Multiple sequence alignment - TraesCS3B01G401800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G401800 chr3B 100.000 3402 0 0 1 3402 636442895 636446296 0.000000e+00 6283.0
1 TraesCS3B01G401800 chr3B 88.623 167 3 6 3158 3324 636445966 636446116 4.480000e-44 189.0
2 TraesCS3B01G401800 chr3B 88.623 167 3 6 3072 3222 636446052 636446218 4.480000e-44 189.0
3 TraesCS3B01G401800 chr3B 97.561 41 1 0 3260 3300 636445966 636446006 1.690000e-08 71.3
4 TraesCS3B01G401800 chr3B 97.561 41 1 0 3072 3112 636446154 636446194 1.690000e-08 71.3
5 TraesCS3B01G401800 chr3D 87.231 1488 94 37 736 2165 477243591 477245040 0.000000e+00 1607.0
6 TraesCS3B01G401800 chr3D 95.172 290 14 0 2161 2450 477245085 477245374 3.090000e-125 459.0
7 TraesCS3B01G401800 chr3D 93.367 196 5 3 2433 2627 477245387 477245575 2.000000e-72 283.0
8 TraesCS3B01G401800 chr3D 78.973 409 64 12 1 389 427287660 427288066 3.370000e-65 259.0
9 TraesCS3B01G401800 chr3D 98.077 52 1 0 2671 2722 477245803 477245752 1.300000e-14 91.6
10 TraesCS3B01G401800 chr3D 96.875 32 1 0 3371 3402 612274798 612274767 2.000000e-03 54.7
11 TraesCS3B01G401800 chr3A 92.000 1150 63 12 1491 2623 620759897 620761034 0.000000e+00 1587.0
12 TraesCS3B01G401800 chr3A 87.539 642 40 9 798 1413 620759228 620759855 0.000000e+00 706.0
13 TraesCS3B01G401800 chr3A 79.622 476 49 25 2671 3107 620761029 620761495 7.140000e-77 298.0
14 TraesCS3B01G401800 chr3A 94.030 67 4 0 736 802 620759140 620759206 6.010000e-18 102.0
15 TraesCS3B01G401800 chr1D 77.859 682 120 20 1 657 223536613 223535938 8.850000e-106 394.0
16 TraesCS3B01G401800 chr1D 76.923 598 104 19 1 594 406662617 406662050 3.300000e-80 309.0
17 TraesCS3B01G401800 chr1D 100.000 30 0 0 3373 3402 458569812 458569841 4.740000e-04 56.5
18 TraesCS3B01G401800 chr6A 77.025 679 130 18 1 657 574590318 574590992 1.930000e-97 366.0
19 TraesCS3B01G401800 chr5D 77.492 662 113 19 12 659 334253148 334253787 6.940000e-97 364.0
20 TraesCS3B01G401800 chr1B 77.266 673 113 22 1 649 626493939 626494595 3.230000e-95 359.0
21 TraesCS3B01G401800 chr1B 96.875 32 1 0 3371 3402 350130868 350130837 2.000000e-03 54.7
22 TraesCS3B01G401800 chr7D 77.077 650 119 13 34 659 245362241 245362884 6.990000e-92 348.0
23 TraesCS3B01G401800 chr7B 77.458 590 101 18 92 659 709517830 709518409 1.180000e-84 324.0
24 TraesCS3B01G401800 chr6D 75.110 683 134 20 1 656 451624892 451624219 1.540000e-73 287.0
25 TraesCS3B01G401800 chr4D 77.096 489 96 12 155 636 31716637 31716158 5.600000e-68 268.0
26 TraesCS3B01G401800 chr4D 81.194 335 57 3 310 642 421543449 421543779 7.240000e-67 265.0
27 TraesCS3B01G401800 chr1A 74.675 616 130 21 59 657 18149085 18148479 2.030000e-62 250.0
28 TraesCS3B01G401800 chr1A 86.243 189 24 2 1 188 313202723 313202536 1.600000e-48 204.0
29 TraesCS3B01G401800 chr1A 96.875 32 1 0 3371 3402 318649092 318649061 2.000000e-03 54.7
30 TraesCS3B01G401800 chr1A 96.875 32 1 0 3371 3402 525576146 525576115 2.000000e-03 54.7
31 TraesCS3B01G401800 chr2B 73.814 569 114 25 116 653 786146239 786145675 3.460000e-45 193.0
32 TraesCS3B01G401800 chr2B 77.099 262 55 5 311 569 456335107 456334848 2.740000e-31 147.0
33 TraesCS3B01G401800 chr6B 100.000 32 0 0 3371 3402 484534256 484534225 3.670000e-05 60.2
34 TraesCS3B01G401800 chr6B 96.875 32 1 0 3371 3402 517142505 517142474 2.000000e-03 54.7
35 TraesCS3B01G401800 chr2A 100.000 32 0 0 3371 3402 759158282 759158313 3.670000e-05 60.2
36 TraesCS3B01G401800 chr4A 96.875 32 1 0 3371 3402 412998094 412998063 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G401800 chr3B 636442895 636446296 3401 False 1360.72 6283 94.473600 1 3402 5 chr3B.!!$F1 3401
1 TraesCS3B01G401800 chr3D 477243591 477245575 1984 False 783.00 1607 91.923333 736 2627 3 chr3D.!!$F2 1891
2 TraesCS3B01G401800 chr3A 620759140 620761495 2355 False 673.25 1587 88.297750 736 3107 4 chr3A.!!$F1 2371
3 TraesCS3B01G401800 chr1D 223535938 223536613 675 True 394.00 394 77.859000 1 657 1 chr1D.!!$R1 656
4 TraesCS3B01G401800 chr1D 406662050 406662617 567 True 309.00 309 76.923000 1 594 1 chr1D.!!$R2 593
5 TraesCS3B01G401800 chr6A 574590318 574590992 674 False 366.00 366 77.025000 1 657 1 chr6A.!!$F1 656
6 TraesCS3B01G401800 chr5D 334253148 334253787 639 False 364.00 364 77.492000 12 659 1 chr5D.!!$F1 647
7 TraesCS3B01G401800 chr1B 626493939 626494595 656 False 359.00 359 77.266000 1 649 1 chr1B.!!$F1 648
8 TraesCS3B01G401800 chr7D 245362241 245362884 643 False 348.00 348 77.077000 34 659 1 chr7D.!!$F1 625
9 TraesCS3B01G401800 chr7B 709517830 709518409 579 False 324.00 324 77.458000 92 659 1 chr7B.!!$F1 567
10 TraesCS3B01G401800 chr6D 451624219 451624892 673 True 287.00 287 75.110000 1 656 1 chr6D.!!$R1 655
11 TraesCS3B01G401800 chr1A 18148479 18149085 606 True 250.00 250 74.675000 59 657 1 chr1A.!!$R1 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
696 732 0.034616 CTCCAGGCCGATCCAAGATC 59.965 60.0 0.0 0.0 37.29 2.75 F
698 734 0.034616 CCAGGCCGATCCAAGATCTC 59.965 60.0 0.0 0.0 37.29 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1675 1772 0.043637 TTGGGAGGGGAGATTACCGT 59.956 55.0 0.0 0.0 0.0 4.83 R
2628 2820 0.178816 TTTTGGGAGGGATGGAGGGA 60.179 55.0 0.0 0.0 0.0 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 66 4.822026 CCGTCAAGGAAGACTTAGAACAT 58.178 43.478 0.00 0.00 45.00 2.71
168 173 2.408241 GCTAGTGGACGCGAGGTCT 61.408 63.158 15.93 8.47 45.35 3.85
188 194 1.516821 CAATGGAAATGGTGGCGCG 60.517 57.895 0.00 0.00 0.00 6.86
189 195 1.677300 AATGGAAATGGTGGCGCGA 60.677 52.632 12.10 0.00 0.00 5.87
212 223 2.142357 CTCTCGTTGTCGCACTGGGA 62.142 60.000 0.00 0.00 36.96 4.37
216 227 3.923864 TTGTCGCACTGGGACGCT 61.924 61.111 18.45 0.00 46.31 5.07
220 231 4.717629 CGCACTGGGACGCTCGAA 62.718 66.667 0.00 0.00 0.00 3.71
272 283 0.452784 GCATTGTTCTCGTCCGCAAC 60.453 55.000 0.00 0.00 0.00 4.17
291 302 4.853050 GCCTGCAGATGCGCCTCT 62.853 66.667 17.39 9.61 45.83 3.69
352 382 1.860950 GCTGCTCGCGATGAAATTAGA 59.139 47.619 10.36 0.00 0.00 2.10
440 470 1.329256 GCCGGTGCTATTCTAGGAGA 58.671 55.000 1.90 0.00 33.53 3.71
461 493 4.885325 AGAAACAGGTTGTACCGATGTTTT 59.115 37.500 13.90 5.70 42.82 2.43
464 496 4.457466 ACAGGTTGTACCGATGTTTTTCT 58.543 39.130 0.00 0.00 44.90 2.52
490 522 1.141019 GCTGGAACGCCGACATAGA 59.859 57.895 0.00 0.00 36.79 1.98
541 573 1.514678 GCGTTGAAGTGCCCATGTGA 61.515 55.000 0.00 0.00 0.00 3.58
547 579 0.892358 AAGTGCCCATGTGACTGCTG 60.892 55.000 0.00 0.00 0.00 4.41
554 586 1.741528 CATGTGACTGCTGCATGGTA 58.258 50.000 1.31 0.00 37.08 3.25
557 589 2.794103 TGTGACTGCTGCATGGTAAAT 58.206 42.857 1.31 0.00 0.00 1.40
574 609 0.176219 AATCCGGCATGCACAAATGG 59.824 50.000 21.36 10.64 0.00 3.16
621 657 1.537889 TCTCCATGGTGGGGTCGTT 60.538 57.895 12.58 0.00 39.64 3.85
630 666 2.195567 TGGGGTCGTTCTCGTCGTT 61.196 57.895 0.00 0.00 38.33 3.85
642 678 1.168407 TCGTCGTTGGAGACTTCGGT 61.168 55.000 0.00 0.00 38.90 4.69
649 685 0.039180 TGGAGACTTCGGTGGAGCTA 59.961 55.000 0.00 0.00 0.00 3.32
659 695 2.763710 TGGAGCTAGCCGGCATGA 60.764 61.111 31.54 12.70 34.17 3.07
660 696 2.280457 GGAGCTAGCCGGCATGAC 60.280 66.667 31.54 15.09 34.17 3.06
661 697 2.501128 GAGCTAGCCGGCATGACA 59.499 61.111 31.54 6.88 34.17 3.58
662 698 1.070445 GAGCTAGCCGGCATGACAT 59.930 57.895 31.54 9.39 34.17 3.06
663 699 1.226686 GAGCTAGCCGGCATGACATG 61.227 60.000 31.54 11.27 34.17 3.21
664 700 1.227645 GCTAGCCGGCATGACATGA 60.228 57.895 31.54 1.59 0.00 3.07
665 701 0.815213 GCTAGCCGGCATGACATGAA 60.815 55.000 31.54 0.72 0.00 2.57
666 702 0.940126 CTAGCCGGCATGACATGAAC 59.060 55.000 31.54 9.71 0.00 3.18
667 703 0.541392 TAGCCGGCATGACATGAACT 59.459 50.000 31.54 5.27 0.00 3.01
668 704 0.541392 AGCCGGCATGACATGAACTA 59.459 50.000 31.54 0.00 0.00 2.24
669 705 1.065491 AGCCGGCATGACATGAACTAA 60.065 47.619 31.54 0.00 0.00 2.24
670 706 1.949525 GCCGGCATGACATGAACTAAT 59.050 47.619 24.80 0.00 0.00 1.73
671 707 3.138304 GCCGGCATGACATGAACTAATA 58.862 45.455 24.80 0.00 0.00 0.98
