32
6095 7103 2.441717 TGGCTGGCACAAGCACAA 60.442 55.556 0.00 0.00 44.61 3.33
6098 7106 0.323633 ATATGTGGCTGGCACAAGCA 60.324 50.000 35.52 24.60 44.61 3.91
6099 7107 0.383231 GATATGTGGCTGGCACAAGC 59.617 55.000 35.52 23.93 38.70 4.01
6100 7108 1.027357 GGATATGTGGCTGGCACAAG 58.973 55.000 35.52 0.00 38.70 3.16
6126 7134 5.335976 GCAAACAGAGGAGGGAATAAAACAG 60.336 44.000 0.00 0.00 0.00 3.16
6185 7198 4.640647 GCCTCCAAGGATACGATTTTTCTT 59.359 41.667 0.00 0.00 46.39 2.52
6283 7297 1.003580 GGCTGTGTCCTTTCCTGATGA 59.996 52.381 0.00 0.00 0.00 2.92
6290 7304 2.561478 TTAGGTGGCTGTGTCCTTTC 57.439 50.000 0.00 0.00 33.34 2.62
6322 7339 0.321671 TTCTTCAAGGCTCCTGTCCG 59.678 55.000 0.00 0.00 0.00 4.79
6362 7379 5.888724 TGTTTTTCCTACACTTGTGATGGAA 59.111 36.000 19.22 19.22 34.23 3.53
6441 7460 5.627735 GCACAATGGAGGTCTCAATCTTCTA 60.628 44.000 0.14 0.00 0.00 2.10
6508 7527 4.104776 CACAAACCGCAATCAACATATCC 58.895 43.478 0.00 0.00 0.00 2.59
6557 7576 9.573166 AGTAGAATTATTAATTGCCTGCATACA 57.427 29.630 6.38 0.00 0.00 2.29
6621 7644 5.414789 TCCATTCACCATCTTTTCGTAGA 57.585 39.130 0.00 0.00 0.00 2.59
6625 7648 7.320443 TCTAAATCCATTCACCATCTTTTCG 57.680 36.000 0.00 0.00 0.00 3.46
6709 7733 4.529377 TCCTGTAGTACCCCTAACAAGTTG 59.471 45.833 0.00 0.00 0.00 3.16
6710 7734 4.755437 TCCTGTAGTACCCCTAACAAGTT 58.245 43.478 0.00 0.00 0.00 2.66
6712 7736 5.021458 TCTTCCTGTAGTACCCCTAACAAG 58.979 45.833 0.00 0.00 0.00 3.16
6720 7744 8.483758 TCATTCTTTTATCTTCCTGTAGTACCC 58.516 37.037 0.00 0.00 0.00 3.69
6721 7745 9.535878 CTCATTCTTTTATCTTCCTGTAGTACC 57.464 37.037 0.00 0.00 0.00 3.34
6741 7765 9.844790 TGTGATCATGTTTATTTTGACTCATTC 57.155 29.630 0.00 0.00 0.00 2.67
6744 7768 9.012161 TGATGTGATCATGTTTATTTTGACTCA 57.988 29.630 0.00 0.00 33.59 3.41
6745 7769 9.499585 CTGATGTGATCATGTTTATTTTGACTC 57.500 33.333 0.00 0.00 38.85 3.36
6746 7770 7.972277 GCTGATGTGATCATGTTTATTTTGACT 59.028 33.333 0.00 0.00 38.85 3.41
6747 7771 7.221452 GGCTGATGTGATCATGTTTATTTTGAC 59.779 37.037 0.00 0.00 38.85 3.18
6748 7772 7.093858 TGGCTGATGTGATCATGTTTATTTTGA 60.094 33.333 0.00 0.00 38.85 2.69
6749 7773 7.036829 TGGCTGATGTGATCATGTTTATTTTG 58.963 34.615 0.00 0.00 38.85 2.44
6750 7774 7.172868 TGGCTGATGTGATCATGTTTATTTT 57.827 32.000 0.00 0.00 38.85 1.82
