Multiple sequence alignment - TraesCS3B01G403400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G403400 chr3B 100.000 3584 0 0 1 3584 637337786 637334203 0.000000e+00 6619.0
1 TraesCS3B01G403400 chr3B 91.277 470 33 4 3123 3584 497807460 497806991 5.050000e-178 634.0
2 TraesCS3B01G403400 chr3D 93.605 2971 112 31 214 3123 478062981 478060028 0.000000e+00 4362.0
3 TraesCS3B01G403400 chr3D 80.814 172 31 2 35 204 4658727 4658556 2.240000e-27 134.0
4 TraesCS3B01G403400 chr3D 80.588 170 27 6 45 210 326554368 326554535 3.760000e-25 126.0
5 TraesCS3B01G403400 chr3D 90.123 81 6 1 1626 1706 108278561 108278483 1.760000e-18 104.0
6 TraesCS3B01G403400 chr3A 92.029 2760 108 34 236 2937 621514775 621517480 0.000000e+00 3775.0
7 TraesCS3B01G403400 chr3A 86.061 165 11 7 2968 3122 621517479 621517641 2.210000e-37 167.0
8 TraesCS3B01G403400 chr1A 83.841 1510 202 29 1076 2555 472550441 472551938 0.000000e+00 1399.0
9 TraesCS3B01G403400 chr1D 83.333 1506 213 27 1076 2553 373116147 373117642 0.000000e+00 1356.0
10 TraesCS3B01G403400 chr1B 83.023 1502 223 23 1076 2552 498063516 498065010 0.000000e+00 1332.0
11 TraesCS3B01G403400 chr7D 93.133 466 26 4 3123 3584 336131780 336132243 0.000000e+00 678.0
12 TraesCS3B01G403400 chr7D 91.139 474 33 6 3119 3583 536044408 536044881 5.050000e-178 634.0
13 TraesCS3B01G403400 chr7D 80.663 181 30 5 23 200 49228520 49228342 6.240000e-28 135.0
14 TraesCS3B01G403400 chr7D 89.062 64 7 0 1059 1122 426500574 426500511 2.970000e-11 80.5
15 TraesCS3B01G403400 chr6D 91.932 471 32 5 3120 3584 310910479 310910949 0.000000e+00 654.0
16 TraesCS3B01G403400 chr6D 91.828 465 29 7 3123 3579 465320261 465320724 1.080000e-179 640.0
17 TraesCS3B01G403400 chr6D 90.776 477 35 5 3116 3584 357132585 357133060 2.350000e-176 628.0
18 TraesCS3B01G403400 chr4A 91.525 472 32 7 3120 3584 537461217 537461687 0.000000e+00 643.0
19 TraesCS3B01G403400 chr4A 73.589 1435 303 50 1148 2539 461354077 461355478 6.960000e-132 481.0
20 TraesCS3B01G403400 chr4A 80.625 160 27 4 44 200 713901576 713901734 1.750000e-23 121.0
21 TraesCS3B01G403400 chr5D 91.139 474 34 5 3114 3579 380661456 380660983 1.400000e-178 636.0
22 TraesCS3B01G403400 chr5B 91.471 469 31 7 3123 3584 642461893 642462359 1.400000e-178 636.0
23 TraesCS3B01G403400 chr4D 73.957 1390 294 43 1187 2539 115543707 115542349 1.920000e-137 499.0
24 TraesCS3B01G403400 chr4D 89.268 205 21 1 1 204 413035732 413035528 4.590000e-64 255.0
25 TraesCS3B01G403400 chr2D 71.978 1299 277 66 1160 2425 618532213 618530969 5.820000e-78 302.0
26 TraesCS3B01G403400 chr2D 71.926 1236 262 65 1233 2436 618645451 618646633 7.580000e-72 281.0
27 TraesCS3B01G403400 chr7A 80.000 190 34 4 18 203 162734838 162735027 1.740000e-28 137.0
28 TraesCS3B01G403400 chr7B 88.991 109 12 0 1046 1154 443705464 443705356 6.240000e-28 135.0
29 TraesCS3B01G403400 chr5A 80.000 180 30 5 23 200 361363761 361363936 1.040000e-25 128.0
30 TraesCS3B01G403400 chr2B 80.000 160 27 5 45 200 17896143 17895985 2.920000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G403400 chr3B 637334203 637337786 3583 True 6619 6619 100.000 1 3584 1 chr3B.!!$R2 3583
1 TraesCS3B01G403400 chr3D 478060028 478062981 2953 True 4362 4362 93.605 214 3123 1 chr3D.!!$R3 2909
2 TraesCS3B01G403400 chr3A 621514775 621517641 2866 False 1971 3775 89.045 236 3122 2 chr3A.!!$F1 2886
3 TraesCS3B01G403400 chr1A 472550441 472551938 1497 False 1399 1399 83.841 1076 2555 1 chr1A.!!$F1 1479
4 TraesCS3B01G403400 chr1D 373116147 373117642 1495 False 1356 1356 83.333 1076 2553 1 chr1D.!!$F1 1477
5 TraesCS3B01G403400 chr1B 498063516 498065010 1494 False 1332 1332 83.023 1076 2552 1 chr1B.!!$F1 1476
6 TraesCS3B01G403400 chr4A 461354077 461355478 1401 False 481 481 73.589 1148 2539 1 chr4A.!!$F1 1391
7 TraesCS3B01G403400 chr4D 115542349 115543707 1358 True 499 499 73.957 1187 2539 1 chr4D.!!$R1 1352
8 TraesCS3B01G403400 chr2D 618530969 618532213 1244 True 302 302 71.978 1160 2425 1 chr2D.!!$R1 1265
9 TraesCS3B01G403400 chr2D 618645451 618646633 1182 False 281 281 71.926 1233 2436 1 chr2D.!!$F1 1203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.182537 CGGGCCCCATCTGTCATAAA 59.817 55.0 18.66 0.0 0.0 1.40 F
835 883 0.182775 ATGCCCATAACCGTCCTTCC 59.817 55.0 0.00 0.0 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 1821 0.877071 GCCATATGATCTGCAACGGG 59.123 55.0 3.65 0.0 0.0 5.28 R
2599 2725 0.243907 CGATCGTCAGGACACCAACT 59.756 55.0 7.03 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.694886 GTTATATTTGAGAGGTTAAGTGGTGC 58.305 38.462 0.00 0.00 0.00 5.01
26 27 2.561478 TTGAGAGGTTAAGTGGTGCC 57.439 50.000 0.00 0.00 0.00 5.01
27 28 1.429930 TGAGAGGTTAAGTGGTGCCA 58.570 50.000 0.00 0.00 0.00 4.92
28 29 1.771854 TGAGAGGTTAAGTGGTGCCAA 59.228 47.619 0.00 0.00 0.00 4.52
29 30 2.224523 TGAGAGGTTAAGTGGTGCCAAG 60.225 50.000 0.00 0.00 0.00 3.61
30 31 1.774856 AGAGGTTAAGTGGTGCCAAGT 59.225 47.619 0.00 0.00 0.00 3.16
31 32 1.880027 GAGGTTAAGTGGTGCCAAGTG 59.120 52.381 0.00 0.00 0.00 3.16
32 33 1.493022 AGGTTAAGTGGTGCCAAGTGA 59.507 47.619 0.00 0.00 0.00 3.41
33 34 1.880027 GGTTAAGTGGTGCCAAGTGAG 59.120 52.381 0.00 0.00 0.00 3.51
34 35 1.266989 GTTAAGTGGTGCCAAGTGAGC 59.733 52.381 0.00 0.00 0.00 4.26
35 36 0.250727 TAAGTGGTGCCAAGTGAGCC 60.251 55.000 0.00 0.00 0.00 4.70
36 37 1.999634 AAGTGGTGCCAAGTGAGCCT 62.000 55.000 0.00 0.00 0.00 4.58
37 38 2.113774 TGGTGCCAAGTGAGCCTG 59.886 61.111 0.00 0.00 0.00 4.85
38 39 2.431683 GGTGCCAAGTGAGCCTGA 59.568 61.111 0.00 0.00 0.00 3.86
39 40 1.968540 GGTGCCAAGTGAGCCTGAC 60.969 63.158 0.00 0.00 0.00 3.51
40 41 1.072159 GTGCCAAGTGAGCCTGACT 59.928 57.895 0.00 0.00 0.00 3.41
41 42 1.071987 TGCCAAGTGAGCCTGACTG 59.928 57.895 0.00 0.00 0.00 3.51
42 43 1.673665 GCCAAGTGAGCCTGACTGG 60.674 63.158 0.00 0.00 39.35 4.00
59 60 4.195334 GCGGGCCCCATCTGTCAT 62.195 66.667 18.66 0.00 0.00 3.06
60 61 2.818169 GCGGGCCCCATCTGTCATA 61.818 63.158 18.66 0.00 0.00 2.15
61 62 1.836391 CGGGCCCCATCTGTCATAA 59.164 57.895 18.66 0.00 0.00 1.90
62 63 0.182537 CGGGCCCCATCTGTCATAAA 59.817 55.000 18.66 0.00 0.00 1.40
63 64 1.202927 CGGGCCCCATCTGTCATAAAT 60.203 52.381 18.66 0.00 0.00 1.40
64 65 2.242043 GGGCCCCATCTGTCATAAATG 58.758 52.381 12.23 0.00 0.00 2.32
65 66 1.615392 GGCCCCATCTGTCATAAATGC 59.385 52.381 0.00 0.00 0.00 3.56
66 67 2.309613 GCCCCATCTGTCATAAATGCA 58.690 47.619 0.00 0.00 0.00 3.96
67 68 2.035066 GCCCCATCTGTCATAAATGCAC 59.965 50.000 0.00 0.00 0.00 4.57
68 69 3.559069 CCCCATCTGTCATAAATGCACT 58.441 45.455 0.00 0.00 0.00 4.40
69 70 3.956199 CCCCATCTGTCATAAATGCACTT 59.044 43.478 0.00 0.00 0.00 3.16
70 71 5.132502 CCCCATCTGTCATAAATGCACTTA 58.867 41.667 0.00 0.00 0.00 2.24
71 72 5.593909 CCCCATCTGTCATAAATGCACTTAA 59.406 40.000 0.00 0.00 0.00 1.85
72 73 6.460123 CCCCATCTGTCATAAATGCACTTAAC 60.460 42.308 0.00 0.00 0.00 2.01
73 74 6.460123 CCCATCTGTCATAAATGCACTTAACC 60.460 42.308 0.00 0.00 0.00 2.85
74 75 5.794687 TCTGTCATAAATGCACTTAACCG 57.205 39.130 0.00 0.00 0.00 4.44
75 76 5.483811 TCTGTCATAAATGCACTTAACCGA 58.516 37.500 0.00 0.00 0.00 4.69
76 77 5.580691 TCTGTCATAAATGCACTTAACCGAG 59.419 40.000 0.00 0.00 0.00 4.63
77 78 5.242434 TGTCATAAATGCACTTAACCGAGT 58.758 37.500 0.00 0.00 0.00 4.18
78 79 5.350365 TGTCATAAATGCACTTAACCGAGTC 59.650 40.000 0.00 0.00 0.00 3.36
79 80 4.873827 TCATAAATGCACTTAACCGAGTCC 59.126 41.667 0.00 0.00 0.00 3.85
80 81 1.722011 AATGCACTTAACCGAGTCCG 58.278 50.000 0.00 0.00 0.00 4.79
81 82 0.892755 ATGCACTTAACCGAGTCCGA 59.107 50.000 0.00 0.00 38.22 4.55
82 83 0.892755 TGCACTTAACCGAGTCCGAT 59.107 50.000 0.00 0.00 38.22 4.18
83 84 1.135199 TGCACTTAACCGAGTCCGATC 60.135 52.381 0.00 0.00 38.22 3.69
84 85 1.801765 GCACTTAACCGAGTCCGATCC 60.802 57.143 0.00 0.00 38.22 3.36
85 86 0.737219 ACTTAACCGAGTCCGATCCG 59.263 55.000 0.00 0.00 38.22 4.18