672 708 3.563808 GCCGGCATGACATGAACTAATAA 59.436 43.478 24.80 0.00 0.00 1.40
673 709 4.216257 GCCGGCATGACATGAACTAATAAT 59.784 41.667 24.80 0.00 0.00 1.28
674 710 5.692814 CCGGCATGACATGAACTAATAATG 58.307 41.667 19.76 0.00 0.00 1.90
675 711 5.239306 CCGGCATGACATGAACTAATAATGT 59.761 40.000 19.76 0.00 37.24 2.71
676 712 6.365839 CGGCATGACATGAACTAATAATGTC 58.634 40.000 19.76 7.84 46.73 3.06
677 713 6.566564 CGGCATGACATGAACTAATAATGTCC 60.567 42.308 19.76 4.91 46.24 4.02
678 714 6.488006 GGCATGACATGAACTAATAATGTCCT 59.512 38.462 19.76 0.83 46.24 3.85
679 715 7.308229 GGCATGACATGAACTAATAATGTCCTC 60.308 40.741 19.76 0.00 46.24 3.71
680 716 7.308229 GCATGACATGAACTAATAATGTCCTCC 60.308 40.741 19.76 0.00 46.24 4.30
681 717 7.194112 TGACATGAACTAATAATGTCCTCCA 57.806 36.000 0.00 0.00 46.24 3.86
682 718 7.275183 TGACATGAACTAATAATGTCCTCCAG 58.725 38.462 0.00 0.00 46.24 3.86
683 719 6.595682 ACATGAACTAATAATGTCCTCCAGG 58.404 40.000 0.00 0.00 28.38 4.45
684 720 5.036117 TGAACTAATAATGTCCTCCAGGC 57.964 43.478 0.00 0.00 34.44 4.85
685 721 4.141482 TGAACTAATAATGTCCTCCAGGCC 60.141 45.833 0.00 0.00 34.44 5.19
686 722 2.368875 ACTAATAATGTCCTCCAGGCCG 59.631 50.000 0.00 0.00 34.44 6.13
687 723 1.507140 AATAATGTCCTCCAGGCCGA 58.493 50.000 0.00 0.00 34.44 5.54
688 724 1.734655 ATAATGTCCTCCAGGCCGAT 58.265 50.000 0.00 0.00 34.44 4.18
689 725 1.048601 TAATGTCCTCCAGGCCGATC 58.951 55.000 0.00 0.00 34.44 3.69
690 726 1.700042 AATGTCCTCCAGGCCGATCC 61.700 60.000 0.00 0.00 34.44 3.36
691 727 2.764128 GTCCTCCAGGCCGATCCA 60.764 66.667 0.00 0.00 37.29 3.41
692 728 2.040442 TCCTCCAGGCCGATCCAA 59.960 61.111 0.00 0.00 37.29 3.53
693 729 2.066393 TCCTCCAGGCCGATCCAAG 61.066 63.158 0.00 0.00 37.29 3.61
694 730 2.066393 CCTCCAGGCCGATCCAAGA 61.066 63.158 0.00 0.00 37.29 3.02
695 731 1.414061 CCTCCAGGCCGATCCAAGAT 61.414 60.000 0.00 0.00 37.29 2.40
696 732 0.034616 CTCCAGGCCGATCCAAGATC 59.965 60.000 0.00 0.00 37.29 2.75
697 733 0.399091 TCCAGGCCGATCCAAGATCT 60.399 55.000 0.00 0.00 37.29 2.75
698 734 0.034616 CCAGGCCGATCCAAGATCTC 59.965 60.000 0.00 0.00 37.29 2.75
699 735 1.047002 CAGGCCGATCCAAGATCTCT 58.953 55.000 0.00 0.00 37.29 3.10
700 736 1.000731 CAGGCCGATCCAAGATCTCTC 59.999 57.143 0.00 0.00 37.29 3.20
701 737 1.043816 GGCCGATCCAAGATCTCTCA 58.956 55.000 0.00 0.00 34.01 3.27
702 738 1.414181 GGCCGATCCAAGATCTCTCAA 59.586 52.381 0.00 0.00 34.01 3.02
703 739 2.158900 GGCCGATCCAAGATCTCTCAAA 60.159 50.000 0.00 0.00 34.01 2.69
704 740 3.495806 GGCCGATCCAAGATCTCTCAAAT 60.496 47.826 0.00 0.00 34.01 2.32
705 741 4.133078 GCCGATCCAAGATCTCTCAAATT 58.867 43.478 0.00 0.00 0.00 1.82
706 742 4.578105 GCCGATCCAAGATCTCTCAAATTT 59.422 41.667 0.00 0.00 0.00 1.82
707 743 5.277731 GCCGATCCAAGATCTCTCAAATTTC 60.278 44.000 0.00 0.00 0.00 2.17
708 744 5.238214 CCGATCCAAGATCTCTCAAATTTCC 59.762 44.000 0.00 0.00 0.00 3.13
709 745 6.054295 CGATCCAAGATCTCTCAAATTTCCT 58.946 40.000 0.00 0.00 0.00 3.36
710 746 6.541641 CGATCCAAGATCTCTCAAATTTCCTT 59.458 38.462 0.00 0.00 0.00 3.36
711 747 7.066766 CGATCCAAGATCTCTCAAATTTCCTTT 59.933 37.037 0.00 0.00 0.00 3.11
712 748 7.458409 TCCAAGATCTCTCAAATTTCCTTTG 57.542 36.000 0.00 0.00 44.70 2.77
731 767 9.748708 TTCCTTTGATTGTTTACATCTGAAAAG 57.251 29.630 0.00 0.00 0.00 2.27
732 768 7.867403 TCCTTTGATTGTTTACATCTGAAAAGC 59.133 33.333 0.00 0.00 0.00 3.51
733 769 7.652909 CCTTTGATTGTTTACATCTGAAAAGCA 59.347 33.333 0.00 0.00 0.00 3.91
734 770 8.578308 TTTGATTGTTTACATCTGAAAAGCAG 57.422 30.769 0.00 0.00 46.31 4.24
750 786 6.260050 TGAAAAGCAGGTGAACTTTGTACTAG 59.740 38.462 0.00 0.00 36.28 2.57
752 788 6.415206 AAGCAGGTGAACTTTGTACTAGTA 57.585 37.500 0.00 0.00 0.00 1.82
754 790 5.303589 AGCAGGTGAACTTTGTACTAGTACA 59.696 40.000 27.99 27.99 43.61 2.90
829 891 2.179517 CAGACGCGAGACCAGGAC 59.820 66.667 15.93 0.00 0.00 3.85
830 892 2.282251 AGACGCGAGACCAGGACA 60.282 61.111 15.93 0.00 0.00 4.02
831 893 1.679305 AGACGCGAGACCAGGACAT 60.679 57.895 15.93 0.00 0.00 3.06
832 894 1.517257 GACGCGAGACCAGGACATG 60.517 63.158 15.93 0.00 0.00 3.21
925 987 1.073199 CCGCTCCCCAGAAACAAGT 59.927 57.895 0.00 0.00 0.00 3.16
1203 1291 2.014068 GCGCAGGAGGTAATTTGCTCT 61.014 52.381 0.30 0.00 34.50 4.09
1206 1294 2.941720 GCAGGAGGTAATTTGCTCTGAG 59.058 50.000 0.00 0.00 33.88 3.35
1214 1302 5.045286 AGGTAATTTGCTCTGAGATTCTGGT 60.045 40.000 9.28 0.00 0.00 4.00
1270 1358 1.994467 CGCAATCACGTCAGCTCTC 59.006 57.895 0.00 0.00 0.00 3.20
1282 1375 2.423892 GTCAGCTCTCCTCACATACGAA 59.576 50.000 0.00 0.00 0.00 3.85
1286 1379 3.957497 AGCTCTCCTCACATACGAAATCT 59.043 43.478 0.00 0.00 0.00 2.40
1319 1412 3.873026 GATCGCGCAGGCTGCCTAT 62.873 63.158 32.08 22.15 41.12 2.57
1349 1442 0.607217 TCGCCTCCGTCAGAGTTGTA 60.607 55.000 0.00 0.00 41.47 2.41
1415 1508 1.006102 CGACGGTGAGCTCCACTTT 60.006 57.895 12.15 1.22 45.03 2.66
1420 1513 1.802069 GGTGAGCTCCACTTTCACTC 58.198 55.000 12.15 0.00 45.03 3.51
1421 1514 1.423395 GTGAGCTCCACTTTCACTCG 58.577 55.000 12.15 0.00 42.44 4.18
1422 1515 1.040646 TGAGCTCCACTTTCACTCGT 58.959 50.000 12.15 0.00 0.00 4.18
1423 1516 1.269778 TGAGCTCCACTTTCACTCGTG 60.270 52.381 12.15 0.00 0.00 4.35
1425 1518 1.891060 GCTCCACTTTCACTCGTGCG 61.891 60.000 0.00 0.00 0.00 5.34
1426 1519 0.597637 CTCCACTTTCACTCGTGCGT 60.598 55.000 0.00 0.00 0.00 5.24
1427 1520 0.669619 TCCACTTTCACTCGTGCGTA 59.330 50.000 0.00 0.00 0.00 4.42
1428 1521 0.782384 CCACTTTCACTCGTGCGTAC 59.218 55.000 0.00 0.00 0.00 3.67
1437 1530 3.077705 CGTGCGTACGGGAACATG 58.922 61.111 18.81 7.86 46.23 3.21
1438 1531 2.782615 GTGCGTACGGGAACATGC 59.217 61.111 18.39 0.00 0.00 4.06
1439 1532 2.435234 TGCGTACGGGAACATGCC 60.435 61.111 18.39 0.00 0.00 4.40
1440 1533 2.435234 GCGTACGGGAACATGCCA 60.435 61.111 18.39 0.00 0.00 4.92
1443 1536 0.951525 CGTACGGGAACATGCCACAA 60.952 55.000 7.57 0.00 0.00 3.33
1485 1578 3.755810 TTTTTGAGGAATCCGGCCA 57.244 47.368 2.24 0.00 0.00 5.36
1486 1579 2.002505 TTTTTGAGGAATCCGGCCAA 57.997 45.000 2.24 0.00 0.00 4.52
1487 1580 1.544724 TTTTGAGGAATCCGGCCAAG 58.455 50.000 2.24 0.00 0.00 3.61
1488 1581 0.323360 TTTGAGGAATCCGGCCAAGG 60.323 55.000 2.24 0.00 0.00 3.61
1489 1582 1.497309 TTGAGGAATCCGGCCAAGGT 61.497 55.000 2.24 0.00 0.00 3.50
1523 1620 1.043816 CTACCCTCGCCAGATCATGT 58.956 55.000 0.00 0.00 0.00 3.21
1527 1624 1.202734 CCCTCGCCAGATCATGTGAAT 60.203 52.381 0.00 0.00 0.00 2.57
1534 1631 3.741075 GCCAGATCATGTGAATACGGTGA 60.741 47.826 0.00 0.00 0.00 4.02
1572 1669 3.631049 GAAGAAGTGCGCGTTCGGC 62.631 63.158 8.43 8.53 35.95 5.54
1734 1836 4.092529 CACATTCTTTCACTCTCACCATCG 59.907 45.833 0.00 0.00 0.00 3.84
1767 1869 1.078848 GATCTGCCAGCGAACAGGT 60.079 57.895 0.00 0.00 34.57 4.00
1793 1895 2.032054 CGAGTTCAAGTTCTTGCTGCAA 59.968 45.455 15.16 15.16 0.00 4.08
1808 1910 3.411517 CAAGACCCCTCCGGCCAT 61.412 66.667 2.24 0.00 33.26 4.40
1845 1947 2.033141 GCAACAGGGCTCTGCAGA 59.967 61.111 15.27 17.19 44.59 4.26
2025 2133 2.719979 GCTTCATGCATGCCGAGG 59.280 61.111 22.25 13.17 42.31 4.63
2028 2136 0.463295 CTTCATGCATGCCGAGGAGT 60.463 55.000 22.25 0.00 0.00 3.85
2041 2149 4.008933 GGAGTCACCTGCGGCTGT 62.009 66.667 0.00 0.00 35.41 4.40
2091 2199 1.514087 GTACATGGAGCGAACCGGA 59.486 57.895 9.46 0.00 0.00 5.14
2137 2250 7.116948 CCCACTCTCATTTCGTTGATATATGAC 59.883 40.741 0.00 0.00 0.00 3.06
2191 2353 3.616379 CCTTGCAGAAAGACGAGAAGATC 59.384 47.826 0.00 0.00 38.24 2.75
2194 2356 2.803451 CAGAAAGACGAGAAGATCCCG 58.197 52.381 0.00 0.00 0.00 5.14
2224 2386 0.599558 GCAGAAGAGCAAACATGGCA 59.400 50.000 0.00 0.00 0.00 4.92
2240 2402 2.412525 CAGCAGCACAAAACGGCA 59.587 55.556 0.00 0.00 0.00 5.69
2285 2447 2.526077 GCGACGACATCATCTTGTACA 58.474 47.619 0.00 0.00 0.00 2.90
2299 2461 2.472695 TGTACAAGGAAGCTGCGAAT 57.527 45.000 0.00 0.00 0.00 3.34
2301 2463 3.259064 TGTACAAGGAAGCTGCGAATAC 58.741 45.455 0.00 0.00 0.00 1.89
2323 2485 1.094785 CGGCCAGGATGTTCGAAAAT 58.905 50.000 2.24 0.00 32.68 1.82
2338 2500 3.940852 TCGAAAATGACATGGTCTGGATG 59.059 43.478 0.00 0.00 33.15 3.51