7364 8388 5.241506 TGGCATAACAGAAAAAGTTGAGGAG 59.758 40.000 0.00 0.00 0.00 3.69
7367 8391 6.925165 ACATTGGCATAACAGAAAAAGTTGAG 59.075 34.615 0.00 0.00 0.00 3.02
7372 8396 8.816640 ACTTAACATTGGCATAACAGAAAAAG 57.183 30.769 0.00 0.00 0.00 2.27
7377 8401 4.947388 GGGACTTAACATTGGCATAACAGA 59.053 41.667 0.00 0.00 0.00 3.41
7378 8402 4.704540 TGGGACTTAACATTGGCATAACAG 59.295 41.667 0.00 0.00 0.00 3.16
7379 8403 4.461081 GTGGGACTTAACATTGGCATAACA 59.539 41.667 0.00 0.00 0.00 2.41
7380 8404 4.461081 TGTGGGACTTAACATTGGCATAAC 59.539 41.667 0.00 0.00 0.00 1.89
7381 8405 4.461081 GTGTGGGACTTAACATTGGCATAA 59.539 41.667 0.00 0.00 0.00 1.90
7383 8407 2.825532 GTGTGGGACTTAACATTGGCAT 59.174 45.455 0.00 0.00 0.00 4.40
7384 8408 2.235016 GTGTGGGACTTAACATTGGCA 58.765 47.619 0.00 0.00 0.00 4.92
7385 8409 1.199097 CGTGTGGGACTTAACATTGGC 59.801 52.381 0.00 0.00 0.00 4.52
7386 8410 2.773487 TCGTGTGGGACTTAACATTGG 58.227 47.619 0.00 0.00 0.00 3.16
7387 8411 4.000325 TGATCGTGTGGGACTTAACATTG 59.000 43.478 0.00 0.00 0.00 2.82
7418 8453 6.631016 TGCGAGAGTTTATTCTAATGTGACT 58.369 36.000 0.00 0.00 0.00 3.41
7429 8464 6.634805 TCAGATCTTCTTGCGAGAGTTTATT 58.365 36.000 3.32 0.00 32.44 1.40
7434 8469 3.367910 GGTTCAGATCTTCTTGCGAGAGT 60.368 47.826 3.32 0.00 32.44 3.24
7436 8471 2.562738 TGGTTCAGATCTTCTTGCGAGA 59.437 45.455 0.00 0.00 0.00 4.04
7439 8474 2.159787 CGTTGGTTCAGATCTTCTTGCG 60.160 50.000 0.00 0.00 0.00 4.85
7442 8477 3.071023 TGGACGTTGGTTCAGATCTTCTT 59.929 43.478 0.00 0.00 0.00 2.52
7443 8478 2.632996 TGGACGTTGGTTCAGATCTTCT 59.367 45.455 0.00 0.00 0.00 2.85
7444 8479 3.040147 TGGACGTTGGTTCAGATCTTC 57.960 47.619 0.00 0.00 0.00 2.87
7458 8493 4.122776 CTGCTATATTCTGCTTTGGACGT 58.877 43.478 0.00 0.00 0.00 4.34
7463 8498 7.307694 TGTTTTCACTGCTATATTCTGCTTTG 58.692 34.615 0.00 0.00 0.00 2.77
7507 8542 3.538780 CATTATCAAGATTGTGCGAGCG 58.461 45.455 0.00 0.00 0.00 5.03
7508 8543 3.294943 GCATTATCAAGATTGTGCGAGC 58.705 45.455 0.00 0.00 0.00 5.03
7564 8599 1.659098 GGCTAGGAATTTGACACGACG 59.341 52.381 0.00 0.00 0.00 5.12
7833 8868 8.762481 AAACAGGGAAAAACTAAGAATACAGT 57.238 30.769 0.00 0.00 0.00 3.55
7836 8871 9.063615 TCTGAAACAGGGAAAAACTAAGAATAC 57.936 33.333 0.00 0.00 31.51 1.89