86 87 0.594284 CTTAACCGAGTCCGATCCGC 60.594 60.000 0.00 0.00 38.22 5.54
87 88 2.008268 TTAACCGAGTCCGATCCGCC 62.008 60.000 0.00 0.00 38.22 6.13
90 91 3.661131 CGAGTCCGATCCGCCGAT 61.661 66.667 0.00 0.00 38.22 4.18
91 92 2.255856 GAGTCCGATCCGCCGATC 59.744 66.667 5.09 5.09 41.43 3.69
92 93 2.518587 AGTCCGATCCGCCGATCA 60.519 61.111 14.20 0.00 44.55 2.92
93 94 2.049985 GTCCGATCCGCCGATCAG 60.050 66.667 14.20 4.21 44.55 2.90
94 95 2.518587 TCCGATCCGCCGATCAGT 60.519 61.111 14.20 0.00 44.55 3.41
95 96 2.355126 CCGATCCGCCGATCAGTG 60.355 66.667 14.20 0.00 44.55 3.66
96 97 2.413351 CGATCCGCCGATCAGTGT 59.587 61.111 14.20 0.00 44.55 3.55
97 98 1.226974 CGATCCGCCGATCAGTGTT 60.227 57.895 14.20 0.00 44.55 3.32
98 99 0.806102 CGATCCGCCGATCAGTGTTT 60.806 55.000 14.20 0.00 44.55 2.83
99 100 1.369625 GATCCGCCGATCAGTGTTTT 58.630 50.000 9.80 0.00 43.87 2.43
100 101 1.737793 GATCCGCCGATCAGTGTTTTT 59.262 47.619 9.80 0.00 43.87 1.94
181 182 8.411991 TTTTGTAAACCTATCCTTTAAGGTGG 57.588 34.615 11.13 13.37 45.51 4.61
182 183 6.707273 TGTAAACCTATCCTTTAAGGTGGT 57.293 37.500 11.13 13.95 45.51 4.16
183 184 6.478129 TGTAAACCTATCCTTTAAGGTGGTG 58.522 40.000 19.69 8.54 45.51 4.17
184 185 4.586306 AACCTATCCTTTAAGGTGGTGG 57.414 45.455 19.69 15.45 45.51 4.61
185 186 3.538387 ACCTATCCTTTAAGGTGGTGGT 58.462 45.455 18.83 15.47 44.53 4.16
186 187 3.920841 ACCTATCCTTTAAGGTGGTGGTT 59.079 43.478 18.83 5.48 44.53 3.67
187 188 4.355889 ACCTATCCTTTAAGGTGGTGGTTT 59.644 41.667 18.83 2.00 44.53 3.27
188 189 5.162914 ACCTATCCTTTAAGGTGGTGGTTTT 60.163 40.000 18.83 1.48 44.53 2.43
189 190 5.185056 CCTATCCTTTAAGGTGGTGGTTTTG 59.815 44.000 11.13 0.00 36.53 2.44
190 191 3.983821 TCCTTTAAGGTGGTGGTTTTGT 58.016 40.909 11.13 0.00 36.53 2.83
191 192 3.702045 TCCTTTAAGGTGGTGGTTTTGTG 59.298 43.478 11.13 0.00 36.53 3.33
192 193 3.453424 CTTTAAGGTGGTGGTTTTGTGC 58.547 45.455 0.00 0.00 0.00 4.57
193 194 2.145397 TAAGGTGGTGGTTTTGTGCA 57.855 45.000 0.00 0.00 0.00 4.57
194 195 1.270907 AAGGTGGTGGTTTTGTGCAA 58.729 45.000 0.00 0.00 0.00 4.08
195 196 1.494960 AGGTGGTGGTTTTGTGCAAT 58.505 45.000 0.00 0.00 0.00 3.56
196 197 1.836802 AGGTGGTGGTTTTGTGCAATT 59.163 42.857 0.00 0.00 0.00 2.32
197 198 2.238395 AGGTGGTGGTTTTGTGCAATTT 59.762 40.909 0.00 0.00 0.00 1.82
198 199 3.452627 AGGTGGTGGTTTTGTGCAATTTA 59.547 39.130 0.00 0.00 0.00 1.40
199 200 3.558006 GGTGGTGGTTTTGTGCAATTTAC 59.442 43.478 0.00 0.00 0.00 2.01
200 201 3.558006 GTGGTGGTTTTGTGCAATTTACC 59.442 43.478 0.00 0.00 0.00 2.85
201 202 3.135225 GGTGGTTTTGTGCAATTTACCC 58.865 45.455 0.00 0.00 0.00 3.69
202 203 3.181459 GGTGGTTTTGTGCAATTTACCCT 60.181 43.478 0.00 0.00 0.00 4.34
203 204 4.447290 GTGGTTTTGTGCAATTTACCCTT 58.553 39.130 0.00 0.00 0.00 3.95
204 205 4.509970 GTGGTTTTGTGCAATTTACCCTTC 59.490 41.667 0.00 0.00 0.00 3.46
205 206 4.407296 TGGTTTTGTGCAATTTACCCTTCT 59.593 37.500 0.00 0.00 0.00 2.85
206 207 4.749598 GGTTTTGTGCAATTTACCCTTCTG 59.250 41.667 0.00 0.00 0.00 3.02
207 208 5.452636 GGTTTTGTGCAATTTACCCTTCTGA 60.453 40.000 0.00 0.00 0.00 3.27
208 209 5.452078 TTTGTGCAATTTACCCTTCTGAG 57.548 39.130 0.00 0.00 0.00 3.35
209 210 3.420893 TGTGCAATTTACCCTTCTGAGG 58.579 45.455 0.00 0.00 43.15 3.86
210 211 3.181434 TGTGCAATTTACCCTTCTGAGGT 60.181 43.478 0.00 0.00 41.85 3.85
211 212 3.440522 GTGCAATTTACCCTTCTGAGGTC 59.559 47.826 0.00 0.00 41.85 3.85
212 213 3.330701 TGCAATTTACCCTTCTGAGGTCT 59.669 43.478 0.00 0.00 41.85 3.85
220 221 1.634702 CTTCTGAGGTCTAGCGTTGC 58.365 55.000 0.00 0.00 0.00 4.17
226 227 0.393077 AGGTCTAGCGTTGCAGTTGT 59.607 50.000 0.00 0.00 0.00 3.32
234 235 2.226437 AGCGTTGCAGTTGTCCTTAATG 59.774 45.455 0.00 0.00 0.00 1.90
356 368 1.077357 TGGGCACTGGAAACACGTT 60.077 52.632 0.00 0.00 35.60 3.99
389 401 2.486548 GGCGCAGTAAATATCCCTGGAA 60.487 50.000 10.83 0.00 0.00 3.53
435 462 2.041922 TCTGGATCGTGGGAGGGG 60.042 66.667 0.00 0.00 0.00 4.79
436 463 2.365635 CTGGATCGTGGGAGGGGT 60.366 66.667 0.00 0.00 0.00 4.95
493 523 2.125673 GAAGTAGGCAAGGCGCGA 60.126 61.111 12.10 0.00 43.84 5.87
566 602 0.249280 GAAAAACCAAGTGCCACCCG 60.249 55.000 0.00 0.00 0.00 5.28
568 604 2.575455 AAAACCAAGTGCCACCCGGA 62.575 55.000 0.73 0.00 0.00 5.14
569 605 2.976494 AAACCAAGTGCCACCCGGAG 62.976 60.000 0.73 0.00 0.00 4.63
570 606 3.636231 CCAAGTGCCACCCGGAGA 61.636 66.667 0.73 0.00 0.00 3.71
571 607 2.429930 CAAGTGCCACCCGGAGAA 59.570 61.111 0.73 0.00 0.00 2.87
572 608 1.672356 CAAGTGCCACCCGGAGAAG 60.672 63.158 0.73 0.00 0.00 2.85
573 609 2.895424 AAGTGCCACCCGGAGAAGG 61.895 63.158 0.73 0.00 0.00 3.46
574 610 3.319198 GTGCCACCCGGAGAAGGA 61.319 66.667 0.73 0.00 0.00 3.36
575 611 3.003173 TGCCACCCGGAGAAGGAG 61.003 66.667 0.73 0.00 0.00 3.69
576 612 4.475135 GCCACCCGGAGAAGGAGC 62.475 72.222 0.73 0.00 0.00 4.70
577 613 3.787001 CCACCCGGAGAAGGAGCC 61.787 72.222 0.73 0.00 0.00 4.70
615 651 2.884207 GGCCCGATCGAACGACAC 60.884 66.667 18.66 5.13 35.09 3.67
644 680 2.027073 GCGGACAACGTGCAGATCA 61.027 57.895 0.00 0.00 46.52 2.92
651 687 2.094258 ACAACGTGCAGATCATTAAGCG 59.906 45.455 0.00 0.00 0.00 4.68
654 690 2.127251 CGTGCAGATCATTAAGCGCTA 58.873 47.619 12.05 0.00 35.49 4.26
835 883 0.182775 ATGCCCATAACCGTCCTTCC 59.817 55.000 0.00 0.00 0.00 3.46
836 884 1.202099 TGCCCATAACCGTCCTTCCA 61.202 55.000 0.00 0.00 0.00 3.53
837 885 0.746923 GCCCATAACCGTCCTTCCAC 60.747 60.000 0.00 0.00 0.00 4.02
972 1034 4.375105 GCACGTACGATAGATAAAAGCAGC 60.375 45.833 24.41 1.76 41.38 5.25
1302 1371 2.661537 CTCCGCAACGTGCTCACA 60.662 61.111 8.07 0.00 42.25 3.58
1323 1392 3.982241 AACCCCGTCACCGTCGAC 61.982 66.667 5.18 5.18 0.00 4.20
1410 1479 4.530857 CTCGGCCGCGGGATCTTT 62.531 66.667 29.38 0.00 0.00 2.52
1719 1803 3.440415 ACGGCGTCGATGCTCTCA 61.440 61.111 27.56 0.00 40.11 3.27
1947 2052 0.608308 TCAGGGACATCGTCGTCAGT 60.608 55.000 8.77 0.00 37.66 3.41
1951 2056 0.982673 GGACATCGTCGTCAGTTTCG 59.017 55.000 8.77 0.00 37.66 3.46
2599 2725 5.413213 CCAACCTGATACGGAATAAACAACA 59.587 40.000 0.00 0.00 0.00 3.33
2629 2755 1.341802 GACGATCGCGCTCTTGTTG 59.658 57.895 16.60 0.00 42.48 3.33
2632 2758 3.100862 GATCGCGCTCTTGTTGGCC 62.101 63.158 5.56 0.00 0.00 5.36
2649 2777 0.179081 GCCTATTCTCGCCCGTTTCT 60.179 55.000 0.00 0.00 0.00 2.52
2656 2784 0.796927 CTCGCCCGTTTCTTCCTTTC 59.203 55.000 0.00 0.00 0.00 2.62
2881 3013 3.809832 AGCAAATTATTGAGATCGGGTCG 59.190 43.478 0.00 0.00 38.94 4.79
2883 3015 4.377021 CAAATTATTGAGATCGGGTCGGA 58.623 43.478 0.00 0.00 38.94 4.55
2884 3016 3.944055 ATTATTGAGATCGGGTCGGAG 57.056 47.619 0.00 0.00 0.00 4.63
2937 3075 6.520792 CGGAAAGACTATATAAACCGTTGG 57.479 41.667 0.00 0.00 35.40 3.77
2948 3087 1.078115 AACCGTTGGGGGAAATACCT 58.922 50.000 0.00 0.00 41.60 3.08
2960 3099 2.158740 GGAAATACCTCCTTGGCTCTCC 60.159 54.545 0.00 0.00 40.22 3.71
2963 3102 1.870941 TACCTCCTTGGCTCTCCGGA 61.871 60.000 2.93 2.93 40.22 5.14
3051 3199 7.114811 CGGAAATAAATTTGACCTTCTGTTGTG 59.885 37.037 0.00 0.00 0.00 3.33
3058 3206 1.527311 GACCTTCTGTTGTGCTCGAAC 59.473 52.381 0.00 0.00 0.00 3.95
3065 3213 2.525055 TGTTGTGCTCGAACAAAAAGC 58.475 42.857 4.30 0.00 41.52 3.51
3123 3272 2.786777 ACCCGACCAAATTAGGACAAC 58.213 47.619 0.00 0.00 0.00 3.32
3124 3273 2.374170 ACCCGACCAAATTAGGACAACT 59.626 45.455 0.00 0.00 0.00 3.16
3125 3274 3.583966 ACCCGACCAAATTAGGACAACTA 59.416 43.478 0.00 0.00 0.00 2.24
3126 3275 4.189231 CCCGACCAAATTAGGACAACTAG 58.811 47.826 0.00 0.00 32.16 2.57
3127 3276 4.323257 CCCGACCAAATTAGGACAACTAGT 60.323 45.833 0.00 0.00 32.16 2.57
3128 3277 5.105228 CCCGACCAAATTAGGACAACTAGTA 60.105 44.000 0.00 0.00 32.16 1.82
3129 3278 6.400568 CCGACCAAATTAGGACAACTAGTAA 58.599 40.000 0.00 0.00 32.16 2.24
3130 3279 6.534079 CCGACCAAATTAGGACAACTAGTAAG 59.466 42.308 0.00 0.00 32.16 2.34
3131 3280 6.534079 CGACCAAATTAGGACAACTAGTAAGG 59.466 42.308 0.00 0.00 32.16 2.69
3132 3281 7.325725 ACCAAATTAGGACAACTAGTAAGGT 57.674 36.000 0.00 0.00 32.16 3.50