2498 2690 3.891400 CGATGCATGCAACCCCGG 61.891 66.667 26.68 5.28 0.00 5.73
2539 2731 2.005537 GCAACGCAAACAGTCGCTG 61.006 57.895 5.47 5.47 37.52 5.18
2540 2732 2.005537 CAACGCAAACAGTCGCTGC 61.006 57.895 6.74 0.00 34.37 5.25
2541 2733 2.468670 AACGCAAACAGTCGCTGCA 61.469 52.632 0.00 0.00 35.78 4.41
2542 2734 2.425773 CGCAAACAGTCGCTGCAC 60.426 61.111 0.00 0.00 35.78 4.57
2543 2735 2.050985 GCAAACAGTCGCTGCACC 60.051 61.111 0.00 0.00 36.09 5.01
2544 2736 2.546494 GCAAACAGTCGCTGCACCT 61.546 57.895 0.00 0.00 36.09 4.00
2620 2812 7.406031 TCAGTGGTTTCGACTTCTTATCTAT 57.594 36.000 0.00 0.00 0.00 1.98
2624 2816 8.968969 AGTGGTTTCGACTTCTTATCTATTACT 58.031 33.333 0.00 0.00 0.00 2.24
2625 2817 9.235537 GTGGTTTCGACTTCTTATCTATTACTC 57.764 37.037 0.00 0.00 0.00 2.59
2628 2820 8.631797 GTTTCGACTTCTTATCTATTACTCCCT 58.368 37.037 0.00 0.00 0.00 4.20
2629 2821 7.982761 TCGACTTCTTATCTATTACTCCCTC 57.017 40.000 0.00 0.00 0.00 4.30
2630 2822 6.941436 TCGACTTCTTATCTATTACTCCCTCC 59.059 42.308 0.00 0.00 0.00 4.30
2631 2823 6.151480 CGACTTCTTATCTATTACTCCCTCCC 59.849 46.154 0.00 0.00 0.00 4.30
2632 2824 7.182017 ACTTCTTATCTATTACTCCCTCCCT 57.818 40.000 0.00 0.00 0.00 4.20
2633 2825 7.243091 ACTTCTTATCTATTACTCCCTCCCTC 58.757 42.308 0.00 0.00 0.00 4.30
2634 2826 6.155247 TCTTATCTATTACTCCCTCCCTCC 57.845 45.833 0.00 0.00 0.00 4.30
2635 2827 5.620021 TCTTATCTATTACTCCCTCCCTCCA 59.380 44.000 0.00 0.00 0.00 3.86
2636 2828 6.280649 TCTTATCTATTACTCCCTCCCTCCAT 59.719 42.308 0.00 0.00 0.00 3.41
2637 2829 4.405756 TCTATTACTCCCTCCCTCCATC 57.594 50.000 0.00 0.00 0.00 3.51
2638 2830 2.424684 ATTACTCCCTCCCTCCATCC 57.575 55.000 0.00 0.00 0.00 3.51
2639 2831 0.267960 TTACTCCCTCCCTCCATCCC 59.732 60.000 0.00 0.00 0.00 3.85
2640 2832 0.633835 TACTCCCTCCCTCCATCCCT 60.634 60.000 0.00 0.00 0.00 4.20
2641 2833 1.152139 CTCCCTCCCTCCATCCCTC 60.152 68.421 0.00 0.00 0.00 4.30
2642 2834 2.122189 CCCTCCCTCCATCCCTCC 60.122 72.222 0.00 0.00 0.00 4.30
2643 2835 2.122189 CCTCCCTCCATCCCTCCC 60.122 72.222 0.00 0.00 0.00 4.30
2644 2836 2.705410 CTCCCTCCATCCCTCCCA 59.295 66.667 0.00 0.00 0.00 4.37
2645 2837 1.004758 CTCCCTCCATCCCTCCCAA 59.995 63.158 0.00 0.00 0.00 4.12
2646 2838 0.624500 CTCCCTCCATCCCTCCCAAA 60.625 60.000 0.00 0.00 0.00 3.28
2647 2839 0.178816 TCCCTCCATCCCTCCCAAAA 60.179 55.000 0.00 0.00 0.00 2.44
2648 2840 0.936691 CCCTCCATCCCTCCCAAAAT 59.063 55.000 0.00 0.00 0.00 1.82
2649 2841 1.291939 CCCTCCATCCCTCCCAAAATT 59.708 52.381 0.00 0.00 0.00 1.82
2650 2842 2.293118 CCCTCCATCCCTCCCAAAATTT 60.293 50.000 0.00 0.00 0.00 1.82
2651 2843 3.052186 CCCTCCATCCCTCCCAAAATTTA 60.052 47.826 0.00 0.00 0.00 1.40
2652 2844 4.573955 CCCTCCATCCCTCCCAAAATTTAA 60.574 45.833 0.00 0.00 0.00 1.52
2653 2845 4.651045 CCTCCATCCCTCCCAAAATTTAAG 59.349 45.833 0.00 0.00 0.00 1.85
2654 2846 5.518865 CTCCATCCCTCCCAAAATTTAAGA 58.481 41.667 0.00 0.00 0.00 2.10
2655 2847 5.269189 TCCATCCCTCCCAAAATTTAAGAC 58.731 41.667 0.00 0.00 0.00 3.01
2656 2848 5.016245 TCCATCCCTCCCAAAATTTAAGACT 59.984 40.000 0.00 0.00 0.00 3.24
2657 2849 5.721480 CCATCCCTCCCAAAATTTAAGACTT 59.279 40.000 0.00 0.00 0.00 3.01
2658 2850 6.213397 CCATCCCTCCCAAAATTTAAGACTTT 59.787 38.462 0.00 0.00 0.00 2.66
2659 2851 7.256655 CCATCCCTCCCAAAATTTAAGACTTTT 60.257 37.037 0.00 0.00 0.00 2.27
2660 2852 7.684317 TCCCTCCCAAAATTTAAGACTTTTT 57.316 32.000 0.00 0.00 0.00 1.94
2694 2886 6.319141 ACTTATTTCAAACAAGGAGCAGAC 57.681 37.500 0.00 0.00 0.00 3.51
2695 2887 6.064717 ACTTATTTCAAACAAGGAGCAGACT 58.935 36.000 0.00 0.00 0.00 3.24
2712 2904 0.108329 ACTCCGGTTGCTATTCCGTG 60.108 55.000 0.00 0.00 44.51 4.94
2731 2923 6.062749 TCCGTGATGAGTATAGCTAGAAGTT 58.937 40.000 0.00 0.00 0.00 2.66
2791 3002 2.918230 AAGGGCGATTTCGTAGGCGG 62.918 60.000 1.55 0.00 42.22 6.13
2807 3018 1.221414 GCGGACAATCATGGTCTAGC 58.779 55.000 0.00 0.00 35.61 3.42
2828 3039 4.399618 AGCAACATGTACTCGTGTCTATCT 59.600 41.667 0.00 0.00 42.20 1.98
2829 3040 4.500837 GCAACATGTACTCGTGTCTATCTG 59.499 45.833 0.00 0.00 42.20 2.90
2833 3044 5.878669 ACATGTACTCGTGTCTATCTGTGTA 59.121 40.000 0.00 0.00 39.28 2.90
2842 3053 2.426024 GTCTATCTGTGTAAGGGCGTGA 59.574 50.000 0.00 0.00 0.00 4.35
2853 3064 1.178534 AGGGCGTGAACAATGGTTGG 61.179 55.000 0.00 0.00 37.36 3.77
2889 3100 6.010294 AGGTATTATCTTACATCCGTCACG 57.990 41.667 0.00 0.00 0.00 4.35
2904 3115 5.886992 TCCGTCACGTAATATATATGGCAG 58.113 41.667 0.00 0.00 0.00 4.85
2910 3121 8.984764 GTCACGTAATATATATGGCAGTGAAAA 58.015 33.333 17.52 3.05 37.75 2.29
2981 3196 8.740906 ACTAGATATGAATACCAATCACCTACG 58.259 37.037 0.00 0.00 0.00 3.51
2982 3197 6.936279 AGATATGAATACCAATCACCTACGG 58.064 40.000 0.00 0.00 0.00 4.02
2983 3198 6.497259 AGATATGAATACCAATCACCTACGGT 59.503 38.462 0.00 0.00 35.62 4.83
2985 3200 5.168647 TGAATACCAATCACCTACGGTTT 57.831 39.130 0.00 0.00 31.02 3.27
2986 3201 4.938832 TGAATACCAATCACCTACGGTTTG 59.061 41.667 0.00 0.00 31.02 2.93
2987 3202 4.829872 ATACCAATCACCTACGGTTTGA 57.170 40.909 0.00 0.00 31.02 2.69
2988 3203 3.713826 ACCAATCACCTACGGTTTGAT 57.286 42.857 0.00 0.00 31.02 2.57
2989 3204 3.343617 ACCAATCACCTACGGTTTGATG 58.656 45.455 0.00 0.00 31.02 3.07
2990 3205 2.682856 CCAATCACCTACGGTTTGATGG 59.317 50.000 0.00 0.00 31.02 3.51
2994 3209 3.929094 TCACCTACGGTTTGATGGTTAC 58.071 45.455 0.00 0.00 31.02 2.50
3009 3224 1.669795 GGTTACGAGGGTGGTTGTACG 60.670 57.143 0.00 0.00 0.00 3.67
3013 3228 2.918802 AGGGTGGTTGTACGCCGA 60.919 61.111 0.00 0.00 41.95 5.54
3014 3229 2.739671 GGGTGGTTGTACGCCGAC 60.740 66.667 0.00 2.51 41.95 4.79
3023 3238 0.172578 TGTACGCCGACTCATCAAGG 59.827 55.000 0.00 0.00 0.00 3.61
3024 3239 0.454600 GTACGCCGACTCATCAAGGA 59.545 55.000 0.00 0.00 0.00 3.36
3027 3242 0.387202 CGCCGACTCATCAAGGATCT 59.613 55.000 0.00 0.00 0.00 2.75
3028 3243 1.202463 CGCCGACTCATCAAGGATCTT 60.202 52.381 0.00 0.00 0.00 2.40
3029 3244 2.208431 GCCGACTCATCAAGGATCTTG 58.792 52.381 1.53 1.53 0.00 3.02
3030 3245 2.419297 GCCGACTCATCAAGGATCTTGT 60.419 50.000 7.42 0.00 0.00 3.16
3031 3246 3.452474 CCGACTCATCAAGGATCTTGTC 58.548 50.000 7.42 0.00 0.00 3.18
3032 3247 3.118992 CCGACTCATCAAGGATCTTGTCA 60.119 47.826 7.42 0.00 0.00 3.58
3033 3248 3.862267 CGACTCATCAAGGATCTTGTCAC 59.138 47.826 7.42 0.00 0.00 3.67
3038 3266 6.070596 ACTCATCAAGGATCTTGTCACATGTA 60.071 38.462 0.00 0.00 0.00 2.29
3048 3276 7.168302 GGATCTTGTCACATGTATCTCGTAAAG 59.832 40.741 0.00 0.00 0.00 1.85
3049 3277 7.153217 TCTTGTCACATGTATCTCGTAAAGA 57.847 36.000 0.00 0.00 38.72 2.52
3050 3278 7.027760 TCTTGTCACATGTATCTCGTAAAGAC 58.972 38.462 0.00 0.00 36.65 3.01
3051 3279 5.647589 TGTCACATGTATCTCGTAAAGACC 58.352 41.667 0.00 0.00 36.65 3.85
3052 3280 5.184287 TGTCACATGTATCTCGTAAAGACCA 59.816 40.000 0.00 0.00 36.65 4.02
3064 3292 8.610248 TCTCGTAAAGACCAAATATTGTTTCA 57.390 30.769 0.00 0.00 0.00 2.69
3065 3293 9.058174 TCTCGTAAAGACCAAATATTGTTTCAA 57.942 29.630 0.00 0.00 0.00 2.69
3075 3303 9.787532 ACCAAATATTGTTTCAAATCTATGACG 57.212 29.630 0.00 0.00 0.00 4.35
3081 3309 7.905604 TTGTTTCAAATCTATGACGATGACT 57.094 32.000 0.00 0.00 0.00 3.41
3082 3310 7.905604 TGTTTCAAATCTATGACGATGACTT 57.094 32.000 0.00 0.00 0.00 3.01
3083 3311 7.963981 TGTTTCAAATCTATGACGATGACTTC 58.036 34.615 0.00 0.00 0.00 3.01
3084 3312 7.602265 TGTTTCAAATCTATGACGATGACTTCA 59.398 33.333 0.00 0.00 0.00 3.02
3085 3313 8.607459 GTTTCAAATCTATGACGATGACTTCAT 58.393 33.333 0.00 0.00 38.32 2.57
3086 3314 8.722480 TTCAAATCTATGACGATGACTTCATT 57.278 30.769 0.00 0.00 36.60 2.57
3087 3315 9.816354 TTCAAATCTATGACGATGACTTCATTA 57.184 29.630 0.00 0.00 36.60 1.90
3088 3316 9.816354 TCAAATCTATGACGATGACTTCATTAA 57.184 29.630 0.00 0.00 36.60 1.40
3092 3320 9.853555 ATCTATGACGATGACTTCATTAATCTC 57.146 33.333 0.00 0.00 36.60 2.75
3093 3321 8.850156 TCTATGACGATGACTTCATTAATCTCA 58.150 33.333 0.00 0.00 36.60 3.27
3094 3322 9.468532 CTATGACGATGACTTCATTAATCTCAA 57.531 33.333 0.00 0.00 36.60 3.02
3095 3323 7.761651 TGACGATGACTTCATTAATCTCAAG 57.238 36.000 0.00 0.00 36.57 3.02
3096 3324 7.547227 TGACGATGACTTCATTAATCTCAAGA 58.453 34.615 0.00 0.00 36.57 3.02