7890 8927 2.496070 ACAGCTAATAAGTGACTCGCCA 59.504 45.455 0.00 0.00 0.00 5.69
7908 8945 6.761242 TGTGTCGAATCCCTATAAATGAACAG 59.239 38.462 0.00 0.00 0.00 3.16
7917 8954 3.244078 GGCACATGTGTCGAATCCCTATA 60.244 47.826 26.01 0.00 0.00 1.31
7991 9035 3.115554 GTCGGCCATGTTCAATTTATGC 58.884 45.455 2.24 0.00 0.00 3.14
7992 9036 4.368874 TGTCGGCCATGTTCAATTTATG 57.631 40.909 2.24 0.00 0.00 1.90
7993 9037 5.126869 TCATTGTCGGCCATGTTCAATTTAT 59.873 36.000 2.24 0.00 0.00 1.40
7995 9039 3.257873 TCATTGTCGGCCATGTTCAATTT 59.742 39.130 2.24 0.00 0.00 1.82
7998 9042 1.539388 GTCATTGTCGGCCATGTTCAA 59.461 47.619 2.24 0.35 0.00 2.69
8089 9133 1.271543 TGCTGCTGCATTCCTTGTAGT 60.272 47.619 14.93 0.00 45.31 2.73
8116 9160 1.129437 GAGAACTGATTCTGTTGCGGC 59.871 52.381 12.94 0.00 45.60 6.53
8149 9193 0.537653 GTTACACCCTCCAGGAGAGC 59.462 60.000 19.21 0.00 41.74 4.09
8150 9194 0.818296 CGTTACACCCTCCAGGAGAG 59.182 60.000 19.21 7.34 42.83 3.20
8275 9319 1.841103 ACCCCAACAATTGCCACCC 60.841 57.895 5.05 0.00 0.00 4.61
8278 9322 1.340399 TTGCACCCCAACAATTGCCA 61.340 50.000 5.05 0.00 33.86 4.92
8400 9444 3.200593 GCAGCCACGCATCTCCTG 61.201 66.667 0.00 0.00 0.00 3.86
8577 9622 9.844790 TGACAGTTGATCTTAAATTATTGCTTG 57.155 29.630 0.00 0.00 0.00 4.01
8596 9641 6.250527 CGTCGTTTTCTTTTGATTTGACAGTT 59.749 34.615 0.00 0.00 0.00 3.16
8610 9655 0.850856 GCTGTCGTCGTCGTTTTCTT 59.149 50.000 1.33 0.00 38.33 2.52
8623 9668 7.218773 CCTTAATTGTTTGTTGATATGCTGTCG 59.781 37.037 0.00 0.00 0.00 4.35
8624 9669 8.243426 TCCTTAATTGTTTGTTGATATGCTGTC 58.757 33.333 0.00 0.00 0.00 3.51
8656 9701 2.420547 GGCATCATCTGTAACCTGCAGA 60.421 50.000 17.39 0.00 45.59 4.26
8675 9720 3.059597 CGTTTTCCATCTGTGATATCGGC 60.060 47.826 0.00 0.00 0.00 5.54
8697 9742 8.964476 TTATGGTTTCCATGTAATCTTCTCTC 57.036 34.615 11.04 0.00 44.84 3.20
8732 9777 1.653094 GGCACATTTTCATCGGCGGA 61.653 55.000 7.21 0.00 0.00 5.54
8767 9812 1.538512 CACTGACTTGTCCTGGCATTG 59.461 52.381 0.00 0.00 0.00 2.82
8772 9817 1.971357 AGTACCACTGACTTGTCCTGG 59.029 52.381 11.03 11.03 0.00 4.45
8784 9829 5.221641 TGCTGATTGTTTCTACAGTACCACT 60.222 40.000 0.00 0.00 35.28 4.00
8785 9830 4.994852 TGCTGATTGTTTCTACAGTACCAC 59.005 41.667 0.00 0.00 35.28 4.16
8786 9831 5.222079 TGCTGATTGTTTCTACAGTACCA 57.778 39.130 0.00 0.00 35.28 3.25