3133 3282 8.439964 ACCAAATTAGGACAACTAGTAAGGTA 57.560 34.615 0.00 0.00 31.40 3.08
3134 3283 8.316946 ACCAAATTAGGACAACTAGTAAGGTAC 58.683 37.037 0.00 0.00 31.40 3.34
3135 3284 8.316214 CCAAATTAGGACAACTAGTAAGGTACA 58.684 37.037 0.00 0.00 32.16 2.90
3136 3285 9.886132 CAAATTAGGACAACTAGTAAGGTACAT 57.114 33.333 0.00 0.00 32.16 2.29
3137 3286 9.886132 AAATTAGGACAACTAGTAAGGTACATG 57.114 33.333 0.00 0.00 32.16 3.21
3138 3287 8.605325 ATTAGGACAACTAGTAAGGTACATGT 57.395 34.615 2.69 2.69 32.16 3.21
3139 3288 6.282199 AGGACAACTAGTAAGGTACATGTG 57.718 41.667 9.11 0.00 0.00 3.21
3140 3289 4.868734 GGACAACTAGTAAGGTACATGTGC 59.131 45.833 9.11 7.07 0.00 4.57
3141 3290 5.475719 GACAACTAGTAAGGTACATGTGCA 58.524 41.667 16.11 0.00 0.00 4.57
3142 3291 6.049955 ACAACTAGTAAGGTACATGTGCAT 57.950 37.500 16.11 5.67 0.00 3.96
3143 3292 6.472887 ACAACTAGTAAGGTACATGTGCATT 58.527 36.000 17.60 17.60 0.00 3.56
3144 3293 6.371548 ACAACTAGTAAGGTACATGTGCATTG 59.628 38.462 21.63 9.02 0.00 2.82
3145 3294 4.876107 ACTAGTAAGGTACATGTGCATTGC 59.124 41.667 21.63 20.04 0.00 3.56
3146 3295 3.684908 AGTAAGGTACATGTGCATTGCA 58.315 40.909 25.26 7.38 35.60 4.08
3158 3307 3.507103 TGCATTGCACGCATAAGATTT 57.493 38.095 7.38 0.00 33.55 2.17
3159 3308 3.180613 TGCATTGCACGCATAAGATTTG 58.819 40.909 7.38 0.00 33.55 2.32
3160 3309 2.536803 GCATTGCACGCATAAGATTTGG 59.463 45.455 3.15 0.00 0.00 3.28
3161 3310 2.276472 TTGCACGCATAAGATTTGGC 57.724 45.000 0.00 0.00 0.00 4.52
3162 3311 1.172175 TGCACGCATAAGATTTGGCA 58.828 45.000 0.00 0.00 0.00 4.92
3163 3312 1.543358 TGCACGCATAAGATTTGGCAA 59.457 42.857 0.00 0.00 0.00 4.52
3164 3313 1.919918 GCACGCATAAGATTTGGCAAC 59.080 47.619 0.00 0.00 0.00 4.17
3165 3314 2.529151 CACGCATAAGATTTGGCAACC 58.471 47.619 0.00 0.00 0.00 3.77
3166 3315 2.094803 CACGCATAAGATTTGGCAACCA 60.095 45.455 0.00 0.00 0.00 3.67
3167 3316 2.560542 ACGCATAAGATTTGGCAACCAA 59.439 40.909 0.00 0.00 42.29 3.67
3181 3330 8.908786 TTTGGCAACCAAATTATGAATAAACA 57.091 26.923 7.69 0.00 46.92 2.83
3182 3331 7.897575 TGGCAACCAAATTATGAATAAACAC 57.102 32.000 0.00 0.00 0.00 3.32
3183 3332 6.876257 TGGCAACCAAATTATGAATAAACACC 59.124 34.615 0.00 0.00 0.00 4.16
3184 3333 6.876257 GGCAACCAAATTATGAATAAACACCA 59.124 34.615 0.00 0.00 0.00 4.17
3185 3334 7.148490 GGCAACCAAATTATGAATAAACACCAC 60.148 37.037 0.00 0.00 0.00 4.16
3186 3335 7.386299 GCAACCAAATTATGAATAAACACCACA 59.614 33.333 0.00 0.00 0.00 4.17
3187 3336 8.707839 CAACCAAATTATGAATAAACACCACAC 58.292 33.333 0.00 0.00 0.00 3.82
3188 3337 8.189119 ACCAAATTATGAATAAACACCACACT 57.811 30.769 0.00 0.00 0.00 3.55
3189 3338 9.303116 ACCAAATTATGAATAAACACCACACTA 57.697 29.630 0.00 0.00 0.00 2.74
3194 3343 9.845740 ATTATGAATAAACACCACACTATAGCA 57.154 29.630 0.00 0.00 0.00 3.49
3195 3344 9.845740 TTATGAATAAACACCACACTATAGCAT 57.154 29.630 0.00 0.00 0.00 3.79
3196 3345 7.552458 TGAATAAACACCACACTATAGCATG 57.448 36.000 0.00 0.00 0.00 4.06
3197 3346 7.109501 TGAATAAACACCACACTATAGCATGT 58.890 34.615 0.00 0.00 0.00 3.21
3198 3347 8.261522 TGAATAAACACCACACTATAGCATGTA 58.738 33.333 0.00 0.00 0.00 2.29
3199 3348 9.104965 GAATAAACACCACACTATAGCATGTAA 57.895 33.333 0.00 0.00 0.00 2.41
3200 3349 6.985188 AAACACCACACTATAGCATGTAAG 57.015 37.500 0.00 0.00 0.00 2.34
3201 3350 5.677319 ACACCACACTATAGCATGTAAGT 57.323 39.130 0.00 0.00 0.00 2.24
3202 3351 6.049955 ACACCACACTATAGCATGTAAGTT 57.950 37.500 0.00 0.00 0.00 2.66
3203 3352 6.472887 ACACCACACTATAGCATGTAAGTTT 58.527 36.000 0.00 0.00 0.00 2.66
3204 3353 6.940298 ACACCACACTATAGCATGTAAGTTTT 59.060 34.615 0.00 0.00 0.00 2.43
3205 3354 7.094805 ACACCACACTATAGCATGTAAGTTTTG 60.095 37.037 0.00 0.00 0.00 2.44
3206 3355 7.119116 CACCACACTATAGCATGTAAGTTTTGA 59.881 37.037 0.00 0.00 0.00 2.69
3207 3356 7.334421 ACCACACTATAGCATGTAAGTTTTGAG 59.666 37.037 0.00 0.00 0.00 3.02
3208 3357 7.334421 CCACACTATAGCATGTAAGTTTTGAGT 59.666 37.037 0.00 0.00 0.00 3.41
3209 3358 8.383619 CACACTATAGCATGTAAGTTTTGAGTC 58.616 37.037 0.00 0.00 0.00 3.36
3210 3359 8.094548 ACACTATAGCATGTAAGTTTTGAGTCA 58.905 33.333 0.00 0.00 0.00 3.41
3211 3360 9.102757 CACTATAGCATGTAAGTTTTGAGTCAT 57.897 33.333 0.00 0.00 0.00 3.06
3217 3366 8.562892 AGCATGTAAGTTTTGAGTCATATATGC 58.437 33.333 17.80 17.80 37.82 3.14
3218 3367 8.344831 GCATGTAAGTTTTGAGTCATATATGCA 58.655 33.333 19.40 0.00 37.62 3.96
3221 3370 9.612066 TGTAAGTTTTGAGTCATATATGCATGA 57.388 29.630 10.16 0.00 32.50 3.07
3224 3373 8.687292 AGTTTTGAGTCATATATGCATGATGT 57.313 30.769 10.16 0.00 37.28 3.06
3225 3374 9.783081 AGTTTTGAGTCATATATGCATGATGTA 57.217 29.630 10.16 0.00 37.28 2.29
3229 3378 9.595823 TTGAGTCATATATGCATGATGTAGATG 57.404 33.333 10.16 1.90 37.28 2.90
3230 3379 8.755977 TGAGTCATATATGCATGATGTAGATGT 58.244 33.333 10.16 0.00 37.28 3.06
3231 3380 9.597170 GAGTCATATATGCATGATGTAGATGTT 57.403 33.333 10.16 0.00 37.28 2.71
3232 3381 9.597170 AGTCATATATGCATGATGTAGATGTTC 57.403 33.333 10.16 1.19 37.28 3.18
3233 3382 8.538039 GTCATATATGCATGATGTAGATGTTCG 58.462 37.037 10.16 0.00 37.28 3.95
3234 3383 8.253113 TCATATATGCATGATGTAGATGTTCGT 58.747 33.333 10.16 0.00 29.93 3.85
3235 3384 8.876790 CATATATGCATGATGTAGATGTTCGTT 58.123 33.333 10.16 0.00 0.00 3.85
3236 3385 7.734924 ATATGCATGATGTAGATGTTCGTTT 57.265 32.000 10.16 0.00 0.00 3.60
3237 3386 8.831715 ATATGCATGATGTAGATGTTCGTTTA 57.168 30.769 10.16 0.00 0.00 2.01
3238 3387 6.976636 TGCATGATGTAGATGTTCGTTTAA 57.023 33.333 0.00 0.00 0.00 1.52
3239 3388 7.552458 TGCATGATGTAGATGTTCGTTTAAT 57.448 32.000 0.00 0.00 0.00 1.40
3240 3389 7.984391 TGCATGATGTAGATGTTCGTTTAATT 58.016 30.769 0.00 0.00 0.00 1.40
3241 3390 8.122330 TGCATGATGTAGATGTTCGTTTAATTC 58.878 33.333 0.00 0.00 0.00 2.17
3242 3391 8.338259 GCATGATGTAGATGTTCGTTTAATTCT 58.662 33.333 0.00 0.00 0.00 2.40
3248 3397 9.661563 TGTAGATGTTCGTTTAATTCTTATGGT 57.338 29.630 0.00 0.00 0.00 3.55
3251 3400 9.226606 AGATGTTCGTTTAATTCTTATGGTTCA 57.773 29.630 0.00 0.00 0.00 3.18
3254 3403 8.455682 TGTTCGTTTAATTCTTATGGTTCATCC 58.544 33.333 0.00 0.00 0.00 3.51
3255 3404 7.562454 TCGTTTAATTCTTATGGTTCATCCC 57.438 36.000 0.00 0.00 34.77 3.85
3256 3405 7.113437 TCGTTTAATTCTTATGGTTCATCCCA 58.887 34.615 0.00 0.00 39.27 4.37
3257 3406 7.777910 TCGTTTAATTCTTATGGTTCATCCCAT 59.222 33.333 0.00 0.00 46.86 4.00
3258 3407 8.413229 CGTTTAATTCTTATGGTTCATCCCATT 58.587 33.333 0.00 0.00 42.70 3.16
3259 3408 9.750125 GTTTAATTCTTATGGTTCATCCCATTC 57.250 33.333 0.00 0.00 42.70 2.67
3260 3409 9.486123 TTTAATTCTTATGGTTCATCCCATTCA 57.514 29.630 0.00 0.00 42.70 2.57
3261 3410 7.976414 AATTCTTATGGTTCATCCCATTCAA 57.024 32.000 0.00 0.00 42.70 2.69
3262 3411 7.976414 ATTCTTATGGTTCATCCCATTCAAA 57.024 32.000 0.00 0.00 42.70 2.69
3263 3412 7.789202 TTCTTATGGTTCATCCCATTCAAAA 57.211 32.000 0.00 0.00 42.70 2.44
3264 3413 7.169158 TCTTATGGTTCATCCCATTCAAAAC 57.831 36.000 0.00 0.00 42.70 2.43
3265 3414 4.824479 ATGGTTCATCCCATTCAAAACC 57.176 40.909 0.00 0.00 42.70 3.27
3266 3415 3.581101 TGGTTCATCCCATTCAAAACCA 58.419 40.909 0.83 0.83 42.74 3.67
3267 3416 3.969976 TGGTTCATCCCATTCAAAACCAA 59.030 39.130 2.45 0.00 42.20 3.67
3268 3417 4.596643 TGGTTCATCCCATTCAAAACCAAT 59.403 37.500 2.45 0.00 42.20 3.16
3269 3418 5.072872 TGGTTCATCCCATTCAAAACCAATT 59.927 36.000 2.45 0.00 42.20 2.32
3270 3419 6.270927 TGGTTCATCCCATTCAAAACCAATTA 59.729 34.615 2.45 0.00 42.20 1.40
3271 3420 6.818142 GGTTCATCCCATTCAAAACCAATTAG 59.182 38.462 0.00 0.00 36.89 1.73
3272 3421 7.386059 GTTCATCCCATTCAAAACCAATTAGT 58.614 34.615 0.00 0.00 0.00 2.24
3273 3422 7.552050 TCATCCCATTCAAAACCAATTAGTT 57.448 32.000 0.00 0.00 0.00 2.24
3274 3423 7.972301 TCATCCCATTCAAAACCAATTAGTTT 58.028 30.769 0.00 0.00 41.67 2.66
3276 3425 9.065798 CATCCCATTCAAAACCAATTAGTTTTT 57.934 29.630 11.37 0.00 45.34 1.94
3337 3486 9.534565 TGCATTGTAAAGCATAAAGTAAAAACA 57.465 25.926 0.00 0.00 35.51 2.83