3097 3325 7.489435 TGACGATGACTTCATTAATCTCAAGAC 59.511 37.037 0.00 1.58 36.57 3.01
3098 3326 7.551585 ACGATGACTTCATTAATCTCAAGACT 58.448 34.615 0.00 0.00 36.57 3.24
3099 3327 8.037758 ACGATGACTTCATTAATCTCAAGACTT 58.962 33.333 0.00 0.00 36.57 3.01
3100 3328 8.326713 CGATGACTTCATTAATCTCAAGACTTG 58.673 37.037 9.03 9.03 36.57 3.16
3101 3329 9.160496 GATGACTTCATTAATCTCAAGACTTGT 57.840 33.333 14.75 0.00 36.57 3.16
3102 3330 8.539770 TGACTTCATTAATCTCAAGACTTGTC 57.460 34.615 14.75 1.53 0.00 3.18
3103 3331 8.150296 TGACTTCATTAATCTCAAGACTTGTCA 58.850 33.333 14.75 4.01 0.00 3.58
3104 3332 8.908786 ACTTCATTAATCTCAAGACTTGTCAA 57.091 30.769 14.75 2.72 0.00 3.18
3105 3333 8.778358 ACTTCATTAATCTCAAGACTTGTCAAC 58.222 33.333 14.75 0.00 0.00 3.18
3106 3334 8.908786 TTCATTAATCTCAAGACTTGTCAACT 57.091 30.769 14.75 0.94 0.00 3.16
3107 3335 8.539770 TCATTAATCTCAAGACTTGTCAACTC 57.460 34.615 14.75 0.00 0.00 3.01
3108 3336 8.150296 TCATTAATCTCAAGACTTGTCAACTCA 58.850 33.333 14.75 0.00 0.00 3.41
3109 3337 7.953158 TTAATCTCAAGACTTGTCAACTCAG 57.047 36.000 14.75 3.59 0.00 3.35
3110 3338 5.543507 ATCTCAAGACTTGTCAACTCAGT 57.456 39.130 14.75 0.00 0.00 3.41
3111 3339 4.938080 TCTCAAGACTTGTCAACTCAGTC 58.062 43.478 14.75 5.42 0.00 3.51
3112 3340 4.646945 TCTCAAGACTTGTCAACTCAGTCT 59.353 41.667 14.75 8.80 41.03 3.24
3113 3341 5.127845 TCTCAAGACTTGTCAACTCAGTCTT 59.872 40.000 14.75 16.35 46.71 3.01
3115 3343 5.344743 AAGACTTGTCAACTCAGTCTTGA 57.655 39.130 19.20 0.00 44.85 3.02
3116 3344 5.344743 AGACTTGTCAACTCAGTCTTGAA 57.655 39.130 3.49 0.00 36.57 2.69
3117 3345 5.734720 AGACTTGTCAACTCAGTCTTGAAA 58.265 37.500 3.49 0.00 36.57 2.69
3118 3346 6.173339 AGACTTGTCAACTCAGTCTTGAAAA 58.827 36.000 3.49 0.00 36.57 2.29
3119 3347 6.825721 AGACTTGTCAACTCAGTCTTGAAAAT 59.174 34.615 3.49 0.00 36.57 1.82
3120 3348 7.987458 AGACTTGTCAACTCAGTCTTGAAAATA 59.013 33.333 3.49 0.00 36.57 1.40
3121 3349 7.920738 ACTTGTCAACTCAGTCTTGAAAATAC 58.079 34.615 0.00 0.00 31.69 1.89
3122 3350 7.770897 ACTTGTCAACTCAGTCTTGAAAATACT 59.229 33.333 0.00 0.00 33.05 2.12
3123 3351 7.715265 TGTCAACTCAGTCTTGAAAATACTC 57.285 36.000 0.00 0.00 30.05 2.59
3124 3352 7.272244 TGTCAACTCAGTCTTGAAAATACTCA 58.728 34.615 0.00 0.00 30.05 3.41
3125 3353 7.933577 TGTCAACTCAGTCTTGAAAATACTCAT 59.066 33.333 0.00 0.00 30.05 2.90
3126 3354 9.424319 GTCAACTCAGTCTTGAAAATACTCATA 57.576 33.333 0.00 0.00 30.05 2.15
3127 3355 9.645059 TCAACTCAGTCTTGAAAATACTCATAG 57.355 33.333 0.00 0.00 30.05 2.23
3128 3356 9.645059 CAACTCAGTCTTGAAAATACTCATAGA 57.355 33.333 0.00 0.00 30.05 1.98
3129 3357 9.868277 AACTCAGTCTTGAAAATACTCATAGAG 57.132 33.333 0.00 0.00 30.05 2.43
3130 3358 9.249053 ACTCAGTCTTGAAAATACTCATAGAGA 57.751 33.333 0.31 0.00 30.05 3.10
3172 3400 5.745227 AGGATATTTGACGGTGACTTCATT 58.255 37.500 0.00 0.00 38.53 2.57
3176 3404 8.283291 GGATATTTGACGGTGACTTCATTAATC 58.717 37.037 0.00 0.00 38.53 1.75
3185 3413 6.591834 CGGTGACTTCATTAATCTCAAGACTT 59.408 38.462 5.65 0.00 0.00 3.01
3189 3417 8.150296 TGACTTCATTAATCTCAAGACTTGTCA 58.850 33.333 14.75 4.01 0.00 3.58
3193 3421 8.539770 TCATTAATCTCAAGACTTGTCAACTC 57.460 34.615 14.75 0.00 0.00 3.01
3194 3422 8.150296 TCATTAATCTCAAGACTTGTCAACTCA 58.850 33.333 14.75 0.00 0.00 3.41
3195 3423 7.953158 TTAATCTCAAGACTTGTCAACTCAG 57.047 36.000 14.75 3.59 0.00 3.35
3196 3424 5.543507 ATCTCAAGACTTGTCAACTCAGT 57.456 39.130 14.75 0.00 0.00 3.41
3197 3425 4.938080 TCTCAAGACTTGTCAACTCAGTC 58.062 43.478 14.75 5.42 0.00 3.51
3198 3426 3.706698 TCAAGACTTGTCAACTCAGTCG 58.293 45.455 14.75 0.00 34.97 4.18
3199 3427 3.130516 TCAAGACTTGTCAACTCAGTCGT 59.869 43.478 14.75 3.08 34.97 4.34
3200 3428 3.802948 AGACTTGTCAACTCAGTCGTT 57.197 42.857 3.49 0.00 34.97 3.85
3201 3429 4.124851 AGACTTGTCAACTCAGTCGTTT 57.875 40.909 3.49 0.00 34.97 3.60
3202 3430 4.504858 AGACTTGTCAACTCAGTCGTTTT 58.495 39.130 3.49 0.00 34.97 2.43
3203 3431 4.935808 AGACTTGTCAACTCAGTCGTTTTT 59.064 37.500 3.49 0.00 34.97 1.94
3233 3461 9.821240 AAGGATTAGTGTATGACTCATAGAGAT 57.179 33.333 0.00 0.00 35.96 2.75
3240 3468 9.806448 AGTGTATGACTCATAGAGATAGAATGT 57.194 33.333 0.00 0.00 33.32 2.71
3241 3469 9.838975 GTGTATGACTCATAGAGATAGAATGTG 57.161 37.037 0.00 0.00 33.32 3.21
3242 3470 9.579932 TGTATGACTCATAGAGATAGAATGTGT 57.420 33.333 0.00 0.00 33.32 3.72
3269 3497 9.675464 TTTTTATAAGGATATTTGACGGTGACT 57.325 29.630 0.00 0.00 0.00 3.41
3270 3498 9.675464 TTTTATAAGGATATTTGACGGTGACTT 57.325 29.630 0.00 0.00 0.00 3.01
3271 3499 8.882415 TTATAAGGATATTTGACGGTGACTTC 57.118 34.615 0.00 0.00 0.00 3.01
3272 3500 4.819105 AGGATATTTGACGGTGACTTCA 57.181 40.909 0.00 0.00 36.74 3.02
3273 3501 5.359194 AGGATATTTGACGGTGACTTCAT 57.641 39.130 0.00 0.00 38.53 2.57
3274 3502 5.745227 AGGATATTTGACGGTGACTTCATT 58.255 37.500 0.00 0.00 38.53 2.57
3275 3503 6.884832 AGGATATTTGACGGTGACTTCATTA 58.115 36.000 0.00 0.00 38.53 1.90
3276 3504 7.335627 AGGATATTTGACGGTGACTTCATTAA 58.664 34.615 0.00 0.00 38.53 1.40
3277 3505 7.993183 AGGATATTTGACGGTGACTTCATTAAT 59.007 33.333 0.00 0.00 38.53 1.40
3278 3506 8.283291 GGATATTTGACGGTGACTTCATTAATC 58.717 37.037 0.00 0.00 38.53 1.75
3279 3507 8.964476 ATATTTGACGGTGACTTCATTAATCT 57.036 30.769 0.00 0.00 38.53 2.40
3280 3508 6.721571 TTTGACGGTGACTTCATTAATCTC 57.278 37.500 0.00 0.00 38.53 2.75
3281 3509 5.400066 TGACGGTGACTTCATTAATCTCA 57.600 39.130 0.00 0.00 33.08 3.27
3282 3510 5.789521 TGACGGTGACTTCATTAATCTCAA 58.210 37.500 0.00 0.00 33.08 3.02
3283 3511 5.869344 TGACGGTGACTTCATTAATCTCAAG 59.131 40.000 0.00 0.00 33.08 3.02
3284 3512 6.037786 ACGGTGACTTCATTAATCTCAAGA 57.962 37.500 5.65 0.00 0.00 3.02
3285 3513 5.869888 ACGGTGACTTCATTAATCTCAAGAC 59.130 40.000 5.65 1.58 0.00 3.01
3286 3514 6.102663 CGGTGACTTCATTAATCTCAAGACT 58.897 40.000 5.65 0.00 0.00 3.24
3287 3515 6.591834 CGGTGACTTCATTAATCTCAAGACTT 59.408 38.462 5.65 0.00 0.00 3.01
3288 3516 7.412346 CGGTGACTTCATTAATCTCAAGACTTG 60.412 40.741 9.03 9.03 0.00 3.16
3289 3517 7.389053 GGTGACTTCATTAATCTCAAGACTTGT 59.611 37.037 14.75 0.00 0.00 3.16
3290 3518 8.439286 GTGACTTCATTAATCTCAAGACTTGTC 58.561 37.037 14.75 1.53 0.00 3.18
3291 3519 8.150296 TGACTTCATTAATCTCAAGACTTGTCA 58.850 33.333 14.75 4.01 0.00 3.58
3292 3520 8.908786 ACTTCATTAATCTCAAGACTTGTCAA 57.091 30.769 14.75 2.72 0.00 3.18
3293 3521 8.778358 ACTTCATTAATCTCAAGACTTGTCAAC 58.222 33.333 14.75 0.00 0.00 3.18
3294 3522 8.908786 TTCATTAATCTCAAGACTTGTCAACT 57.091 30.769 14.75 0.94 0.00 3.16
3295 3523 8.539770 TCATTAATCTCAAGACTTGTCAACTC 57.460 34.615 14.75 0.00 0.00 3.01
3296 3524 8.150296 TCATTAATCTCAAGACTTGTCAACTCA 58.850 33.333 14.75 0.00 0.00 3.41
3297 3525 7.953158 TTAATCTCAAGACTTGTCAACTCAG 57.047 36.000 14.75 3.59 0.00 3.35
3298 3526 5.543507 ATCTCAAGACTTGTCAACTCAGT 57.456 39.130 14.75 0.00 0.00 3.41
3299 3527 4.938080 TCTCAAGACTTGTCAACTCAGTC 58.062 43.478 14.75 5.42 0.00 3.51
3300 3528 3.706698 TCAAGACTTGTCAACTCAGTCG 58.293 45.455 14.75 0.00 34.97 4.18
3301 3529 3.130516 TCAAGACTTGTCAACTCAGTCGT 59.869 43.478 14.75 3.08 34.97 4.34
3302 3530 3.802948 AGACTTGTCAACTCAGTCGTT 57.197 42.857 3.49 0.00 34.97 3.85
3303 3531 4.124851 AGACTTGTCAACTCAGTCGTTT 57.875 40.909 3.49 0.00 34.97 3.60
3304 3532 4.504858 AGACTTGTCAACTCAGTCGTTTT 58.495 39.130 3.49 0.00 34.97 2.43
3305 3533 4.935808 AGACTTGTCAACTCAGTCGTTTTT 59.064 37.500 3.49 0.00 34.97 1.94
3328 3556 8.951787 TTTTATAAGGATTAGTGTATGTGCGT 57.048 30.769 0.00 0.00 31.76 5.24
3329 3557 7.940178 TTATAAGGATTAGTGTATGTGCGTG 57.060 36.000 0.00 0.00 31.76 5.34
3330 3558 3.887621 AGGATTAGTGTATGTGCGTGT 57.112 42.857 0.00 0.00 0.00 4.49
3331 3559 4.994907 AGGATTAGTGTATGTGCGTGTA 57.005 40.909 0.00 0.00 0.00 2.90
3332 3560 5.531122 AGGATTAGTGTATGTGCGTGTAT 57.469 39.130 0.00 0.00 0.00 2.29
3333 3561 5.289595 AGGATTAGTGTATGTGCGTGTATG 58.710 41.667 0.00 0.00 0.00 2.39
3334 3562 4.084537 GGATTAGTGTATGTGCGTGTATGC 60.085 45.833 0.00 0.00 0.00 3.14
3335 3563 2.672961 AGTGTATGTGCGTGTATGCT 57.327 45.000 0.00 0.00 35.36 3.79