8788 9833 8.076178 ACAATTTGCTGATTGTTTCTACAGTAC 58.924 33.333 11.02 0.00 45.38 2.73
8789 9834 8.165239 ACAATTTGCTGATTGTTTCTACAGTA 57.835 30.769 11.02 0.00 45.38 2.74
8803 9848 5.008619 TCTTTTGCTCAACAATTTGCTGA 57.991 34.783 2.73 2.73 38.31 4.26
8806 9851 5.163774 TGGTTTCTTTTGCTCAACAATTTGC 60.164 36.000 0.00 0.00 38.31 3.68
8808 9853 6.822676 TCATGGTTTCTTTTGCTCAACAATTT 59.177 30.769 0.00 0.00 38.31 1.82
8810 9855 5.916318 TCATGGTTTCTTTTGCTCAACAAT 58.084 33.333 0.00 0.00 38.31 2.71
8813 9858 6.042143 TCTTTCATGGTTTCTTTTGCTCAAC 58.958 36.000 0.00 0.00 0.00 3.18
8849 9894 4.388773 TGTGTTGCTTAACATCGCTCTTAG 59.611 41.667 0.00 0.00 34.86 2.18
8869 9914 0.041400 TTGCGCTGTTTCGACATGTG 60.041 50.000 9.73 0.00 0.00 3.21
8886 9931 6.222389 TGTTTTATTCATGCAAGGTTCCTTG 58.778 36.000 22.75 22.75 44.35 3.61
8919 9964 2.338809 TCAGGTGTGAACCTCCATCTT 58.661 47.619 0.00 0.00 38.22 2.40
8927 9972 5.551760 CATCTGTTTATCAGGTGTGAACC 57.448 43.478 0.58 0.00 46.77 3.62
9008 10077 0.588252 CTGACAACAGTTCCGGCTTG 59.412 55.000 0.00 0.00 39.11 4.01
9009 10078 0.535102 CCTGACAACAGTTCCGGCTT 60.535 55.000 0.00 0.00 42.05 4.35
9019 10088 1.400142 CAAGTTTCACGCCTGACAACA 59.600 47.619 10.69 0.00 0.00 3.33
9024 10093 0.537143 ATGGCAAGTTTCACGCCTGA 60.537 50.000 0.00 0.00 46.39 3.86
9051 10120 2.029623 GCTGCATGGTTGGAATGATCT 58.970 47.619 0.00 0.00 0.00 2.75
9052 10121 2.029623 AGCTGCATGGTTGGAATGATC 58.970 47.619 1.02 0.00 0.00 2.92
9055 10124 1.134367 CTGAGCTGCATGGTTGGAATG 59.866 52.381 1.02 0.00 0.00 2.67
9056 10125 1.005097 TCTGAGCTGCATGGTTGGAAT 59.995 47.619 1.02 0.00 0.00 3.01
9057 10126 0.401356 TCTGAGCTGCATGGTTGGAA 59.599 50.000 1.02 0.00 0.00 3.53
9058 10127 0.401356 TTCTGAGCTGCATGGTTGGA 59.599 50.000 1.02 0.00 0.00 3.53
9059 10128 1.471119 ATTCTGAGCTGCATGGTTGG 58.529 50.000 1.02 0.00 0.00 3.77
9060 10129 2.490509 TGAATTCTGAGCTGCATGGTTG 59.509 45.455 7.05 0.00 0.00 3.77
9061 10130 2.799017 TGAATTCTGAGCTGCATGGTT 58.201 42.857 7.05 0.00 0.00 3.67
9062 10131 2.502142 TGAATTCTGAGCTGCATGGT 57.498 45.000 7.05 0.00 0.00 3.55
9063 10132 3.632604 AGATTGAATTCTGAGCTGCATGG 59.367 43.478 7.05 0.00 0.00 3.66
9115 10184 7.452880 TTTCATCCTTTTAACCATCTGTCTG 57.547 36.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.