3347 3496 9.717942 AGCATAAAGTAAAAACAAATAATGGCA 57.282 25.926 0.00 0.00 0.00 4.92
3407 3556 8.845413 AAGATTATAGATCAATGGAGAAGTGC 57.155 34.615 0.00 0.00 0.00 4.40
3408 3557 8.204903 AGATTATAGATCAATGGAGAAGTGCT 57.795 34.615 0.00 0.00 0.00 4.40
3409 3558 8.658619 AGATTATAGATCAATGGAGAAGTGCTT 58.341 33.333 0.00 0.00 0.00 3.91
3410 3559 8.618702 ATTATAGATCAATGGAGAAGTGCTTG 57.381 34.615 0.00 0.00 0.00 4.01
3411 3560 4.298103 AGATCAATGGAGAAGTGCTTGT 57.702 40.909 0.00 0.00 0.00 3.16
3412 3561 4.660168 AGATCAATGGAGAAGTGCTTGTT 58.340 39.130 0.00 0.00 0.00 2.83
3413 3562 5.075493 AGATCAATGGAGAAGTGCTTGTTT 58.925 37.500 0.00 0.00 0.00 2.83
3414 3563 5.537674 AGATCAATGGAGAAGTGCTTGTTTT 59.462 36.000 0.00 0.00 0.00 2.43
3415 3564 5.596836 TCAATGGAGAAGTGCTTGTTTTT 57.403 34.783 0.00 0.00 0.00 1.94
3438 3587 8.755696 TTTTAGGTTTGTGCATTATGCTTAAG 57.244 30.769 18.44 0.00 45.31 1.85
3439 3588 5.982890 AGGTTTGTGCATTATGCTTAAGT 57.017 34.783 18.44 0.70 45.31 2.24
3440 3589 6.345096 AGGTTTGTGCATTATGCTTAAGTT 57.655 33.333 18.44 0.00 45.31 2.66
3441 3590 6.389906 AGGTTTGTGCATTATGCTTAAGTTC 58.610 36.000 18.44 3.31 45.31 3.01
3442 3591 6.015519 AGGTTTGTGCATTATGCTTAAGTTCA 60.016 34.615 18.44 3.91 45.31 3.18
3443 3592 6.644592 GGTTTGTGCATTATGCTTAAGTTCAA 59.355 34.615 18.44 8.92 45.31 2.69
3444 3593 7.359181 GGTTTGTGCATTATGCTTAAGTTCAAC 60.359 37.037 18.44 5.27 45.31 3.18
3445 3594 5.708948 TGTGCATTATGCTTAAGTTCAACC 58.291 37.500 18.44 0.00 45.31 3.77
3446 3595 5.242615 TGTGCATTATGCTTAAGTTCAACCA 59.757 36.000 18.44 0.00 45.31 3.67
3447 3596 6.071447 TGTGCATTATGCTTAAGTTCAACCAT 60.071 34.615 18.44 0.63 45.31 3.55
3448 3597 6.254157 GTGCATTATGCTTAAGTTCAACCATG 59.746 38.462 18.44 0.00 45.31 3.66
3449 3598 5.750067 GCATTATGCTTAAGTTCAACCATGG 59.250 40.000 11.19 11.19 40.96 3.66
3450 3599 6.405731 GCATTATGCTTAAGTTCAACCATGGA 60.406 38.462 21.47 0.00 40.96 3.41
3451 3600 6.757897 TTATGCTTAAGTTCAACCATGGAG 57.242 37.500 21.47 10.83 0.00 3.86
3452 3601 4.098914 TGCTTAAGTTCAACCATGGAGT 57.901 40.909 21.47 2.21 0.00 3.85
3453 3602 5.235850 TGCTTAAGTTCAACCATGGAGTA 57.764 39.130 21.47 1.10 0.00 2.59
3454 3603 5.815581 TGCTTAAGTTCAACCATGGAGTAT 58.184 37.500 21.47 0.00 0.00 2.12
3455 3604 6.245408 TGCTTAAGTTCAACCATGGAGTATT 58.755 36.000 21.47 7.74 0.00 1.89
3456 3605 6.374333 TGCTTAAGTTCAACCATGGAGTATTC 59.626 38.462 21.47 4.19 0.00 1.75
3457 3606 6.599638 GCTTAAGTTCAACCATGGAGTATTCT 59.400 38.462 21.47 6.52 0.00 2.40
3458 3607 7.769044 GCTTAAGTTCAACCATGGAGTATTCTA 59.231 37.037 21.47 0.00 0.00 2.10
3459 3608 9.319143 CTTAAGTTCAACCATGGAGTATTCTAG 57.681 37.037 21.47 2.14 0.00 2.43
3460 3609 7.496346 AAGTTCAACCATGGAGTATTCTAGA 57.504 36.000 21.47 0.00 0.00 2.43
3461 3610 7.682787 AGTTCAACCATGGAGTATTCTAGAT 57.317 36.000 21.47 0.00 0.00 1.98
3462 3611 8.095452 AGTTCAACCATGGAGTATTCTAGATT 57.905 34.615 21.47 0.00 0.00 2.40
3463 3612 7.989741 AGTTCAACCATGGAGTATTCTAGATTG 59.010 37.037 21.47 7.85 0.00 2.67
3464 3613 7.437713 TCAACCATGGAGTATTCTAGATTGT 57.562 36.000 21.47 0.00 0.00 2.71
3465 3614 8.547481 TCAACCATGGAGTATTCTAGATTGTA 57.453 34.615 21.47 0.00 0.00 2.41
3466 3615 8.421784 TCAACCATGGAGTATTCTAGATTGTAC 58.578 37.037 21.47 0.00 0.00 2.90
3467 3616 7.914427 ACCATGGAGTATTCTAGATTGTACA 57.086 36.000 21.47 0.00 0.00 2.90
3468 3617 8.497910 ACCATGGAGTATTCTAGATTGTACAT 57.502 34.615 21.47 0.00 0.00 2.29
3469 3618 8.370940 ACCATGGAGTATTCTAGATTGTACATG 58.629 37.037 21.47 12.75 0.00 3.21
3470 3619 8.370940 CCATGGAGTATTCTAGATTGTACATGT 58.629 37.037 5.56 2.69 31.51 3.21
3471 3620 9.201127 CATGGAGTATTCTAGATTGTACATGTG 57.799 37.037 9.11 0.00 0.00 3.21
3472 3621 7.726216 TGGAGTATTCTAGATTGTACATGTGG 58.274 38.462 9.11 0.00 0.00 4.17
3473 3622 7.344612 TGGAGTATTCTAGATTGTACATGTGGT 59.655 37.037 9.11 0.00 0.00 4.16
3474 3623 8.857098 GGAGTATTCTAGATTGTACATGTGGTA 58.143 37.037 9.11 0.00 0.00 3.25
3475 3624 9.900710 GAGTATTCTAGATTGTACATGTGGTAG 57.099 37.037 9.11 0.70 31.13 3.18
3476 3625 9.642343 AGTATTCTAGATTGTACATGTGGTAGA 57.358 33.333 9.11 3.02 31.13 2.59
3483 3632 5.755409 TTGTACATGTGGTAGAATCTGGT 57.245 39.130 9.11 0.00 30.94 4.00
3484 3633 5.084818 TGTACATGTGGTAGAATCTGGTG 57.915 43.478 9.11 0.00 31.13 4.17
3485 3634 3.634397 ACATGTGGTAGAATCTGGTGG 57.366 47.619 0.00 0.00 0.00 4.61
3486 3635 3.181329 ACATGTGGTAGAATCTGGTGGA 58.819 45.455 0.00 0.00 0.00 4.02
3487 3636 3.587061 ACATGTGGTAGAATCTGGTGGAA 59.413 43.478 0.00 0.00 0.00 3.53
3488 3637 4.228210 ACATGTGGTAGAATCTGGTGGAAT 59.772 41.667 0.00 0.00 0.00 3.01
3489 3638 4.220693 TGTGGTAGAATCTGGTGGAATG 57.779 45.455 0.00 0.00 0.00 2.67
3490 3639 3.587061 TGTGGTAGAATCTGGTGGAATGT 59.413 43.478 0.00 0.00 0.00 2.71
3491 3640 4.780554 TGTGGTAGAATCTGGTGGAATGTA 59.219 41.667 0.00 0.00 0.00 2.29
3492 3641 5.104941 TGTGGTAGAATCTGGTGGAATGTAG 60.105 44.000 0.00 0.00 0.00 2.74
3493 3642 5.128827 GTGGTAGAATCTGGTGGAATGTAGA 59.871 44.000 0.00 0.00 0.00 2.59
3494 3643 5.905331 TGGTAGAATCTGGTGGAATGTAGAT 59.095 40.000 0.00 0.00 0.00 1.98
3495 3644 6.183361 TGGTAGAATCTGGTGGAATGTAGATG 60.183 42.308 0.00 0.00 30.77 2.90
3496 3645 6.042093 GGTAGAATCTGGTGGAATGTAGATGA 59.958 42.308 0.00 0.00 30.77 2.92
3497 3646 6.760440 AGAATCTGGTGGAATGTAGATGAT 57.240 37.500 0.00 0.00 30.77 2.45
3498 3647 7.862274 AGAATCTGGTGGAATGTAGATGATA 57.138 36.000 0.00 0.00 30.77 2.15
3499 3648 8.446714 AGAATCTGGTGGAATGTAGATGATAT 57.553 34.615 0.00 0.00 30.77 1.63
3500 3649 8.538701 AGAATCTGGTGGAATGTAGATGATATC 58.461 37.037 0.00 0.00 30.77 1.63
3501 3650 6.611613 TCTGGTGGAATGTAGATGATATCC 57.388 41.667 0.00 0.00 0.00 2.59
3502 3651 6.084060 TCTGGTGGAATGTAGATGATATCCA 58.916 40.000 0.00 0.00 0.00 3.41
3503 3652 6.558394 TCTGGTGGAATGTAGATGATATCCAA 59.442 38.462 0.00 0.00 0.00 3.53
3504 3653 6.533730 TGGTGGAATGTAGATGATATCCAAC 58.466 40.000 0.00 0.77 34.55 3.77
3505 3654 5.639506 GGTGGAATGTAGATGATATCCAACG 59.360 44.000 0.00 0.00 0.00 4.10
3506 3655 5.639506 GTGGAATGTAGATGATATCCAACGG 59.360 44.000 0.00 0.00 0.00 4.44
3507 3656 4.631813 GGAATGTAGATGATATCCAACGGC 59.368 45.833 0.00 0.00 0.00 5.68
3508 3657 3.678056 TGTAGATGATATCCAACGGCC 57.322 47.619 0.00 0.00 0.00 6.13
3509 3658 2.029380 TGTAGATGATATCCAACGGCCG 60.029 50.000 26.86 26.86 0.00 6.13
3510 3659 0.321671 AGATGATATCCAACGGCCGG 59.678 55.000 31.76 12.82 0.00 6.13
3511 3660 0.034896 GATGATATCCAACGGCCGGT 59.965 55.000 31.76 23.68 0.00 5.28
3512 3661 1.274167 GATGATATCCAACGGCCGGTA 59.726 52.381 31.76 9.73 0.00 4.02
3513 3662 0.677288 TGATATCCAACGGCCGGTAG 59.323 55.000 31.76 18.14 0.00 3.18
3514 3663 0.677842 GATATCCAACGGCCGGTAGT 59.322 55.000 31.76 14.78 0.00 2.73
3515 3664 1.069668 GATATCCAACGGCCGGTAGTT 59.930 52.381 31.76 14.35 0.00 2.24
3516 3665 0.461135 TATCCAACGGCCGGTAGTTC 59.539 55.000 31.76 0.00 0.00 3.01
3517 3666 1.262640 ATCCAACGGCCGGTAGTTCT 61.263 55.000 31.76 2.42 0.00 3.01
3518 3667 1.447314 CCAACGGCCGGTAGTTCTC 60.447 63.158 31.76 0.00 0.00 2.87
3519 3668 1.804326 CAACGGCCGGTAGTTCTCG 60.804 63.158 31.76 4.77 0.00 4.04
3527 3676 1.287425 CGGTAGTTCTCGGATTTGCC 58.713 55.000 0.00 0.00 0.00 4.52
3528 3677 1.404986 CGGTAGTTCTCGGATTTGCCA 60.405 52.381 0.00 0.00 35.94 4.92
3529 3678 2.741878 CGGTAGTTCTCGGATTTGCCAT 60.742 50.000 0.00 0.00 35.94 4.40
3530 3679 2.872858 GGTAGTTCTCGGATTTGCCATC 59.127 50.000 0.00 0.00 35.94 3.51
3531 3680 3.432326 GGTAGTTCTCGGATTTGCCATCT 60.432 47.826 0.00 0.00 35.94 2.90
3532 3681 2.911484 AGTTCTCGGATTTGCCATCTC 58.089 47.619 0.00 0.00 35.94 2.75
3533 3682 2.503356 AGTTCTCGGATTTGCCATCTCT 59.497 45.455 0.00 0.00 35.94 3.10
3534 3683 2.609427 TCTCGGATTTGCCATCTCTG 57.391 50.000 0.00 0.00 35.94 3.35
3535 3684 0.942962 CTCGGATTTGCCATCTCTGC 59.057 55.000 0.00 0.00 35.94 4.26
3536 3685 0.252761 TCGGATTTGCCATCTCTGCA 59.747 50.000 0.00 0.00 35.94 4.41
3537 3686 0.379669 CGGATTTGCCATCTCTGCAC 59.620 55.000 0.00 0.00 38.72 4.57