3336 3564 3.793797 AGTGTATGTGCGTGTATGCTA 57.206 42.857 0.00 0.00 35.36 3.49
3337 3565 3.706698 AGTGTATGTGCGTGTATGCTAG 58.293 45.455 0.00 0.00 35.36 3.42
3338 3566 2.218759 GTGTATGTGCGTGTATGCTAGC 59.781 50.000 8.10 8.10 35.36 3.42
3339 3567 1.452025 GTATGTGCGTGTATGCTAGCG 59.548 52.381 10.77 0.00 35.36 4.26
3340 3568 0.179111 ATGTGCGTGTATGCTAGCGT 60.179 50.000 15.08 15.08 35.36 5.07
3341 3569 0.389296 TGTGCGTGTATGCTAGCGTT 60.389 50.000 16.03 4.88 35.36 4.84
3342 3570 0.719465 GTGCGTGTATGCTAGCGTTT 59.281 50.000 16.03 2.07 35.36 3.60
3343 3571 0.718904 TGCGTGTATGCTAGCGTTTG 59.281 50.000 16.03 4.05 35.36 2.93
3344 3572 0.719465 GCGTGTATGCTAGCGTTTGT 59.281 50.000 16.03 0.00 0.00 2.83
3345 3573 1.921887 GCGTGTATGCTAGCGTTTGTA 59.078 47.619 16.03 0.00 0.00 2.41
3346 3574 2.284855 GCGTGTATGCTAGCGTTTGTAC 60.285 50.000 16.03 7.69 0.00 2.90
3347 3575 3.176708 CGTGTATGCTAGCGTTTGTACT 58.823 45.455 16.03 0.00 0.00 2.73
3348 3576 4.345288 CGTGTATGCTAGCGTTTGTACTA 58.655 43.478 16.03 0.00 0.00 1.82
3349 3577 4.974275 CGTGTATGCTAGCGTTTGTACTAT 59.026 41.667 16.03 0.00 0.00 2.12
3350 3578 5.108368 CGTGTATGCTAGCGTTTGTACTATG 60.108 44.000 16.03 0.83 0.00 2.23
3351 3579 4.743151 TGTATGCTAGCGTTTGTACTATGC 59.257 41.667 16.03 0.92 0.00 3.14
3352 3580 3.520290 TGCTAGCGTTTGTACTATGCT 57.480 42.857 10.77 16.08 40.72 3.79
3353 3581 3.857052 TGCTAGCGTTTGTACTATGCTT 58.143 40.909 16.74 5.70 38.69 3.91
3354 3582 3.863424 TGCTAGCGTTTGTACTATGCTTC 59.137 43.478 16.74 11.42 38.69 3.86
3355 3583 4.113354 GCTAGCGTTTGTACTATGCTTCT 58.887 43.478 16.74 1.27 38.69 2.85
3356 3584 5.163591 TGCTAGCGTTTGTACTATGCTTCTA 60.164 40.000 16.74 3.32 38.69 2.10
3357 3585 5.747197 GCTAGCGTTTGTACTATGCTTCTAA 59.253 40.000 16.74 3.05 38.69 2.10
3358 3586 6.255020 GCTAGCGTTTGTACTATGCTTCTAAA 59.745 38.462 16.74 2.77 38.69 1.85
3359 3587 7.201496 GCTAGCGTTTGTACTATGCTTCTAAAA 60.201 37.037 16.74 2.23 38.69 1.52
3360 3588 7.061752 AGCGTTTGTACTATGCTTCTAAAAG 57.938 36.000 8.80 0.00 34.28 2.27
3361 3589 6.872020 AGCGTTTGTACTATGCTTCTAAAAGA 59.128 34.615 8.80 0.00 34.28 2.52
3362 3590 7.386848 AGCGTTTGTACTATGCTTCTAAAAGAA 59.613 33.333 8.80 0.00 34.28 2.52
3363 3591 8.013378 GCGTTTGTACTATGCTTCTAAAAGAAA 58.987 33.333 0.00 0.00 33.19 2.52
3364 3592 9.872757 CGTTTGTACTATGCTTCTAAAAGAAAA 57.127 29.630 0.00 0.00 33.19 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 45 4.844085 TCCCATGTTCTAAGTCTTCCTTGA 59.156 41.667 0.00 0.00 34.46 3.02
53 57 2.159085 GGTCCGTCTCCCATGTTCTAAG 60.159 54.545 0.00 0.00 0.00 2.18
54 58 1.829222 GGTCCGTCTCCCATGTTCTAA 59.171 52.381 0.00 0.00 0.00 2.10
82 86 1.037579 GGCAAGGCCTTATGTCCCAC 61.038 60.000 20.00 0.23 46.69 4.61
114 119 3.245984 TGGACTCCTCCAAGGATGAGTAA 60.246 47.826 21.87 13.37 44.81 2.24
152 157 0.036105 TGTAGACCTCGCGTCCACTA 60.036 55.000 5.77 3.96 43.08 2.74
161 166 3.623060 CACCATTTCCATTGTAGACCTCG 59.377 47.826 0.00 0.00 0.00 4.63
168 173 0.814457 GCGCCACCATTTCCATTGTA 59.186 50.000 0.00 0.00 0.00 2.41
195 201 2.022129 GTCCCAGTGCGACAACGAG 61.022 63.158 2.98 0.00 42.66 4.18
200 209 4.357947 GAGCGTCCCAGTGCGACA 62.358 66.667 8.58 0.00 35.87 4.35
233 244 4.436998 GCTGCGCCTCCTACACGT 62.437 66.667 4.18 0.00 0.00 4.49
291 302 4.545706 CAGGAAGCGGCCGCCATA 62.546 66.667 44.47 0.00 43.17 2.74
350 380 3.706373 ATGGCCGCGGTGAACTCT 61.706 61.111 28.70 1.64 0.00 3.24
430 460 5.337330 CGGTACAACCTGTTTCTCCTAGAAT 60.337 44.000 0.00 0.00 35.66 2.40
440 470 5.358725 AGAAAAACATCGGTACAACCTGTTT 59.641 36.000 9.46 9.46 40.65 2.83
461 493 2.112928 TTCCAGCAGGCGCAAGAA 59.887 55.556 10.83 0.00 42.27 2.52
541 573 1.382522 CGGATTTACCATGCAGCAGT 58.617 50.000 0.00 0.00 38.90 4.40
547 579 3.871775 CATGCCGGATTTACCATGC 57.128 52.632 5.05 0.00 38.90 4.06
554 586 1.405797 CCATTTGTGCATGCCGGATTT 60.406 47.619 16.68 0.00 0.00 2.17
557 589 2.349672 CCCATTTGTGCATGCCGGA 61.350 57.895 16.68 0.00 0.00 5.14
582 617 4.065281 GTCCTACGGCACCGCACT 62.065 66.667 9.43 0.00 44.19 4.40
591 626 1.455217 ATGGAGACGGGTCCTACGG 60.455 63.158 6.84 0.00 37.52 4.02
621 657 0.516001 CGAAGTCTCCAACGACGAGA 59.484 55.000 0.00 0.00 38.90 4.04
630 666 0.039180 TAGCTCCACCGAAGTCTCCA 59.961 55.000 0.00 0.00 0.00 3.86
642 678 2.763710 TCATGCCGGCTAGCTCCA 60.764 61.111 29.70 5.17 0.00 3.86
649 685 0.541392 TAGTTCATGTCATGCCGGCT 59.459 50.000 29.70 10.60 0.00 5.52
659 695 6.595682 CCTGGAGGACATTATTAGTTCATGT 58.404 40.000 0.00 0.00 37.39 3.21
660 696 5.471456 GCCTGGAGGACATTATTAGTTCATG 59.529 44.000 0.00 0.00 37.39 3.07
661 697 5.456763 GGCCTGGAGGACATTATTAGTTCAT 60.457 44.000 0.00 0.00 44.76 2.57
662 698 4.141482 GGCCTGGAGGACATTATTAGTTCA 60.141 45.833 0.00 0.00 44.76 3.18
663 699 4.390264 GGCCTGGAGGACATTATTAGTTC 58.610 47.826 0.00 0.00 44.76 3.01
664 700 3.181454 CGGCCTGGAGGACATTATTAGTT 60.181 47.826 0.00 0.00 46.09 2.24
665 701 2.368875 CGGCCTGGAGGACATTATTAGT 59.631 50.000 0.00 0.00 46.09 2.24
666 702 2.632996 TCGGCCTGGAGGACATTATTAG 59.367 50.000 0.00 0.00 46.09 1.73
667 703 2.684943 TCGGCCTGGAGGACATTATTA 58.315 47.619 0.00 0.00 46.09 0.98
668 704 1.507140 TCGGCCTGGAGGACATTATT 58.493 50.000 0.00 0.00 46.09 1.40
669 705 1.625818 GATCGGCCTGGAGGACATTAT 59.374 52.381 0.00 0.00 46.09 1.28
670 706 1.048601 GATCGGCCTGGAGGACATTA 58.951 55.000 0.00 0.00 46.09 1.90
671 707 1.700042 GGATCGGCCTGGAGGACATT 61.700 60.000 0.00 0.00 46.09 2.71
672 708 2.143419 GGATCGGCCTGGAGGACAT 61.143 63.158 0.00 0.00 46.09 3.06
673 709 2.764128 GGATCGGCCTGGAGGACA 60.764 66.667 0.00 0.00 46.09 4.02
674 710 2.317149 CTTGGATCGGCCTGGAGGAC 62.317 65.000 0.00 0.00 40.84 3.85
675 711 2.040442 TTGGATCGGCCTGGAGGA 59.960 61.111 0.00 0.00 37.39 3.71
676 712 1.414061 ATCTTGGATCGGCCTGGAGG 61.414 60.000 0.00 0.00 37.63 4.30
677 713 0.034616 GATCTTGGATCGGCCTGGAG 59.965 60.000 0.00 0.00 37.63 3.86
678 714 0.399091 AGATCTTGGATCGGCCTGGA 60.399 55.000 0.00 0.00 37.63 3.86
679 715 0.034616 GAGATCTTGGATCGGCCTGG 59.965 60.000 0.00 0.00 37.63 4.45
680 716 1.000731 GAGAGATCTTGGATCGGCCTG 59.999 57.143 0.00 0.00 37.63 4.85
681 717 1.337118 GAGAGATCTTGGATCGGCCT 58.663 55.000 0.00 0.00 37.63 5.19
682 718 1.043816 TGAGAGATCTTGGATCGGCC 58.956 55.000 0.00 0.00 37.10 6.13
683 719 2.898729 TTGAGAGATCTTGGATCGGC 57.101 50.000 0.00 0.24 0.00 5.54
684 720 5.238214 GGAAATTTGAGAGATCTTGGATCGG 59.762 44.000 0.00 0.00 0.00 4.18
685 721 6.054295 AGGAAATTTGAGAGATCTTGGATCG 58.946 40.000 0.00 0.00 0.00 3.69
686 722 7.878547 AAGGAAATTTGAGAGATCTTGGATC 57.121 36.000 0.00 0.00 0.00 3.36
705 741 9.748708 CTTTTCAGATGTAAACAATCAAAGGAA 57.251 29.630 0.00 0.00 0.00 3.36
706 742 7.867403 GCTTTTCAGATGTAAACAATCAAAGGA 59.133 33.333 0.00 0.00 0.00 3.36
707 743 7.652909 TGCTTTTCAGATGTAAACAATCAAAGG 59.347 33.333 0.00 0.00 0.00 3.11
708 744 8.578308 TGCTTTTCAGATGTAAACAATCAAAG 57.422 30.769 0.00 0.00 0.00 2.77
709 745 7.652909 CCTGCTTTTCAGATGTAAACAATCAAA 59.347 33.333 0.00 0.00 45.72 2.69
710 746 7.147312 CCTGCTTTTCAGATGTAAACAATCAA 58.853 34.615 0.00 0.00 45.72 2.57
711 747 6.265196 ACCTGCTTTTCAGATGTAAACAATCA 59.735 34.615 0.00 0.00 45.72 2.57
712 748 6.583806 CACCTGCTTTTCAGATGTAAACAATC 59.416 38.462 0.00 0.00 45.72 2.67
713 749 6.265196 TCACCTGCTTTTCAGATGTAAACAAT 59.735 34.615 0.00 0.00 45.72 2.71
714 750 5.592282 TCACCTGCTTTTCAGATGTAAACAA 59.408 36.000 0.00 0.00 45.72 2.83
715 751 5.129634 TCACCTGCTTTTCAGATGTAAACA 58.870 37.500 0.00 0.00 45.72 2.83
716 752 5.689383 TCACCTGCTTTTCAGATGTAAAC 57.311 39.130 0.00 0.00 45.72 2.01
717 753 5.827797 AGTTCACCTGCTTTTCAGATGTAAA 59.172 36.000 0.00 0.00 45.72 2.01
718 754 5.376625 AGTTCACCTGCTTTTCAGATGTAA 58.623 37.500 0.00 0.00 45.72 2.41
719 755 4.973168 AGTTCACCTGCTTTTCAGATGTA 58.027 39.130 0.00 0.00 45.72 2.29
720 756 3.825328 AGTTCACCTGCTTTTCAGATGT 58.175 40.909 0.00 0.00 45.72 3.06
721 757 4.843220 AAGTTCACCTGCTTTTCAGATG 57.157 40.909 0.00 0.00 45.72 2.90
722 758 4.646492 ACAAAGTTCACCTGCTTTTCAGAT 59.354 37.500 0.00 0.00 45.72 2.90
723 759 4.016444 ACAAAGTTCACCTGCTTTTCAGA 58.984 39.130 0.00 0.00 45.72 3.27
724 760 4.376340 ACAAAGTTCACCTGCTTTTCAG 57.624 40.909 0.00 0.00 42.49 3.02
725 761 4.947388 AGTACAAAGTTCACCTGCTTTTCA 59.053 37.500 0.00 0.00 33.19 2.69
726 762 5.500645 AGTACAAAGTTCACCTGCTTTTC 57.499 39.130 0.00 0.00 33.19 2.29
727 763 6.120220 ACTAGTACAAAGTTCACCTGCTTTT 58.880 36.000 0.00 0.00 33.19 2.27
728 764 5.681639 ACTAGTACAAAGTTCACCTGCTTT 58.318 37.500 0.00 0.00 35.55 3.51
729 765 5.291905 ACTAGTACAAAGTTCACCTGCTT 57.708 39.130 0.00 0.00 0.00 3.91
730 766 4.957684 ACTAGTACAAAGTTCACCTGCT 57.042 40.909 0.00 0.00 0.00 4.24
731 767 5.535333 TGTACTAGTACAAAGTTCACCTGC 58.465 41.667 29.20 2.29 42.49 4.85
732 768 6.157211 CCTGTACTAGTACAAAGTTCACCTG 58.843 44.000 30.31 17.23 44.47 4.00
733 769 5.837438 ACCTGTACTAGTACAAAGTTCACCT 59.163 40.000 30.31 10.11 44.47 4.00
734 770 6.094193 ACCTGTACTAGTACAAAGTTCACC 57.906 41.667 30.31 5.24 44.47 4.02
750 786 2.550208 CCAAGTCAGTCCCAACCTGTAC 60.550 54.545 0.00 0.00 0.00 2.90
752 788 0.474184 CCAAGTCAGTCCCAACCTGT 59.526 55.000 0.00 0.00 0.00 4.00
754 790 1.456287 GCCAAGTCAGTCCCAACCT 59.544 57.895 0.00 0.00 0.00 3.50
821 883 4.129148 GGCCCCCATGTCCTGGTC 62.129 72.222 0.00 0.00 44.30 4.02
925 987 0.599991 CACAGTGAACGCTGGCTGTA 60.600 55.000 17.58 0.00 39.82 2.74
961 1046 2.754658 GTTCCTCGGGAGCGGAGA 60.755 66.667 0.00 0.00 45.75 3.71
1113 1201 3.745803 ACGACGAGGAACCTCCGC 61.746 66.667 14.25 6.45 42.75 5.54
1203 1291 0.321919 GCACTGGCACCAGAATCTCA 60.322 55.000 23.30 0.00 46.30 3.27
1206 1294 1.001641 AGGCACTGGCACCAGAATC 60.002 57.895 23.30 10.89 46.30 2.52
1270 1358 3.116300 CCGACAGATTTCGTATGTGAGG 58.884 50.000 4.88 4.41 37.29 3.86
1282 1375 2.813908 GCGCCGAACCGACAGATT 60.814 61.111 0.00 0.00 0.00 2.40
1286 1379 3.982372 GATCTGCGCCGAACCGACA 62.982 63.158 5.38 0.00 0.00 4.35
1317 1410 1.450848 AGGCGACGTCGTCCTCATA 60.451 57.895 36.27 0.00 46.54 2.15
1421 1514 2.746803 GGCATGTTCCCGTACGCAC 61.747 63.158 10.49 6.64 0.00 5.34
1422 1515 2.435234 GGCATGTTCCCGTACGCA 60.435 61.111 10.49 2.35 0.00 5.24
1423 1516 2.435234 TGGCATGTTCCCGTACGC 60.435 61.111 10.49 0.00 0.00 4.42
1425 1518 1.240256 TTTGTGGCATGTTCCCGTAC 58.760 50.000 0.00 0.00 0.00 3.67
1426 1519 1.982660 TTTTGTGGCATGTTCCCGTA 58.017 45.000 0.00 0.00 0.00 4.02
1427 1520 1.115467 TTTTTGTGGCATGTTCCCGT 58.885 45.000 0.00 0.00 0.00 5.28
1428 1521 2.029110 AGATTTTTGTGGCATGTTCCCG 60.029 45.455 0.00 0.00 0.00 5.14
1430 1523 3.244181 ACCAGATTTTTGTGGCATGTTCC 60.244 43.478 0.00 0.00 37.34 3.62
1431 1524 3.742369 CACCAGATTTTTGTGGCATGTTC 59.258 43.478 0.00 0.00 37.34 3.18
1432 1525 3.731089 CACCAGATTTTTGTGGCATGTT 58.269 40.909 0.00 0.00 37.34 2.71
1435 1528 1.337074 CGCACCAGATTTTTGTGGCAT 60.337 47.619 0.00 0.00 37.34 4.40
1436 1529 0.031857 CGCACCAGATTTTTGTGGCA 59.968 50.000 0.00 0.00 37.34 4.92
1437 1530 0.313672 TCGCACCAGATTTTTGTGGC 59.686 50.000 0.00 0.00 37.34 5.01
1438 1531 3.302365 AATCGCACCAGATTTTTGTGG 57.698 42.857 0.00 0.00 37.56 4.17
1468 1561 1.544724 CTTGGCCGGATTCCTCAAAA 58.455 50.000 5.05 0.00 0.00 2.44
1469 1562 0.323360 CCTTGGCCGGATTCCTCAAA 60.323 55.000 5.05 0.00 0.00 2.69
1470 1563 1.302949 CCTTGGCCGGATTCCTCAA 59.697 57.895 5.05 2.58 0.00 3.02
1471 1564 0.619255 TACCTTGGCCGGATTCCTCA 60.619 55.000 5.05 0.00 0.00 3.86
1472 1565 0.765510 ATACCTTGGCCGGATTCCTC 59.234 55.000 5.05 0.00 0.00 3.71
1473 1566 1.222567 AATACCTTGGCCGGATTCCT 58.777 50.000 5.05 0.00 0.00 3.36
1474 1567 2.067365 AAATACCTTGGCCGGATTCC 57.933 50.000 5.05 0.00 0.00 3.01
1475 1568 3.020984 TCAAAATACCTTGGCCGGATTC 58.979 45.455 5.05 0.00 0.00 2.52
1476 1569 2.758423 GTCAAAATACCTTGGCCGGATT 59.242 45.455 5.05 0.00 0.00 3.01
1477 1570 2.025321 AGTCAAAATACCTTGGCCGGAT 60.025 45.455 5.05 0.00 30.95 4.18
1478 1571 1.353022 AGTCAAAATACCTTGGCCGGA 59.647 47.619 5.05 0.00 30.95 5.14
1479 1572 1.472480 CAGTCAAAATACCTTGGCCGG 59.528 52.381 0.00 0.00 30.95 6.13
1480 1573 1.135402 GCAGTCAAAATACCTTGGCCG 60.135 52.381 0.00 0.00 30.95 6.13
1481 1574 2.094545 CAGCAGTCAAAATACCTTGGCC 60.095 50.000 0.00 0.00 30.95 5.36
1482 1575 2.672195 GCAGCAGTCAAAATACCTTGGC 60.672 50.000 0.00 0.00 0.00 4.52
1483 1576 2.094545 GGCAGCAGTCAAAATACCTTGG 60.095 50.000 0.00 0.00 0.00 3.61
1484 1577 2.821969 AGGCAGCAGTCAAAATACCTTG 59.178 45.455 0.00 0.00 0.00 3.61
1485 1578 3.160679 AGGCAGCAGTCAAAATACCTT 57.839 42.857 0.00 0.00 0.00 3.50
1486 1579 2.887151 AGGCAGCAGTCAAAATACCT 57.113 45.000 0.00 0.00 0.00 3.08
1487 1580 2.683362 GGTAGGCAGCAGTCAAAATACC 59.317 50.000 0.00 0.00 0.00 2.73
1488 1581 2.683362 GGGTAGGCAGCAGTCAAAATAC 59.317 50.000 0.00 0.00 0.00 1.89
1489 1582 2.576191 AGGGTAGGCAGCAGTCAAAATA 59.424 45.455 0.00 0.00 0.00 1.40
1572 1669 3.966026 GACGACGAGGAACCGCTGG 62.966 68.421 0.00 0.00 0.00 4.85
1638 1735 2.283529 GCCTTCCGACCAGTCCAGA 61.284 63.158 0.00 0.00 0.00 3.86
1673 1770 1.461911 GGGAGGGGAGATTACCGTCG 61.462 65.000 0.00 0.00 42.32 5.12
1675 1772 0.043637 TTGGGAGGGGAGATTACCGT 59.956 55.000 0.00 0.00 0.00 4.83
1734 1836 1.139853 CAGATCCTAGCCCAGACCAAC 59.860 57.143 0.00 0.00 0.00 3.77
1767 1869 2.612212 GCAAGAACTTGAACTCGACCAA 59.388 45.455 17.19 0.00 42.93 3.67
1845 1947 1.520666 CGTTGGAGGCCTCGGTTAT 59.479 57.895 26.36 0.00 0.00 1.89
2041 2149 1.377366 CGCGTCCAGAGAAGCTCCTA 61.377 60.000 0.00 0.00 44.32 2.94
2044 2152 2.202676 CCGCGTCCAGAGAAGCTC 60.203 66.667 4.92 0.00 44.32 4.09
2055 2163 2.736682 CCCACATCGTTTCCGCGTC 61.737 63.158 4.92 0.00 0.00 5.19
2091 2199 2.807676 GGGAATCCATTTCACCTGTGT 58.192 47.619 0.09 0.00 35.94 3.72
2137 2250 4.040217 AGCTAGGATGAAGCAGTCTTATGG 59.960 45.833 0.00 0.00 42.62 2.74
2209 2371 0.601558 CTGCTGCCATGTTTGCTCTT 59.398 50.000 0.00 0.00 0.00 2.85
2224 2386 2.723746 CTGCCGTTTTGTGCTGCT 59.276 55.556 0.00 0.00 0.00 4.24
2240 2402 2.490270 ATTCCCGCAGAAGCAAGGCT 62.490 55.000 0.00 0.00 42.56 4.58
2254 2416 0.737019 TGTCGTCGCCGTTTATTCCC 60.737 55.000 0.00 0.00 35.01 3.97
2299 2461 3.379865 GAACATCCTGGCCGGCGTA 62.380 63.158 22.54 11.42 0.00 4.42
2311 2473 5.327091 CAGACCATGTCATTTTCGAACATC 58.673 41.667 0.00 0.00 34.60 3.06
2323 2485 2.252535 TCCTCATCCAGACCATGTCA 57.747 50.000 0.00 0.00 34.60 3.58
2453 2645 6.901081 AAGGAAAAATGGTTCTCAACTAGG 57.099 37.500 0.00 0.00 0.00 3.02
2454 2646 8.413229 TGAAAAGGAAAAATGGTTCTCAACTAG 58.587 33.333 0.00 0.00 0.00 2.57
2498 2690 0.469917 TCCCGGCAATCTCATTCCTC 59.530 55.000 0.00 0.00 0.00 3.71
2539 2731 2.026590 GCAACAGTGTGCAGGTGC 59.973 61.111 0.00 0.00 44.29 5.01
2540 2732 2.723746 GGCAACAGTGTGCAGGTG 59.276 61.111 16.15 4.21 46.81 4.00
2541 2733 2.901840 CGGCAACAGTGTGCAGGT 60.902 61.111 16.15 0.00 46.81 4.00
2543 2735 1.568612 CTACCGGCAACAGTGTGCAG 61.569 60.000 0.00 12.87 46.81 4.41
2544 2736 1.596752 CTACCGGCAACAGTGTGCA 60.597 57.895 0.00 0.00 46.81 4.57
2620 2812 0.267960 GGGATGGAGGGAGGGAGTAA 59.732 60.000 0.00 0.00 0.00 2.24
2624 2816 2.727071 GGAGGGATGGAGGGAGGGA 61.727 68.421 0.00 0.00 0.00 4.20
2625 2817 2.122189 GGAGGGATGGAGGGAGGG 60.122 72.222 0.00 0.00 0.00 4.30
2628 2820 0.178816 TTTTGGGAGGGATGGAGGGA 60.179 55.000 0.00 0.00 0.00 4.20
2629 2821 0.936691 ATTTTGGGAGGGATGGAGGG 59.063 55.000 0.00 0.00 0.00 4.30
2630 2822 2.854736 AATTTTGGGAGGGATGGAGG 57.145 50.000 0.00 0.00 0.00 4.30
2631 2823 5.360999 GTCTTAAATTTTGGGAGGGATGGAG 59.639 44.000 0.00 0.00 0.00 3.86
2632 2824 5.016245 AGTCTTAAATTTTGGGAGGGATGGA 59.984 40.000 0.00 0.00 0.00 3.41
2633 2825 5.272402 AGTCTTAAATTTTGGGAGGGATGG 58.728 41.667 0.00 0.00 0.00 3.51
2634 2826 6.857437 AAGTCTTAAATTTTGGGAGGGATG 57.143 37.500 0.00 0.00 0.00 3.51
2635 2827 7.872061 AAAAGTCTTAAATTTTGGGAGGGAT 57.128 32.000 0.00 0.00 0.00 3.85
2636 2828 7.684317 AAAAAGTCTTAAATTTTGGGAGGGA 57.316 32.000 0.00 0.00 0.00 4.20
2661 2853 9.268268 CCTTGTTTGAAATAAGTACTAGTGTCA 57.732 33.333 12.38 0.00 0.00 3.58
2662 2854 9.485206 TCCTTGTTTGAAATAAGTACTAGTGTC 57.515 33.333 12.38 0.00 0.00 3.67
2663 2855 9.490379 CTCCTTGTTTGAAATAAGTACTAGTGT 57.510 33.333 12.38 0.00 0.00 3.55
2664 2856 8.443937 GCTCCTTGTTTGAAATAAGTACTAGTG 58.556 37.037 12.38 1.24 0.00 2.74