3538 3687 0.743097 GGATTTGCCATCTCTGCACC 59.257 55.000 0.00 0.00 38.72 5.01
3539 3688 0.379669 GATTTGCCATCTCTGCACCG 59.620 55.000 0.00 0.00 38.72 4.94
3540 3689 0.322816 ATTTGCCATCTCTGCACCGT 60.323 50.000 0.00 0.00 38.72 4.83
3541 3690 0.955428 TTTGCCATCTCTGCACCGTC 60.955 55.000 0.00 0.00 38.72 4.79
3542 3691 2.110757 TTGCCATCTCTGCACCGTCA 62.111 55.000 0.00 0.00 38.72 4.35
3543 3692 1.375908 GCCATCTCTGCACCGTCAA 60.376 57.895 0.00 0.00 0.00 3.18
3544 3693 0.955428 GCCATCTCTGCACCGTCAAA 60.955 55.000 0.00 0.00 0.00 2.69
3545 3694 1.742761 CCATCTCTGCACCGTCAAAT 58.257 50.000 0.00 0.00 0.00 2.32
3546 3695 2.086869 CCATCTCTGCACCGTCAAATT 58.913 47.619 0.00 0.00 0.00 1.82
3547 3696 2.159476 CCATCTCTGCACCGTCAAATTG 60.159 50.000 0.00 0.00 0.00 2.32
3548 3697 1.522668 TCTCTGCACCGTCAAATTGG 58.477 50.000 0.00 0.00 0.00 3.16
3549 3698 0.109597 CTCTGCACCGTCAAATTGGC 60.110 55.000 0.00 0.00 0.00 4.52
3550 3699 0.537143 TCTGCACCGTCAAATTGGCT 60.537 50.000 0.00 0.00 0.00 4.75
3551 3700 0.314935 CTGCACCGTCAAATTGGCTT 59.685 50.000 0.00 0.00 0.00 4.35
3552 3701 0.313672 TGCACCGTCAAATTGGCTTC 59.686 50.000 0.00 0.00 0.00 3.86
3553 3702 0.313672 GCACCGTCAAATTGGCTTCA 59.686 50.000 0.00 0.00 0.00 3.02
3554 3703 1.067635 GCACCGTCAAATTGGCTTCAT 60.068 47.619 0.00 0.00 0.00 2.57
3555 3704 2.867429 CACCGTCAAATTGGCTTCATC 58.133 47.619 0.00 0.00 0.00 2.92
3556 3705 1.818674 ACCGTCAAATTGGCTTCATCC 59.181 47.619 0.00 0.00 0.00 3.51
3557 3706 1.818060 CCGTCAAATTGGCTTCATCCA 59.182 47.619 0.00 0.00 0.00 3.41
3563 3712 2.941210 TTGGCTTCATCCAACGACC 58.059 52.632 0.00 0.00 40.92 4.79
3564 3713 0.109532 TTGGCTTCATCCAACGACCA 59.890 50.000 0.00 0.00 40.92 4.02
3565 3714 0.327924 TGGCTTCATCCAACGACCAT 59.672 50.000 0.00 0.00 32.18 3.55
3566 3715 1.017387 GGCTTCATCCAACGACCATC 58.983 55.000 0.00 0.00 0.00 3.51
3567 3716 1.407437 GGCTTCATCCAACGACCATCT 60.407 52.381 0.00 0.00 0.00 2.90
3568 3717 2.359900 GCTTCATCCAACGACCATCTT 58.640 47.619 0.00 0.00 0.00 2.40
3569 3718 2.749621 GCTTCATCCAACGACCATCTTT 59.250 45.455 0.00 0.00 0.00 2.52
3570 3719 3.181506 GCTTCATCCAACGACCATCTTTC 60.182 47.826 0.00 0.00 0.00 2.62
3571 3720 3.694043 TCATCCAACGACCATCTTTCA 57.306 42.857 0.00 0.00 0.00 2.69
3572 3721 4.014569 TCATCCAACGACCATCTTTCAA 57.985 40.909 0.00 0.00 0.00 2.69
3573 3722 4.393834 TCATCCAACGACCATCTTTCAAA 58.606 39.130 0.00 0.00 0.00 2.69
3574 3723 4.455533 TCATCCAACGACCATCTTTCAAAG 59.544 41.667 0.00 0.00 0.00 2.77
3575 3724 3.815809 TCCAACGACCATCTTTCAAAGT 58.184 40.909 0.00 0.00 0.00 2.66
3576 3725 4.204012 TCCAACGACCATCTTTCAAAGTT 58.796 39.130 0.00 0.00 0.00 2.66
3577 3726 5.369833 TCCAACGACCATCTTTCAAAGTTA 58.630 37.500 0.00 0.00 0.00 2.24
3578 3727 6.001460 TCCAACGACCATCTTTCAAAGTTAT 58.999 36.000 0.00 0.00 0.00 1.89
3579 3728 6.148811 TCCAACGACCATCTTTCAAAGTTATC 59.851 38.462 0.00 0.00 0.00 1.75
3580 3729 6.314784 CAACGACCATCTTTCAAAGTTATCC 58.685 40.000 0.00 0.00 0.00 2.59
3581 3730 4.630069 ACGACCATCTTTCAAAGTTATCCG 59.370 41.667 0.00 0.49 0.00 4.18
3582 3731 4.494199 CGACCATCTTTCAAAGTTATCCGC 60.494 45.833 0.00 0.00 0.00 5.54
3583 3732 4.331968 ACCATCTTTCAAAGTTATCCGCA 58.668 39.130 0.00 0.00 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.201705 GGCACCACTTAACCTCTCAAATATAAC 60.202 40.741 0.00 0.00 0.00 1.89
1 2 6.826741 GGCACCACTTAACCTCTCAAATATAA 59.173 38.462 0.00 0.00 0.00 0.98
2 3 6.069905 TGGCACCACTTAACCTCTCAAATATA 60.070 38.462 0.00 0.00 0.00 0.86
3 4 5.193679 GGCACCACTTAACCTCTCAAATAT 58.806 41.667 0.00 0.00 0.00 1.28
4 5 4.042311 TGGCACCACTTAACCTCTCAAATA 59.958 41.667 0.00 0.00 0.00 1.40
5 6 3.181434 TGGCACCACTTAACCTCTCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
6 7 2.173782 TGGCACCACTTAACCTCTCAAA 59.826 45.455 0.00 0.00 0.00 2.69
7 8 1.771854 TGGCACCACTTAACCTCTCAA 59.228 47.619 0.00 0.00 0.00 3.02
8 9 1.429930 TGGCACCACTTAACCTCTCA 58.570 50.000 0.00 0.00 0.00 3.27
9 10 2.224548 ACTTGGCACCACTTAACCTCTC 60.225 50.000 0.00 0.00 0.00 3.20
10 11 1.774856 ACTTGGCACCACTTAACCTCT 59.225 47.619 0.00 0.00 0.00 3.69
11 12 1.880027 CACTTGGCACCACTTAACCTC 59.120 52.381 0.00 0.00 0.00 3.85
12 13 1.493022 TCACTTGGCACCACTTAACCT 59.507 47.619 0.00 0.00 0.00 3.50
13 14 1.880027 CTCACTTGGCACCACTTAACC 59.120 52.381 0.00 0.00 0.00 2.85
14 15 1.266989 GCTCACTTGGCACCACTTAAC 59.733 52.381 0.00 0.00 0.00 2.01
15 16 1.604604 GCTCACTTGGCACCACTTAA 58.395 50.000 0.00 0.00 0.00 1.85
16 17 0.250727 GGCTCACTTGGCACCACTTA 60.251 55.000 0.00 0.00 0.00 2.24
17 18 1.529244 GGCTCACTTGGCACCACTT 60.529 57.895 0.00 0.00 0.00 3.16
18 19 2.113986 GGCTCACTTGGCACCACT 59.886 61.111 0.00 0.00 0.00 4.00
19 20 2.113986 AGGCTCACTTGGCACCAC 59.886 61.111 0.00 0.00 34.73 4.16
20 21 2.113774 CAGGCTCACTTGGCACCA 59.886 61.111 0.00 0.00 34.73 4.17
21 22 1.968540 GTCAGGCTCACTTGGCACC 60.969 63.158 0.00 0.00 34.73 5.01
22 23 1.072159 AGTCAGGCTCACTTGGCAC 59.928 57.895 0.00 0.00 34.73 5.01
23 24 1.071987 CAGTCAGGCTCACTTGGCA 59.928 57.895 0.00 0.00 34.73 4.92
24 25 1.673665 CCAGTCAGGCTCACTTGGC 60.674 63.158 0.00 0.00 0.00 4.52
25 26 4.709840 CCAGTCAGGCTCACTTGG 57.290 61.111 0.00 0.00 0.00 3.61
42 43 2.337879 TTATGACAGATGGGGCCCGC 62.338 60.000 19.83 12.97 0.00 6.13
43 44 0.182537 TTTATGACAGATGGGGCCCG 59.817 55.000 19.83 5.76 0.00 6.13
44 45 2.242043 CATTTATGACAGATGGGGCCC 58.758 52.381 18.17 18.17 0.00 5.80
45 46 1.615392 GCATTTATGACAGATGGGGCC 59.385 52.381 0.00 0.00 0.00 5.80
46 47 2.035066 GTGCATTTATGACAGATGGGGC 59.965 50.000 0.00 0.00 0.00 5.80
47 48 3.559069 AGTGCATTTATGACAGATGGGG 58.441 45.455 0.00 0.00 0.00 4.96
48 49 6.460123 GGTTAAGTGCATTTATGACAGATGGG 60.460 42.308 2.17 0.00 0.00 4.00
49 50 6.498304 GGTTAAGTGCATTTATGACAGATGG 58.502 40.000 2.17 0.00 0.00 3.51
50 51 6.037062 TCGGTTAAGTGCATTTATGACAGATG 59.963 38.462 2.17 0.00 0.00 2.90
51 52 6.112734 TCGGTTAAGTGCATTTATGACAGAT 58.887 36.000 2.17 0.00 0.00 2.90
52 53 5.483811 TCGGTTAAGTGCATTTATGACAGA 58.516 37.500 2.17 3.04 0.00 3.41
53 54 5.351465 ACTCGGTTAAGTGCATTTATGACAG 59.649 40.000 2.17 0.78 0.00 3.51
54 55 5.242434 ACTCGGTTAAGTGCATTTATGACA 58.758 37.500 2.17 0.00 0.00 3.58
55 56 5.220605 GGACTCGGTTAAGTGCATTTATGAC 60.221 44.000 2.17 0.00 37.53 3.06
56 57 4.873827 GGACTCGGTTAAGTGCATTTATGA 59.126 41.667 2.17 1.59 37.53 2.15
57 58 4.260212 CGGACTCGGTTAAGTGCATTTATG 60.260 45.833 2.17 0.00 37.45 1.90
58 59 3.869246 CGGACTCGGTTAAGTGCATTTAT 59.131 43.478 2.17 0.00 37.45 1.40
59 60 3.056678 TCGGACTCGGTTAAGTGCATTTA 60.057 43.478 0.00 0.00 37.45 1.40
60 61 2.073816 CGGACTCGGTTAAGTGCATTT 58.926 47.619 0.00 0.00 37.45 2.32
61 62 1.274167 TCGGACTCGGTTAAGTGCATT 59.726 47.619 0.00 0.00 37.45 3.56
62 63 0.892755 TCGGACTCGGTTAAGTGCAT 59.107 50.000 0.00 0.00 37.45 3.96
63 64 0.892755 ATCGGACTCGGTTAAGTGCA 59.107 50.000 0.00 0.00 37.45 4.57
64 65 1.557651 GATCGGACTCGGTTAAGTGC 58.442 55.000 0.00 0.00 36.95 4.40
65 66 1.533338 CGGATCGGACTCGGTTAAGTG 60.533 57.143 0.00 0.00 36.95 3.16
66 67 0.737219 CGGATCGGACTCGGTTAAGT 59.263 55.000 0.00 0.00 36.95 2.24
67 68 0.594284 GCGGATCGGACTCGGTTAAG 60.594 60.000 4.16 0.00 36.95 1.85
68 69 1.434696 GCGGATCGGACTCGGTTAA 59.565 57.895 4.16 0.00 36.95 2.01
69 70 2.484062 GGCGGATCGGACTCGGTTA 61.484 63.158 4.16 0.00 36.95 2.85
70 71 3.834799 GGCGGATCGGACTCGGTT 61.835 66.667 4.16 0.00 36.95 4.44
73 74 3.596667 GATCGGCGGATCGGACTCG 62.597 68.421 17.29 4.86 39.72 4.18
74 75 2.255856 GATCGGCGGATCGGACTC 59.744 66.667 17.29 0.00 39.72 3.36
81 82 1.821216 AAAAACACTGATCGGCGGAT 58.179 45.000 7.21 6.45 34.96 4.18
82 83 3.315765 AAAAACACTGATCGGCGGA 57.684 47.368 7.21 0.00 0.00 5.54
155 156 8.862085 CCACCTTAAAGGATAGGTTTACAAAAA 58.138 33.333 0.00 0.00 42.01 1.94
156 157 8.005976 ACCACCTTAAAGGATAGGTTTACAAAA 58.994 33.333 0.00 0.00 42.01 2.44
157 158 7.449086 CACCACCTTAAAGGATAGGTTTACAAA 59.551 37.037 0.00 0.00 42.01 2.83
158 159 6.943718 CACCACCTTAAAGGATAGGTTTACAA 59.056 38.462 0.00 0.00 42.01 2.41
159 160 6.478129 CACCACCTTAAAGGATAGGTTTACA 58.522 40.000 0.00 0.00 42.01 2.41
160 161 5.884232 CCACCACCTTAAAGGATAGGTTTAC 59.116 44.000 0.00 0.00 42.01 2.01
161 162 5.552766 ACCACCACCTTAAAGGATAGGTTTA 59.447 40.000 0.00 0.00 42.01 2.01
162 163 4.355889 ACCACCACCTTAAAGGATAGGTTT 59.644 41.667 0.00 0.00 42.01 3.27
163 164 3.920841 ACCACCACCTTAAAGGATAGGTT 59.079 43.478 0.00 0.00 42.01 3.50
164 165 3.538387 ACCACCACCTTAAAGGATAGGT 58.462 45.455 0.00 0.00 45.54 3.08
165 166 4.586306 AACCACCACCTTAAAGGATAGG 57.414 45.455 0.00 0.00 37.67 2.57
166 167 5.773176 ACAAAACCACCACCTTAAAGGATAG 59.227 40.000 0.00 0.00 37.67 2.08
167 168 5.536916 CACAAAACCACCACCTTAAAGGATA 59.463 40.000 0.00 0.00 37.67 2.59
168 169 4.343814 CACAAAACCACCACCTTAAAGGAT 59.656 41.667 0.00 0.00 37.67 3.24
169 170 3.702045 CACAAAACCACCACCTTAAAGGA 59.298 43.478 0.00 0.00 37.67 3.36
170 171 3.739830 GCACAAAACCACCACCTTAAAGG 60.740 47.826 0.00 0.00 42.49 3.11
171 172 3.118956 TGCACAAAACCACCACCTTAAAG 60.119 43.478 0.00 0.00 0.00 1.85
172 173 2.832129 TGCACAAAACCACCACCTTAAA 59.168 40.909 0.00 0.00 0.00 1.52
173 174 2.457598 TGCACAAAACCACCACCTTAA 58.542 42.857 0.00 0.00 0.00 1.85
174 175 2.145397 TGCACAAAACCACCACCTTA 57.855 45.000 0.00 0.00 0.00 2.69
175 176 1.270907 TTGCACAAAACCACCACCTT 58.729 45.000 0.00 0.00 0.00 3.50
176 177 1.494960 ATTGCACAAAACCACCACCT 58.505 45.000 0.00 0.00 0.00 4.00
177 178 2.323968 AATTGCACAAAACCACCACC 57.676 45.000 0.00 0.00 0.00 4.61
178 179 3.558006 GGTAAATTGCACAAAACCACCAC 59.442 43.478 0.00 0.00 0.00 4.16
179 180 3.432326 GGGTAAATTGCACAAAACCACCA 60.432 43.478 12.28 0.00 0.00 4.17
180 181 3.135225 GGGTAAATTGCACAAAACCACC 58.865 45.455 12.28 6.71 0.00 4.61
181 182 4.066646 AGGGTAAATTGCACAAAACCAC 57.933 40.909 12.28 5.14 0.00 4.16
182 183 4.407296 AGAAGGGTAAATTGCACAAAACCA 59.593 37.500 12.28 0.00 0.00 3.67
183 184 4.749598 CAGAAGGGTAAATTGCACAAAACC 59.250 41.667 0.00 0.00 0.00 3.27
184 185 5.596845 TCAGAAGGGTAAATTGCACAAAAC 58.403 37.500 0.00 0.00 0.00 2.43
185 186 5.221422 CCTCAGAAGGGTAAATTGCACAAAA 60.221 40.000 0.00 0.00 39.21 2.44
186 187 4.280677 CCTCAGAAGGGTAAATTGCACAAA 59.719 41.667 0.00 0.00 39.21 2.83
187 188 3.826157 CCTCAGAAGGGTAAATTGCACAA 59.174 43.478 0.00 0.00 39.21 3.33
188 189 3.420893 CCTCAGAAGGGTAAATTGCACA 58.579 45.455 0.00 0.00 39.21 4.57
201 202 1.067565 TGCAACGCTAGACCTCAGAAG 60.068 52.381 0.00 0.00 0.00 2.85
202 203 0.966179 TGCAACGCTAGACCTCAGAA 59.034 50.000 0.00 0.00 0.00 3.02
203 204 0.528017 CTGCAACGCTAGACCTCAGA 59.472 55.000 0.00 0.00 0.00 3.27
204 205 0.244994 ACTGCAACGCTAGACCTCAG 59.755 55.000 0.00 0.00 0.00 3.35
205 206 0.679505 AACTGCAACGCTAGACCTCA 59.320 50.000 0.00 0.00 0.00 3.86
206 207 1.071605 CAACTGCAACGCTAGACCTC 58.928 55.000 0.00 0.00 0.00 3.85
207 208 0.393077 ACAACTGCAACGCTAGACCT 59.607 50.000 0.00 0.00 0.00 3.85
208 209 0.790814 GACAACTGCAACGCTAGACC 59.209 55.000 0.00 0.00 0.00 3.85
209 210 0.790814 GGACAACTGCAACGCTAGAC 59.209 55.000 0.00 0.00 0.00 2.59
210 211 0.679505 AGGACAACTGCAACGCTAGA 59.320 50.000 0.00 0.00 0.00 2.43
211 212 1.512926 AAGGACAACTGCAACGCTAG 58.487 50.000 0.00 0.00 0.00 3.42
212 213 2.823924 TAAGGACAACTGCAACGCTA 57.176 45.000 0.00 0.00 0.00 4.26
220 221 0.096976 CGGCGCATTAAGGACAACTG 59.903 55.000 10.83 0.00 0.00 3.16
246 247 1.143401 GGGACCGACCGATCTTTCC 59.857 63.158 0.00 0.00 40.11 3.13
389 401 2.109126 GTACCGGACTAGTCGCCGT 61.109 63.158 18.61 14.90 45.85 5.68
493 523 3.675228 CGGTCGTACATAACAGGAAAGCT 60.675 47.826 0.00 0.00 0.00 3.74
537 567 0.033405 TTGGTTTTTCACCCCGGTCA 60.033 50.000 0.00 0.00 46.68 4.02
547 583 0.249280 CGGGTGGCACTTGGTTTTTC 60.249 55.000 18.45 0.00 0.00 2.29
566 602 2.364448 ACCTCCGGCTCCTTCTCC 60.364 66.667 0.00 0.00 0.00 3.71
568 604 2.685380 CCACCTCCGGCTCCTTCT 60.685 66.667 0.00 0.00 0.00 2.85
569 605 3.787001 CCCACCTCCGGCTCCTTC 61.787 72.222 0.00 0.00 0.00 3.46
570 606 4.658786 ACCCACCTCCGGCTCCTT 62.659 66.667 0.00 0.00 0.00 3.36
573 609 4.083862 GTCACCCACCTCCGGCTC 62.084 72.222 0.00 0.00 0.00 4.70
577 613 4.373116 CACCGTCACCCACCTCCG 62.373 72.222 0.00 0.00 0.00 4.63
654 690 3.649981 AGAGCCACATGTGCTATAGGAAT 59.350 43.478 20.81 0.00 39.69 3.01
683 719 3.561143 CAGCTGGTGGTCTAGACTCTAT 58.439 50.000 21.88 0.43 0.00 1.98
835 883 1.730902 CTCCTCGCTCGTGTGTGTG 60.731 63.158 0.00 0.00 0.00 3.82
836 884 1.857318 CTCTCCTCGCTCGTGTGTGT 61.857 60.000 0.00 0.00 0.00 3.72
837 885 1.154131 CTCTCCTCGCTCGTGTGTG 60.154 63.158 0.00 0.00 0.00 3.82
981 1043 1.154599 GACGAGCACGACGTAACGA 60.155 57.895 20.89 0.00 43.97 3.85
985 1047 1.135939 CCATGACGAGCACGACGTA 59.864 57.895 11.40 0.00 43.97 3.57
1206 1275 1.179814 AGAGGTTGTCGAACTCGCCT 61.180 55.000 0.00 0.00 39.60 5.52
1737 1821 0.877071 GCCATATGATCTGCAACGGG 59.123 55.000 3.65 0.00 0.00 5.28
2599 2725 0.243907 CGATCGTCAGGACACCAACT 59.756 55.000 7.03 0.00 0.00 3.16
2607 2733 2.407428 AAGAGCGCGATCGTCAGGA 61.407 57.895 19.77 0.00 38.14 3.86
2632 2758 2.159085 AGGAAGAAACGGGCGAGAATAG 60.159 50.000 0.00 0.00 0.00 1.73
2649 2777 5.353123 CGATTTTATCCCTGTTCGAAAGGAA 59.647 40.000 21.00 7.59 36.91 3.36
2656 2784 1.332904 GCGCGATTTTATCCCTGTTCG 60.333 52.381 12.10 0.00 0.00 3.95
2881 3013 0.248377 ATAACAGTCGCGCGTACTCC 60.248 55.000 30.98 13.28 0.00 3.85
2883 3015 0.169672 ACATAACAGTCGCGCGTACT 59.830 50.000 30.98 26.29 0.00 2.73
2884 3016 0.293723 CACATAACAGTCGCGCGTAC 59.706 55.000 30.98 24.53 0.00 3.67
2935 3073 1.304891 CCAAGGAGGTATTTCCCCCA 58.695 55.000 0.00 0.00 38.02 4.96
2936 3074 0.106167 GCCAAGGAGGTATTTCCCCC 60.106 60.000 0.00 0.00 40.61 5.40
2937 3075 0.927029 AGCCAAGGAGGTATTTCCCC 59.073 55.000 0.00 0.00 40.61 4.81
2948 3087 2.243774 ATCCTCCGGAGAGCCAAGGA 62.244 60.000 33.39 20.42 45.09 3.36
2960 3099 8.657074 TTTTAATATCAAGTACACATCCTCCG 57.343 34.615 0.00 0.00 0.00 4.63
3025 3172 7.114811 CACAACAGAAGGTCAAATTTATTTCCG 59.885 37.037 0.00 0.00 0.00 4.30
3051 3199 2.036933 CGTGAAGCTTTTTGTTCGAGC 58.963 47.619 0.00 0.00 36.68 5.03
3107 3256 7.392418 ACCTTACTAGTTGTCCTAATTTGGTC 58.608 38.462 0.00 1.14 0.00 4.02
3109 3258 8.316214 TGTACCTTACTAGTTGTCCTAATTTGG 58.684 37.037 0.00 0.00 0.00 3.28
3110 3259 9.886132 ATGTACCTTACTAGTTGTCCTAATTTG 57.114 33.333 0.00 0.00 0.00 2.32
3123 3272 4.875536 TGCAATGCACATGTACCTTACTAG 59.124 41.667 2.72 0.00 31.71 2.57
3124 3273 4.837972 TGCAATGCACATGTACCTTACTA 58.162 39.130 2.72 0.00 31.71 1.82
3125 3274 3.684908 TGCAATGCACATGTACCTTACT 58.315 40.909 2.72 0.00 31.71 2.24
3140 3289 2.536803 GCCAAATCTTATGCGTGCAATG 59.463 45.455 0.00 0.00 0.00 2.82
3141 3290 2.166050 TGCCAAATCTTATGCGTGCAAT 59.834 40.909 0.00 0.00 0.00 3.56
3142 3291 1.543358 TGCCAAATCTTATGCGTGCAA 59.457 42.857 0.00 0.00 0.00 4.08
3143 3292 1.172175 TGCCAAATCTTATGCGTGCA 58.828 45.000 0.00 0.00 0.00 4.57
3144 3293 1.919918 GTTGCCAAATCTTATGCGTGC 59.080 47.619 0.00 0.00 0.00 5.34
3145 3294 2.094803 TGGTTGCCAAATCTTATGCGTG 60.095 45.455 0.00 0.00 0.00 5.34
3146 3295 2.166829 TGGTTGCCAAATCTTATGCGT 58.833 42.857 0.00 0.00 0.00 5.24
3147 3296 2.937469 TGGTTGCCAAATCTTATGCG 57.063 45.000 0.00 0.00 0.00 4.73
3157 3306 7.389053 GGTGTTTATTCATAATTTGGTTGCCAA 59.611 33.333 0.00 0.00 42.29 4.52
3158 3307 6.876257 GGTGTTTATTCATAATTTGGTTGCCA 59.124 34.615 0.00 0.00 0.00 4.92
3159 3308 6.876257 TGGTGTTTATTCATAATTTGGTTGCC 59.124 34.615 0.00 0.00 0.00 4.52
3160 3309 7.386299 TGTGGTGTTTATTCATAATTTGGTTGC 59.614 33.333 0.00 0.00 0.00 4.17
3161 3310 8.707839 GTGTGGTGTTTATTCATAATTTGGTTG 58.292 33.333 0.00 0.00 0.00 3.77
3162 3311 8.646900 AGTGTGGTGTTTATTCATAATTTGGTT 58.353 29.630 0.00 0.00 0.00 3.67
3163 3312 8.189119 AGTGTGGTGTTTATTCATAATTTGGT 57.811 30.769 0.00 0.00 0.00 3.67
3168 3317 9.845740 TGCTATAGTGTGGTGTTTATTCATAAT 57.154 29.630 0.84 0.00 0.00 1.28