2665 2857 8.154856 TGCTCCTTGTTTGAAATAAGTACTAGT 58.845 33.333 12.38 0.00 0.00 2.57
2666 2858 8.547967 TGCTCCTTGTTTGAAATAAGTACTAG 57.452 34.615 12.38 6.39 0.00 2.57
2667 2859 8.372459 TCTGCTCCTTGTTTGAAATAAGTACTA 58.628 33.333 12.38 0.00 0.00 1.82
2668 2860 7.173390 GTCTGCTCCTTGTTTGAAATAAGTACT 59.827 37.037 12.38 0.00 0.00 2.73
2669 2861 7.173390 AGTCTGCTCCTTGTTTGAAATAAGTAC 59.827 37.037 12.38 3.55 0.00 2.73
2670 2862 7.224297 AGTCTGCTCCTTGTTTGAAATAAGTA 58.776 34.615 12.38 0.00 0.00 2.24
2671 2863 6.064717 AGTCTGCTCCTTGTTTGAAATAAGT 58.935 36.000 12.38 0.00 0.00 2.24
2672 2864 6.566197 AGTCTGCTCCTTGTTTGAAATAAG 57.434 37.500 7.35 7.35 0.00 1.73
2673 2865 6.560253 GAGTCTGCTCCTTGTTTGAAATAA 57.440 37.500 0.00 0.00 35.76 1.40
2698 2890 2.906354 ACTCATCACGGAATAGCAACC 58.094 47.619 0.00 0.00 0.00 3.77
2699 2891 5.346281 GCTATACTCATCACGGAATAGCAAC 59.654 44.000 7.15 0.00 40.80 4.17
2756 2950 8.691661 AATCGCCCTTGTTCTGTTTTATATAT 57.308 30.769 0.00 0.00 0.00 0.86
2758 2952 7.404671 AAATCGCCCTTGTTCTGTTTTATAT 57.595 32.000 0.00 0.00 0.00 0.86
2759 2953 6.402766 CGAAATCGCCCTTGTTCTGTTTTATA 60.403 38.462 0.00 0.00 0.00 0.98
2760 2954 5.619086 CGAAATCGCCCTTGTTCTGTTTTAT 60.619 40.000 0.00 0.00 0.00 1.40
2791 3002 4.637534 ACATGTTGCTAGACCATGATTGTC 59.362 41.667 18.09 0.00 38.56 3.18
2807 3018 5.513141 CACAGATAGACACGAGTACATGTTG 59.487 44.000 2.30 0.00 0.00 3.33
2828 3039 1.876799 CATTGTTCACGCCCTTACACA 59.123 47.619 0.00 0.00 0.00 3.72
2829 3040 1.199097 CCATTGTTCACGCCCTTACAC 59.801 52.381 0.00 0.00 0.00 2.90
2833 3044 0.673437 CAACCATTGTTCACGCCCTT 59.327 50.000 0.00 0.00 30.42 3.95
2865 3076 6.712095 ACGTGACGGATGTAAGATAATACCTA 59.288 38.462 10.66 0.00 0.00 3.08
2866 3077 5.533903 ACGTGACGGATGTAAGATAATACCT 59.466 40.000 10.66 0.00 0.00 3.08
2867 3078 5.766222 ACGTGACGGATGTAAGATAATACC 58.234 41.667 10.66 0.00 0.00 2.73
2876 3087 7.916977 GCCATATATATTACGTGACGGATGTAA 59.083 37.037 10.66 0.00 39.79 2.41
2880 3091 6.096423 ACTGCCATATATATTACGTGACGGAT 59.904 38.462 10.66 5.63 0.00 4.18
2883 3094 6.319399 TCACTGCCATATATATTACGTGACG 58.681 40.000 2.24 2.24 0.00 4.35
2955 3170 8.740906 CGTAGGTGATTGGTATTCATATCTAGT 58.259 37.037 0.00 0.00 0.00 2.57
2977 3192 3.184541 CCTCGTAACCATCAAACCGTAG 58.815 50.000 0.00 0.00 0.00 3.51
2978 3193 2.094078 CCCTCGTAACCATCAAACCGTA 60.094 50.000 0.00 0.00 0.00 4.02
2981 3196 2.081462 CACCCTCGTAACCATCAAACC 58.919 52.381 0.00 0.00 0.00 3.27
2982 3197 2.081462 CCACCCTCGTAACCATCAAAC 58.919 52.381 0.00 0.00 0.00 2.93
2983 3198 1.700739 ACCACCCTCGTAACCATCAAA 59.299 47.619 0.00 0.00 0.00 2.69
2985 3200 1.002659 CAACCACCCTCGTAACCATCA 59.997 52.381 0.00 0.00 0.00 3.07
2986 3201 1.002773 ACAACCACCCTCGTAACCATC 59.997 52.381 0.00 0.00 0.00 3.51
2987 3202 1.061546 ACAACCACCCTCGTAACCAT 58.938 50.000 0.00 0.00 0.00 3.55
2988 3203 1.344114 GTACAACCACCCTCGTAACCA 59.656 52.381 0.00 0.00 0.00 3.67
2989 3204 1.669795 CGTACAACCACCCTCGTAACC 60.670 57.143 0.00 0.00 0.00 2.85
2990 3205 1.701704 CGTACAACCACCCTCGTAAC 58.298 55.000 0.00 0.00 0.00 2.50
2994 3209 2.433664 GGCGTACAACCACCCTCG 60.434 66.667 0.00 0.00 0.00 4.63
3009 3224 2.208431 CAAGATCCTTGATGAGTCGGC 58.792 52.381 0.65 0.00 0.00 5.54
3013 3228 4.897509 TGTGACAAGATCCTTGATGAGT 57.102 40.909 13.00 0.00 0.00 3.41
3014 3229 5.183969 ACATGTGACAAGATCCTTGATGAG 58.816 41.667 13.00 1.87 0.00 2.90
3023 3238 7.915923 TCTTTACGAGATACATGTGACAAGATC 59.084 37.037 9.11 2.05 0.00 2.75
3024 3239 7.702772 GTCTTTACGAGATACATGTGACAAGAT 59.297 37.037 9.11 0.00 36.61 2.40
3027 3242 6.097356 GGTCTTTACGAGATACATGTGACAA 58.903 40.000 9.11 0.00 36.61 3.18
3028 3243 5.184287 TGGTCTTTACGAGATACATGTGACA 59.816 40.000 9.11 0.00 36.61 3.58
3029 3244 5.647589 TGGTCTTTACGAGATACATGTGAC 58.352 41.667 9.11 2.86 36.61 3.67
3030 3245 5.907866 TGGTCTTTACGAGATACATGTGA 57.092 39.130 9.11 0.00 36.61 3.58
3031 3246 6.961359 TTTGGTCTTTACGAGATACATGTG 57.039 37.500 9.11 0.00 36.61 3.21
3032 3247 9.832445 AATATTTGGTCTTTACGAGATACATGT 57.168 29.630 2.69 2.69 36.61 3.21
3038 3266 9.226606 TGAAACAATATTTGGTCTTTACGAGAT 57.773 29.630 0.00 0.00 36.61 2.75
3049 3277 9.787532 CGTCATAGATTTGAAACAATATTTGGT 57.212 29.630 0.00 0.00 34.12 3.67
3070 3298 8.200120 TCTTGAGATTAATGAAGTCATCGTCAT 58.800 33.333 0.00 0.00 42.66 3.06
3071 3299 7.489435 GTCTTGAGATTAATGAAGTCATCGTCA 59.511 37.037 0.00 0.00 35.10 4.35
3072 3300 7.704472 AGTCTTGAGATTAATGAAGTCATCGTC 59.296 37.037 0.00 0.00 35.10 4.20
3073 3301 7.551585 AGTCTTGAGATTAATGAAGTCATCGT 58.448 34.615 0.00 0.00 35.10 3.73
3074 3302 8.326713 CAAGTCTTGAGATTAATGAAGTCATCG 58.673 37.037 6.76 0.00 35.10 3.84
3075 3303 9.160496 ACAAGTCTTGAGATTAATGAAGTCATC 57.840 33.333 19.53 0.00 35.10 2.92
3076 3304 9.160496 GACAAGTCTTGAGATTAATGAAGTCAT 57.840 33.333 19.53 0.00 38.41 3.06
3077 3305 8.150296 TGACAAGTCTTGAGATTAATGAAGTCA 58.850 33.333 19.53 4.80 0.00 3.41
3078 3306 8.539770 TGACAAGTCTTGAGATTAATGAAGTC 57.460 34.615 19.53 2.27 0.00 3.01
3079 3307 8.778358 GTTGACAAGTCTTGAGATTAATGAAGT 58.222 33.333 19.53 0.00 0.00 3.01
3080 3308 8.997323 AGTTGACAAGTCTTGAGATTAATGAAG 58.003 33.333 19.53 0.00 0.00 3.02
3081 3309 8.908786 AGTTGACAAGTCTTGAGATTAATGAA 57.091 30.769 19.53 0.00 0.00 2.57
3082 3310 8.150296 TGAGTTGACAAGTCTTGAGATTAATGA 58.850 33.333 19.53 0.00 0.00 2.57
3083 3311 8.315391 TGAGTTGACAAGTCTTGAGATTAATG 57.685 34.615 19.53 0.00 0.00 1.90
3084 3312 8.153550 ACTGAGTTGACAAGTCTTGAGATTAAT 58.846 33.333 19.53 0.00 0.00 1.40
3085 3313 7.500992 ACTGAGTTGACAAGTCTTGAGATTAA 58.499 34.615 19.53 4.11 0.00 1.40
3086 3314 7.014711 AGACTGAGTTGACAAGTCTTGAGATTA 59.985 37.037 19.53 0.98 36.57 1.75
3087 3315 5.923204 ACTGAGTTGACAAGTCTTGAGATT 58.077 37.500 19.53 0.00 0.00 2.40
3088 3316 5.304101 AGACTGAGTTGACAAGTCTTGAGAT 59.696 40.000 19.53 0.00 36.57 2.75
3089 3317 4.646945 AGACTGAGTTGACAAGTCTTGAGA 59.353 41.667 19.53 2.10 36.57 3.27
3090 3318 4.942852 AGACTGAGTTGACAAGTCTTGAG 58.057 43.478 19.53 13.69 36.57 3.02
3091 3319 5.344743 AAGACTGAGTTGACAAGTCTTGA 57.655 39.130 19.53 3.52 44.85 3.02
3093 3321 5.344743 TCAAGACTGAGTTGACAAGTCTT 57.655 39.130 20.88 16.58 46.71 3.01
3094 3322 5.344743 TTCAAGACTGAGTTGACAAGTCT 57.655 39.130 20.88 12.06 41.03 3.24
3095 3323 6.422776 TTTTCAAGACTGAGTTGACAAGTC 57.577 37.500 14.97 14.97 33.63 3.01
3096 3324 7.770897 AGTATTTTCAAGACTGAGTTGACAAGT 59.229 33.333 0.00 0.00 33.63 3.16
3097 3325 8.147642 AGTATTTTCAAGACTGAGTTGACAAG 57.852 34.615 0.00 0.00 33.63 3.16
3098 3326 7.768582 TGAGTATTTTCAAGACTGAGTTGACAA 59.231 33.333 0.00 0.00 33.63 3.18
3099 3327 7.272244 TGAGTATTTTCAAGACTGAGTTGACA 58.728 34.615 0.00 0.00 33.63 3.58
3100 3328 7.715265 TGAGTATTTTCAAGACTGAGTTGAC 57.285 36.000 0.00 0.00 33.63 3.18
3101 3329 9.645059 CTATGAGTATTTTCAAGACTGAGTTGA 57.355 33.333 0.00 0.00 31.69 3.18
3102 3330 9.645059 TCTATGAGTATTTTCAAGACTGAGTTG 57.355 33.333 0.00 0.00 31.69 3.16
3103 3331 9.868277 CTCTATGAGTATTTTCAAGACTGAGTT 57.132 33.333 0.00 0.00 31.69 3.01
3104 3332 9.249053 TCTCTATGAGTATTTTCAAGACTGAGT 57.751 33.333 0.00 0.00 31.69 3.41
3136 3364 9.104965 CCGTCAAATATCCTTATAAAAGACACA 57.895 33.333 0.00 0.00 34.37 3.72
3137 3365 9.106070 ACCGTCAAATATCCTTATAAAAGACAC 57.894 33.333 0.00 0.00 34.37 3.67
3138 3366 9.104965 CACCGTCAAATATCCTTATAAAAGACA 57.895 33.333 0.00 0.00 34.37 3.41
3139 3367 9.321562 TCACCGTCAAATATCCTTATAAAAGAC 57.678 33.333 0.00 0.00 34.37 3.01
3140 3368 9.321562 GTCACCGTCAAATATCCTTATAAAAGA 57.678 33.333 0.00 0.00 34.37 2.52
3141 3369 9.326413 AGTCACCGTCAAATATCCTTATAAAAG 57.674 33.333 0.00 0.00 0.00 2.27
3142 3370 9.675464 AAGTCACCGTCAAATATCCTTATAAAA 57.325 29.630 0.00 0.00 0.00 1.52
3143 3371 9.321562 GAAGTCACCGTCAAATATCCTTATAAA 57.678 33.333 0.00 0.00 0.00 1.40
3144 3372 8.479689 TGAAGTCACCGTCAAATATCCTTATAA 58.520 33.333 0.00 0.00 0.00 0.98
3145 3373 8.014070 TGAAGTCACCGTCAAATATCCTTATA 57.986 34.615 0.00 0.00 0.00 0.98
3146 3374 6.884832 TGAAGTCACCGTCAAATATCCTTAT 58.115 36.000 0.00 0.00 0.00 1.73