3169 3318 9.845740 ATGCTATAGTGTGGTGTTTATTCATAA 57.154 29.630 0.84 0.00 0.00 1.90
3170 3319 9.271828 CATGCTATAGTGTGGTGTTTATTCATA 57.728 33.333 0.84 0.00 0.00 2.15
3171 3320 7.775093 ACATGCTATAGTGTGGTGTTTATTCAT 59.225 33.333 0.84 0.00 0.00 2.57
3172 3321 7.109501 ACATGCTATAGTGTGGTGTTTATTCA 58.890 34.615 0.84 0.00 0.00 2.57
3173 3322 7.553881 ACATGCTATAGTGTGGTGTTTATTC 57.446 36.000 0.84 0.00 0.00 1.75
3174 3323 9.109393 CTTACATGCTATAGTGTGGTGTTTATT 57.891 33.333 0.84 0.00 0.00 1.40
3175 3324 8.265055 ACTTACATGCTATAGTGTGGTGTTTAT 58.735 33.333 0.84 0.00 0.00 1.40
3176 3325 7.617225 ACTTACATGCTATAGTGTGGTGTTTA 58.383 34.615 0.84 0.00 0.00 2.01
3177 3326 6.472887 ACTTACATGCTATAGTGTGGTGTTT 58.527 36.000 0.84 0.00 0.00 2.83
3178 3327 6.049955 ACTTACATGCTATAGTGTGGTGTT 57.950 37.500 0.84 0.00 0.00 3.32
3179 3328 5.677319 ACTTACATGCTATAGTGTGGTGT 57.323 39.130 0.84 2.93 0.00 4.16
3180 3329 6.985188 AAACTTACATGCTATAGTGTGGTG 57.015 37.500 0.84 0.00 0.00 4.17
3181 3330 7.165485 TCAAAACTTACATGCTATAGTGTGGT 58.835 34.615 0.84 1.00 0.00 4.16
3182 3331 7.334421 ACTCAAAACTTACATGCTATAGTGTGG 59.666 37.037 0.84 0.46 0.00 4.17
3183 3332 8.256611 ACTCAAAACTTACATGCTATAGTGTG 57.743 34.615 0.84 3.54 0.00 3.82
3184 3333 8.094548 TGACTCAAAACTTACATGCTATAGTGT 58.905 33.333 0.84 1.50 0.00 3.55
3185 3334 8.479313 TGACTCAAAACTTACATGCTATAGTG 57.521 34.615 0.84 0.00 0.00 2.74
3191 3340 8.562892 GCATATATGACTCAAAACTTACATGCT 58.437 33.333 17.10 0.00 29.91 3.79
3192 3341 8.344831 TGCATATATGACTCAAAACTTACATGC 58.655 33.333 17.10 0.00 31.73 4.06
3195 3344 9.612066 TCATGCATATATGACTCAAAACTTACA 57.388 29.630 17.10 0.53 32.39 2.41
3198 3347 9.128404 ACATCATGCATATATGACTCAAAACTT 57.872 29.630 21.83 0.16 39.68 2.66
3199 3348 8.687292 ACATCATGCATATATGACTCAAAACT 57.313 30.769 21.83 0.72 39.68 2.66
3203 3352 9.595823 CATCTACATCATGCATATATGACTCAA 57.404 33.333 21.83 7.90 39.68 3.02
3204 3353 8.755977 ACATCTACATCATGCATATATGACTCA 58.244 33.333 21.83 5.50 39.68 3.41
3205 3354 9.597170 AACATCTACATCATGCATATATGACTC 57.403 33.333 21.83 0.00 39.68 3.36
3206 3355 9.597170 GAACATCTACATCATGCATATATGACT 57.403 33.333 21.83 8.23 39.68 3.41
3207 3356 8.538039 CGAACATCTACATCATGCATATATGAC 58.462 37.037 21.83 8.34 39.68 3.06
3208 3357 8.253113 ACGAACATCTACATCATGCATATATGA 58.747 33.333 21.83 8.89 41.00 2.15
3209 3358 8.416485 ACGAACATCTACATCATGCATATATG 57.584 34.615 16.02 16.02 0.00 1.78
3210 3359 9.440773 AAACGAACATCTACATCATGCATATAT 57.559 29.630 0.00 0.00 0.00 0.86
3211 3360 8.831715 AAACGAACATCTACATCATGCATATA 57.168 30.769 0.00 0.00 0.00 0.86
3212 3361 7.734924 AAACGAACATCTACATCATGCATAT 57.265 32.000 0.00 0.00 0.00 1.78
3213 3362 8.655651 TTAAACGAACATCTACATCATGCATA 57.344 30.769 0.00 0.00 0.00 3.14
3214 3363 7.552458 TTAAACGAACATCTACATCATGCAT 57.448 32.000 0.00 0.00 0.00 3.96
3215 3364 6.976636 TTAAACGAACATCTACATCATGCA 57.023 33.333 0.00 0.00 0.00 3.96
3216 3365 8.338259 AGAATTAAACGAACATCTACATCATGC 58.662 33.333 0.00 0.00 0.00 4.06
3222 3371 9.661563 ACCATAAGAATTAAACGAACATCTACA 57.338 29.630 0.00 0.00 32.17 2.74
3225 3374 9.226606 TGAACCATAAGAATTAAACGAACATCT 57.773 29.630 0.00 0.00 32.17 2.90
3228 3377 8.455682 GGATGAACCATAAGAATTAAACGAACA 58.544 33.333 0.00 0.00 38.79 3.18
3229 3378 7.913821 GGGATGAACCATAAGAATTAAACGAAC 59.086 37.037 0.00 0.00 41.20 3.95
3230 3379 7.612244 TGGGATGAACCATAAGAATTAAACGAA 59.388 33.333 0.00 0.00 41.20 3.85
3231 3380 7.113437 TGGGATGAACCATAAGAATTAAACGA 58.887 34.615 0.00 0.00 41.20 3.85
3232 3381 7.328277 TGGGATGAACCATAAGAATTAAACG 57.672 36.000 0.00 0.00 41.20 3.60
3245 3394 3.581101 TGGTTTTGAATGGGATGAACCA 58.419 40.909 1.90 1.90 46.24 3.67
3246 3395 4.615588 TTGGTTTTGAATGGGATGAACC 57.384 40.909 0.00 0.00 37.60 3.62
3247 3396 7.386059 ACTAATTGGTTTTGAATGGGATGAAC 58.614 34.615 0.00 0.00 0.00 3.18
3248 3397 7.552050 ACTAATTGGTTTTGAATGGGATGAA 57.448 32.000 0.00 0.00 0.00 2.57
3249 3398 7.552050 AACTAATTGGTTTTGAATGGGATGA 57.448 32.000 0.65 0.00 0.00 2.92
3250 3399 8.620116 AAAACTAATTGGTTTTGAATGGGATG 57.380 30.769 26.08 0.00 44.48 3.51
3311 3460 9.534565 TGTTTTTACTTTATGCTTTACAATGCA 57.465 25.926 5.16 5.16 42.24 3.96
3321 3470 9.717942 TGCCATTATTTGTTTTTACTTTATGCT 57.282 25.926 0.00 0.00 0.00 3.79
3381 3530 9.282569 GCACTTCTCCATTGATCTATAATCTTT 57.717 33.333 0.00 0.00 0.00 2.52
3382 3531 8.658619 AGCACTTCTCCATTGATCTATAATCTT 58.341 33.333 0.00 0.00 0.00 2.40
3383 3532 8.204903 AGCACTTCTCCATTGATCTATAATCT 57.795 34.615 0.00 0.00 0.00 2.40
3384 3533 8.719648 CAAGCACTTCTCCATTGATCTATAATC 58.280 37.037 0.00 0.00 0.00 1.75
3385 3534 8.216423 ACAAGCACTTCTCCATTGATCTATAAT 58.784 33.333 0.00 0.00 0.00 1.28
3386 3535 7.568349 ACAAGCACTTCTCCATTGATCTATAA 58.432 34.615 0.00 0.00 0.00 0.98
3387 3536 7.129457 ACAAGCACTTCTCCATTGATCTATA 57.871 36.000 0.00 0.00 0.00 1.31
3388 3537 5.999044 ACAAGCACTTCTCCATTGATCTAT 58.001 37.500 0.00 0.00 0.00 1.98
3389 3538 5.426689 ACAAGCACTTCTCCATTGATCTA 57.573 39.130 0.00 0.00 0.00 1.98
3390 3539 4.298103 ACAAGCACTTCTCCATTGATCT 57.702 40.909 0.00 0.00 0.00 2.75
3391 3540 5.382618 AAACAAGCACTTCTCCATTGATC 57.617 39.130 0.00 0.00 0.00 2.92
3392 3541 5.796424 AAAACAAGCACTTCTCCATTGAT 57.204 34.783 0.00 0.00 0.00 2.57
3393 3542 5.596836 AAAAACAAGCACTTCTCCATTGA 57.403 34.783 0.00 0.00 0.00 2.57
3425 3574 5.750067 CCATGGTTGAACTTAAGCATAATGC 59.250 40.000 2.57 0.00 44.36 3.56
3426 3575 7.099266 TCCATGGTTGAACTTAAGCATAATG 57.901 36.000 12.58 0.00 44.36 1.90
3427 3576 6.891908 ACTCCATGGTTGAACTTAAGCATAAT 59.108 34.615 12.58 0.00 44.36 1.28
3428 3577 6.245408 ACTCCATGGTTGAACTTAAGCATAA 58.755 36.000 12.58 0.00 44.36 1.90
3429 3578 5.815581 ACTCCATGGTTGAACTTAAGCATA 58.184 37.500 12.58 0.00 44.36 3.14
3430 3579 4.666512 ACTCCATGGTTGAACTTAAGCAT 58.333 39.130 12.58 0.00 46.36 3.79
3431 3580 4.098914 ACTCCATGGTTGAACTTAAGCA 57.901 40.909 12.58 0.00 41.63 3.91
3432 3581 6.599638 AGAATACTCCATGGTTGAACTTAAGC 59.400 38.462 12.58 0.00 0.00 3.09
3433 3582 9.319143 CTAGAATACTCCATGGTTGAACTTAAG 57.681 37.037 12.58 0.00 0.00 1.85
3434 3583 9.042450 TCTAGAATACTCCATGGTTGAACTTAA 57.958 33.333 12.58 0.00 0.00 1.85
3435 3584 8.603898 TCTAGAATACTCCATGGTTGAACTTA 57.396 34.615 12.58 0.00 0.00 2.24
3436 3585 7.496346 TCTAGAATACTCCATGGTTGAACTT 57.504 36.000 12.58 0.00 0.00 2.66
3437 3586 7.682787 ATCTAGAATACTCCATGGTTGAACT 57.317 36.000 12.58 8.25 0.00 3.01
3438 3587 7.770897 ACAATCTAGAATACTCCATGGTTGAAC 59.229 37.037 12.58 0.81 0.00 3.18
3439 3588 7.861629 ACAATCTAGAATACTCCATGGTTGAA 58.138 34.615 12.58 0.00 0.00 2.69
3440 3589 7.437713 ACAATCTAGAATACTCCATGGTTGA 57.562 36.000 12.58 0.00 0.00 3.18
3441 3590 8.204160 TGTACAATCTAGAATACTCCATGGTTG 58.796 37.037 12.58 8.75 0.00 3.77
3442 3591 8.319057 TGTACAATCTAGAATACTCCATGGTT 57.681 34.615 12.58 2.52 0.00 3.67
3443 3592 7.914427 TGTACAATCTAGAATACTCCATGGT 57.086 36.000 12.58 0.00 0.00 3.55
3444 3593 8.370940 ACATGTACAATCTAGAATACTCCATGG 58.629 37.037 4.97 4.97 31.51 3.66
3445 3594 9.201127 CACATGTACAATCTAGAATACTCCATG 57.799 37.037 0.00 14.79 0.00 3.66
3446 3595 8.370940 CCACATGTACAATCTAGAATACTCCAT 58.629 37.037 0.00 0.00 0.00 3.41
3447 3596 7.344612 ACCACATGTACAATCTAGAATACTCCA 59.655 37.037 0.00 0.00 0.00 3.86
3448 3597 7.727181 ACCACATGTACAATCTAGAATACTCC 58.273 38.462 0.00 0.00 0.00 3.85
3449 3598 9.900710 CTACCACATGTACAATCTAGAATACTC 57.099 37.037 0.00 0.00 0.00 2.59
3450 3599 9.642343 TCTACCACATGTACAATCTAGAATACT 57.358 33.333 0.00 0.00 0.00 2.12
3453 3602 9.988815 GATTCTACCACATGTACAATCTAGAAT 57.011 33.333 16.59 16.59 34.08 2.40
3454 3603 9.201989 AGATTCTACCACATGTACAATCTAGAA 57.798 33.333 0.00 6.93 40.96 2.10
3455 3604 8.633561 CAGATTCTACCACATGTACAATCTAGA 58.366 37.037 0.00 0.00 40.86 2.43
3456 3605 7.869937 CCAGATTCTACCACATGTACAATCTAG 59.130 40.741 0.00 0.00 40.86 2.43
3457 3606 7.344612 ACCAGATTCTACCACATGTACAATCTA 59.655 37.037 0.00 0.00 40.86 1.98
3458 3607 6.156949 ACCAGATTCTACCACATGTACAATCT 59.843 38.462 0.00 4.77 42.47 2.40
3459 3608 6.258727 CACCAGATTCTACCACATGTACAATC 59.741 42.308 0.00 2.53 35.95 2.67
3460 3609 6.115446 CACCAGATTCTACCACATGTACAAT 58.885 40.000 0.00 0.00 0.00 2.71
3461 3610 5.487433 CACCAGATTCTACCACATGTACAA 58.513 41.667 0.00 0.00 0.00 2.41
3462 3611 4.081142 CCACCAGATTCTACCACATGTACA 60.081 45.833 0.00 0.00 0.00 2.90
3463 3612 4.161565 TCCACCAGATTCTACCACATGTAC 59.838 45.833 0.00 0.00 0.00 2.90
3464 3613 4.358214 TCCACCAGATTCTACCACATGTA 58.642 43.478 0.00 0.00 0.00 2.29
3465 3614 3.181329 TCCACCAGATTCTACCACATGT 58.819 45.455 0.00 0.00 0.00 3.21
3466 3615 3.912496 TCCACCAGATTCTACCACATG 57.088 47.619 0.00 0.00 0.00 3.21
3467 3616 4.228210 ACATTCCACCAGATTCTACCACAT 59.772 41.667 0.00 0.00 0.00 3.21
3468 3617 3.587061 ACATTCCACCAGATTCTACCACA 59.413 43.478 0.00 0.00 0.00 4.17
3469 3618 4.222124 ACATTCCACCAGATTCTACCAC 57.778 45.455 0.00 0.00 0.00 4.16
3470 3619 5.277250 TCTACATTCCACCAGATTCTACCA 58.723 41.667 0.00 0.00 0.00 3.25
3471 3620 5.871396 TCTACATTCCACCAGATTCTACC 57.129 43.478 0.00 0.00 0.00 3.18
3472 3621 7.055667 TCATCTACATTCCACCAGATTCTAC 57.944 40.000 0.00 0.00 0.00 2.59
3473 3622 7.862274 ATCATCTACATTCCACCAGATTCTA 57.138 36.000 0.00 0.00 0.00 2.10
3474 3623 6.760440 ATCATCTACATTCCACCAGATTCT 57.240 37.500 0.00 0.00 0.00 2.40
3475 3624 7.768120 GGATATCATCTACATTCCACCAGATTC 59.232 40.741 4.83 0.00 0.00 2.52
3476 3625 7.238305 TGGATATCATCTACATTCCACCAGATT 59.762 37.037 4.83 0.00 0.00 2.40
3477 3626 6.732390 TGGATATCATCTACATTCCACCAGAT 59.268 38.462 4.83 0.00 0.00 2.90
3478 3627 6.084060 TGGATATCATCTACATTCCACCAGA 58.916 40.000 4.83 0.00 0.00 3.86
3479 3628 6.364568 TGGATATCATCTACATTCCACCAG 57.635 41.667 4.83 0.00 0.00 4.00
3480 3629 6.533730 GTTGGATATCATCTACATTCCACCA 58.466 40.000 4.83 0.00 33.20 4.17
3481 3630 5.639506 CGTTGGATATCATCTACATTCCACC 59.360 44.000 4.83 0.00 33.20 4.61
3482 3631 5.639506 CCGTTGGATATCATCTACATTCCAC 59.360 44.000 4.83 0.00 33.20 4.02
3483 3632 5.793817 CCGTTGGATATCATCTACATTCCA 58.206 41.667 4.83 0.00 0.00 3.53
3484 3633 4.631813 GCCGTTGGATATCATCTACATTCC 59.368 45.833 4.83 0.00 0.00 3.01
3485 3634 4.631813 GGCCGTTGGATATCATCTACATTC 59.368 45.833 4.83 0.00 0.00 2.67
3486 3635 4.579869 GGCCGTTGGATATCATCTACATT 58.420 43.478 4.83 0.00 0.00 2.71
3487 3636 3.368427 CGGCCGTTGGATATCATCTACAT 60.368 47.826 19.50 0.00 0.00 2.29
3488 3637 2.029380 CGGCCGTTGGATATCATCTACA 60.029 50.000 19.50 0.00 0.00 2.74
3489 3638 2.607187 CGGCCGTTGGATATCATCTAC 58.393 52.381 19.50 0.00 0.00 2.59
3490 3639 1.548719 CCGGCCGTTGGATATCATCTA 59.451 52.381 26.12 0.00 0.00 1.98
3491 3640 0.321671 CCGGCCGTTGGATATCATCT 59.678 55.000 26.12 0.00 0.00 2.90
3492 3641 0.034896 ACCGGCCGTTGGATATCATC 59.965 55.000 26.12 0.00 0.00 2.92
3493 3642 1.275291 CTACCGGCCGTTGGATATCAT 59.725 52.381 26.12 0.00 0.00 2.45
3494 3643 0.677288 CTACCGGCCGTTGGATATCA 59.323 55.000 26.12 0.00 0.00 2.15
3495 3644 0.677842 ACTACCGGCCGTTGGATATC 59.322 55.000 26.12 0.00 0.00 1.63
3496 3645 1.069668 GAACTACCGGCCGTTGGATAT 59.930 52.381 26.12 3.81 0.00 1.63
3497 3646 0.461135 GAACTACCGGCCGTTGGATA 59.539 55.000 26.12 7.24 0.00 2.59
3498 3647 1.219935 GAACTACCGGCCGTTGGAT 59.780 57.895 26.12 6.43 0.00 3.41
3499 3648 1.880819 GAGAACTACCGGCCGTTGGA 61.881 60.000 26.12 5.05 0.00 3.53
3500 3649 1.447314 GAGAACTACCGGCCGTTGG 60.447 63.158 26.12 15.69 0.00 3.77
3501 3650 1.804326 CGAGAACTACCGGCCGTTG 60.804 63.158 26.12 15.69 0.00 4.10
3502 3651 2.570181 CGAGAACTACCGGCCGTT 59.430 61.111 26.12 13.84 0.00 4.44
3503 3652 3.446570 CCGAGAACTACCGGCCGT 61.447 66.667 26.12 14.84 39.22 5.68
3504 3653 2.012902 AATCCGAGAACTACCGGCCG 62.013 60.000 21.04 21.04 44.96 6.13
3505 3654 0.177373 AAATCCGAGAACTACCGGCC 59.823 55.000 0.00 0.00 44.96 6.13
3506 3655 1.287425 CAAATCCGAGAACTACCGGC 58.713 55.000 0.00 0.00 44.96 6.13
3507 3656 1.287425 GCAAATCCGAGAACTACCGG 58.713 55.000 0.00 0.00 46.57 5.28
3508 3657 1.287425 GGCAAATCCGAGAACTACCG 58.713 55.000 0.00 0.00 0.00 4.02
3509 3658 2.396590 TGGCAAATCCGAGAACTACC 57.603 50.000 0.00 0.00 37.80 3.18
3510 3659 3.798202 AGATGGCAAATCCGAGAACTAC 58.202 45.455 0.00 0.00 37.80 2.73
3511 3660 3.706594 AGAGATGGCAAATCCGAGAACTA 59.293 43.478 0.00 0.00 37.80 2.24
3512 3661 2.503356 AGAGATGGCAAATCCGAGAACT 59.497 45.455 0.00 0.00 37.80 3.01
3513 3662 2.611292 CAGAGATGGCAAATCCGAGAAC 59.389 50.000 0.00 0.00 37.80 3.01
3514 3663 2.910199 CAGAGATGGCAAATCCGAGAA 58.090 47.619 0.00 0.00 37.80 2.87
3515 3664 1.473965 GCAGAGATGGCAAATCCGAGA 60.474 52.381 0.00 0.00 37.80 4.04
3516 3665 0.942962 GCAGAGATGGCAAATCCGAG 59.057 55.000 0.00 0.00 37.80 4.63
3517 3666 0.252761 TGCAGAGATGGCAAATCCGA 59.747 50.000 0.00 0.00 38.54 4.55
3518 3667 0.379669 GTGCAGAGATGGCAAATCCG 59.620 55.000 0.00 0.00 43.91 4.18
3519 3668 0.743097 GGTGCAGAGATGGCAAATCC 59.257 55.000 0.00 0.00 43.91 3.01
3520 3669 0.379669 CGGTGCAGAGATGGCAAATC 59.620 55.000 0.00 0.00 43.91 2.17
3521 3670 0.322816 ACGGTGCAGAGATGGCAAAT 60.323 50.000 0.00 0.00 43.91 2.32
3522 3671 0.955428 GACGGTGCAGAGATGGCAAA 60.955 55.000 0.00 0.00 43.91 3.68
3523 3672 1.375908 GACGGTGCAGAGATGGCAA 60.376 57.895 0.00 0.00 43.91 4.52
3524 3673 2.110757 TTGACGGTGCAGAGATGGCA 62.111 55.000 0.00 0.00 39.32 4.92
3525 3674 0.955428 TTTGACGGTGCAGAGATGGC 60.955 55.000 0.00 0.00 0.00 4.40
3526 3675 1.742761 ATTTGACGGTGCAGAGATGG 58.257 50.000 0.00 0.00 0.00 3.51
3527 3676 2.159476 CCAATTTGACGGTGCAGAGATG 60.159 50.000 0.00 0.00 0.00 2.90
3528 3677 2.086869 CCAATTTGACGGTGCAGAGAT 58.913 47.619 0.00 0.00 0.00 2.75
3529 3678 1.522668 CCAATTTGACGGTGCAGAGA 58.477 50.000 0.00 0.00 0.00 3.10
3530 3679 0.109597 GCCAATTTGACGGTGCAGAG 60.110 55.000 0.00 0.00 0.00 3.35
3531 3680 0.537143 AGCCAATTTGACGGTGCAGA 60.537 50.000 0.00 0.00 0.00 4.26
3532 3681 0.314935 AAGCCAATTTGACGGTGCAG 59.685 50.000 0.00 0.00 0.00 4.41
3533 3682 0.313672 GAAGCCAATTTGACGGTGCA 59.686 50.000 0.00 0.00 0.00 4.57
3534 3683 0.313672 TGAAGCCAATTTGACGGTGC 59.686 50.000 0.00 0.00 0.00 5.01
3535 3684 2.415893 GGATGAAGCCAATTTGACGGTG 60.416 50.000 0.00 0.00 0.00 4.94
3536 3685 1.818674 GGATGAAGCCAATTTGACGGT 59.181 47.619 0.00 0.00 0.00 4.83
3537 3686 1.818060 TGGATGAAGCCAATTTGACGG 59.182 47.619 0.00 0.00 34.31 4.79
3538 3687 3.574284 TTGGATGAAGCCAATTTGACG 57.426 42.857 0.00 0.00 42.75 4.35
3545 3694 0.109532 TGGTCGTTGGATGAAGCCAA 59.890 50.000 0.00 0.00 45.28 4.52
3546 3695 0.327924 ATGGTCGTTGGATGAAGCCA 59.672 50.000 0.00 0.00 35.78 4.75
3547 3696 1.017387 GATGGTCGTTGGATGAAGCC 58.983 55.000 0.00 0.00 0.00 4.35
3548 3697 2.029838 AGATGGTCGTTGGATGAAGC 57.970 50.000 0.00 0.00 0.00 3.86
3549 3698 4.002982 TGAAAGATGGTCGTTGGATGAAG 58.997 43.478 0.00 0.00 0.00 3.02
3550 3699 4.014569 TGAAAGATGGTCGTTGGATGAA 57.985 40.909 0.00 0.00 0.00 2.57
3551 3700 3.694043 TGAAAGATGGTCGTTGGATGA 57.306 42.857 0.00 0.00 0.00 2.92
3552 3701 4.216257 ACTTTGAAAGATGGTCGTTGGATG 59.784 41.667 12.53 0.00 0.00 3.51
3553 3702 4.398319 ACTTTGAAAGATGGTCGTTGGAT 58.602 39.130 12.53 0.00 0.00 3.41
3554 3703 3.815809 ACTTTGAAAGATGGTCGTTGGA 58.184 40.909 12.53 0.00 0.00 3.53
3555 3704 4.568152 AACTTTGAAAGATGGTCGTTGG 57.432 40.909 12.53 0.00 0.00 3.77
3556 3705 6.314784 GGATAACTTTGAAAGATGGTCGTTG 58.685 40.000 12.53 0.00 0.00 4.10
3557 3706 5.121768 CGGATAACTTTGAAAGATGGTCGTT 59.878 40.000 12.53 0.00 0.00 3.85
3558 3707 4.630069 CGGATAACTTTGAAAGATGGTCGT 59.370 41.667 12.53 0.00 0.00 4.34
3559 3708 4.494199 GCGGATAACTTTGAAAGATGGTCG 60.494 45.833 12.53 10.34 0.00 4.79
3560 3709 4.394920 TGCGGATAACTTTGAAAGATGGTC 59.605 41.667 12.53 3.31 0.00 4.02
3561 3710 4.331968 TGCGGATAACTTTGAAAGATGGT 58.668 39.130 12.53 0.00 0.00 3.55
3562 3711 4.963276 TGCGGATAACTTTGAAAGATGG 57.037 40.909 12.53 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.