3147 3375 6.288941 TGAAGTCACCGTCAAATATCCTTA 57.711 37.500 0.00 0.00 0.00 2.69
3148 3376 5.160607 TGAAGTCACCGTCAAATATCCTT 57.839 39.130 0.00 0.00 0.00 3.36
3149 3377 4.819105 TGAAGTCACCGTCAAATATCCT 57.181 40.909 0.00 0.00 0.00 3.24
3150 3378 7.548196 TTAATGAAGTCACCGTCAAATATCC 57.452 36.000 0.00 0.00 32.76 2.59
3151 3379 9.046296 AGATTAATGAAGTCACCGTCAAATATC 57.954 33.333 0.00 0.00 32.76 1.63
3152 3380 8.964476 AGATTAATGAAGTCACCGTCAAATAT 57.036 30.769 0.00 0.00 32.76 1.28
3153 3381 8.038351 TGAGATTAATGAAGTCACCGTCAAATA 58.962 33.333 0.00 0.00 32.76 1.40
3154 3382 6.878923 TGAGATTAATGAAGTCACCGTCAAAT 59.121 34.615 0.00 0.00 32.76 2.32
3155 3383 6.227522 TGAGATTAATGAAGTCACCGTCAAA 58.772 36.000 0.00 0.00 32.76 2.69
3156 3384 5.789521 TGAGATTAATGAAGTCACCGTCAA 58.210 37.500 0.00 0.00 32.76 3.18
3157 3385 5.400066 TGAGATTAATGAAGTCACCGTCA 57.600 39.130 0.00 0.00 33.56 4.35
3158 3386 6.035112 GTCTTGAGATTAATGAAGTCACCGTC 59.965 42.308 0.00 0.00 0.00 4.79
3159 3387 5.869888 GTCTTGAGATTAATGAAGTCACCGT 59.130 40.000 0.00 0.00 0.00 4.83
3160 3388 6.102663 AGTCTTGAGATTAATGAAGTCACCG 58.897 40.000 0.00 0.00 0.00 4.94
3172 3400 7.055667 ACTGAGTTGACAAGTCTTGAGATTA 57.944 36.000 19.53 0.98 0.00 1.75
3176 3404 3.733224 CGACTGAGTTGACAAGTCTTGAG 59.267 47.826 19.53 13.69 0.00 3.02
3207 3435 9.821240 ATCTCTATGAGTCATACACTAATCCTT 57.179 33.333 8.84 0.00 34.41 3.36
3214 3442 9.806448 ACATTCTATCTCTATGAGTCATACACT 57.194 33.333 8.84 0.00 38.45 3.55
3215 3443 9.838975 CACATTCTATCTCTATGAGTCATACAC 57.161 37.037 8.84 0.00 0.00 2.90
3216 3444 9.579932 ACACATTCTATCTCTATGAGTCATACA 57.420 33.333 8.84 0.00 0.00 2.29
3243 3471 9.675464 AGTCACCGTCAAATATCCTTATAAAAA 57.325 29.630 0.00 0.00 0.00 1.94
3244 3472 9.675464 AAGTCACCGTCAAATATCCTTATAAAA 57.325 29.630 0.00 0.00 0.00 1.52
3245 3473 9.321562 GAAGTCACCGTCAAATATCCTTATAAA 57.678 33.333 0.00 0.00 0.00 1.40
3246 3474 8.479689 TGAAGTCACCGTCAAATATCCTTATAA 58.520 33.333 0.00 0.00 0.00 0.98
3247 3475 8.014070 TGAAGTCACCGTCAAATATCCTTATA 57.986 34.615 0.00 0.00 0.00 0.98
3248 3476 6.884832 TGAAGTCACCGTCAAATATCCTTAT 58.115 36.000 0.00 0.00 0.00 1.73
3249 3477 6.288941 TGAAGTCACCGTCAAATATCCTTA 57.711 37.500 0.00 0.00 0.00 2.69
3250 3478 5.160607 TGAAGTCACCGTCAAATATCCTT 57.839 39.130 0.00 0.00 0.00 3.36
3251 3479 4.819105 TGAAGTCACCGTCAAATATCCT 57.181 40.909 0.00 0.00 0.00 3.24
3252 3480 7.548196 TTAATGAAGTCACCGTCAAATATCC 57.452 36.000 0.00 0.00 32.76 2.59
3253 3481 9.046296 AGATTAATGAAGTCACCGTCAAATATC 57.954 33.333 0.00 0.00 32.76 1.63
3254 3482 8.964476 AGATTAATGAAGTCACCGTCAAATAT 57.036 30.769 0.00 0.00 32.76 1.28
3255 3483 8.038351 TGAGATTAATGAAGTCACCGTCAAATA 58.962 33.333 0.00 0.00 32.76 1.40
3256 3484 6.878923 TGAGATTAATGAAGTCACCGTCAAAT 59.121 34.615 0.00 0.00 32.76 2.32
3257 3485 6.227522 TGAGATTAATGAAGTCACCGTCAAA 58.772 36.000 0.00 0.00 32.76 2.69
3258 3486 5.789521 TGAGATTAATGAAGTCACCGTCAA 58.210 37.500 0.00 0.00 32.76 3.18
3259 3487 5.400066 TGAGATTAATGAAGTCACCGTCA 57.600 39.130 0.00 0.00 33.56 4.35
3260 3488 6.035112 GTCTTGAGATTAATGAAGTCACCGTC 59.965 42.308 0.00 0.00 0.00 4.79
3261 3489 5.869888 GTCTTGAGATTAATGAAGTCACCGT 59.130 40.000 0.00 0.00 0.00 4.83
3262 3490 6.102663 AGTCTTGAGATTAATGAAGTCACCG 58.897 40.000 0.00 0.00 0.00 4.94
3263 3491 7.389053 ACAAGTCTTGAGATTAATGAAGTCACC 59.611 37.037 19.53 0.00 0.00 4.02
3264 3492 8.316640 ACAAGTCTTGAGATTAATGAAGTCAC 57.683 34.615 19.53 0.00 0.00 3.67
3265 3493 8.150296 TGACAAGTCTTGAGATTAATGAAGTCA 58.850 33.333 19.53 4.80 0.00 3.41
3266 3494 8.539770 TGACAAGTCTTGAGATTAATGAAGTC 57.460 34.615 19.53 2.27 0.00 3.01
3267 3495 8.778358 GTTGACAAGTCTTGAGATTAATGAAGT 58.222 33.333 19.53 0.00 0.00 3.01
3268 3496 8.997323 AGTTGACAAGTCTTGAGATTAATGAAG 58.003 33.333 19.53 0.00 0.00 3.02
3269 3497 8.908786 AGTTGACAAGTCTTGAGATTAATGAA 57.091 30.769 19.53 0.00 0.00 2.57
3270 3498 8.150296 TGAGTTGACAAGTCTTGAGATTAATGA 58.850 33.333 19.53 0.00 0.00 2.57
3271 3499 8.315391 TGAGTTGACAAGTCTTGAGATTAATG 57.685 34.615 19.53 0.00 0.00 1.90
3272 3500 8.153550 ACTGAGTTGACAAGTCTTGAGATTAAT 58.846 33.333 19.53 0.00 0.00 1.40
3273 3501 7.500992 ACTGAGTTGACAAGTCTTGAGATTAA 58.499 34.615 19.53 4.11 0.00 1.40
3274 3502 7.055667 ACTGAGTTGACAAGTCTTGAGATTA 57.944 36.000 19.53 0.98 0.00 1.75
3275 3503 5.923204 ACTGAGTTGACAAGTCTTGAGATT 58.077 37.500 19.53 0.00 0.00 2.40
3276 3504 5.537188 GACTGAGTTGACAAGTCTTGAGAT 58.463 41.667 19.53 0.00 0.00 2.75
3277 3505 4.498177 CGACTGAGTTGACAAGTCTTGAGA 60.498 45.833 19.53 2.10 0.00 3.27
3278 3506 3.733224 CGACTGAGTTGACAAGTCTTGAG 59.267 47.826 19.53 13.69 0.00 3.02
3279 3507 3.130516 ACGACTGAGTTGACAAGTCTTGA 59.869 43.478 19.53 3.52 0.00 3.02
3280 3508 3.448686 ACGACTGAGTTGACAAGTCTTG 58.551 45.455 20.88 11.17 0.00 3.02
3281 3509 3.802948 ACGACTGAGTTGACAAGTCTT 57.197 42.857 20.88 10.14 0.00 3.01
3282 3510 3.802948 AACGACTGAGTTGACAAGTCT 57.197 42.857 20.88 4.76 32.39 3.24
3283 3511 4.859629 AAAACGACTGAGTTGACAAGTC 57.140 40.909 14.97 14.97 34.14 3.01
3302 3530 9.386010 ACGCACATACACTAATCCTTATAAAAA 57.614 29.630 0.00 0.00 0.00 1.94
3303 3531 8.822855 CACGCACATACACTAATCCTTATAAAA 58.177 33.333 0.00 0.00 0.00 1.52
3304 3532 7.982919 ACACGCACATACACTAATCCTTATAAA 59.017 33.333 0.00 0.00 0.00 1.40
3305 3533 7.494211 ACACGCACATACACTAATCCTTATAA 58.506 34.615 0.00 0.00 0.00 0.98
3306 3534 7.046292 ACACGCACATACACTAATCCTTATA 57.954 36.000 0.00 0.00 0.00 0.98
3307 3535 5.914033 ACACGCACATACACTAATCCTTAT 58.086 37.500 0.00 0.00 0.00 1.73
3308 3536 5.333299 ACACGCACATACACTAATCCTTA 57.667 39.130 0.00 0.00 0.00 2.69
3309 3537 4.202245 ACACGCACATACACTAATCCTT 57.798 40.909 0.00 0.00 0.00 3.36
3310 3538 3.887621 ACACGCACATACACTAATCCT 57.112 42.857 0.00 0.00 0.00 3.24
3311 3539 4.084537 GCATACACGCACATACACTAATCC 60.085 45.833 0.00 0.00 0.00 3.01
3312 3540 4.745125 AGCATACACGCACATACACTAATC 59.255 41.667 0.00 0.00 0.00 1.75
3313 3541 4.693283 AGCATACACGCACATACACTAAT 58.307 39.130 0.00 0.00 0.00 1.73
3314 3542 4.118093 AGCATACACGCACATACACTAA 57.882 40.909 0.00 0.00 0.00 2.24
3315 3543 3.793797 AGCATACACGCACATACACTA 57.206 42.857 0.00 0.00 0.00 2.74
3316 3544 2.672961 AGCATACACGCACATACACT 57.327 45.000 0.00 0.00 0.00 3.55
3317 3545 2.218759 GCTAGCATACACGCACATACAC 59.781 50.000 10.63 0.00 0.00 2.90
3318 3546 2.469826 GCTAGCATACACGCACATACA 58.530 47.619 10.63 0.00 0.00 2.29
3319 3547 1.452025 CGCTAGCATACACGCACATAC 59.548 52.381 16.45 0.00 0.00 2.39
3320 3548 1.066454 ACGCTAGCATACACGCACATA 59.934 47.619 16.45 0.00 0.00 2.29
3321 3549 0.179111 ACGCTAGCATACACGCACAT 60.179 50.000 16.45 0.00 0.00 3.21
3322 3550 0.389296 AACGCTAGCATACACGCACA 60.389 50.000 16.45 0.00 0.00 4.57
3323 3551 0.719465 AAACGCTAGCATACACGCAC 59.281 50.000 16.45 0.00 0.00 5.34
3324 3552 0.718904 CAAACGCTAGCATACACGCA 59.281 50.000 16.45 0.00 0.00 5.24
3325 3553 0.719465 ACAAACGCTAGCATACACGC 59.281 50.000 16.45 0.00 0.00 5.34
3326 3554 3.176708 AGTACAAACGCTAGCATACACG 58.823 45.455 16.45 0.00 0.00 4.49
3327 3555 5.332355 GCATAGTACAAACGCTAGCATACAC 60.332 44.000 16.45 4.42 0.00 2.90
3328 3556 4.743151 GCATAGTACAAACGCTAGCATACA 59.257 41.667 16.45 1.43 0.00 2.29
3329 3557 4.982916 AGCATAGTACAAACGCTAGCATAC 59.017 41.667 16.45 8.49 0.00 2.39
3330 3558 5.196341 AGCATAGTACAAACGCTAGCATA 57.804 39.130 16.45 0.00 0.00 3.14
3331 3559 4.060038 AGCATAGTACAAACGCTAGCAT 57.940 40.909 16.45 0.00 0.00 3.79
3332 3560 3.520290 AGCATAGTACAAACGCTAGCA 57.480 42.857 16.45 0.00 0.00 3.49
3333 3561 4.113354 AGAAGCATAGTACAAACGCTAGC 58.887 43.478 4.06 4.06 31.36 3.42
3334 3562 7.751047 TTTAGAAGCATAGTACAAACGCTAG 57.249 36.000 0.00 0.00 31.36 3.42
3335 3563 8.030692 TCTTTTAGAAGCATAGTACAAACGCTA 58.969 33.333 0.00 0.00 32.75 4.26
3336 3564 6.872020 TCTTTTAGAAGCATAGTACAAACGCT 59.128 34.615 0.00 0.00 32.75 5.07
3337 3565 7.057149 TCTTTTAGAAGCATAGTACAAACGC 57.943 36.000 0.00 0.00 32.75 4.84
3338 3566 9.872757 TTTTCTTTTAGAAGCATAGTACAAACG 57.127 29.630 0.00 0.00 35.37 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.